BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780131|ref|YP_003064544.1| DNA ligase, NAD-dependent [Candidatus Liberibacter asiaticus str. psy62] (119 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done Results from round 1 >gi|254780131|ref|YP_003064544.1| DNA ligase, NAD-dependent [Candidatus Liberibacter asiaticus str. psy62] gi|254039808|gb|ACT56604.1| DNA ligase, NAD-dependent [Candidatus Liberibacter asiaticus str. psy62] gi|317120701|gb|ADV02524.1| DNA ligase [Liberibacter phage SC1] gi|317120744|gb|ADV02566.1| DNA ligase [Liberibacter phage SC2] gi|317120758|gb|ADV02579.1| DNA ligase [Liberibacter phage SC2] gi|317120805|gb|ADV02626.1| DNA ligase [Liberibacter phage SC1] gi|317120845|gb|ADV02666.1| DNA ligase [Candidatus Liberibacter asiaticus] Length = 119 Score = 247 bits (630), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 119/119 (100%), Positives = 119/119 (100%) Query: 1 MYNFDRVFRSSKFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAM 60 MYNFDRVFRSSKFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAM Sbjct: 1 MYNFDRVFRSSKFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAM 60 Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY Sbjct: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 >gi|254781196|ref|YP_003065609.1| DNA ligase, NAD-dependent [Candidatus Liberibacter asiaticus str. psy62] gi|254040873|gb|ACT57669.1| DNA ligase, NAD-dependent [Candidatus Liberibacter asiaticus str. psy62] Length = 119 Score = 245 bits (626), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 118/119 (99%), Positives = 119/119 (100%) Query: 1 MYNFDRVFRSSKFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAM 60 MYNFDRVFRSSKFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAM Sbjct: 1 MYNFDRVFRSSKFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAM 60 Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 IEVEYLVKIALHHQKWYYRLD+PLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY Sbjct: 61 IEVEYLVKIALHHQKWYYRLDNPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 >gi|315121970|ref|YP_004062459.1| DNA ligase, NAD-dependent [Candidatus Liberibacter solanacearum CLso-ZC1] gi|315122938|ref|YP_004063427.1| DNA ligase, NAD-dependent [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495372|gb|ADR51971.1| DNA ligase, NAD-dependent [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496340|gb|ADR52939.1| DNA ligase, NAD-dependent [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 127 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/100 (51%), Positives = 62/100 (62%), Gaps = 4/100 (4%) Query: 23 QWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDD 82 Q K LL EAKFLP R L ++ K V+ LS EA+IE EYL KI LHH++WYYRL D Sbjct: 29 QLKSLLKFEAKFLPTPRQLLKIINDFKPVSQLSFWEALIETEYLTKIVLHHRRWYYRLSD 88 Query: 83 --PLFTDGLYDRVSERLDALQEQFPELFDEDHP-WNTVGY 119 PL D YD++ R+ L E FPEL+ HP + VGY Sbjct: 89 ETPLL-DADYDKIEIRIIKLAEHFPELYSLAHPIISEVGY 127 >gi|299131914|ref|ZP_07025109.1| DNA ligase, NAD-dependent [Afipia sp. 1NLS2] gi|298592051|gb|EFI52251.1| DNA ligase, NAD-dependent [Afipia sp. 1NLS2] Length = 706 Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 6/77 (7%) Query: 47 KAKK----VTSLSKGEAMIEVEYL-VKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQ 101 KAKK V +L+K +A +E+ L ++I++H ++ YY+ D P +D YD++ +RL A++ Sbjct: 4 KAKKAVTPVENLTKAQAKVELTRLALEISMHDER-YYQKDAPTVSDADYDKLRQRLSAIE 62 Query: 102 EQFPELFDEDHPWNTVG 118 E+FPEL +D P VG Sbjct: 63 ERFPELVAKDSPSQKVG 79 >gi|209550159|ref|YP_002282076.1| NAD-dependent DNA ligase LigA [Rhizobium leguminosarum bv. trifolii WSM2304] gi|254781399|sp|B5ZWH9|DNLJ_RHILW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|209535915|gb|ACI55850.1| DNA ligase, NAD-dependent [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 718 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 30/68 (44%), Positives = 37/68 (54%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L+ EA E+E L K HH Y+ D P +D YD + R DAL+ QFPEL E Sbjct: 8 VDTLTIEEAAAELERLAKEIAHHDALYHGKDRPQISDADYDALKRRNDALEVQFPELIRE 67 Query: 111 DHPWNTVG 118 D P VG Sbjct: 68 DSPSRRVG 75 >gi|90418183|ref|ZP_01226095.1| DNA ligase [Aurantimonas manganoxydans SI85-9A1] gi|90337855|gb|EAS51506.1| DNA ligase [Aurantimonas manganoxydans SI85-9A1] Length = 703 Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 37/70 (52%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K V +L + EA E+E L H + YYR D P TD YD + R A++ +FPEL Sbjct: 4 KAVETLDRDEAAAELERLAGEIAAHDRAYYREDAPTVTDAEYDTLRRRNAAIEARFPELI 63 Query: 109 DEDHPWNTVG 118 ED P VG Sbjct: 64 REDSPSARVG 73 >gi|190892570|ref|YP_001979112.1| DNA ligase (NAD+) protein [Rhizobium etli CIAT 652] gi|254781398|sp|B3PTU7|DNLJ_RHIE6 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190697849|gb|ACE91934.1| DNA ligase (NAD+) protein [Rhizobium etli CIAT 652] Length = 718 Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 37/68 (54%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L+ EA E+E L K HH Y+ D P +D YD + R DAL+ +FPEL E Sbjct: 8 VDTLTIEEAAAELERLAKEIAHHDALYHGKDQPEISDADYDALKRRNDALEARFPELIRE 67 Query: 111 DHPWNTVG 118 D P VG Sbjct: 68 DSPSRHVG 75 >gi|218515813|ref|ZP_03512653.1| NAD-dependent DNA ligase LigA [Rhizobium etli 8C-3] Length = 216 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 38/72 (52%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 + V +L+ EA E+E L K HH Y+ D P +D YD + R DAL+ +FPE Sbjct: 4 EGSAVDTLTIEEAAAELERLAKEIAHHDALYHGKDQPEISDADYDALKRRNDALEARFPE 63 Query: 107 LFDEDHPWNTVG 118 L ED P VG Sbjct: 64 LIREDSPSRHVG 75 >gi|327194610|gb|EGE61460.1| DNA ligase (NAD+) protein [Rhizobium etli CNPAF512] Length = 718 Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 37/68 (54%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L+ EA E+E L K HH Y+ D P +D YD + R DAL+ +FPEL E Sbjct: 8 VDTLTIEEAAAELERLAKEIAHHDSLYHGKDQPEISDADYDALKRRNDALEVRFPELIRE 67 Query: 111 DHPWNTVG 118 D P VG Sbjct: 68 DSPSRHVG 75 >gi|316933200|ref|YP_004108182.1| NAD-dependent DNA ligase [Rhodopseudomonas palustris DX-1] gi|315600914|gb|ADU43449.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris DX-1] Length = 715 Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 42/73 (57%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 + A + +L+K +A +E+ L + H K YY+ D P +D YD + RL+A++++FP Sbjct: 6 NPAPDIATLTKAKAKVELMRLRLVIEGHDKAYYQDDAPKISDADYDALRRRLEAIEQKFP 65 Query: 106 ELFDEDHPWNTVG 118 EL P TVG Sbjct: 66 ELVSASSPTQTVG 78 >gi|322437173|ref|YP_004219385.1| DNA ligase, NAD-dependent [Acidobacterium sp. MP5ACTX9] gi|321164900|gb|ADW70605.1| DNA ligase, NAD-dependent [Acidobacterium sp. MP5ACTX9] Length = 704 Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 36/65 (55%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SKG +V+ L + HH+ YY +D P TDG YD + RL AL+ + PE+ D P Sbjct: 1 MSKGSVEEQVKELREQLEHHEHLYYVMDTPELTDGQYDSLMNRLKALEAEHPEMVTSDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|241205543|ref|YP_002976639.1| NAD-dependent DNA ligase LigA [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859433|gb|ACS57100.1| DNA ligase, NAD-dependent [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 718 Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 39/72 (54%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 ++ V +L+ EA E+E L K HH Y+ D P +D YD + R DAL+ +FPE Sbjct: 4 ESSAVDTLTIEEAAAELERLAKEIAHHDALYHGKDRPEISDADYDALKRRNDALEVRFPE 63 Query: 107 LFDEDHPWNTVG 118 L ED P VG Sbjct: 64 LIREDSPSRHVG 75 >gi|218678588|ref|ZP_03526485.1| NAD-dependent DNA ligase LigA [Rhizobium etli CIAT 894] Length = 264 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 38/72 (52%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 + V +L+ EA E+E L K HH Y+ D P +D YD + R DAL+ +FPE Sbjct: 4 EGSAVDTLTIEEAAAELERLAKEIAHHDALYHGKDQPEISDADYDALKRRNDALEVRFPE 63 Query: 107 LFDEDHPWNTVG 118 L ED P VG Sbjct: 64 LIREDSPSRRVG 75 >gi|218460243|ref|ZP_03500334.1| NAD-dependent DNA ligase LigA [Rhizobium etli Kim 5] Length = 327 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 38/72 (52%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 + V +L+ EA E+E L K HH Y+ D P +D YD + R DAL+ +FPE Sbjct: 4 EGSAVDTLTIEEAAAELERLAKEIAHHDALYHGKDQPEISDADYDALKRRNDALEARFPE 63 Query: 107 LFDEDHPWNTVG 118 L ED P VG Sbjct: 64 LIREDSPSRHVG 75 >gi|86358438|ref|YP_470330.1| NAD-dependent DNA ligase LigA [Rhizobium etli CFN 42] gi|123738303|sp|Q2K6D3|DNLJ_RHIEC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|86282540|gb|ABC91603.1| DNA ligase (NAD+) protein [Rhizobium etli CFN 42] Length = 718 Score = 54.7 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 37/68 (54%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L+ EA E+E L + HH Y+ D P +D YD + R DAL+ +FPEL E Sbjct: 8 VETLTIEEAAAELERLAREIAHHDALYHGKDQPEISDADYDALKRRNDALEARFPELIRE 67 Query: 111 DHPWNTVG 118 D P VG Sbjct: 68 DSPSRRVG 75 >gi|146342488|ref|YP_001207536.1| DNA ligase [Bradyrhizobium sp. ORS278] gi|166215400|sp|A4YZJ3|DNLJ_BRASO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|146195294|emb|CAL79319.1| DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) [Bradyrhizobium sp. ORS278] Length = 716 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 38/68 (55%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L+K +A +E + L H + YY+ D P +D YD + R +A++++FPEL Sbjct: 13 VADLTKAQAKVEWKRLALELETHDRLYYQEDAPKISDAAYDELRRRFNAIEKRFPELVSR 72 Query: 111 DHPWNTVG 118 D P TVG Sbjct: 73 DSPSQTVG 80 >gi|209884394|ref|YP_002288251.1| DNA ligase, NAD-dependent [Oligotropha carboxidovorans OM5] gi|254781382|sp|B6JB45|DNLJ_OLICO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|209872590|gb|ACI92386.1| DNA ligase, NAD-dependent [Oligotropha carboxidovorans OM5] Length = 706 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 6/77 (7%) Query: 47 KAKK----VTSLSKGEAMIEVEYL-VKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQ 101 K+KK V L+K +A +E + L ++IA+H ++ YY+ D P +D YD + +RL+A++ Sbjct: 4 KSKKPLPSVDQLTKAQAKVEHKRLALEIAMHDER-YYQKDAPTVSDAAYDSLRQRLNAVE 62 Query: 102 EQFPELFDEDHPWNTVG 118 +FPEL D P VG Sbjct: 63 ARFPELVTTDSPSQKVG 79 >gi|209963935|ref|YP_002296850.1| DNA ligase, NAD-dependent [Rhodospirillum centenum SW] gi|254781401|sp|B6IRF1|DNLJ_RHOCS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|209957401|gb|ACI98037.1| DNA ligase, NAD-dependent [Rhodospirillum centenum SW] Length = 719 Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 35/68 (51%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L+ +A E LV+ HH+ YY D P D YD + RL L+ +FPEL Sbjct: 12 VETLTLDQAAAEHAALVREIAHHRALYYGKDAPEIADSAYDALEHRLAGLEARFPELVTP 71 Query: 111 DHPWNTVG 118 D P TVG Sbjct: 72 DSPTQTVG 79 >gi|83858905|ref|ZP_00952427.1| NAD-dependent DNA ligase [Oceanicaulis alexandrii HTCC2633] gi|83853728|gb|EAP91580.1| NAD-dependent DNA ligase [Oceanicaulis alexandrii HTCC2633] Length = 695 Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 38/70 (54%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K V +L+ EA E+E L + H K YY D P +D YD + R A++ +FPEL Sbjct: 6 KDVNALTSDEAASELERLAREISRHDKAYYEKDAPKISDAAYDALRARNSAIEARFPELK 65 Query: 109 DEDHPWNTVG 118 +D P + VG Sbjct: 66 RKDSPSDRVG 75 >gi|92116846|ref|YP_576575.1| DNA ligase, NAD-dependent [Nitrobacter hamburgensis X14] gi|123083742|sp|Q1QNT2|DNLJ_NITHX RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|91799740|gb|ABE62115.1| DNA ligase, NAD-dependent [Nitrobacter hamburgensis X14] Length = 714 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 40/68 (58%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V SL++ +A IE + L H + YY+ D P +D YD + +RL+A++ +FP+L Sbjct: 11 VDSLTRAQAKIEHKRLALEIETHNERYYQKDAPTVSDAAYDALRQRLEAIEARFPDLITA 70 Query: 111 DHPWNTVG 118 + P TVG Sbjct: 71 NSPTQTVG 78 >gi|85708859|ref|ZP_01039925.1| DNA ligase [Erythrobacter sp. NAP1] gi|85690393|gb|EAQ30396.1| DNA ligase [Erythrobacter sp. NAP1] Length = 698 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 41/78 (52%) Query: 42 ESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQ 101 ES A V+ +S+ +A E+ L K HH + Y+ DDP +D YD + R L+ Sbjct: 5 ESAEVSANPVSQMSEADAANELMRLAKQIAHHDRLYHADDDPEISDQEYDALVRRNRELE 64 Query: 102 EQFPELFDEDHPWNTVGY 119 E FP+L ED P VG+ Sbjct: 65 EAFPQLVREDSPSKRVGH 82 >gi|254470147|ref|ZP_05083551.1| DNA ligase, NAD-dependent [Pseudovibrio sp. JE062] gi|211960458|gb|EEA95654.1| DNA ligase, NAD-dependent [Pseudovibrio sp. JE062] Length = 722 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 39/70 (55%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K + +L+ EA +E+E L ++ + + Y+ D P+ D YD + R AL+ +FPEL Sbjct: 9 KDIEALNAEEAALELERLARLIAEYDEAYHTQDAPIVDDATYDGLRRRNAALEAKFPELV 68 Query: 109 DEDHPWNTVG 118 D P N VG Sbjct: 69 RADSPSNRVG 78 >gi|319782858|ref|YP_004142334.1| DNA ligase, NAD-dependent [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168746|gb|ADV12284.1| DNA ligase, NAD-dependent [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 734 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 40/70 (57%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K V SLS+ EA E++ L + H + Y+ D P+ TD YD ++ R A++E+FP L Sbjct: 4 KPVDSLSESEAEAELKRLAEEIAEHDRRYHTEDAPVITDAEYDALARRNLAIEERFPALV 63 Query: 109 DEDHPWNTVG 118 ED P VG Sbjct: 64 REDSPSLRVG 73 >gi|85714986|ref|ZP_01045971.1| NAD-dependent DNA ligase [Nitrobacter sp. Nb-311A] gi|85698183|gb|EAQ36055.1| NAD-dependent DNA ligase [Nitrobacter sp. Nb-311A] Length = 705 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 39/68 (57%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V SL++ +A +E + LV H + YY+ D P +D YD + RL+A++ +FP+L Sbjct: 11 VDSLTRSQARVEHKRLVLEIEAHNERYYQQDAPTVSDAAYDAMQRRLEAIEARFPDLVTA 70 Query: 111 DHPWNTVG 118 P TVG Sbjct: 71 SSPTQTVG 78 >gi|90021526|ref|YP_527353.1| DNA ligase (NAD+) [Saccharophagus degradans 2-40] gi|123090491|sp|Q21JI8|DNLJ_SACD2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|89951126|gb|ABD81141.1| DNA ligase, NAD-dependent [Saccharophagus degradans 2-40] Length = 674 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 22/47 (46%), Positives = 29/47 (61%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H K YY LD P D YD++ + L A+++QFPEL ED P VG Sbjct: 20 YHNKLYYVLDAPELPDAEYDKLFQELQAIEQQFPELVTEDSPTQRVG 66 >gi|326573825|gb|EGE23778.1| NAD-dependent DNA ligase [Moraxella catarrhalis O35E] Length = 691 Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 38/73 (52%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D +K S + + + ++ L+K+ H YY +D P +DG YD + L L++Q P Sbjct: 10 DTSKNNPSKANDQIIAQMRALIKLLKRHNHAYYVMDAPTISDGEYDGLRRTLMMLEQQHP 69 Query: 106 ELFDEDHPWNTVG 118 L D P NTVG Sbjct: 70 NLIQPDSPINTVG 82 >gi|192292401|ref|YP_001993006.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris TIE-1] gi|254781404|sp|B3QFL8|DNLJ_RHOPT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|192286150|gb|ACF02531.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris TIE-1] Length = 715 Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 41/71 (57%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 A + +L+K +A +E+ L H K YY+ D P +D YD + RL+A++++FPEL Sbjct: 8 APDIATLTKPKAKVELMRLRLEIEGHDKAYYQDDAPKISDADYDALRRRLEAIEQKFPEL 67 Query: 108 FDEDHPWNTVG 118 + P TVG Sbjct: 68 VNASSPTQTVG 78 >gi|166216284|sp|Q6N423|DNLJ_RHOPA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 715 Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 41/71 (57%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 A + +L+K +A +E+ L H K YY+ D P +D YD + RL+A++++FPEL Sbjct: 8 APDIATLTKPKAKVELMRLRLEIEGHDKAYYQDDAPKISDADYDALRRRLEAIEQKFPEL 67 Query: 108 FDEDHPWNTVG 118 + P TVG Sbjct: 68 VNASSPTQTVG 78 >gi|320354711|ref|YP_004196050.1| NAD-dependent DNA ligase [Desulfobulbus propionicus DSM 2032] gi|320123213|gb|ADW18759.1| DNA ligase, NAD-dependent [Desulfobulbus propionicus DSM 2032] Length = 670 Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 36/65 (55%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + KG A +E L H YY LDDP+ +DG YD + L AL++++PEL D P Sbjct: 1 MDKGRAADRLEELRGQLRFHAHRYYVLDDPIISDGEYDALFRELLALEQEYPELVTADSP 60 Query: 114 WNTVG 118 + VG Sbjct: 61 SHRVG 65 >gi|27262356|gb|AAN87459.1| NAD-dependent DNA ligase [Heliobacillus mobilis] Length = 677 Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 35/61 (57%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EA + V+ L +I HH+ YY LD P TD YD + L A+++ +PEL + D P V Sbjct: 16 EAEVRVKELREIIRHHEYRYYVLDAPEITDADYDALMRELQAIEDTYPELVEADSPTRRV 75 Query: 118 G 118 G Sbjct: 76 G 76 >gi|53803401|ref|YP_114852.1| DNA ligase, NAD-dependent [Methylococcus capsulatus str. Bath] gi|81681278|sp|Q604U8|DNLJ_METCA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|53757162|gb|AAU91453.1| DNA ligase, NAD-dependent [Methylococcus capsulatus str. Bath] Length = 673 Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 23/46 (50%), Positives = 28/46 (60%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YYRLDDPL TD YDR+ L A++ ++PEL D P VG Sbjct: 21 HNVRYYRLDDPLITDAEYDRLMAELLAIEARYPELVTPDSPTQRVG 66 >gi|103486042|ref|YP_615603.1| DNA ligase, NAD-dependent [Sphingopyxis alaskensis RB2256] gi|123078573|sp|Q1GVQ2|DNLJ_SPHAL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|98976119|gb|ABF52270.1| DNA ligase, NAD-dependent [Sphingopyxis alaskensis RB2256] Length = 714 Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 36/70 (51%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K V SL++ EA E+ L K HH K Y+ D P +D YD + R A++E FP L Sbjct: 2 KDVGSLTEAEAANELMRLAKQIAHHNKLYHAEDSPEISDADYDALVRRNTAIEEAFPHLI 61 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 62 RADSPNRLVG 71 >gi|293391716|ref|ZP_06636050.1| DNA ligase, NAD-dependent [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952250|gb|EFE02369.1| DNA ligase, NAD-dependent [Aggregatibacter actinomycetemcomitans D7S-1] Length = 671 Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 33/57 (57%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K HH+ Y+ LDDP D YDR+ +L AL++Q PEL D P VG Sbjct: 8 QIDDLRKTLRHHEYQYHVLDDPQIPDSEYDRLFHQLKALEQQHPELVTADSPTQRVG 64 >gi|261868202|ref|YP_003256124.1| NAD-dependent DNA ligase LigA [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413534|gb|ACX82905.1| DNA ligase, NAD-dependent [Aggregatibacter actinomycetemcomitans D11S-1] Length = 670 Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 33/57 (57%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K HH+ Y+ LDDP D YDR+ +L AL++Q PEL D P VG Sbjct: 8 QIDDLRKTLRHHEYQYHVLDDPQIPDSEYDRLFHQLKALEQQHPELVTADSPTQRVG 64 >gi|113460523|ref|YP_718587.1| NAD-dependent DNA ligase LigA [Haemophilus somnus 129PT] gi|122945214|sp|Q0I2H6|DNLJ_HAES1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|112822566|gb|ABI24655.1| DNA ligase (NAD+) [Haemophilus somnus 129PT] Length = 673 Score = 51.2 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%) Query: 54 LSKGEAMI--EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + +G MI ++E L ++ HH+ Y+ LD+P D YDR+ +L AL++Q+PE E+ Sbjct: 1 MKQGIFMIKQQIEELRQLLRHHEYQYHVLDNPQIPDSEYDRLFHQLKALEQQYPEYASEN 60 Query: 112 HPWNTVG 118 P VG Sbjct: 61 SPTQRVG 67 >gi|262369277|ref|ZP_06062605.1| DNA ligase [Acinetobacter johnsonii SH046] gi|262315345|gb|EEY96384.1| DNA ligase [Acinetobacter johnsonii SH046] Length = 679 Score = 51.2 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 32/57 (56%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L++I H YY +D P D YD++ +L AL+EQ+PE D P N VG Sbjct: 10 QMRQLIQILAQHNHAYYVMDQPTIADSEYDQLFHQLKALEEQYPEYIQPDSPINKVG 66 >gi|15603581|ref|NP_246655.1| NAD-dependent DNA ligase LigA [Pasteurella multocida subsp. multocida str. Pm70] gi|81636517|sp|Q9CKA9|DNLJ_PASMU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|12722128|gb|AAK03800.1| Lig [Pasteurella multocida subsp. multocida str. Pm70] Length = 673 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 34/58 (58%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E+E L + +H+ Y+ LD+P D YDR+ RL L++Q+P+ F D P VG Sbjct: 7 LEIEQLRQTLRYHEYQYHVLDNPQIPDAEYDRLFHRLKTLEQQYPQWFSPDSPTQRVG 64 >gi|306844319|ref|ZP_07476911.1| DNA ligase, NAD-dependent [Brucella sp. BO1] gi|306275391|gb|EFM57132.1| DNA ligase, NAD-dependent [Brucella sp. BO1] Length = 719 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 37/68 (54%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ +FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDSPEISDAAYDALKRRNEAIEARFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|170718864|ref|YP_001784038.1| NAD-dependent DNA ligase LigA [Haemophilus somnus 2336] gi|254781341|sp|B0USD9|DNLJ_HAES2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|168826993|gb|ACA32364.1| DNA ligase, NAD-dependent [Haemophilus somnus 2336] Length = 667 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 35/57 (61%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L ++ HH+ Y+ LD+P D YDR+ +L AL++Q+PE E+ P VG Sbjct: 5 QIEELRQLLRHHEYQYHVLDNPQIPDSEYDRLFHQLKALEQQYPEYASENSPTQRVG 61 >gi|306843233|ref|ZP_07475843.1| DNA ligase, NAD-dependent [Brucella sp. BO2] gi|306286556|gb|EFM58135.1| DNA ligase, NAD-dependent [Brucella sp. BO2] Length = 719 Score = 50.8 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDSPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|86749131|ref|YP_485627.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris HaA2] gi|123004307|sp|Q2IYJ4|DNLJ_RHOP2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|86572159|gb|ABD06716.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris HaA2] Length = 714 Score = 50.8 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 37/71 (52%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 A + +L+K +A +E L H YY+ D P +D YD + RL+A++ +FPEL Sbjct: 8 APDIATLTKAKAKVEAMRLRLEIERHNSAYYQHDAPTVSDAEYDALRRRLEAIEAKFPEL 67 Query: 108 FDEDHPWNTVG 118 P TVG Sbjct: 68 VSASSPTQTVG 78 >gi|254719452|ref|ZP_05181263.1| NAD-dependent DNA ligase LigA [Brucella sp. 83/13] gi|265984457|ref|ZP_06097192.1| NAD-dependent DNA ligase LigA [Brucella sp. 83/13] gi|306839229|ref|ZP_07472046.1| DNA ligase, NAD-dependent [Brucella sp. NF 2653] gi|264663049|gb|EEZ33310.1| NAD-dependent DNA ligase LigA [Brucella sp. 83/13] gi|306405776|gb|EFM62038.1| DNA ligase, NAD-dependent [Brucella sp. NF 2653] Length = 719 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDSPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|291569184|dbj|BAI91456.1| DNA ligase [Arthrospira platensis NIES-39] Length = 683 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 21/42 (50%), Positives = 26/42 (61%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LDDP+ DG+YDR+ L L+ Q+PEL D P VG Sbjct: 30 YYVLDDPIMEDGVYDRLYRELQELENQYPELISPDSPTQRVG 71 >gi|27381702|ref|NP_773231.1| DNA ligase [Bradyrhizobium japonicum USDA 110] gi|81735382|sp|Q89FV8|DNLJ_BRAJA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|27354871|dbj|BAC51856.1| DNA ligase [Bradyrhizobium japonicum USDA 110] Length = 716 Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 6/73 (8%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALH---HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 + V L+K +A +E L+++AL H K YY+ D P TD YD + +R +A++++FP Sbjct: 12 RDVAELTKAQAKVE---LMRLALELEGHDKRYYQDDAPTVTDAEYDALRQRFNAIEKRFP 68 Query: 106 ELFDEDHPWNTVG 118 E + P VG Sbjct: 69 EFVSAESPSQKVG 81 >gi|75675255|ref|YP_317676.1| NAD-dependent DNA ligase [Nitrobacter winogradskyi Nb-255] gi|123773282|sp|Q3STR7|DNLJ_NITWN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|74420125|gb|ABA04324.1| NAD-dependent DNA ligase [Nitrobacter winogradskyi Nb-255] Length = 716 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 38/68 (55%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V SL++ +A +E + L H + YY+ D P +D YD + RL+A++ +FP+L Sbjct: 11 VDSLTRSQARVEHKRLALEIETHNERYYQQDAPTVSDATYDALQRRLEAIEARFPDLVTA 70 Query: 111 DHPWNTVG 118 P TVG Sbjct: 71 SSPTQTVG 78 >gi|302390293|ref|YP_003826114.1| DNA ligase, NAD-dependent [Thermosediminibacter oceani DSM 16646] gi|302200921|gb|ADL08491.1| DNA ligase, NAD-dependent [Thermosediminibacter oceani DSM 16646] Length = 672 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 39/65 (60%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + EA ++ L ++ +H + YY D+P+ +D YD++ +L+ L++QFPEL D P Sbjct: 1 MDRSEAEARIKELRELINYHNRQYYVYDNPVISDAEYDKLMRQLEKLEKQFPELITPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|119717662|ref|YP_924627.1| DNA ligase, NAD-dependent [Nocardioides sp. JS614] gi|166216220|sp|A1SMA5|DNLJ_NOCSJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|119538323|gb|ABL82940.1| DNA ligase, NAD-dependent [Nocardioides sp. JS614] Length = 752 Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 62 EVEYLVKIALHHQKW-YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L+ + +W YY LD P D +DR RL+AL+E+FPEL D P TVG Sbjct: 65 EEHRLIAEEIEEARWRYYVLDSPTIDDADFDRRMRRLEALEEEFPELRTPDSPTQTVG 122 >gi|82913524|ref|XP_728678.1| NAD-dependent DNA ligase [Plasmodium yoelii yoelii str. 17XNL] gi|23485151|gb|EAA20243.1| DNA ligase, NAD-dependent, putative [Plasmodium yoelii yoelii] Length = 354 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 23/46 (50%), Positives = 28/46 (60%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YYRLDDPL TD YDR+ L A++ ++PEL D P VG Sbjct: 201 HNVRYYRLDDPLITDAEYDRLMAELLAIEARYPELVTPDSPTQRVG 246 >gi|260892973|ref|YP_003239070.1| DNA ligase, NAD-dependent [Ammonifex degensii KC4] gi|260865114|gb|ACX52220.1| DNA ligase, NAD-dependent [Ammonifex degensii KC4] Length = 672 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 LSK EA +E L + +H YY LD P+ +D YDR+ L AL+E FPE + P Sbjct: 5 LSKEEAKRRIEELRREIAYHDYRYYVLDSPVISDAEYDRLVLELMALEEAFPEFITPNSP 64 Query: 114 WNTVG 118 VG Sbjct: 65 TQRVG 69 >gi|260462100|ref|ZP_05810344.1| DNA ligase, NAD-dependent [Mesorhizobium opportunistum WSM2075] gi|259031960|gb|EEW33227.1| DNA ligase, NAD-dependent [Mesorhizobium opportunistum WSM2075] Length = 734 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 38/70 (54%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K V SLS+ EA E++ L + H + Y+ D P TD YD + R A++E+FP L Sbjct: 4 KPVDSLSESEAEAELQRLAEEIAEHDRRYHTEDAPTITDAEYDALRRRNLAIEERFPGLV 63 Query: 109 DEDHPWNTVG 118 ED P VG Sbjct: 64 REDSPSLRVG 73 >gi|256255361|ref|ZP_05460897.1| NAD-dependent DNA ligase LigA [Brucella ceti B1/94] gi|261222562|ref|ZP_05936843.1| NAD-dependent DNA ligase LigA [Brucella ceti B1/94] gi|260921146|gb|EEX87799.1| NAD-dependent DNA ligase LigA [Brucella ceti B1/94] Length = 719 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|13471538|ref|NP_103104.1| DNA ligase [Mesorhizobium loti MAFF303099] gi|75543387|sp|Q98KC4|DNLJ_RHILO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|14022280|dbj|BAB48890.1| DNA ligase [Mesorhizobium loti MAFF303099] Length = 734 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 38/70 (54%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K V SLS+ EA E++ L + H + Y+ D P TD YD + R A++E+FP L Sbjct: 4 KPVDSLSESEAEAELKRLAEEIAGHDRRYHAEDAPTITDAEYDALRRRNLAIEERFPGLV 63 Query: 109 DEDHPWNTVG 118 ED P VG Sbjct: 64 REDSPSRRVG 73 >gi|294852747|ref|ZP_06793420.1| DNA ligase [Brucella sp. NVSL 07-0026] gi|294821336|gb|EFG38335.1| DNA ligase [Brucella sp. NVSL 07-0026] Length = 719 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|17986872|ref|NP_539506.1| NAD-dependent DNA ligase LigA [Brucella melitensis bv. 1 str. 16M] gi|256045051|ref|ZP_05447952.1| NAD-dependent DNA ligase LigA [Brucella melitensis bv. 1 str. Rev.1] gi|260565350|ref|ZP_05835834.1| DNA ligase [Brucella melitensis bv. 1 str. 16M] gi|265991477|ref|ZP_06104034.1| NAD-dependent DNA ligase LigA [Brucella melitensis bv. 1 str. Rev.1] gi|81852173|sp|Q8YI56|DNLJ_BRUME RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|17982511|gb|AAL51770.1| nad-dependent DNA ligase [Brucella melitensis bv. 1 str. 16M] gi|260151418|gb|EEW86512.1| DNA ligase [Brucella melitensis bv. 1 str. 16M] gi|263002261|gb|EEZ14836.1| NAD-dependent DNA ligase LigA [Brucella melitensis bv. 1 str. Rev.1] Length = 719 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|256061478|ref|ZP_05451622.1| NAD-dependent DNA ligase LigA [Brucella neotomae 5K33] gi|261325484|ref|ZP_05964681.1| NAD-dependent DNA ligase LigA [Brucella neotomae 5K33] gi|261301464|gb|EEY04961.1| NAD-dependent DNA ligase LigA [Brucella neotomae 5K33] Length = 719 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|254702142|ref|ZP_05163970.1| NAD-dependent DNA ligase LigA [Brucella suis bv. 5 str. 513] gi|261752711|ref|ZP_05996420.1| NAD-dependent DNA ligase LigA [Brucella suis bv. 5 str. 513] gi|261742464|gb|EEY30390.1| NAD-dependent DNA ligase LigA [Brucella suis bv. 5 str. 513] Length = 719 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|225852902|ref|YP_002733135.1| NAD-dependent DNA ligase LigA [Brucella melitensis ATCC 23457] gi|256263616|ref|ZP_05466148.1| DNA ligase [Brucella melitensis bv. 2 str. 63/9] gi|254781270|sp|C0RE59|DNLJ_BRUMB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|225641267|gb|ACO01181.1| DNA ligase, NAD-dependent [Brucella melitensis ATCC 23457] gi|263093668|gb|EEZ17673.1| DNA ligase [Brucella melitensis bv. 2 str. 63/9] gi|326409444|gb|ADZ66509.1| NAD-dependent DNA ligase LigA [Brucella melitensis M28] gi|326539150|gb|ADZ87365.1| DNA ligase, NAD-dependent [Brucella melitensis M5-90] Length = 719 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|148560656|ref|YP_001259312.1| NAD-dependent DNA ligase LigA [Brucella ovis ATCC 25840] gi|166215401|sp|A5VRG5|DNLJ_BRUO2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|148371913|gb|ABQ61892.1| DNA ligase, NAD-dependent [Brucella ovis ATCC 25840] Length = 719 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|23502291|ref|NP_698418.1| NAD-dependent DNA ligase LigA [Brucella suis 1330] gi|62290313|ref|YP_222106.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 1 str. 9-941] gi|82700237|ref|YP_414811.1| NAD-dependent DNA ligase LigA [Brucella melitensis biovar Abortus 2308] gi|161619368|ref|YP_001593255.1| NAD-dependent DNA ligase LigA [Brucella canis ATCC 23365] gi|163843675|ref|YP_001628079.1| NAD-dependent DNA ligase LigA [Brucella suis ATCC 23445] gi|189024547|ref|YP_001935315.1| DNA ligase [Brucella abortus S19] gi|225627871|ref|ZP_03785908.1| DNA ligase, NAD-dependent [Brucella ceti str. Cudo] gi|254689615|ref|ZP_05152869.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 6 str. 870] gi|254694105|ref|ZP_05155933.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 3 str. Tulya] gi|254697757|ref|ZP_05159585.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 2 str. 86/8/59] gi|254704678|ref|ZP_05166506.1| NAD-dependent DNA ligase LigA [Brucella suis bv. 3 str. 686] gi|254708093|ref|ZP_05169921.1| NAD-dependent DNA ligase LigA [Brucella pinnipedialis M163/99/10] gi|254710462|ref|ZP_05172273.1| NAD-dependent DNA ligase LigA [Brucella pinnipedialis B2/94] gi|254730646|ref|ZP_05189224.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 4 str. 292] gi|256031956|ref|ZP_05445570.1| NAD-dependent DNA ligase LigA [Brucella pinnipedialis M292/94/1] gi|256113974|ref|ZP_05454757.1| NAD-dependent DNA ligase LigA [Brucella melitensis bv. 3 str. Ether] gi|256160155|ref|ZP_05457849.1| NAD-dependent DNA ligase LigA [Brucella ceti M490/95/1] gi|256257864|ref|ZP_05463400.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 9 str. C68] gi|256369836|ref|YP_003107347.1| DNA ligase [Brucella microti CCM 4915] gi|260169093|ref|ZP_05755904.1| NAD-dependent DNA ligase LigA [Brucella sp. F5/99] gi|260546856|ref|ZP_05822595.1| DNA ligase [Brucella abortus NCTC 8038] gi|260566074|ref|ZP_05836544.1| DNA ligase [Brucella suis bv. 4 str. 40] gi|260755142|ref|ZP_05867490.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 6 str. 870] gi|260758361|ref|ZP_05870709.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 4 str. 292] gi|260762187|ref|ZP_05874530.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 2 str. 86/8/59] gi|260884154|ref|ZP_05895768.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 9 str. C68] gi|261214403|ref|ZP_05928684.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 3 str. Tulya] gi|261315595|ref|ZP_05954792.1| NAD-dependent DNA ligase LigA [Brucella pinnipedialis M163/99/10] gi|261318033|ref|ZP_05957230.1| NAD-dependent DNA ligase LigA [Brucella pinnipedialis B2/94] gi|261755371|ref|ZP_05999080.1| NAD-dependent DNA ligase LigA [Brucella suis bv. 3 str. 686] gi|261758598|ref|ZP_06002307.1| DNA ligase [Brucella sp. F5/99] gi|265989064|ref|ZP_06101621.1| NAD-dependent DNA ligase LigA [Brucella pinnipedialis M292/94/1] gi|265995315|ref|ZP_06107872.1| NAD-dependent DNA ligase LigA [Brucella melitensis bv. 3 str. Ether] gi|265998527|ref|ZP_06111084.1| NAD-dependent DNA ligase LigA [Brucella ceti M490/95/1] gi|297248700|ref|ZP_06932418.1| DNA ligase, NAD-dependent [Brucella abortus bv. 5 str. B3196] gi|75496544|sp|Q57C89|DNLJ_BRUAB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|81752355|sp|Q8FZQ3|DNLJ_BRUSU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|123768412|sp|Q2YLZ6|DNLJ_BRUA2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190359236|sp|A9M679|DNLJ_BRUC2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190359237|sp|B0CHK8|DNLJ_BRUSI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781269|sp|B2S6P4|DNLJ_BRUA1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|23348266|gb|AAN30333.1| DNA ligase, NAD-dependent [Brucella suis 1330] gi|62196445|gb|AAX74745.1| LigA, DNA ligase, NAD-dependent [Brucella abortus bv. 1 str. 9-941] gi|82616338|emb|CAJ11395.1| BRCT domain:NAD-dependent DNA ligase:ATP/GTP-binding site motif A (P-loop):Zn-finger in NAD-dependent DNA ligase, C4 type:NAD [Brucella melitensis biovar Abortus 2308] gi|161336179|gb|ABX62484.1| DNA ligase, NAD-dependent [Brucella canis ATCC 23365] gi|163674398|gb|ABY38509.1| DNA ligase, NAD-dependent [Brucella suis ATCC 23445] gi|189020119|gb|ACD72841.1| DNA ligase [Brucella abortus S19] gi|225617876|gb|EEH14921.1| DNA ligase, NAD-dependent [Brucella ceti str. Cudo] gi|255999999|gb|ACU48398.1| DNA ligase [Brucella microti CCM 4915] gi|260095906|gb|EEW79783.1| DNA ligase [Brucella abortus NCTC 8038] gi|260155592|gb|EEW90672.1| DNA ligase [Brucella suis bv. 4 str. 40] gi|260668679|gb|EEX55619.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 4 str. 292] gi|260672619|gb|EEX59440.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 2 str. 86/8/59] gi|260675250|gb|EEX62071.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 6 str. 870] gi|260873682|gb|EEX80751.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 9 str. C68] gi|260916010|gb|EEX82871.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 3 str. Tulya] gi|261297256|gb|EEY00753.1| NAD-dependent DNA ligase LigA [Brucella pinnipedialis B2/94] gi|261304621|gb|EEY08118.1| NAD-dependent DNA ligase LigA [Brucella pinnipedialis M163/99/10] gi|261738582|gb|EEY26578.1| DNA ligase [Brucella sp. F5/99] gi|261745124|gb|EEY33050.1| NAD-dependent DNA ligase LigA [Brucella suis bv. 3 str. 686] gi|262553151|gb|EEZ08985.1| NAD-dependent DNA ligase LigA [Brucella ceti M490/95/1] gi|262766428|gb|EEZ12217.1| NAD-dependent DNA ligase LigA [Brucella melitensis bv. 3 str. Ether] gi|264661261|gb|EEZ31522.1| NAD-dependent DNA ligase LigA [Brucella pinnipedialis M292/94/1] gi|297175869|gb|EFH35216.1| DNA ligase, NAD-dependent [Brucella abortus bv. 5 str. B3196] Length = 719 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|90424785|ref|YP_533155.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris BisB18] gi|123275077|sp|Q211V0|DNLJ_RHOPB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|90106799|gb|ABD88836.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris BisB18] Length = 795 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 37/66 (56%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +LSK +A +E++ L H YY+ D P +D YD + R++A++ +FPEL D Sbjct: 14 TLSKAKAKVELKRLSLEIERHNNAYYQDDAPKISDAEYDALRHRVEAIEAKFPELVSSDS 73 Query: 113 PWNTVG 118 P VG Sbjct: 74 PTQKVG 79 >gi|254714455|ref|ZP_05176266.1| NAD-dependent DNA ligase LigA [Brucella ceti M644/93/1] gi|254717353|ref|ZP_05179164.1| NAD-dependent DNA ligase LigA [Brucella ceti M13/05/1] gi|261219183|ref|ZP_05933464.1| NAD-dependent DNA ligase LigA [Brucella ceti M13/05/1] gi|261322244|ref|ZP_05961441.1| NAD-dependent DNA ligase LigA [Brucella ceti M644/93/1] gi|260924272|gb|EEX90840.1| NAD-dependent DNA ligase LigA [Brucella ceti M13/05/1] gi|261294934|gb|EEX98430.1| NAD-dependent DNA ligase LigA [Brucella ceti M644/93/1] Length = 719 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|237815820|ref|ZP_04594817.1| DNA ligase, NAD-dependent [Brucella abortus str. 2308 A] gi|237789118|gb|EEP63329.1| DNA ligase, NAD-dependent [Brucella abortus str. 2308 A] Length = 725 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 12 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 71 Query: 111 DHPWNTVG 118 D P VG Sbjct: 72 DSPSRRVG 79 >gi|85859410|ref|YP_461612.1| NAD-dependent DNA ligase [Syntrophus aciditrophicus SB] gi|123738818|sp|Q2LTN8|DNLJ_SYNAS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|85722501|gb|ABC77444.1| NAD-dependent DNA ligase [Syntrophus aciditrophicus SB] Length = 672 Score = 50.1 bits (118), Expect = 9e-05, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 30/47 (63%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H + YY+LDDP +D YD + + L AL++QFP+ ED P +G Sbjct: 20 YHNRRYYQLDDPEISDAEYDSLLQELIALEKQFPQWLTEDSPSRRIG 66 >gi|326570074|gb|EGE20120.1| NAD-dependent DNA ligase [Moraxella catarrhalis BC7] Length = 691 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 38/73 (52%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 + +K S + + + ++ L+K+ H YY +D P +DG YD + L L++Q P Sbjct: 10 NTSKNNPSKANDQIIAQMRALIKLLKRHNHAYYVMDAPTISDGEYDGLRRTLMMLEQQHP 69 Query: 106 ELFDEDHPWNTVG 118 L D P NTVG Sbjct: 70 NLIQPDSPINTVG 82 >gi|294635487|ref|ZP_06713972.1| DNA ligase, NAD-dependent [Edwardsiella tarda ATCC 23685] gi|291091145|gb|EFE23706.1| DNA ligase, NAD-dependent [Edwardsiella tarda ATCC 23685] Length = 675 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 32/57 (56%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L HH+ YY LD+P TD YDR+ +L AL+ +P+L D P VG Sbjct: 8 QLEQLRAALRHHEYQYYVLDEPQVTDAEYDRLMMQLKALESDYPQLVTADSPSQRVG 64 >gi|224369899|ref|YP_002604063.1| LigA1 [Desulfobacterium autotrophicum HRM2] gi|254781310|sp|C0QJ86|DNLJ_DESAH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|223692616|gb|ACN15899.1| LigA1 [Desulfobacterium autotrophicum HRM2] Length = 685 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%) Query: 66 LVKIALH-HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L++ LH H Y+ DDP+ +DG YDR+ +RL A++ QFPEL D P +G Sbjct: 17 LLREQLHVHNINYHVKDDPVISDGEYDRMMQRLIAIETQFPELSTPDSPTRRIG 70 >gi|227822641|ref|YP_002826613.1| NAD-dependent DNA ligase LigA [Sinorhizobium fredii NGR234] gi|254781400|sp|C3MEL9|DNLJ_RHISN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|227341642|gb|ACP25860.1| DNA ligase [Sinorhizobium fredii NGR234] Length = 717 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 38/74 (51%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 L++ K V L++ EA E+ +LV H Y+ D P +D YD + R D ++E F Sbjct: 2 LNEKKPVEQLTETEAAEELAFLVTELARHDALYHGQDAPEISDADYDALKRRNDLIEELF 61 Query: 105 PELFDEDHPWNTVG 118 P L ED P +G Sbjct: 62 PALIREDSPSRKIG 75 >gi|152979719|ref|YP_001345348.1| NAD-dependent DNA ligase LigA [Actinobacillus succinogenes 130Z] gi|190359224|sp|A6VR16|DNLJ_ACTSZ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|150841442|gb|ABR75413.1| DNA ligase, NAD-dependent [Actinobacillus succinogenes 130Z] Length = 672 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 22/47 (46%), Positives = 28/47 (59%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD+P D YDR+ RL AL++Q PEL D P VG Sbjct: 17 HHEYQYHVLDNPEIPDSEYDRLFHRLKALEQQHPELISADSPTQRVG 63 >gi|91977847|ref|YP_570506.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris BisB5] gi|123735250|sp|Q133Y4|DNLJ_RHOPS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|91684303|gb|ABE40605.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris BisB5] Length = 714 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 37/71 (52%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 A + L+K +A +E+ L H K YY+ D P D YD + RL+A++ +FPEL Sbjct: 9 APDIDKLTKPKAKVELMRLRLAIEGHDKAYYQDDAPKIPDADYDALRRRLEAIEAKFPEL 68 Query: 108 FDEDHPWNTVG 118 P TVG Sbjct: 69 LSASSPSQTVG 79 >gi|184157078|ref|YP_001845417.1| NAD-dependent DNA ligase [Acinetobacter baumannii ACICU] gi|254778156|sp|B2HUJ5|DNLJ_ACIBC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|183208672|gb|ACC56070.1| NAD-dependent DNA ligase [Acinetobacter baumannii ACICU] Length = 673 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 60 MIE-VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 MIE + L+++ H YY +D P +D YD + +L AL+EQ+PEL D P VG Sbjct: 1 MIEQMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPELVQADSPTTKVG 60 >gi|291277000|ref|YP_003516772.1| DNA ligase [Helicobacter mustelae 12198] gi|290964194|emb|CBG40040.1| DNA ligase [Helicobacter mustelae 12198] Length = 669 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 K+KK TS+ K + +VE L K+A H YY LDDP+ +D YD + + +E PE Sbjct: 13 KSKKETSMEKEQYEKKVEQLKKMAYH----YYVLDDPISSDEEYDILYHEVKGYEEAHPE 68 Query: 107 LFDEDHPWNTVG 118 ED P VG Sbjct: 69 AIREDSPTQRVG 80 >gi|154252874|ref|YP_001413698.1| DNA ligase, NAD-dependent [Parvibaculum lavamentivorans DS-1] gi|190359267|sp|A7HVV8|DNLJ_PARL1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|154156824|gb|ABS64041.1| DNA ligase, NAD-dependent [Parvibaculum lavamentivorans DS-1] Length = 710 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 38/70 (54%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K V L+ EA E+E L H K YY+ D P +D YD + R +A++ ++PEL Sbjct: 15 KDVDHLTLEEAPEELERLAAEIEKHDKLYYQKDAPRISDAEYDTLRRRNEAIEARYPELV 74 Query: 109 DEDHPWNTVG 118 ED P + VG Sbjct: 75 REDSPSHRVG 84 >gi|239501241|ref|ZP_04660551.1| DNA ligase, NAD-dependent [Acinetobacter baumannii AB900] Length = 678 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 32/57 (56%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L+++ H YY +D P +D YD + +L AL+EQ+PEL D P VG Sbjct: 9 QMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPELVQADSPTTKVG 65 >gi|213156587|ref|YP_002318248.1| DNA ligase, NAD-dependent [Acinetobacter baumannii AB0057] gi|215484469|ref|YP_002326704.1| DNA ligase, NAD-dependent [Acinetobacter baumannii AB307-0294] gi|294838566|ref|ZP_06783249.1| DNA ligase, NAD-dependent [Acinetobacter sp. 6013113] gi|294840420|ref|ZP_06785103.1| DNA ligase, NAD-dependent [Acinetobacter sp. 6014059] gi|294859446|ref|ZP_06797215.1| DNA ligase, NAD-dependent [Acinetobacter sp. 6013150] gi|301347734|ref|ZP_07228475.1| DNA ligase, NAD-dependent [Acinetobacter baumannii AB056] gi|301512482|ref|ZP_07237719.1| DNA ligase, NAD-dependent [Acinetobacter baumannii AB058] gi|301594386|ref|ZP_07239394.1| DNA ligase, NAD-dependent [Acinetobacter baumannii AB059] gi|221222446|sp|A3M2U3|DNLJ_ACIBT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254778154|sp|B7GZ71|DNLJ_ACIB3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254778155|sp|B7I790|DNLJ_ACIB5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781253|sp|B0V8E4|DNLJ_ACIBY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|193076578|gb|ABO11237.2| DNA ligase [Acinetobacter baumannii ATCC 17978] gi|213055747|gb|ACJ40649.1| DNA ligase, NAD-dependent [Acinetobacter baumannii AB0057] gi|213986610|gb|ACJ56909.1| DNA ligase, NAD-dependent [Acinetobacter baumannii AB307-0294] Length = 678 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 32/57 (56%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L+++ H YY +D P +D YD + +L AL+EQ+PEL D P VG Sbjct: 9 QMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPELVQADSPTTKVG 65 >gi|153009084|ref|YP_001370299.1| NAD-dependent DNA ligase LigA [Ochrobactrum anthropi ATCC 49188] gi|166216221|sp|A6WZR6|DNLJ_OCHA4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|151560972|gb|ABS14470.1| DNA ligase, NAD-dependent [Ochrobactrum anthropi ATCC 49188] Length = 721 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 37/68 (54%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA+ E+E L + HH + Y+ D P +D YD + R DA++ +FP L Sbjct: 6 VEKLTEPEAVSELERLAREIAHHDELYHANDRPEISDAEYDALKRRNDAIEARFPHLVRT 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSLRVG 73 >gi|260550982|ref|ZP_05825187.1| DNA ligase [Acinetobacter sp. RUH2624] gi|260405930|gb|EEW99417.1| DNA ligase [Acinetobacter sp. RUH2624] Length = 691 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 32/57 (56%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L+++ H YY +D P +D YD + +L AL+EQ+PEL D P VG Sbjct: 22 QMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPELVQTDSPTTKVG 78 >gi|169797009|ref|YP_001714802.1| DNA ligase [Acinetobacter baumannii AYE] gi|169149936|emb|CAM87830.1| DNA ligase [Acinetobacter baumannii AYE] Length = 691 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 32/57 (56%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L+++ H YY +D P +D YD + +L AL+EQ+PEL D P VG Sbjct: 22 QMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPELVQADSPTTKVG 78 >gi|315634861|ref|ZP_07890143.1| NAD-dependent DNA ligase LigA [Aggregatibacter segnis ATCC 33393] gi|315476413|gb|EFU67163.1| NAD-dependent DNA ligase LigA [Aggregatibacter segnis ATCC 33393] Length = 671 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 33/57 (57%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K +H+ Y+ LDDP D YDR+ +L AL++Q PEL D P VG Sbjct: 8 QIDDLRKTLRYHEYQYHVLDDPQIPDSEYDRLFHQLKALEQQHPELITADSPTQRVG 64 >gi|94263030|ref|ZP_01286849.1| DNA ligase (NAD+) [delta proteobacterium MLMS-1] gi|93456573|gb|EAT06681.1| DNA ligase (NAD+) [delta proteobacterium MLMS-1] Length = 678 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Query: 69 IALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 IA H+ + YY LDDP +DG YDR+ L+ L+ ++PEL D P VG Sbjct: 24 IAYHNHR-YYVLDDPELSDGEYDRLFRELEELESRWPELVTADSPSRRVG 72 >gi|37525354|ref|NP_928698.1| NAD-dependent DNA ligase LigA [Photorhabdus luminescens subsp. laumondii TTO1] gi|81416713|sp|Q7MBH2|DNLJ_PHOLL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|36784781|emb|CAE13691.1| DNA ligase (polydeoxyribonucleotide synthase [NAD+]) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 672 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 31/57 (54%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L HH+ Y+ +D P D YDR+ + L L+EQ+PEL D P +G Sbjct: 7 QIEKLRTTLRHHEYLYHVMDAPEIPDAEYDRLMQELQDLEEQYPELITSDSPTQRIG 63 >gi|326574755|gb|EGE24691.1| NAD-dependent DNA ligase [Moraxella catarrhalis 101P30B1] Length = 691 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 37/73 (50%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D +K S + + + ++ L+K+ H YY +D P +D YD + L L++Q P Sbjct: 10 DTSKNNPSKANDQIIAQMRALIKLLKRHNHAYYVMDAPTISDDEYDGLRRTLMMLEQQHP 69 Query: 106 ELFDEDHPWNTVG 118 L D P NTVG Sbjct: 70 NLIQPDSPINTVG 82 >gi|326572929|gb|EGE22914.1| NAD-dependent DNA ligase [Moraxella catarrhalis CO72] Length = 691 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 37/73 (50%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D +K S + + + ++ L+K+ H YY +D P +D YD + L L++Q P Sbjct: 10 DTSKNNPSKANDQIIAQMRALIKLLKRHNHAYYVMDAPTISDDEYDGLRRTLMMLEQQHP 69 Query: 106 ELFDEDHPWNTVG 118 L D P NTVG Sbjct: 70 NLIQPDSPINTVG 82 >gi|326569993|gb|EGE20040.1| NAD-dependent DNA ligase [Moraxella catarrhalis BC1] Length = 691 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 37/73 (50%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D +K S + + + ++ L+K+ H YY +D P +D YD + L L++Q P Sbjct: 10 DTSKNNPSKANDQIIAQMRALIKLLKRHNHAYYVMDAPTISDDEYDGLRRTLMMLEQQHP 69 Query: 106 ELFDEDHPWNTVG 118 L D P NTVG Sbjct: 70 NLIQPDSPINTVG 82 >gi|326564268|gb|EGE14498.1| NAD-dependent DNA ligase [Moraxella catarrhalis 103P14B1] Length = 691 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 37/73 (50%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D +K S + + + ++ L+K+ H YY +D P +D YD + L L++Q P Sbjct: 10 DTSKNNPSKANDQIIAQMRALIKLLKRHNHAYYVMDAPTISDDEYDGLRRTLMMLEQQHP 69 Query: 106 ELFDEDHPWNTVG 118 L D P NTVG Sbjct: 70 NLIQPDSPINTVG 82 >gi|296113927|ref|YP_003627865.1| NAD-dependent DNA ligase [Moraxella catarrhalis RH4] gi|295921621|gb|ADG61972.1| NAD-dependent DNA ligase [Moraxella catarrhalis RH4] Length = 691 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 37/73 (50%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D +K S + + + ++ L+K+ H YY +D P +D YD + L L++Q P Sbjct: 10 DTSKNNPSKANDQIIAQMRALIKLLKRHNHAYYVMDAPTISDDEYDGLRRTLMMLEQQHP 69 Query: 106 ELFDEDHPWNTVG 118 L D P NTVG Sbjct: 70 NLIQPDSPINTVG 82 >gi|297566494|ref|YP_003685466.1| DNA ligase, NAD-dependent [Meiothermus silvanus DSM 9946] gi|296850943|gb|ADH63958.1| DNA ligase, NAD-dependent [Meiothermus silvanus DSM 9946] Length = 670 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 33/61 (54%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EA + L + +H YY LDDP+ +D YDR+ L L+ ++PEL D P TV Sbjct: 10 EAQRRIHQLREEIRYHNYRYYVLDDPVISDAEYDRLLRELKELEARYPELVTPDSPTQTV 69 Query: 118 G 118 G Sbjct: 70 G 70 >gi|261884935|ref|ZP_06008974.1| NAD-dependent DNA ligase LigA [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 195 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 36/69 (52%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L Sbjct: 5 SVEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVR 64 Query: 110 EDHPWNTVG 118 +D P VG Sbjct: 65 DDSPSRRVG 73 >gi|254480787|ref|ZP_05094034.1| DNA ligase, NAD-dependent [marine gamma proteobacterium HTCC2148] gi|214039370|gb|EEB80030.1| DNA ligase, NAD-dependent [marine gamma proteobacterium HTCC2148] Length = 677 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 22/42 (52%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LDDP D YDR +L +EQFPEL ED P VG Sbjct: 24 YYVLDDPSVPDAEYDRYLRQLQGFEEQFPELVTEDSPTQRVG 65 >gi|262373317|ref|ZP_06066596.1| DNA ligase, NAD-dependent [Acinetobacter junii SH205] gi|262313342|gb|EEY94427.1| DNA ligase, NAD-dependent [Acinetobacter junii SH205] Length = 677 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 32/57 (56%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L+++ H YY +D P TD YD + +L AL++Q+PE D P N VG Sbjct: 9 QMRQLIQLIAKHNHAYYVMDQPTITDSEYDHLFHQLKALEQQYPEFMQADTPTNKVG 65 >gi|149184723|ref|ZP_01863041.1| DNA ligase [Erythrobacter sp. SD-21] gi|148832043|gb|EDL50476.1| DNA ligase [Erythrobacter sp. SD-21] Length = 690 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 36/72 (50%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 A K +++ EA E+ L + H K Y+ D P TD +D + R L+EQFP L Sbjct: 3 ASKPVDMTEAEAANELMRLARAIAKHNKLYHAEDAPEITDQEFDALVRRNAELEEQFPHL 62 Query: 108 FDEDHPWNTVGY 119 ED P VG+ Sbjct: 63 VREDSPSKVVGH 74 >gi|126640855|ref|YP_001083839.1| DNA ligase [Acinetobacter baumannii ATCC 17978] gi|322506977|gb|ADX02431.1| DNA ligase [Acinetobacter baumannii 1656-2] gi|323516844|gb|ADX91225.1| DNA ligase, NAD-dependent [Acinetobacter baumannii TCDC-AB0715] Length = 669 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 30/53 (56%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L+++ H YY +D P +D YD + +L AL+EQ+PEL D P VG Sbjct: 4 LIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPELVQADSPTTKVG 56 >gi|183981708|ref|YP_001849999.1| NAD-dependent DNA ligase LigA [Mycobacterium marinum M] gi|254781377|sp|B2HIF0|DNLJ_MYCMM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|183175034|gb|ACC40144.1| DNA ligase [NAD dependent] LigA [Mycobacterium marinum M] Length = 687 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 34/61 (55%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + + + L + HQ YY D P+ TD +D + RL+AL+EQ+PEL D P V Sbjct: 4 EVLRQWQELAEQVREHQFRYYVRDAPVITDAEFDELLRRLEALEEQYPELRTPDSPTQLV 63 Query: 118 G 118 G Sbjct: 64 G 64 >gi|169831769|ref|YP_001717751.1| DNA ligase, NAD-dependent [Candidatus Desulforudis audaxviator MP104C] gi|254781311|sp|B1I551|DNLJ_DESAP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|169638613|gb|ACA60119.1| DNA ligase, NAD-dependent [Candidatus Desulforudis audaxviator MP104C] Length = 672 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EA E L + +H YY LDDP+ D YDR+ L AL+ +PEL D P V Sbjct: 5 EARARAEELRREIEYHDHRYYVLDDPVIEDAEYDRLVRELVALETAYPELVTPDSPTQRV 64 Query: 118 G 118 G Sbjct: 65 G 65 >gi|319899147|ref|YP_004159240.1| DNA ligase [Bartonella clarridgeiae 73] gi|319403111|emb|CBI76669.1| DNA ligase [Bartonella clarridgeiae 73] Length = 718 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D K +T+L EA E+E+L K H YYR D P +D YD + R A++ FP Sbjct: 4 DVIKNLTAL---EAASELEWLAKEIARHDVLYYRDDQPEISDAEYDALRRRNGAIENLFP 60 Query: 106 ELFDEDHPWNTVG 118 EL D P +G Sbjct: 61 ELIRADSPTFKIG 73 >gi|222099565|ref|YP_002534133.1| DNA ligase [Thermotoga neapolitana DSM 4359] gi|254781438|sp|B9K734|DNLJ_THENN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|221571955|gb|ACM22767.1| DNA ligase [Thermotoga neapolitana DSM 4359] Length = 693 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 26/61 (42%), Positives = 34/61 (55%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + EVE L + +H YY L+DP+ TD YDR+ RL L+ +PEL D P V Sbjct: 14 EVIEEVERLREEIEYHNYRYYVLNDPVITDEEYDRLMRRLIELERMYPELVTPDSPTQRV 73 Query: 118 G 118 G Sbjct: 74 G 74 >gi|15642875|ref|NP_227916.1| DNA ligase [Thermotoga maritima MSB8] gi|7674016|sp|Q9WXV5|DNLJ_THEMA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|4980590|gb|AAD35194.1|AE001696_8 DNA ligase [Thermotoga maritima MSB8] Length = 688 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 26/61 (42%), Positives = 34/61 (55%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + EVE L + +H YY L+DP+ TD YDR+ RL L+ +PEL D P V Sbjct: 9 EVIEEVERLREEIEYHNYRYYVLNDPVITDEEYDRLMRRLIELERMYPELVTPDSPTQRV 68 Query: 118 G 118 G Sbjct: 69 G 69 >gi|326562480|gb|EGE12798.1| NAD-dependent DNA ligase [Moraxella catarrhalis 46P47B1] gi|326567201|gb|EGE17321.1| NAD-dependent DNA ligase [Moraxella catarrhalis 12P80B1] gi|326568292|gb|EGE18374.1| NAD-dependent DNA ligase [Moraxella catarrhalis BC8] Length = 691 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 38/73 (52%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 + +K S + + + ++ L+K+ H YY +D P +DG YD + L L++Q P Sbjct: 10 NTSKNNPSKANDQIIAQMCALIKLLKRHNHAYYVMDAPTISDGEYDGLRRTLMMLEQQHP 69 Query: 106 ELFDEDHPWNTVG 118 L D P NTVG Sbjct: 70 NLIQPDSPINTVG 82 >gi|253988889|ref|YP_003040245.1| NAD-dependent DNA ligase LigA [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780339|emb|CAQ83500.1| DNA ligase [Photorhabdus asymbiotica] Length = 672 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 31/57 (54%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L K HH+ Y+ +D P +D YDR+ + L L+ Q PEL D P VG Sbjct: 7 QIENLRKTLRHHEYLYHVMDAPEISDAEYDRLMQELKTLEGQHPELITSDSPTQRVG 63 >gi|296132371|ref|YP_003639618.1| DNA ligase, NAD-dependent [Thermincola sp. JR] gi|296030949|gb|ADG81717.1| DNA ligase, NAD-dependent [Thermincola potens JR] Length = 665 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A + L K H +YY LD P TD YDR+ L L++Q+P+L D P Sbjct: 1 MDKAAAAKRINELRKQIEEHNYYYYVLDRPRITDAEYDRLMRELTELEQQYPDLVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|260555699|ref|ZP_05827919.1| DNA ligase, NAD-dependent [Acinetobacter baumannii ATCC 19606] gi|260410610|gb|EEX03908.1| DNA ligase, NAD-dependent [Acinetobacter baumannii ATCC 19606] Length = 691 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 32/57 (56%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L+++ H YY +D P +D YD + +L AL+EQ+PEL D P VG Sbjct: 22 QMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPELVQADSPTMKVG 78 >gi|116626792|ref|YP_828948.1| DNA ligase, NAD-dependent [Candidatus Solibacter usitatus Ellin6076] gi|122251346|sp|Q01NV7|DNLJ_SOLUE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116229954|gb|ABJ88663.1| DNA ligase, NAD-dependent [Candidatus Solibacter usitatus Ellin6076] Length = 662 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 31/58 (53%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E+E L + HH+ YY LD P TD YD + RL L+ + P+L D P VG Sbjct: 6 VEIEKLREQLHHHEHLYYVLDKPEITDAEYDALMHRLQELETKHPDLLTPDSPTQRVG 63 >gi|154245706|ref|YP_001416664.1| DNA ligase, NAD-dependent [Xanthobacter autotrophicus Py2] gi|254782313|sp|A7IG64|DNLJ_XANP2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|154159791|gb|ABS67007.1| DNA ligase, NAD-dependent [Xanthobacter autotrophicus Py2] Length = 720 Score = 48.1 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 27/72 (37%), Positives = 37/72 (51%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 +A V LS EA E + L + H YYR D P+ +D YD + R +A++E+FP Sbjct: 17 RAIPVDDLSPAEAASEHKALAQEITGHDAAYYREDAPVVSDAEYDALRHRYEAIEERFPG 76 Query: 107 LFDEDHPWNTVG 118 L ED VG Sbjct: 77 LRGEDSLSEKVG 88 >gi|169630426|ref|YP_001704075.1| NAD-dependent DNA ligase LigA [Mycobacterium abscessus ATCC 19977] gi|254781373|sp|B1MDV2|DNLJ_MYCA9 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|169242393|emb|CAM63421.1| DNA ligase (polydeoxyribonucleotide synthase NAD+) [Mycobacterium abscessus] Length = 681 Score = 48.1 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 22/46 (47%), Positives = 28/46 (60%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ +DG +D + RL AL+EQ+PEL D P VG Sbjct: 19 HQFRYYVKDAPVISDGQFDELLRRLTALEEQYPELRTPDSPTQLVG 64 >gi|293609092|ref|ZP_06691395.1| DNA ligase [Acinetobacter sp. SH024] gi|292829665|gb|EFF88027.1| DNA ligase [Acinetobacter sp. SH024] Length = 679 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 32/57 (56%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L+++ H YY +D P +D YD + +L AL+EQ+P+L D P VG Sbjct: 9 QMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPDLVQSDSPTTKVG 65 >gi|238752012|ref|ZP_04613496.1| DNA ligase [Yersinia rohdei ATCC 43380] gi|238709712|gb|EEQ01946.1| DNA ligase [Yersinia rohdei ATCC 43380] Length = 670 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Query: 58 EAMIEVEYLVKIAL-HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E++I+ +K +L HH+ YY LD P D YDR+ ++L L+ Q PEL D P Sbjct: 2 ESIIQQINQLKTSLRHHEHQYYVLDAPEIPDAEYDRMMQQLRELEAQHPELITNDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|325121133|gb|ADY80656.1| DNA ligase [Acinetobacter calcoaceticus PHEA-2] Length = 679 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 32/57 (56%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L+++ H YY +D P +D YD + +L AL+EQ+P+L D P VG Sbjct: 9 QMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPDLVQSDSPTTKVG 65 >gi|50084060|ref|YP_045570.1| DNA ligase [Acinetobacter sp. ADP1] gi|81393600|sp|Q6FDW0|DNLJ_ACIAD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|49530036|emb|CAG67748.1| DNA ligase [Acinetobacter sp. ADP1] Length = 676 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 36/65 (55%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + + ++ L+++ H YY +D P TD YD++ +L AL+ ++PEL D P Sbjct: 2 MQPADIVAQMRQLIQLIAKHNHAYYVMDQPSITDNEYDQLFHQLKALEAEYPELTQADTP 61 Query: 114 WNTVG 118 N VG Sbjct: 62 TNRVG 66 >gi|118617527|ref|YP_905859.1| NAD-dependent DNA ligase LigA [Mycobacterium ulcerans Agy99] gi|166216215|sp|A0PPW9|DNLJ_MYCUA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|118569637|gb|ABL04388.1| DNA ligase [NAD dependent] LigA [Mycobacterium ulcerans Agy99] Length = 683 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 22/46 (47%), Positives = 28/46 (60%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ TD +D + RL+AL+EQ+PEL D P VG Sbjct: 15 HQFRYYVRDAPVITDAEFDELLRRLEALEEQYPELRTPDSPTQLVG 60 >gi|83592275|ref|YP_426027.1| DNA ligase (NAD+) [Rhodospirillum rubrum ATCC 11170] gi|123753272|sp|Q2RVV5|DNLJ_RHORT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|83575189|gb|ABC21740.1| DNA ligase (NAD+) [Rhodospirillum rubrum ATCC 11170] Length = 698 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 35/68 (51%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L H + Y++ D P TDG YD + R + ++ FPEL Sbjct: 4 VADLTEAEAARELERLAAEIARHDRLYHQQDAPEITDGEYDALVRRNNEIEAAFPELVRG 63 Query: 111 DHPWNTVG 118 D P VG Sbjct: 64 DSPSAHVG 71 >gi|254781232|sp|B0VU02|DNLJ_ACIBS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 678 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 31/57 (54%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L+++ H YY +D P +D YD + +L AL+EQ+PE D P VG Sbjct: 9 QMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPEFVQADSPTTKVG 65 >gi|169634132|ref|YP_001707868.1| DNA ligase [Acinetobacter baumannii SDF] gi|169152924|emb|CAP01965.1| DNA ligase [Acinetobacter baumannii] Length = 691 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 31/57 (54%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L+++ H YY +D P +D YD + +L AL+EQ+PE D P VG Sbjct: 22 QMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPEFVQADSPTTKVG 78 >gi|327399096|ref|YP_004339965.1| DNA ligase [Hippea maritima DSM 10411] gi|327181725|gb|AEA33906.1| DNA ligase [Hippea maritima DSM 10411] Length = 667 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 35/61 (57%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EA +E L K +H YY LDDP+ +D YD + + L L+E +P+ +DE+ P V Sbjct: 5 EAKERIEQLRKKLHYHNYRYYVLDDPIISDSEYDMMLKELKELEESYPQFYDENSPTVRV 64 Query: 118 G 118 G Sbjct: 65 G 65 >gi|197105771|ref|YP_002131148.1| DNA ligase, NAD-dependent [Phenylobacterium zucineum HLK1] gi|254781386|sp|B4RFE9|DNLJ_PHEZH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|196479191|gb|ACG78719.1| DNA ligase, NAD-dependent [Phenylobacterium zucineum HLK1] Length = 692 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 34/70 (48%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K V SL++ EA E+ L H YYR D P +D YD + R D L+ FP L Sbjct: 2 KSVESLTEAEAAEELTRLADEIAAHDIRYYREDAPTISDAAYDALRRRNDELEAAFPHLI 61 Query: 109 DEDHPWNTVG 118 E+ P +G Sbjct: 62 RENSPSLRIG 71 >gi|166216283|sp|Q07PR9|DNLJ_RHOP5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 715 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L+K +A +E+ L H K YY+ D P +D YD + RL+ ++ +FPEL Sbjct: 11 VATLTKAKAKVELMRLALEIERHDKAYYQEDAPKVSDADYDALRRRLEEIEHKFPELVSG 70 Query: 111 DHPWNTVG 118 P VG Sbjct: 71 ASPSQKVG 78 >gi|317491275|ref|ZP_07949711.1| DNA ligase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920822|gb|EFV42145.1| DNA ligase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 678 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 22/47 (46%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ L AL+EQ PEL D P VG Sbjct: 22 HHEYQYHVLDAPEIPDAEYDRLMRELRALEEQHPELITPDSPTQRVG 68 >gi|148257407|ref|YP_001241992.1| DNA ligase (polydeoxyribonucleotide synthase (NAD+)) [Bradyrhizobium sp. BTAi1] gi|166215399|sp|A5EPJ2|DNLJ_BRASB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|146409580|gb|ABQ38086.1| DNA ligase (Polydeoxyribonucleotide synthase (NAD+)) [Bradyrhizobium sp. BTAi1] Length = 716 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 37/72 (51%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 K V L+K +A +E + L H + YY+ D P +D YD + R +A++ +FPE Sbjct: 9 KPVDVAELTKAQAKVEWKRLALELEVHDRLYYQDDAPKISDAEYDELRRRFNAIETRFPE 68 Query: 107 LFDEDHPWNTVG 118 L + P VG Sbjct: 69 LVSSESPSQKVG 80 >gi|115524134|ref|YP_781045.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris BisA53] gi|115518081|gb|ABJ06065.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris BisA53] Length = 730 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L+K +A +E+ L H K YY+ D P +D YD + RL+ ++ +FPEL Sbjct: 26 VATLTKAKAKVELMRLALEIERHDKAYYQEDAPKVSDADYDALRRRLEEIEHKFPELVSG 85 Query: 111 DHPWNTVG 118 P VG Sbjct: 86 ASPSQKVG 93 >gi|52425821|ref|YP_088958.1| NAD-dependent DNA ligase LigA [Mannheimia succiniciproducens MBEL55E] gi|81386743|sp|Q65RN7|DNLJ_MANSM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|52307873|gb|AAU38373.1| Lig protein [Mannheimia succiniciproducens MBEL55E] Length = 675 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 32/57 (56%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L +H+ Y+ LDDP D YDR+ +L AL++Q PEL D P VG Sbjct: 9 QIKQLRDTLRYHEYQYHVLDDPKIPDAEYDRLFHQLKALEQQHPELITADSPTQRVG 65 >gi|284053772|ref|ZP_06383982.1| NAD-dependent DNA ligase LigA [Arthrospira platensis str. Paraca] Length = 683 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 20/42 (47%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P+ DG+YDR+ L L+ Q+PEL D P VG Sbjct: 30 YYVLDAPIMEDGVYDRLYRELQELENQYPELISPDSPTQRVG 71 >gi|323702801|ref|ZP_08114460.1| DNA ligase, NAD-dependent [Desulfotomaculum nigrificans DSM 574] gi|323532189|gb|EGB22069.1| DNA ligase, NAD-dependent [Desulfotomaculum nigrificans DSM 574] Length = 669 Score = 47.8 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 32/61 (52%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E VE L + +H YY LD+P TDG YD++ + L L+ +PEL D P V Sbjct: 7 EIKARVEELRREINYHNHQYYVLDNPTITDGQYDQLVQELLRLENAYPELVSPDSPTQRV 66 Query: 118 G 118 G Sbjct: 67 G 67 >gi|134300185|ref|YP_001113681.1| NAD-dependent DNA ligase [Desulfotomaculum reducens MI-1] gi|190359251|sp|A4J703|DNLJ_DESRM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|134052885|gb|ABO50856.1| DNA ligase, NAD-dependent [Desulfotomaculum reducens MI-1] Length = 670 Score = 47.8 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 32/61 (52%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 ++ VE L + HH YY LD P TD YD++ + L L+E+ PEL D P V Sbjct: 7 QSKARVEALRREINHHNYQYYVLDQPTITDAQYDQLMQELLRLEERHPELVTPDSPTQRV 66 Query: 118 G 118 G Sbjct: 67 G 67 >gi|294649516|ref|ZP_06726937.1| NAD-dependent DNA ligase LigA [Acinetobacter haemolyticus ATCC 19194] gi|292824577|gb|EFF83359.1| NAD-dependent DNA ligase LigA [Acinetobacter haemolyticus ATCC 19194] Length = 675 Score = 47.8 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 32/57 (56%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L+++ H YY +D P +D YD + +L AL++Q+PE D P N VG Sbjct: 9 QMRQLIQLIAKHNHAYYVMDQPSISDSEYDHLFHQLKALEQQYPECIQADTPTNKVG 65 >gi|226953496|ref|ZP_03823960.1| DNA ligase [Acinetobacter sp. ATCC 27244] gi|226835781|gb|EEH68164.1| DNA ligase [Acinetobacter sp. ATCC 27244] Length = 675 Score = 47.8 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 32/57 (56%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L+++ H YY +D P +D YD + +L AL++Q+PE D P N VG Sbjct: 9 QMRQLIQLIAKHNHAYYVMDQPSISDSEYDHLFHQLKALEQQYPECIQADTPTNKVG 65 >gi|163760776|ref|ZP_02167856.1| DNA ligase, NAD-dependent [Hoeflea phototrophica DFL-43] gi|162282098|gb|EDQ32389.1| DNA ligase, NAD-dependent [Hoeflea phototrophica DFL-43] Length = 739 Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 37/70 (52%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K + +LS+ EA E++ L H + Y+R D P+ +D YD R A++E+FP L Sbjct: 42 KPIEALSEAEAKAELDRLAAEIARHDEAYHRKDAPIVSDAEYDAFKRRNLAIEERFPHLR 101 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 102 LADSPSLKVG 111 >gi|39936579|ref|NP_948855.1| DNA ligase [Rhodopseudomonas palustris CGA009] gi|39650435|emb|CAE28958.1| DNA ligase [Rhodopseudomonas palustris CGA009] Length = 692 Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 29/46 (63%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H K YY+ D P +D YD + RL+A++++FPEL + P TVG Sbjct: 10 HDKAYYQDDAPKISDADYDALRRRLEAIEQKFPELVNASSPTQTVG 55 >gi|296126514|ref|YP_003633766.1| DNA ligase, NAD-dependent [Brachyspira murdochii DSM 12563] gi|296018330|gb|ADG71567.1| DNA ligase, NAD-dependent [Brachyspira murdochii DSM 12563] Length = 663 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 38/65 (58%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++K EA +++ L + +H K YY D+P D YD++ L+ L+ +FPEL +D P Sbjct: 1 MNKEEAKQKIKQLTETINYHNKLYYTDDNPEIEDYEYDKLFRELENLEREFPELKKDDSP 60 Query: 114 WNTVG 118 N VG Sbjct: 61 TNKVG 65 >gi|254785950|ref|YP_003073379.1| DNA ligase, NAD-dependent [Teredinibacter turnerae T7901] gi|237685872|gb|ACR13136.1| DNA ligase, NAD-dependent [Teredinibacter turnerae T7901] Length = 676 Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH + YY LD+P D YDR+ L L+ +FP+L D P VG Sbjct: 24 HHNRQYYLLDEPEIPDAEYDRLFHELKTLEAEFPQLETADSPTQRVG 70 >gi|262375659|ref|ZP_06068891.1| DNA ligase, NAD-dependent [Acinetobacter lwoffii SH145] gi|262309262|gb|EEY90393.1| DNA ligase, NAD-dependent [Acinetobacter lwoffii SH145] Length = 679 Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 33/57 (57%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L+++ H YY +D P D YD++ +L AL++Q+P+L D P + VG Sbjct: 10 QMRQLIQLLAKHNHAYYVMDQPSIEDSEYDQLFHQLKALEQQYPDLIQSDSPTDKVG 66 >gi|227543584|ref|ZP_03973633.1| DNA ligase, NAD-dependent [Lactobacillus reuteri CF48-3A] gi|300909387|ref|ZP_07126848.1| NAD-dependent DNA ligase LigA [Lactobacillus reuteri SD2112] gi|227186424|gb|EEI66495.1| DNA ligase, NAD-dependent [Lactobacillus reuteri CF48-3A] gi|300893252|gb|EFK86611.1| NAD-dependent DNA ligase LigA [Lactobacillus reuteri SD2112] Length = 680 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 36/72 (50%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 K V L+ EA E++ L K YY D+P D +YDR +RL L+EQFP+ Sbjct: 4 KQTPVKELTLQEAQDEIKPLRAKLTEWGKEYYEQDNPTVEDHVYDRAYQRLVQLEEQFPQ 63 Query: 107 LFDEDHPWNTVG 118 L D P VG Sbjct: 64 LLSADSPTQRVG 75 >gi|114570616|ref|YP_757296.1| DNA ligase [Maricaulis maris MCS10] gi|122315591|sp|Q0AMX9|DNLJ_MARMM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|114341078|gb|ABI66358.1| DNA ligase, NAD-dependent [Maricaulis maris MCS10] Length = 701 Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 36/70 (51%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K V L++ EA E L + H K YY+ D P +D YD + +L+A++ +FP+ Sbjct: 5 KDVDQLTEAEARAEHARLAREIAGHDKAYYQSDAPKISDAAYDALRRKLEAIEVRFPQFI 64 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 65 DLLSPTQRVG 74 >gi|148544657|ref|YP_001272027.1| DNA ligase, NAD-dependent [Lactobacillus reuteri DSM 20016] gi|184154010|ref|YP_001842351.1| NAD-dependent DNA ligase [Lactobacillus reuteri JCM 1112] gi|227363780|ref|ZP_03847887.1| DNA ligase, NAD-dependent [Lactobacillus reuteri MM2-3] gi|325682991|ref|ZP_08162507.1| NAD-dependent DNA ligase LigA [Lactobacillus reuteri MM4-1A] gi|209572830|sp|A5VLG6|DNLJ_LACRD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781354|sp|B2G8T9|DNLJ_LACRJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|148531691|gb|ABQ83690.1| DNA ligase, NAD-dependent [Lactobacillus reuteri DSM 20016] gi|183225354|dbj|BAG25871.1| NAD-dependent DNA ligase [Lactobacillus reuteri JCM 1112] gi|227071137|gb|EEI09453.1| DNA ligase, NAD-dependent [Lactobacillus reuteri MM2-3] gi|324977341|gb|EGC14292.1| NAD-dependent DNA ligase LigA [Lactobacillus reuteri MM4-1A] Length = 680 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 37/73 (50%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 +K V L+ EA E++ L K YY D+P D +YDR +RL L+EQFP Sbjct: 3 EKQTPVKELTLQEAQDEIKPLRAKLTKWGKEYYEQDNPTVEDHVYDRAYQRLVQLEEQFP 62 Query: 106 ELFDEDHPWNTVG 118 +L D P VG Sbjct: 63 QLVSADSPTQRVG 75 >gi|326559356|gb|EGE09783.1| NAD-dependent DNA ligase [Moraxella catarrhalis 7169] Length = 691 Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 37/73 (50%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 + +K S + + + ++ L+K+ H YY +D P +D YD + L L++Q P Sbjct: 10 NTSKNNPSKANDQIIAQMRALIKLLKRHNHAYYVMDAPTISDDEYDGLRRTLMMLEQQHP 69 Query: 106 ELFDEDHPWNTVG 118 L D P NTVG Sbjct: 70 NLIQPDSPINTVG 82 >gi|281412160|ref|YP_003346239.1| DNA ligase, NAD-dependent [Thermotoga naphthophila RKU-10] gi|281373263|gb|ADA66825.1| DNA ligase, NAD-dependent [Thermotoga naphthophila RKU-10] Length = 688 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 34/61 (55%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + EVE L + +H YY L+DP+ TD YD++ RL L+ +PEL D P V Sbjct: 9 EVIEEVERLREEIEYHNYRYYVLNDPVITDEEYDKLMRRLIELERMYPELVTPDSPTQRV 68 Query: 118 G 118 G Sbjct: 69 G 69 >gi|148269959|ref|YP_001244419.1| DNA ligase, NAD-dependent [Thermotoga petrophila RKU-1] gi|170288644|ref|YP_001738882.1| DNA ligase, NAD-dependent [Thermotoga sp. RQ2] gi|190359298|sp|A5IKX0|DNLJ_THEP1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781442|sp|B1LA51|DNLJ_THESQ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|147735503|gb|ABQ46843.1| DNA ligase, NAD-dependent [Thermotoga petrophila RKU-1] gi|170176147|gb|ACB09199.1| DNA ligase, NAD-dependent [Thermotoga sp. RQ2] Length = 688 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 34/61 (55%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + EVE L + +H YY L+DP+ TD YD++ RL L+ +PEL D P V Sbjct: 9 EVIEEVERLREEIEYHNYRYYVLNDPVITDEEYDKLMRRLIELERMYPELVTPDSPTQRV 68 Query: 118 G 118 G Sbjct: 69 G 69 >gi|291296053|ref|YP_003507451.1| DNA ligase NAD-dependent [Meiothermus ruber DSM 1279] gi|290471012|gb|ADD28431.1| DNA ligase, NAD-dependent [Meiothermus ruber DSM 1279] Length = 666 Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 3/61 (4%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++E+ L++ +H YY LD P +D YDR+ + L AL+E PEL D P TV Sbjct: 6 QRIMELRELIR---YHNYRYYVLDKPEISDAEYDRLLQELRALEEAHPELIIPDSPTQTV 62 Query: 118 G 118 G Sbjct: 63 G 63 >gi|194466912|ref|ZP_03072899.1| DNA ligase, NAD-dependent [Lactobacillus reuteri 100-23] gi|194453948|gb|EDX42845.1| DNA ligase, NAD-dependent [Lactobacillus reuteri 100-23] Length = 680 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 37/73 (50%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 +K V L+ EA E++ L K YY D+P D +YDR +RL L+EQFP Sbjct: 3 EKQTPVKELTLQEAQDEIKPLRAKLTKWGKEYYEQDNPTVEDHVYDRAYQRLVQLEEQFP 62 Query: 106 ELFDEDHPWNTVG 118 +L D P VG Sbjct: 63 QLVSADSPTQRVG 75 >gi|225620892|ref|YP_002722150.1| NAD-dependent DNA ligase LigA [Brachyspira hyodysenteriae WA1] gi|254781267|sp|C0QVE5|DNLJ_BRAHW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|225215712|gb|ACN84446.1| NAD-dependent DNA ligase LigA [Brachyspira hyodysenteriae WA1] Length = 663 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 34/61 (55%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EA +E L + +H K YY D+P D YD++ L+ L+ +FPEL +D P N V Sbjct: 5 EAKQRIEQLTETINYHNKLYYTDDNPEIEDYEYDKLFRELENLEREFPELKKDDSPTNKV 64 Query: 118 G 118 G Sbjct: 65 G 65 >gi|300870442|ref|YP_003785313.1| NAD-dependent DNA ligase [Brachyspira pilosicoli 95/1000] gi|300688141|gb|ADK30812.1| NAD-dependent DNA ligase [Brachyspira pilosicoli 95/1000] Length = 663 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 34/61 (55%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EA ++E L +H K YY D+P D YD++ L+ L+ +FPEL +D P N V Sbjct: 5 EARKKIEQLTATINYHNKLYYTDDNPEIEDYEYDKLFRELENLEREFPELKKDDSPTNKV 64 Query: 118 G 118 G Sbjct: 65 G 65 >gi|262280095|ref|ZP_06057880.1| DNA ligase [Acinetobacter calcoaceticus RUH2202] gi|262260446|gb|EEY79179.1| DNA ligase [Acinetobacter calcoaceticus RUH2202] Length = 692 Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 31/57 (54%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L+++ H YY +D P +D YD + +L AL+EQ+PE D P VG Sbjct: 22 QMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPEQVQSDSPTTKVG 78 >gi|257454409|ref|ZP_05619671.1| DNA ligase, NAD-dependent [Enhydrobacter aerosaccus SK60] gi|257448175|gb|EEV23156.1| DNA ligase, NAD-dependent [Enhydrobacter aerosaccus SK60] Length = 675 Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 27/47 (57%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+PL D YD++ + L AL+ +P+L D P N VG Sbjct: 21 QHNHAYYVLDNPLLEDSEYDQLRQELVALETAYPQLVQSDSPTNQVG 67 >gi|262379150|ref|ZP_06072306.1| DNA ligase, NAD-dependent [Acinetobacter radioresistens SH164] gi|262298607|gb|EEY86520.1| DNA ligase, NAD-dependent [Acinetobacter radioresistens SH164] Length = 682 Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 32/57 (56%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L+++ H YY +D P +D YD + +L AL+EQ+P+L D P VG Sbjct: 14 QMRQLIQLIAQHNHAYYVMDQPSISDNEYDSLFHQLKALEEQYPDLVQNDTPTRRVG 70 >gi|255318624|ref|ZP_05359855.1| DNA ligase, NAD-dependent [Acinetobacter radioresistens SK82] gi|255304306|gb|EET83492.1| DNA ligase, NAD-dependent [Acinetobacter radioresistens SK82] Length = 678 Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 32/57 (56%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L+++ H YY +D P +D YD + +L AL+EQ+P+L D P VG Sbjct: 10 QMRQLIQLIAQHNHAYYVMDQPSISDNEYDSLFHQLKALEEQYPDLVQNDTPTRRVG 66 >gi|84516174|ref|ZP_01003534.1| DNA ligase [Loktanella vestfoldensis SKA53] gi|84509870|gb|EAQ06327.1| DNA ligase [Loktanella vestfoldensis SKA53] Length = 722 Score = 47.0 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EAM+E+ L + Y+R D P +D YD + +R A++ +F EL Sbjct: 24 VADLTRAEAMVELARLAQTLAQANTAYHRNDTPEISDAAYDALKQRNAAIEARFRELKRA 83 Query: 111 DHPWNTVG 118 D P + VG Sbjct: 84 DSPSDQVG 91 >gi|73748436|ref|YP_307675.1| DNA ligase, NAD-dependent [Dehalococcoides sp. CBDB1] gi|123759761|sp|Q3ZX08|DNLJ_DEHSC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|73660152|emb|CAI82759.1| DNA ligase, NAD-dependent [Dehalococcoides sp. CBDB1] Length = 677 Score = 47.0 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +IEVE L + H + YY D+P +D YD + RL L+E PEL D P VG Sbjct: 5 LIEVENLRREINRHNQLYYVQDNPEISDAQYDTLIRRLKELEEAHPELVTPDSPTQKVG 63 >gi|289432483|ref|YP_003462356.1| DNA ligase, NAD-dependent [Dehalococcoides sp. GT] gi|288946203|gb|ADC73900.1| DNA ligase, NAD-dependent [Dehalococcoides sp. GT] Length = 680 Score = 47.0 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +IEVE L + H + YY D+P +D YD + RL L+E PEL D P VG Sbjct: 8 LIEVENLRREINRHNQLYYVQDNPEISDAQYDTLISRLKELEEAHPELVTPDSPTQKVG 66 >gi|90416525|ref|ZP_01224456.1| DNA ligase, NAD-dependent [marine gamma proteobacterium HTCC2207] gi|90331724|gb|EAS46952.1| DNA ligase, NAD-dependent [marine gamma proteobacterium HTCC2207] Length = 677 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 28/57 (49%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E E L H YY LD+P D YDR RL +++Q PEL +D P VG Sbjct: 11 EYEQLKDELNQHNHRYYVLDEPTIPDSEYDRSMRRLQDIEQQHPELLSDDSPSQRVG 67 >gi|307944884|ref|ZP_07660221.1| DNA ligase, NAD-dependent [Roseibium sp. TrichSKD4] gi|307771808|gb|EFO31032.1| DNA ligase, NAD-dependent [Roseibium sp. TrichSKD4] Length = 721 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L+ +A E+E L H K Y++ D P +D YD + R A++ +FP+L + Sbjct: 15 VEALTSEQAETELERLANAIAKHDKLYHQDDAPAISDADYDALRRRNTAIEARFPDLVRD 74 Query: 111 DHPWNTVG 118 D P VG Sbjct: 75 DSPSRNVG 82 >gi|319407493|emb|CBI81141.1| DNA ligase [Bartonella sp. 1-1C] Length = 725 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + +L+ EA E+E+L K H Y+R D P +D YD + R + ++ FPEL Sbjct: 6 IKNLTALEAASELEWLAKEIARHDVLYHRDDQPEISDAEYDALCRRNEEIEALFPELIRA 65 Query: 111 DHPWNTVG 118 D P + +G Sbjct: 66 DSPSSKIG 73 >gi|319404500|emb|CBI78105.1| DNA ligase [Bartonella rochalimae ATCC BAA-1498] Length = 725 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + +L+ EA E+E+L K H Y+R D P +D YD + R + ++ FPEL Sbjct: 6 IKNLTALEAASELEWLAKEIARHDVLYHRDDQPEISDAEYDALCRRNEEIEALFPELIRA 65 Query: 111 DHPWNTVG 118 D P + +G Sbjct: 66 DSPSSKIG 73 >gi|304392246|ref|ZP_07374188.1| DNA ligase, NAD-dependent [Ahrensia sp. R2A130] gi|303296475|gb|EFL90833.1| DNA ligase, NAD-dependent [Ahrensia sp. R2A130] Length = 716 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 28/46 (60%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ D P +DG YD + +R A++E+FP+L ED P N VG Sbjct: 33 HDARYHNDDAPTISDGAYDTLRKRNTAIEERFPDLVREDSPSNNVG 78 >gi|312140511|ref|YP_004007847.1| DNA ligase (nad+) liga [Rhodococcus equi 103S] gi|311889850|emb|CBH49167.1| DNA ligase (NAD+) LigA [Rhodococcus equi 103S] Length = 712 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 33/53 (62%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L ++ +HQ YY LD P+ +DG +D++ L+AL+E+ P+L D P VG Sbjct: 32 LAEVVRNHQFRYYVLDSPIVSDGEFDQLFGELNALEERHPDLRTPDSPTQLVG 84 >gi|325675870|ref|ZP_08155554.1| DNA ligase [Rhodococcus equi ATCC 33707] gi|325553841|gb|EGD23519.1| DNA ligase [Rhodococcus equi ATCC 33707] Length = 711 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 33/53 (62%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L ++ +HQ YY LD P+ +DG +D++ L+AL+E+ P+L D P VG Sbjct: 32 LAEVVRNHQFRYYVLDSPIVSDGEFDQLFGELNALEERHPDLRTPDSPTQLVG 84 >gi|147669216|ref|YP_001214034.1| DNA ligase, NAD-dependent [Dehalococcoides sp. BAV1] gi|190359250|sp|A5FRL4|DNLJ_DEHSB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|146270164|gb|ABQ17156.1| DNA ligase, NAD-dependent [Dehalococcoides sp. BAV1] Length = 680 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +IEVE L + H + YY D+P +D YD + RL L+E PEL D P VG Sbjct: 8 LIEVENLRREINRHNQLYYVQDNPEISDAQYDTLIRRLKELEEAHPELVTPDSPTQRVG 66 >gi|240168924|ref|ZP_04747583.1| NAD-dependent DNA ligase LigA [Mycobacterium kansasii ATCC 12478] Length = 683 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 21/46 (45%), Positives = 27/46 (58%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ TD +D + RL+ L+EQ+PEL D P VG Sbjct: 15 HQFRYYVRDAPIITDAEFDELLRRLEVLEEQYPELRTPDSPTQLVG 60 >gi|116334213|ref|YP_795740.1| NAD-dependent DNA ligase [Lactobacillus brevis ATCC 367] gi|122269104|sp|Q03Q13|DNLJ_LACBA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116099560|gb|ABJ64709.1| NAD-dependent DNA ligase [Lactobacillus brevis ATCC 367] Length = 676 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 34/70 (48%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K + +L+ +A E L L K YY D P D +YDRV RL AL+ FPE+ Sbjct: 4 KPIKTLTVEQAAEEAADLRPQLLEWGKQYYEADAPSVEDDVYDRVYARLVALETAFPEIV 63 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 64 TPDSPTQRVG 73 >gi|239832299|ref|ZP_04680628.1| DNA ligase, NAD-dependent [Ochrobactrum intermedium LMG 3301] gi|239824566|gb|EEQ96134.1| DNA ligase, NAD-dependent [Ochrobactrum intermedium LMG 3301] Length = 734 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA+ E+ L + HH + Y+ D P +D YD + R DA++ +FP L Sbjct: 21 VEKLTEPEAVSELGRLAREIAHHDELYHANDRPEISDAEYDALKRRNDAIEARFPHLVRT 80 Query: 111 DHPWNTVG 118 D P VG Sbjct: 81 DSPSLRVG 88 >gi|225018630|ref|ZP_03707822.1| hypothetical protein CLOSTMETH_02580 [Clostridium methylpentosum DSM 5476] gi|224948624|gb|EEG29833.1| hypothetical protein CLOSTMETH_02580 [Clostridium methylpentosum DSM 5476] Length = 659 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K +A + V L K +H YY LDDP +D YD + L+ L+ +FPEL ++ P Sbjct: 1 MDKKDAQLRVAELTKQLHYHSHRYYVLDDPEISDFDYDAMLRELETLEAEFPELRSDNSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TVRVG 65 >gi|89094416|ref|ZP_01167356.1| DNA ligase [Oceanospirillum sp. MED92] gi|89081308|gb|EAR60540.1| DNA ligase [Oceanospirillum sp. MED92] Length = 674 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 22/47 (46%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY LDDP D YDR+ L L+ PEL ED P VG Sbjct: 16 HHNYQYYVLDDPEVPDAEYDRLFRELKKLESDNPELITEDSPTQRVG 62 >gi|238792031|ref|ZP_04635667.1| DNA ligase [Yersinia intermedia ATCC 29909] gi|238728662|gb|EEQ20180.1| DNA ligase [Yersinia intermedia ATCC 29909] Length = 670 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 27/47 (57%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ ++L +L+ Q PEL D P VG Sbjct: 17 HHEHLYHVLDAPEIPDAEYDRLMQQLRSLEAQHPELITHDSPTQRVG 63 >gi|310823543|ref|YP_003955901.1| DNA ligase [Stigmatella aurantiaca DW4/3-1] gi|309396615|gb|ADO74074.1| DNA ligase [Stigmatella aurantiaca DW4/3-1] Length = 673 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 21/47 (44%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY LD P +D YDR+ L L+ QFP L D P VG Sbjct: 19 HHNHRYYVLDSPEVSDAEYDRLMRELQGLEAQFPALATPDSPTQRVG 65 >gi|269138493|ref|YP_003295193.1| NAD-dependent DNA ligase [Edwardsiella tarda EIB202] gi|267984153|gb|ACY83982.1| NAD-dependent DNA ligase [Edwardsiella tarda EIB202] gi|304558517|gb|ADM41181.1| DNA ligase [Edwardsiella tarda FL6-60] Length = 675 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L HH+ YY LD+P TD YDR+ +L L+ + P L D P VG Sbjct: 8 QLEQLRDALRHHEYQYYVLDEPQVTDAEYDRLMAQLKQLEAEHPALVTADSPSQRVG 64 >gi|258651684|ref|YP_003200840.1| DNA ligase, NAD-dependent [Nakamurella multipartita DSM 44233] gi|258554909|gb|ACV77851.1| DNA ligase, NAD-dependent [Nakamurella multipartita DSM 44233] Length = 736 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 23/53 (43%), Positives = 28/53 (52%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L +I Q YY LD P +DG +D V LD L+EQ+P L D P VG Sbjct: 30 LTQIITDAQFRYYVLDAPTMSDGEFDTVLRELDGLEEQYPSLRTPDSPTQRVG 82 >gi|304312656|ref|YP_003812254.1| DNA ligase, NAD-dependent [gamma proteobacterium HdN1] gi|301798389|emb|CBL46613.1| DNA ligase, NAD-dependent [gamma proteobacterium HdN1] Length = 677 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 21/46 (45%), Positives = 27/46 (58%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LDDP D YDR+ +RL AL++ P+L +D P VG Sbjct: 22 HNYRYYVLDDPSVPDSEYDRLFQRLLALEQAHPDLITQDSPTQRVG 67 >gi|239815926|ref|YP_002944836.1| DNA ligase, NAD-dependent [Variovorax paradoxus S110] gi|239802503|gb|ACS19570.1| DNA ligase, NAD-dependent [Variovorax paradoxus S110] Length = 694 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 71 LH-HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LH H YY LD P D YDR+ +RL AL+ ++PEL D P VG Sbjct: 18 LHKHAHLYYVLDAPELPDAEYDRLFQRLQALEAEYPELRTPDSPTQRVG 66 >gi|114705256|ref|ZP_01438164.1| DNA ligase, NAD-dependent [Fulvimarina pelagi HTCC2506] gi|114540041|gb|EAU43161.1| DNA ligase, NAD-dependent [Fulvimarina pelagi HTCC2506] Length = 821 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 34/68 (50%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L + EA E+E L + H + YY D P +D YD + R A++ +FP L Sbjct: 6 VENLDETEAASELERLAREIAEHDRAYYGDDAPTLSDADYDALRRRNTAIEARFPALIRA 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSKRVG 73 >gi|313903518|ref|ZP_07836909.1| DNA ligase, NAD-dependent [Thermaerobacter subterraneus DSM 13965] gi|313466339|gb|EFR61862.1| DNA ligase, NAD-dependent [Thermaerobacter subterraneus DSM 13965] Length = 817 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A VE L + HH YY LD P D YD + +L L+++FPEL D P VG Sbjct: 57 ARARVEALREQIRHHDYLYYVLDRPEIDDAAYDALMRQLRELEQRFPELVTPDSPTQRVG 116 >gi|258514074|ref|YP_003190296.1| DNA ligase, NAD-dependent [Desulfotomaculum acetoxidans DSM 771] gi|257777779|gb|ACV61673.1| DNA ligase, NAD-dependent [Desulfotomaculum acetoxidans DSM 771] Length = 677 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 27/46 (58%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY +D+P+ D YDR+ L AL++QFP+L E P VG Sbjct: 20 HNYNYYVMDNPVIGDAEYDRLMLELTALEQQFPDLLSEHSPTQRVG 65 >gi|209527955|ref|ZP_03276440.1| DNA ligase, NAD-dependent [Arthrospira maxima CS-328] gi|209491614|gb|EDZ91984.1| DNA ligase, NAD-dependent [Arthrospira maxima CS-328] Length = 680 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 20/42 (47%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P DG+YDR+ L L+ Q+PEL D P VG Sbjct: 31 YYVLDAPTMEDGVYDRLYRELQELETQYPELISPDSPTQRVG 72 >gi|167750769|ref|ZP_02422896.1| hypothetical protein EUBSIR_01747 [Eubacterium siraeum DSM 15702] gi|167656204|gb|EDS00334.1| hypothetical protein EUBSIR_01747 [Eubacterium siraeum DSM 15702] Length = 660 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K + E E L K A H YY LDDP D YDR+ R+ ++ + PE+ E P Sbjct: 1 MDKEQIKSEYEQLCKQAEQHNFNYYVLDDPTIEDDEYDRLMRRIKEIEAENPEIVSESSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQHVG 65 >gi|319793880|ref|YP_004155520.1| DNA ligase, NAD-dependent [Variovorax paradoxus EPS] gi|315596343|gb|ADU37409.1| DNA ligase, NAD-dependent [Variovorax paradoxus EPS] Length = 694 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 71 LH-HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LH H YY LD P D YD++ +RL AL+ +FPEL D P VG Sbjct: 18 LHKHAHLYYVLDAPELPDAEYDKLFQRLQALETEFPELRTPDSPTQRVG 66 >gi|307244055|ref|ZP_07526174.1| DNA ligase (NAD+) [Peptostreptococcus stomatis DSM 17678] gi|306492579|gb|EFM64613.1| DNA ligase (NAD+) [Peptostreptococcus stomatis DSM 17678] Length = 702 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 36/65 (55%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK EA + V L++I +H YY D P +D YDR+ + L L+E FPE +D P Sbjct: 22 ISKKEAGLMVGDLIEILNYHSDRYYNSDSPEISDMDYDRLMKSLILLEEAFPEYKKKDSP 81 Query: 114 WNTVG 118 VG Sbjct: 82 TVRVG 86 >gi|290476106|ref|YP_003469005.1| DNA ligase [Xenorhabdus bovienii SS-2004] gi|289175438|emb|CBJ82241.1| DNA ligase [Xenorhabdus bovienii SS-2004] Length = 672 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 58 EAMIE-VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E++IE + L HH+ Y+ +D P D YDR+ L L+EQ PEL D P Sbjct: 2 ESIIEKINKLRATLRHHEYLYHVMDAPEIPDAEYDRLLRELKVLEEQHPELITADSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|308375959|ref|ZP_07668156.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu007] gi|308344705|gb|EFP33556.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu007] Length = 614 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 33/61 (54%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + + + L + HQ YY D P+ +D +D + RL+AL+EQ PEL D P V Sbjct: 12 EVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLV 71 Query: 118 G 118 G Sbjct: 72 G 72 >gi|291530728|emb|CBK96313.1| DNA ligase, NAD-dependent [Eubacterium siraeum 70/3] Length = 660 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K + E E L K A H YY LDDP D YDR+ R+ ++ + PE+ E P Sbjct: 1 MDKEQIKSEYEQLCKQAEQHNFNYYVLDDPTIEDDEYDRLMRRIKEIEAENPEIVSESSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQHVG 65 >gi|215412865|ref|ZP_03421575.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis 94_M4241A] gi|298526485|ref|ZP_07013894.1| DNA ligase [NAD dependent] ligA [Mycobacterium tuberculosis 94_M4241A] gi|298496279|gb|EFI31573.1| DNA ligase [NAD dependent] ligA [Mycobacterium tuberculosis 94_M4241A] Length = 691 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 33/61 (54%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + + + L + HQ YY D P+ +D +D + RL+AL+EQ PEL D P V Sbjct: 12 EVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLV 71 Query: 118 G 118 G Sbjct: 72 G 72 >gi|147678862|ref|YP_001213077.1| NAD-dependent DNA ligase [Pelotomaculum thermopropionicum SI] gi|190359268|sp|A5CZ68|DNLJ_PELTS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|146274959|dbj|BAF60708.1| NAD-dependent DNA ligase [Pelotomaculum thermopropionicum SI] Length = 679 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 21/47 (44%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY LD P TD YDR+ L+ L++QFP L P VG Sbjct: 21 HHNYLYYVLDRPAITDAQYDRLMRELERLEKQFPALVTPYSPTQRVG 67 >gi|15610151|ref|NP_217530.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis H37Rv] gi|31794191|ref|NP_856684.1| NAD-dependent DNA ligase LigA [Mycobacterium bovis AF2122/97] gi|121638896|ref|YP_979120.1| NAD-dependent DNA ligase LigA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662865|ref|YP_001284388.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis H37Ra] gi|148824204|ref|YP_001288958.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis F11] gi|161350059|ref|NP_337609.2| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis CDC1551] gi|167967816|ref|ZP_02550093.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis H37Ra] gi|215431968|ref|ZP_03429887.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis EAS054] gi|219559049|ref|ZP_03538125.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis T17] gi|224991388|ref|YP_002646077.1| NAD-dependent DNA ligase [Mycobacterium bovis BCG str. Tokyo 172] gi|254365649|ref|ZP_04981694.1| DNA ligase [NAD dependent] ligA [Mycobacterium tuberculosis str. Haarlem] gi|260188040|ref|ZP_05765514.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis CPHL_A] gi|260206343|ref|ZP_05773834.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis K85] gi|289448688|ref|ZP_06438432.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis CPHL_A] gi|289553196|ref|ZP_06442406.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis KZN 605] gi|289571216|ref|ZP_06451443.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis T17] gi|289575722|ref|ZP_06455949.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis K85] gi|289755132|ref|ZP_06514510.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis EAS054] gi|294993895|ref|ZP_06799586.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis 210] gi|297635642|ref|ZP_06953422.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis KZN 4207] gi|297732640|ref|ZP_06961758.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis KZN R506] gi|306777310|ref|ZP_07415647.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu001] gi|306785860|ref|ZP_07424182.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu003] gi|306789901|ref|ZP_07428223.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu004] gi|306794711|ref|ZP_07433013.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu005] gi|306798954|ref|ZP_07437256.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu006] gi|306969091|ref|ZP_07481752.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu009] gi|306973427|ref|ZP_07486088.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu010] gi|307081136|ref|ZP_07490306.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu011] gi|307085740|ref|ZP_07494853.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu012] gi|313659972|ref|ZP_07816852.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis KZN V2475] gi|54036987|sp|P63973|DNLJ_MYCTU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|54036988|sp|P63974|DNLJ_MYCBO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166215822|sp|A1KN09|DNLJ_MYCBP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166216214|sp|A5U726|DNLJ_MYCTA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781375|sp|C1AGD0|DNLJ_MYCBT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|2791611|emb|CAA16099.1| PROBABLE DNA LIGASE [NAD DEPENDENT] LIGA (POLYDEOXYRIBONUCLEOTIDE SYNTHASE [NAD+]) [Mycobacterium tuberculosis H37Rv] gi|31619786|emb|CAD96726.1| PROBABLE DNA LIGASE [NAD DEPENDENT] LIGA (POLYDEOXYRIBONUCLEOTIDE SYNTHASE [NAD+]) [Mycobacterium bovis AF2122/97] gi|121494544|emb|CAL73025.1| Probable dna ligase [nad dependent] ligA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134151162|gb|EBA43207.1| DNA ligase [NAD dependent] ligA [Mycobacterium tuberculosis str. Haarlem] gi|148507017|gb|ABQ74826.1| DNA ligase (NAD dependent) LigA [Mycobacterium tuberculosis H37Ra] gi|148722731|gb|ABR07356.1| DNA ligase [NAD dependent] ligA [Mycobacterium tuberculosis F11] gi|224774503|dbj|BAH27309.1| NAD-dependent DNA ligase [Mycobacterium bovis BCG str. Tokyo 172] gi|289421646|gb|EFD18847.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis CPHL_A] gi|289437828|gb|EFD20321.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis KZN 605] gi|289540153|gb|EFD44731.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis K85] gi|289544970|gb|EFD48618.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis T17] gi|289695719|gb|EFD63148.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis EAS054] gi|308214358|gb|EFO73757.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu001] gi|308329532|gb|EFP18383.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu003] gi|308333670|gb|EFP22521.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu004] gi|308337029|gb|EFP25880.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu005] gi|308340842|gb|EFP29693.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu006] gi|308353381|gb|EFP42232.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu009] gi|308357226|gb|EFP46077.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu010] gi|308361179|gb|EFP50030.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu011] gi|308364771|gb|EFP53622.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu012] gi|323718395|gb|EGB27569.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis CDC1551A] gi|326904628|gb|EGE51561.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis W-148] gi|328457668|gb|AEB03091.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis KZN 4207] Length = 691 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 33/61 (54%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + + + L + HQ YY D P+ +D +D + RL+AL+EQ PEL D P V Sbjct: 12 EVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLV 71 Query: 118 G 118 G Sbjct: 72 G 72 >gi|259502571|ref|ZP_05745473.1| DNA ligase [Lactobacillus antri DSM 16041] gi|259169461|gb|EEW53956.1| DNA ligase [Lactobacillus antri DSM 16041] Length = 678 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 37/74 (50%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 +DK V L+ A E+ L + + YY D+P D +YDR +RL L+++F Sbjct: 1 MDKQTPVDQLTLAAAKQEIAPLRQQLTKWGREYYEQDNPSVEDYVYDRAYQRLVELEQRF 60 Query: 105 PELFDEDHPWNTVG 118 PEL D P VG Sbjct: 61 PELKTSDSPTQHVG 74 >gi|215405001|ref|ZP_03417182.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis 02_1987] gi|289746820|ref|ZP_06506198.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis 02_1987] gi|289687348|gb|EFD54836.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis 02_1987] Length = 691 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 33/61 (54%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + + + L + HQ YY D P+ +D +D + RL+AL+EQ PEL D P V Sbjct: 12 EVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLV 71 Query: 118 G 118 G Sbjct: 72 G 72 >gi|258592875|emb|CBE69184.1| DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) [NC10 bacterium 'Dutch sediment'] Length = 684 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 31/57 (54%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +V+ L ++ H+ YY LD P TD +D + +RL L+ Q PEL D P VG Sbjct: 10 QVDDLRQLIRRHEYLYYVLDRPEITDAEFDTLYQRLQTLETQHPELITPDSPTQRVG 66 >gi|115379272|ref|ZP_01466385.1| DNA ligase [Stigmatella aurantiaca DW4/3-1] gi|115363713|gb|EAU62835.1| DNA ligase [Stigmatella aurantiaca DW4/3-1] Length = 443 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/47 (44%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY LD P +D YDR+ L L+ QFP L D P VG Sbjct: 61 HHNHRYYVLDSPEVSDAEYDRLMRELQGLEAQFPALATPDSPTQRVG 107 >gi|268593162|ref|ZP_06127383.1| DNA ligase, NAD-dependent [Providencia rettgeri DSM 1131] gi|291311208|gb|EFE51661.1| DNA ligase, NAD-dependent [Providencia rettgeri DSM 1131] Length = 671 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 31/57 (54%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E++ L K HH+ Y+ LD P D YD++ +RL ++ Q PEL D P VG Sbjct: 6 EIDELKKQLRHHEYQYHVLDAPEIPDVEYDKLMQRLKEIEAQHPELVTSDSPTQRVG 62 >gi|326330727|ref|ZP_08197031.1| DNA ligase, NAD-dependent [Nocardioidaceae bacterium Broad-1] gi|325951568|gb|EGD43604.1| DNA ligase, NAD-dependent [Nocardioidaceae bacterium Broad-1] Length = 702 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 20/42 (47%), Positives = 26/42 (61%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LDDP +D +D+ R++ L+EQFPEL D P VG Sbjct: 31 YYVLDDPTLSDADFDQKWRRINELEEQFPELRTPDSPTQKVG 72 >gi|218754780|ref|ZP_03533576.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis GM 1503] gi|289763195|ref|ZP_06522573.1| DNA ligase [NAD dependent] ligA [Mycobacterium tuberculosis GM 1503] gi|289710701|gb|EFD74717.1| DNA ligase [NAD dependent] ligA [Mycobacterium tuberculosis GM 1503] Length = 690 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 33/61 (54%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + + + L + HQ YY D P+ +D +D + RL+AL+EQ PEL D P V Sbjct: 12 EVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLV 71 Query: 118 G 118 G Sbjct: 72 G 72 >gi|301063517|ref|ZP_07204049.1| DNA ligase (NAD(+)) [delta proteobacterium NaphS2] gi|300442456|gb|EFK06689.1| DNA ligase (NAD(+)) [delta proteobacterium NaphS2] Length = 671 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 31/57 (54%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E++ L + +H YY LDDP D YDR+ +RL L+ + PEL D P VG Sbjct: 7 EIDELKQKIEYHNHRYYVLDDPEIPDADYDRLFQRLLELETKHPELRSPDSPTRKVG 63 >gi|238919178|ref|YP_002932692.1| NAD-dependent DNA ligase LigA [Edwardsiella ictaluri 93-146] gi|238868746|gb|ACR68457.1| DNA ligase, NAD-dependent, putative [Edwardsiella ictaluri 93-146] Length = 672 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Query: 60 MIE--VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 MIE +E L HH+ YY LDDP TD YDR+ +L L+ P L D P V Sbjct: 1 MIEQQLEQLRDALRHHEYQYYVLDDPQITDAEYDRLMMQLKQLEAVHPALVTVDSPSQRV 60 Query: 118 G 118 G Sbjct: 61 G 61 >gi|116253034|ref|YP_768872.1| NAD-dependent DNA ligase LigA [Rhizobium leguminosarum bv. viciae 3841] gi|123261370|sp|Q1ME47|DNLJ_RHIL3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|115257682|emb|CAK08780.1| putative DNA ligase [Rhizobium leguminosarum bv. viciae 3841] Length = 718 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/47 (44%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH Y+ D P +D YD + R DAL+ +FPEL ED P VG Sbjct: 29 HHDALYHGKDQPEISDADYDALKRRNDALEVRFPELIREDSPSRHVG 75 >gi|49474446|ref|YP_032488.1| NAD-dependent DNA ligase LigA [Bartonella quintana str. Toulouse] gi|81646941|sp|Q6FZ81|DNLJ_BARQU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|49239950|emb|CAF26355.1| DNA ligase [Bartonella quintana str. Toulouse] Length = 719 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D+ K +T+L EA E+E+L K H Y R D P +D YD + R ++ FP Sbjct: 4 DEIKNLTAL---EAESELEWLAKEIARHDVLYNRDDQPEISDAEYDALRRRNAEIEALFP 60 Query: 106 ELFDEDHPWNTVG 118 EL D P + +G Sbjct: 61 ELIRSDSPSHKIG 73 >gi|331695637|ref|YP_004331876.1| DNA ligase [Pseudonocardia dioxanivorans CB1190] gi|326950326|gb|AEA24023.1| DNA ligase [Pseudonocardia dioxanivorans CB1190] Length = 812 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 28/46 (60%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY LD P+ +DG +D + L AL+E++P+L D P VG Sbjct: 40 HQFRYYVLDAPVVSDGQFDELWRELVALEERYPDLVSPDSPTQKVG 85 >gi|332162521|ref|YP_004299098.1| NAD-dependent DNA ligase LigA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606605|emb|CBY28103.1| DNA ligase [Yersinia enterocolitica subsp. palearctica Y11] gi|325666751|gb|ADZ43395.1| NAD-dependent DNA ligase LigA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860741|emb|CBX71032.1| DNA ligase [Yersinia enterocolitica W22703] Length = 672 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P VG Sbjct: 17 HHEHLYHVLDAPEIPDAEYDRLMQQLRELEAQHPELITNDSPTQRVG 63 >gi|299771367|ref|YP_003733393.1| DNA ligase, NAD-dependent [Acinetobacter sp. DR1] gi|298701455|gb|ADI92020.1| DNA ligase, NAD-dependent [Acinetobacter sp. DR1] Length = 679 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 31/57 (54%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L+++ H YY +D P +D YD + +L AL+EQ+P+ D P VG Sbjct: 9 QMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPDQVQSDSPTTKVG 65 >gi|284047985|ref|YP_003398324.1| DNA ligase, NAD-dependent [Acidaminococcus fermentans DSM 20731] gi|283952206|gb|ADB47009.1| DNA ligase, NAD-dependent [Acidaminococcus fermentans DSM 20731] Length = 675 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 35/68 (51%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 ++ ++K A ++ L + + YY D+PL TD YD + L AL+ ++PEL Sbjct: 1 MSEMTKEAAAARIDQLRAVMKKNSYLYYVQDNPLITDAEYDAMMRELKALEAEYPELVTP 60 Query: 111 DHPWNTVG 118 D P VG Sbjct: 61 DSPSQHVG 68 >gi|296046583|gb|ADG86433.1| NAD-dependent DNA ligase [Francisella novicida] Length = 673 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 29/57 (50%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +L H YY LD P D YDR+ ++L AL+ Q PEL D P VG Sbjct: 8 QINHLRSTLEQHSYNYYVLDTPSIPDAEYDRLLQQLSALETQHPELITADSPTQKVG 64 >gi|77360026|ref|YP_339601.1| NAD-dependent DNA ligase [Pseudoalteromonas haloplanktis TAC125] gi|123730523|sp|Q3IKB8|DNLJ_PSEHT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|76874937|emb|CAI86158.1| NAD-dependent DNA ligase [Pseudoalteromonas haloplanktis TAC125] Length = 673 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 29/57 (50%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +L H YY LD P D YDR+ ++L AL+ Q PEL D P VG Sbjct: 8 QINHLRSTLEQHSYNYYVLDTPSIPDAEYDRLLQQLSALETQHPELITADSPTQKVG 64 >gi|268316781|ref|YP_003290500.1| DNA ligase, NAD-dependent [Rhodothermus marinus DSM 4252] gi|262334315|gb|ACY48112.1| DNA ligase, NAD-dependent [Rhodothermus marinus DSM 4252] Length = 712 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Query: 29 TLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDG 88 T EA+ L L + + + + ++ + EA L ++ H YY LD+PL D Sbjct: 9 TAEARLLEATHTLLQTV-RQRDLEAIDRKEAEALAARLREVLNQHAYRYYVLDNPLIPDA 67 Query: 89 LYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YD + + L L+ +FPEL D P VG Sbjct: 68 DYDLLMQALRKLEARFPELVTPDSPTQRVG 97 >gi|123441550|ref|YP_001005536.1| NAD-dependent DNA ligase LigA [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166216254|sp|A1JLA4|DNLJ_YERE8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|122088511|emb|CAL11304.1| DNA ligase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 672 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P VG Sbjct: 17 HHEHLYHVLDAPEIPDAEYDRLMQQLRELEAQHPELITNDSPTQRVG 63 >gi|308377195|ref|ZP_07441467.2| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu008] gi|13882885|gb|AAK47423.1| DNA ligase [Mycobacterium tuberculosis CDC1551] gi|308348655|gb|EFP37506.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu008] Length = 679 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 21/46 (45%), Positives = 27/46 (58%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ +D +D + RL+AL+EQ PEL D P VG Sbjct: 15 HQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVG 60 >gi|1352292|sp|P49421|DNLJ_RHOMR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|607820|gb|AAA93198.1| DNA ligase [Rhodothermus marinus] Length = 712 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Query: 29 TLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDG 88 T EA+ L L + + + + ++ + EA L ++ H YY LD+PL D Sbjct: 9 TAEARLLEATHTLLQTV-RQRDLEAIDRKEAEALAARLREVLNQHAYRYYVLDNPLIPDA 67 Query: 89 LYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YD + + L L+ +FPEL D P VG Sbjct: 68 DYDLLMQALRKLEARFPELVTPDSPTQRVG 97 >gi|239618216|ref|YP_002941538.1| DNA ligase, NAD-dependent [Kosmotoga olearia TBF 19.5.1] gi|239507047|gb|ACR80534.1| DNA ligase, NAD-dependent [Kosmotoga olearia TBF 19.5.1] Length = 672 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 29/47 (61%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY L+DP+ TD YDR+ + L L++++PEL D P +G Sbjct: 20 YHAYRYYVLNDPIITDEEYDRMLKELQELEKKYPELITPDSPTQRIG 66 >gi|330808456|ref|YP_004352918.1| DNA ligase (NAD(+)) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376564|gb|AEA67914.1| DNA ligase (NAD(+)) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 785 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 21/47 (44%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+EQ PEL D P VG Sbjct: 17 QHNYRYHVLDEPSIPDAEYDRLFHELKALEEQHPELVTSDSPTQRVG 63 >gi|126736446|ref|ZP_01752187.1| DNA ligase, NAD-dependent [Roseobacter sp. CCS2] gi|126713984|gb|EBA10854.1| DNA ligase, NAD-dependent [Roseobacter sp. CCS2] Length = 715 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 35/68 (51%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V SLS +A E+ +L Y+R D P +D YD + R A++ QFP+L + Sbjct: 17 VASLSPEQATKELSWLATQLNAANTAYHRDDAPDISDATYDALKRRNAAIEAQFPDLKRQ 76 Query: 111 DHPWNTVG 118 D P TVG Sbjct: 77 DSPSETVG 84 >gi|289522353|ref|ZP_06439207.1| DNA ligase, NAD-dependent [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504189|gb|EFD25353.1| DNA ligase, NAD-dependent [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 674 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 31/62 (50%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 GEA E L K H +YY LD P+ TD YD + L L+ +FPE+ D P Sbjct: 6 GEAKKRAEELRKEIEKHNYYYYVLDSPVITDEEYDALYRGLVELERRFPEIITPDSPTQR 65 Query: 117 VG 118 VG Sbjct: 66 VG 67 >gi|238785571|ref|ZP_04629551.1| DNA ligase [Yersinia bercovieri ATCC 43970] gi|238713506|gb|EEQ05538.1| DNA ligase [Yersinia bercovieri ATCC 43970] Length = 670 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P VG Sbjct: 17 HHEHQYHVLDAPEIPDAEYDRLMQQLRDLESQHPELITSDSPTQRVG 63 >gi|319405996|emb|CBI79627.1| DNA ligase [Bartonella sp. AR 15-3] Length = 718 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + +L+ EA E+E+L K H Y+R D P +D YD + R + ++ FPEL Sbjct: 6 IKNLTALEAEGELEWLAKEIARHDVLYHRDDQPEISDAEYDALRRRNEEIEALFPELVRV 65 Query: 111 DHPWNTVG 118 D P + +G Sbjct: 66 DSPSSKIG 73 >gi|296285034|ref|ZP_06863032.1| DNA ligase [Citromicrobium bathyomarinum JL354] Length = 733 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 36/74 (48%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D+ LS+ EA E+ L + H + Y+ D P TD YD + R +AL+ FP Sbjct: 3 DQKDLAEPLSEAEAANELMRLARTIRKHNRLYHAEDAPEITDQEYDALVRRNEALEAAFP 62 Query: 106 ELFDEDHPWNTVGY 119 +L D P VG+ Sbjct: 63 DLVRPDSPSKGVGH 76 >gi|294085891|ref|YP_003552651.1| DNA ligase (NAD+) [Candidatus Puniceispirillum marinum IMCC1322] gi|292665466|gb|ADE40567.1| DNA ligase (NAD+) [Candidatus Puniceispirillum marinum IMCC1322] Length = 696 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 35/67 (52%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + +S +A E+ YL + +H + Y+ D P +D YD + R +AL+ FPEL D Sbjct: 9 SKMSADDAAQELAYLAERIAYHDRKYHGEDAPDISDADYDMLVARNNALEASFPELIRPD 68 Query: 112 HPWNTVG 118 P VG Sbjct: 69 SPSQRVG 75 >gi|226327977|ref|ZP_03803495.1| hypothetical protein PROPEN_01868 [Proteus penneri ATCC 35198] gi|225203681|gb|EEG86035.1| hypothetical protein PROPEN_01868 [Proteus penneri ATCC 35198] Length = 505 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L AL+ ++PEL D P VG Sbjct: 18 HHEYLYHVMDAPEIPDAEYDRLMNELKALEAEYPELITSDSPTQRVG 64 >gi|238759468|ref|ZP_04620632.1| DNA ligase [Yersinia aldovae ATCC 35236] gi|238702365|gb|EEP94918.1| DNA ligase [Yersinia aldovae ATCC 35236] Length = 670 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P VG Sbjct: 17 HHEHLYHVLDAPEIPDAEYDRLMQQLRELEAQHPELVTNDSPTQRVG 63 >gi|226305867|ref|YP_002765827.1| NAD(+)-dependent DNA ligase [Rhodococcus erythropolis PR4] gi|254781402|sp|C0ZXK3|DNLJ_RHOE4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|226184984|dbj|BAH33088.1| NAD(+)-dependent DNA ligase [Rhodococcus erythropolis PR4] Length = 700 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 29/47 (61%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ +DG +D + +L+AL+EQ+P+L D P VG Sbjct: 28 QHQFRYYVRDAPVISDGAFDTLLGQLNALEEQYPDLRTPDSPTQLVG 74 >gi|315445158|ref|YP_004078037.1| DNA ligase, NAD-dependent [Mycobacterium sp. Spyr1] gi|315263461|gb|ADU00203.1| DNA ligase, NAD-dependent [Mycobacterium sp. Spyr1] Length = 701 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 28/46 (60%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ TD +D++ RL AL++++PEL D P VG Sbjct: 28 HQFRYYIRDAPIITDAEFDQLLRRLQALEDEYPELRTPDSPTQLVG 73 >gi|296445905|ref|ZP_06887856.1| DNA ligase, NAD-dependent [Methylosinus trichosporium OB3b] gi|296256573|gb|EFH03649.1| DNA ligase, NAD-dependent [Methylosinus trichosporium OB3b] Length = 713 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V LS A +E L + + + YY+ DDP +D YD + +R +AL++ FPEL + Sbjct: 21 VAELSPRRAKLEHSRLAEEIAEYDRRYYQEDDPAISDAEYDALRQRYEALEKAFPELGGD 80 Query: 111 DHPWNTVG 118 TVG Sbjct: 81 ASLTKTVG 88 >gi|328950509|ref|YP_004367844.1| DNA ligase [Marinithermus hydrothermalis DSM 14884] gi|328450833|gb|AEB11734.1| DNA ligase [Marinithermus hydrothermalis DSM 14884] Length = 676 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 34/65 (52%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ EA V L + +H YY LDDP +D YD + L AL+ ++P+L D P Sbjct: 1 MTREEAKKRVLELRQAIRYHNYRYYVLDDPEISDAEYDALMRELKALEARYPDLVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQVVG 65 >gi|145224827|ref|YP_001135505.1| NAD-dependent DNA ligase LigA [Mycobacterium gilvum PYR-GCK] gi|190359265|sp|A4TDZ8|DNLJ_MYCGI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145217313|gb|ABP46717.1| DNA ligase, NAD-dependent [Mycobacterium gilvum PYR-GCK] Length = 712 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 28/46 (60%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ TD +D++ RL AL++++PEL D P VG Sbjct: 39 HQFRYYIRDAPIITDAEFDQLLRRLQALEDEYPELRTPDSPTQLVG 84 >gi|304415222|ref|ZP_07395930.1| DNA ligase (NAD(+)-dependent) [Candidatus Regiella insecticola LSR1] gi|304282928|gb|EFL91383.1| DNA ligase (NAD(+)-dependent) [Candidatus Regiella insecticola LSR1] Length = 674 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 27/50 (54%) Query: 69 IALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 I HH+ Y+ LD+P D YDR+ L L+ Q+PEL D P VG Sbjct: 14 ILQHHEYQYHVLDNPEIPDAEYDRLMNELRELETQYPELICADSPTQRVG 63 >gi|149915267|ref|ZP_01903795.1| DNA ligase, NAD-dependent [Roseobacter sp. AzwK-3b] gi|149810988|gb|EDM70827.1| DNA ligase, NAD-dependent [Roseobacter sp. AzwK-3b] Length = 720 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 36/71 (50%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 + V LS +A E+ L + Y+ D P+ +D YD + +R A++ +FP+L Sbjct: 16 RPVDKLSADQAAQELARLADLVAQADAAYHGQDAPIMSDAAYDALVQRNAAIEARFPDLM 75 Query: 109 DEDHPWNTVGY 119 ED P VG+ Sbjct: 76 REDSPSRRVGF 86 >gi|229493359|ref|ZP_04387148.1| DNA ligase, NAD-dependent [Rhodococcus erythropolis SK121] gi|229319675|gb|EEN85507.1| DNA ligase, NAD-dependent [Rhodococcus erythropolis SK121] Length = 700 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 29/47 (61%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ +DG +D + +L+AL+EQ+P+L D P VG Sbjct: 28 QHQFRYYVRDAPVISDGAFDTLLGQLNALEEQYPDLRTPDSPTQLVG 74 >gi|193212122|ref|YP_001998075.1| DNA ligase, NAD-dependent [Chlorobaculum parvum NCIB 8327] gi|254781284|sp|B3QLI5|DNLJ_CHLP8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|193085599|gb|ACF10875.1| DNA ligase, NAD-dependent [Chlorobaculum parvum NCIB 8327] Length = 674 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 9/74 (12%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 +DKAK + K A IE H + YY P +D +D++ ERL AL+ +F Sbjct: 1 MDKAKAQQEIGKLRAEIE---------RHNRLYYLEAKPEISDFEFDKLLERLIALETEF 51 Query: 105 PELFDEDHPWNTVG 118 PEL D P VG Sbjct: 52 PELVTPDSPSQRVG 65 >gi|260904918|ref|ZP_05913240.1| DNA ligase, NAD-dependent [Brevibacterium linens BL2] Length = 729 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 30/53 (56%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV+ + YY+ D PL D YD + RL+ L+E+FPEL + P TVG Sbjct: 29 LVEKIEEQRAAYYKDDSPLVADAEYDDLVHRLEDLEEKFPELVTDSSPTQTVG 81 >gi|325972726|ref|YP_004248917.1| DNA ligase, NAD-dependent [Spirochaeta sp. Buddy] gi|324027964|gb|ADY14723.1| DNA ligase, NAD-dependent [Spirochaeta sp. Buddy] Length = 696 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 33/57 (57%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ LV+ +QK YY + PL +D YDR+ +RL AL+ Q+P L D P VG Sbjct: 7 EIHSLVEQLASYQKAYYVDNRPLVSDLEYDRLFDRLVALETQYPHLKLADSPTQRVG 63 >gi|238765534|ref|ZP_04626449.1| DNA ligase [Yersinia kristensenii ATCC 33638] gi|238696249|gb|EEP89051.1| DNA ligase [Yersinia kristensenii ATCC 33638] Length = 670 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P VG Sbjct: 17 HHEHQYHVLDAPEIPDAEYDRLMQQLRDLEAQHPELITNDSPTQRVG 63 >gi|260887264|ref|ZP_05898527.1| DNA ligase, NAD-dependent [Selenomonas sputigena ATCC 35185] gi|330838979|ref|YP_004413559.1| DNA ligase, NAD-dependent [Selenomonas sputigena ATCC 35185] gi|260863326|gb|EEX77826.1| DNA ligase, NAD-dependent [Selenomonas sputigena ATCC 35185] gi|329746743|gb|AEC00100.1| DNA ligase, NAD-dependent [Selenomonas sputigena ATCC 35185] Length = 669 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 33/61 (54%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E E+ L + HH YY D+P +D YD++ +L AL+ ++PEL E+ P V Sbjct: 5 EVKKELAQLRRTIRHHNVRYYNDDNPEISDYEYDQLMLQLKALEREYPELITENSPTQKV 64 Query: 118 G 118 G Sbjct: 65 G 65 >gi|294102358|ref|YP_003554216.1| DNA ligase, NAD-dependent [Aminobacterium colombiense DSM 12261] gi|293617338|gb|ADE57492.1| DNA ligase, NAD-dependent [Aminobacterium colombiense DSM 12261] Length = 684 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + EA+ +E L + H YY LD P D YD + L +L+E FPE D D P Sbjct: 1 MDRREALQRIEALREEINRHAHLYYVLDTPEIADHEYDALFRELASLEEAFPEFDDPDSP 60 Query: 114 WNTVG 118 + VG Sbjct: 61 THRVG 65 >gi|238790828|ref|ZP_04634584.1| DNA ligase [Yersinia frederiksenii ATCC 33641] gi|238721075|gb|EEQ12759.1| DNA ligase [Yersinia frederiksenii ATCC 33641] Length = 670 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P VG Sbjct: 17 HHEHQYHVLDAPEIPDAEYDRLMQQLRDLEAQHPELITNDSPTQRVG 63 >gi|289208742|ref|YP_003460808.1| DNA ligase, NAD-dependent [Thioalkalivibrio sp. K90mix] gi|288944373|gb|ADC72072.1| DNA ligase, NAD-dependent [Thioalkalivibrio sp. K90mix] Length = 697 Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 33/67 (49%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 T+ + GE +E L + HH YY LDDP +D +D + L+ L+ P+L D Sbjct: 11 TTGAAGEVGERIEQLRRQIEHHNYRYYVLDDPEVSDAEFDALMRELEQLEADHPDLVTPD 70 Query: 112 HPWNTVG 118 P VG Sbjct: 71 SPTQRVG 77 >gi|238799224|ref|ZP_04642672.1| DNA ligase [Yersinia mollaretii ATCC 43969] gi|238716921|gb|EEQ08789.1| DNA ligase [Yersinia mollaretii ATCC 43969] Length = 670 Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P VG Sbjct: 17 HHEHQYHVLDAPEIPDAEYDRLMQQLRDLEAQHPELITSDSPTQRVG 63 >gi|251793989|ref|YP_003008721.1| NAD-dependent DNA ligase LigA [Aggregatibacter aphrophilus NJ8700] gi|247535388|gb|ACS98634.1| DNA ligase, NAD-dependent [Aggregatibacter aphrophilus NJ8700] Length = 671 Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 32/57 (56%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K +H+ Y+ LD+P D YDR+ +L AL++Q P L D P VG Sbjct: 8 QIDDLRKTLRYHEYQYHVLDEPQIPDSEYDRLFHQLKALEQQHPALITADSPTQRVG 64 >gi|312112463|ref|YP_003990779.1| DNA ligase, NAD-dependent [Geobacillus sp. Y4.1MC1] gi|311217564|gb|ADP76168.1| DNA ligase, NAD-dependent [Geobacillus sp. Y4.1MC1] Length = 670 Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 36/65 (55%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + A+ +E L ++ + YY LD P D YDR+ + L AL+EQ+P+L +D P Sbjct: 1 MERQAAIKRIEELRELLNQYNYEYYVLDRPSVPDSEYDRLMQELIALEEQYPDLKTKDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|295401729|ref|ZP_06811695.1| DNA ligase, NAD-dependent [Geobacillus thermoglucosidasius C56-YS93] gi|294976216|gb|EFG51828.1| DNA ligase, NAD-dependent [Geobacillus thermoglucosidasius C56-YS93] Length = 670 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 36/65 (55%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + A+ +E L ++ + YY LD P D YDR+ + L AL+EQ+P+L +D P Sbjct: 1 MERQAAIKRIEELRELLNQYNYEYYVLDRPSVPDSEYDRLMQELIALEEQYPDLKTKDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|116494557|ref|YP_806291.1| NAD-dependent DNA ligase [Lactobacillus casei ATCC 334] gi|122264017|sp|Q03AC3|DNLJ_LACC3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116104707|gb|ABJ69849.1| NAD-dependent DNA ligase [Lactobacillus casei ATCC 334] Length = 674 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 33/71 (46%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 AK + EA EVE L K + YY D P TD +YD L AL+E +P+L Sbjct: 3 AKPAAQFTLEEAQAEVEKLRKQLNQWRLEYYTKDAPTVTDNVYDDHYRDLQALEEAYPKL 62 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 63 VTPDSPTQEVG 73 >gi|49475845|ref|YP_033886.1| NAD-dependent DNA ligase LigA [Bartonella henselae str. Houston-1] gi|81647763|sp|Q6G2R5|DNLJ_BARHE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|49238653|emb|CAF27899.1| DNA ligase [Bartonella henselae str. Houston-1] Length = 716 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 35/69 (50%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 ++ +L+ EA E+E+L K H Y R D P +D YD + R ++ FPEL Sbjct: 5 EIQNLTALEAASELEWLAKEITRHDVLYNRNDQPEISDAEYDALRRRNAEIEALFPELIR 64 Query: 110 EDHPWNTVG 118 D P + +G Sbjct: 65 PDSPSHKIG 73 >gi|222149123|ref|YP_002550080.1| NAD-dependent DNA ligase LigA [Agrobacterium vitis S4] gi|254781248|sp|B9JY41|DNLJ_AGRVS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|221736108|gb|ACM37071.1| DNA ligase [Agrobacterium vitis S4] Length = 719 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 33/68 (48%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V LS+ +A E+ L HH Y+ D P +D YD + R DA++ +FP L Sbjct: 8 VEDLSEEQAGQELIRLAAAIAHHDALYHGKDQPEISDADYDALKRRNDAIEARFPTLVRS 67 Query: 111 DHPWNTVG 118 D P VG Sbjct: 68 DSPSQRVG 75 >gi|172036733|ref|YP_001803234.1| DNA ligase [Cyanothece sp. ATCC 51142] gi|254781304|sp|B1WZL6|DNLJ_CYAA5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|171698187|gb|ACB51168.1| DNA ligase [Cyanothece sp. ATCC 51142] Length = 676 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 27/42 (64%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LDDP+ D +YD++ LD+L+++ P+L D P VG Sbjct: 25 YYVLDDPIMEDAVYDQLYRELDSLEKEHPQLITPDSPTQRVG 66 >gi|301066103|ref|YP_003788126.1| NAD-dependent DNA ligase [Lactobacillus casei str. Zhang] gi|300438510|gb|ADK18276.1| NAD-dependent DNA ligase [Lactobacillus casei str. Zhang] Length = 674 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 33/71 (46%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 AK + EA EVE L K + YY D P TD +YD L AL+E +P+L Sbjct: 3 AKPAAQFTLEEAQAEVEKLRKQLNQWRLEYYTKDAPTVTDNVYDDHYRDLQALEEAYPKL 62 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 63 VTPDSPTQEVG 73 >gi|114767408|ref|ZP_01446210.1| DNA ligase, NAD-dependent [Pelagibaca bermudensis HTCC2601] gi|114540493|gb|EAU43572.1| DNA ligase, NAD-dependent [Roseovarius sp. HTCC2601] Length = 757 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +LS+ +A E+E L + Y+ D P +D YD + R A++E+FPEL E Sbjct: 15 VEALSEDQARAELERLAGLLAQANLAYHTEDAPEISDADYDALKRRNVAIEERFPELKRE 74 Query: 111 DHPWNTVG 118 D P VG Sbjct: 75 DSPSEQVG 82 >gi|306819948|ref|ZP_07453599.1| NAD-dependent DNA ligase LigA [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551984|gb|EFM39924.1| NAD-dependent DNA ligase LigA [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 675 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 36/61 (59%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EA +++E L + K YY D+P+ +D YD + +L +L+E++PEL D P N V Sbjct: 6 EARVKIEELKAEIEKNNKLYYEDDNPVISDYDYDMMMRQLISLEEKYPELKTPDSPSNRV 65 Query: 118 G 118 G Sbjct: 66 G 66 >gi|239631844|ref|ZP_04674875.1| NAD-dependent DNA ligase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526309|gb|EEQ65310.1| NAD-dependent DNA ligase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 674 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 33/71 (46%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 AK + EA EVE L K + YY D P TD +YD L AL+E +P+L Sbjct: 3 AKPAAQFTLEEAQAEVEKLRKQLNQWRLEYYTKDAPTVTDNVYDDHYRDLQALEEAYPKL 62 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 63 VTPDSPTQEVG 73 >gi|191637997|ref|YP_001987163.1| DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) [Lactobacillus casei BL23] gi|254781352|sp|B3WD54|DNLJ_LACCB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190712299|emb|CAQ66305.1| DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) [Lactobacillus casei BL23] gi|327382073|gb|AEA53549.1| DNA ligase [Lactobacillus casei LC2W] gi|327385217|gb|AEA56691.1| DNA ligase [Lactobacillus casei BD-II] Length = 674 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 33/71 (46%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 AK + EA EVE L K + YY D P TD +YD L AL+E +P+L Sbjct: 3 AKPAAQFTLEEAQAEVEKLRKQLNQWRLEYYTKDAPTVTDNVYDDHYRDLQALEEAYPKL 62 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 63 VTPDSPTQEVG 73 >gi|83590843|ref|YP_430852.1| DNA ligase, NAD-dependent [Moorella thermoacetica ATCC 39073] gi|123739230|sp|Q2RGY0|DNLJ_MOOTA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|83573757|gb|ABC20309.1| DNA ligase, NAD-dependent [Moorella thermoacetica ATCC 39073] Length = 666 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 30/56 (53%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 VE L ++ H YY LD P +D YD + + L AL+E +PEL D P VG Sbjct: 10 VEELRRLIEEHNYRYYVLDQPSISDREYDALMQELIALEEAYPELRTPDSPSQRVG 65 >gi|294677201|ref|YP_003577816.1| DNA ligase [Rhodobacter capsulatus SB 1003] gi|294476021|gb|ADE85409.1| DNA ligase (NAD(+)) [Rhodobacter capsulatus SB 1003] Length = 707 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 34/66 (51%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 SL++ EA EV LV Y+ LD P +D YD + RL A++ +FP+L D Sbjct: 12 SLTRAEAEAEVPELVARIEAANHAYHTLDAPKISDADYDALKRRLAAIEARFPDLARADS 71 Query: 113 PWNTVG 118 P VG Sbjct: 72 PTMRVG 77 >gi|51597030|ref|YP_071221.1| NAD-dependent DNA ligase LigA [Yersinia pseudotuberculosis IP 32953] gi|186896113|ref|YP_001873225.1| NAD-dependent DNA ligase LigA [Yersinia pseudotuberculosis PB1/+] gi|81638946|sp|Q668M6|DNLJ_YERPS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781913|sp|B2K917|DNLJ_YERPB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|51590312|emb|CAH21949.1| DNA ligase [Yersinia pseudotuberculosis IP 32953] gi|186699139|gb|ACC89768.1| DNA ligase, NAD-dependent [Yersinia pseudotuberculosis PB1/+] Length = 670 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P VG Sbjct: 17 HHEHQYHVLDAPEIPDAEYDRMMQQLRDLEAQHPELVTNDSPTQRVG 63 >gi|153948204|ref|YP_001400300.1| NAD-dependent DNA ligase LigA [Yersinia pseudotuberculosis IP 31758] gi|170023674|ref|YP_001720179.1| NAD-dependent DNA ligase LigA [Yersinia pseudotuberculosis YPIII] gi|190359300|sp|A7FGC2|DNLJ_YERP3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781915|sp|B1JFZ0|DNLJ_YERPY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|152959699|gb|ABS47160.1| DNA ligase, NAD-dependent [Yersinia pseudotuberculosis IP 31758] gi|169750208|gb|ACA67726.1| DNA ligase, NAD-dependent [Yersinia pseudotuberculosis YPIII] Length = 670 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P VG Sbjct: 17 HHEHQYHVLDAPEIPDAEYDRMMQQLRDLEAQHPELVTNDSPTQRVG 63 >gi|317180385|dbj|BAJ58171.1| NAD-dependent DNA ligase LigA [Helicobacter pylori F32] Length = 656 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL ++ HH YY LDDP+ +D +YD++ + L A +E+ P + P Sbjct: 4 SQKEYLERIEYLNTLS-HH---YYNLDDPIVSDAVYDKLYQELKAYEEKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|294504743|ref|YP_003568805.1| DNA ligase [Yersinia pestis Z176003] gi|262362805|gb|ACY59526.1| DNA ligase [Yersinia pestis D106004] gi|262366729|gb|ACY63286.1| DNA ligase [Yersinia pestis D182038] gi|294355202|gb|ADE65543.1| DNA ligase [Yersinia pestis Z176003] Length = 656 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P VG Sbjct: 3 HHEHQYHVLDAPEIPDAEYDRMMQQLRDLEAQHPELVTNDSPTQRVG 49 >gi|22125389|ref|NP_668812.1| NAD-dependent DNA ligase LigA [Yersinia pestis KIM 10] gi|45442391|ref|NP_993930.1| NAD-dependent DNA ligase LigA [Yersinia pestis biovar Microtus str. 91001] gi|108808172|ref|YP_652088.1| NAD-dependent DNA ligase LigA [Yersinia pestis Antiqua] gi|108811556|ref|YP_647323.1| NAD-dependent DNA ligase LigA [Yersinia pestis Nepal516] gi|145599373|ref|YP_001163449.1| NAD-dependent DNA ligase LigA [Yersinia pestis Pestoides F] gi|149365146|ref|ZP_01887181.1| DNA ligase [Yersinia pestis CA88-4125] gi|162420672|ref|YP_001607138.1| NAD-dependent DNA ligase LigA [Yersinia pestis Angola] gi|165926903|ref|ZP_02222735.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Orientalis str. F1991016] gi|165940356|ref|ZP_02228875.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Orientalis str. IP275] gi|166011271|ref|ZP_02232169.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Antiqua str. E1979001] gi|166212520|ref|ZP_02238555.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Antiqua str. B42003004] gi|167398917|ref|ZP_02304441.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421338|ref|ZP_02313091.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424444|ref|ZP_02316197.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470665|ref|ZP_02335369.1| DNA ligase, NAD-dependent [Yersinia pestis FV-1] gi|218930038|ref|YP_002347913.1| NAD-dependent DNA ligase LigA [Yersinia pestis CO92] gi|229838581|ref|ZP_04458740.1| DNA ligase, NAD(+)-dependent [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895648|ref|ZP_04510819.1| DNA ligase, NAD(+)-dependent [Yersinia pestis Pestoides A] gi|229899147|ref|ZP_04514290.1| DNA ligase, NAD(+)-dependent [Yersinia pestis biovar Orientalis str. India 195] gi|229901826|ref|ZP_04516947.1| DNA ligase, NAD(+)-dependent [Yersinia pestis Nepal516] gi|270490015|ref|ZP_06207089.1| DNA ligase (NAD(+)) [Yersinia pestis KIM D27] gi|122980211|sp|Q1CJV7|DNLJ_YERPN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|123372308|sp|Q1C5X9|DNLJ_YERPA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|123776939|sp|Q7CJF3|DNLJ_YERPE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166216255|sp|A4TMG4|DNLJ_YERPP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781914|sp|A9QZH0|DNLJ_YERPG RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|21958274|gb|AAM85063.1|AE013752_4 DNA ligase [Yersinia pestis KIM 10] gi|45437255|gb|AAS62807.1| DNA ligase [Yersinia pestis biovar Microtus str. 91001] gi|108775204|gb|ABG17723.1| DNA ligase [Yersinia pestis Nepal516] gi|108780085|gb|ABG14143.1| DNA ligase [Yersinia pestis Antiqua] gi|115348649|emb|CAL21593.1| DNA ligase [Yersinia pestis CO92] gi|145211069|gb|ABP40476.1| DNA ligase [Yersinia pestis Pestoides F] gi|149291559|gb|EDM41633.1| DNA ligase [Yersinia pestis CA88-4125] gi|162353487|gb|ABX87435.1| DNA ligase, NAD-dependent [Yersinia pestis Angola] gi|165911711|gb|EDR30369.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Orientalis str. IP275] gi|165921254|gb|EDR38478.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Orientalis str. F1991016] gi|165989949|gb|EDR42250.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Antiqua str. E1979001] gi|166206451|gb|EDR50931.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Antiqua str. B42003004] gi|166960827|gb|EDR56848.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051421|gb|EDR62829.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056326|gb|EDR66095.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680722|gb|EEO76817.1| DNA ligase, NAD(+)-dependent [Yersinia pestis Nepal516] gi|229687549|gb|EEO79622.1| DNA ligase, NAD(+)-dependent [Yersinia pestis biovar Orientalis str. India 195] gi|229694947|gb|EEO84994.1| DNA ligase, NAD(+)-dependent [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701454|gb|EEO89482.1| DNA ligase, NAD(+)-dependent [Yersinia pestis Pestoides A] gi|270338519|gb|EFA49296.1| DNA ligase (NAD(+)) [Yersinia pestis KIM D27] Length = 670 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P VG Sbjct: 17 HHEHQYHVLDAPEIPDAEYDRMMQQLRDLEAQHPELVTNDSPTQRVG 63 >gi|78043193|ref|YP_359946.1| DNA ligase, NAD-dependent [Carboxydothermus hydrogenoformans Z-2901] gi|123743192|sp|Q3AD38|DNLJ_CARHZ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|77995308|gb|ABB14207.1| DNA ligase, NAD-dependent [Carboxydothermus hydrogenoformans Z-2901] Length = 664 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 30/56 (53%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L + +H YY LD P +D YDR+ L +L++Q+PE D P VG Sbjct: 10 IEELRALLHYHNYRYYVLDQPEISDAEYDRMLRELISLEQQYPEFITPDSPSQRVG 65 >gi|288554984|ref|YP_003426919.1| NAD-dependent DNA ligase LigA [Bacillus pseudofirmus OF4] gi|288546144|gb|ADC50027.1| NAD-dependent DNA ligase LigA [Bacillus pseudofirmus OF4] Length = 668 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/42 (50%), Positives = 26/42 (61%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD PL TD YD++ + L AL+ + PEL ED P VG Sbjct: 24 YYVLDQPLVTDAEYDQLMQELIALEGEHPELVSEDSPSVRVG 65 >gi|320014458|gb|ADV98029.1| DNA ligase, NAD(+)-dependent [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 670 Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P VG Sbjct: 17 HHEHQYHVLDAPEIPDAEYDRMMQQLRDLEAQHPELVTNDSPTQRVG 63 >gi|261838144|gb|ACX97910.1| DNA ligase [Helicobacter pylori 51] Length = 656 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL ++ HH YY LDDP+ +D LYD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYLNTLS-HH---YYNLDDPIVSDALYDELYQELKAYEEKNPNGIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|71064896|ref|YP_263623.1| NAD dependent DNA ligase [Psychrobacter arcticus 273-4] gi|123734475|sp|Q4FUW9|DNLJ_PSYA2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|71037881|gb|AAZ18189.1| probable NAD dependent DNA ligase [Psychrobacter arcticus 273-4] Length = 691 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 +D AK +T+ + ++ + H YY LD+P+ D YD++ L L+E++ Sbjct: 13 IDTAKPITN--DDAIVTQMRTFIDTLKQHNYAYYVLDNPILEDSEYDQLRRSLLELEEEY 70 Query: 105 PELFDEDHPWNTVG 118 P+L D P N VG Sbjct: 71 PDLVQPDSPINQVG 84 >gi|163751929|ref|ZP_02159142.1| DNA ligase, NAD-dependent [Shewanella benthica KT99] gi|161328212|gb|EDP99377.1| DNA ligase, NAD-dependent [Shewanella benthica KT99] Length = 690 Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 28/46 (60%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 E+E+L+ H Y+ LDDP+ TD YDR+ +L L+ +FP L Sbjct: 11 EIEHLISEINEHDHRYHVLDDPIITDSEYDRLKIKLKKLENRFPAL 56 >gi|312173113|emb|CBX81368.1| DNA ligase [Erwinia amylovora ATCC BAA-2158] Length = 670 Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +L + H++ Y+ LD P D YDR+ L L+ Q+PEL D P VG Sbjct: 7 KITHLRTLLRHYEHQYHVLDAPTVPDAEYDRLMGELRELETQYPELLTSDSPTQRVG 63 >gi|292488952|ref|YP_003531839.1| DNA ligase [Erwinia amylovora CFBP1430] gi|292900089|ref|YP_003539458.1| DNA ligase [Erwinia amylovora ATCC 49946] gi|291199937|emb|CBJ47061.1| DNA ligase [Erwinia amylovora ATCC 49946] gi|291554386|emb|CBA21816.1| DNA ligase [Erwinia amylovora CFBP1430] Length = 670 Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +L + H++ Y+ LD P D YDR+ L L+ Q+PEL D P VG Sbjct: 7 KITHLRTLLRHYEHQYHVLDAPTVPDAEYDRLMGELRELETQYPELLTSDSPTQRVG 63 >gi|309389839|gb|ADO77719.1| DNA ligase, NAD-dependent [Halanaerobium praevalens DSM 2228] Length = 670 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 39/68 (57%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + +L+K +A ++ L + H+ Y+ LDDP +D +D++ + L L+ +FP+L E Sbjct: 1 MINLNKEKASKKITALKEKIRKHEYKYFVLDDPSISDAEFDQLMQELIKLESEFPDLITE 60 Query: 111 DHPWNTVG 118 D P VG Sbjct: 61 DSPTQRVG 68 >gi|292491548|ref|YP_003526987.1| DNA ligase, NAD-dependent [Nitrosococcus halophilus Nc4] gi|291580143|gb|ADE14600.1| DNA ligase, NAD-dependent [Nitrosococcus halophilus Nc4] Length = 675 Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 32/64 (50%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + +A VE L K+ + YY LD P+ D YDR+ L L+ Q+PEL D P Sbjct: 3 ATAQARERVETLRKLINDYNYNYYVLDSPVVPDSEYDRLMRELQNLEAQYPELVVPDSPT 62 Query: 115 NTVG 118 VG Sbjct: 63 QRVG 66 >gi|206895761|ref|YP_002246502.1| DNA ligase, NAD-dependent [Coprothermobacter proteolyticus DSM 5265] gi|254781298|sp|B5Y6V5|DNLJ_COPPD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|206738378|gb|ACI17456.1| DNA ligase, NAD-dependent [Coprothermobacter proteolyticus DSM 5265] Length = 666 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ EA +E L ++ +H YY LD P +D YD++ L L++QFPE D P Sbjct: 1 MTREEAKKRIERLRELIEYHNYRYYVLDSPEISDEEYDKLYRELVTLEKQFPEFITPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|307152955|ref|YP_003888339.1| NAD-dependent DNA ligase [Cyanothece sp. PCC 7822] gi|306983183|gb|ADN15064.1| DNA ligase, NAD-dependent [Cyanothece sp. PCC 7822] Length = 682 Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 26/42 (61%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+P+ D +YD++ L+ L+ Q+PEL D P VG Sbjct: 26 YYVLDNPIMEDAVYDQLYRELENLETQYPELITPDSPTQRVG 67 >gi|300724062|ref|YP_003713378.1| DNA ligase [Xenorhabdus nematophila ATCC 19061] gi|297630595|emb|CBJ91260.1| DNA ligase [Xenorhabdus nematophila ATCC 19061] Length = 658 Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L AL+EQ PE D P +G Sbjct: 3 HHEYLYHVMDAPEIPDAEYDRLMRELKALEEQHPEWVTADSPTQRIG 49 >gi|56479083|ref|YP_160672.1| NAD-dependent DNA ligase [Aromatoleum aromaticum EbN1] gi|81356392|sp|Q5NYU3|DNLJ_AZOSE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|56315126|emb|CAI09771.1| NAD-dependent DNA ligase [Aromatoleum aromaticum EbN1] Length = 681 Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 21/46 (45%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P D YDR+ LDAL+ + PEL D P VG Sbjct: 21 HDHAYYVLDAPTVPDAEYDRLFRELDALERRHPELLVPDSPTRRVG 66 >gi|239825842|ref|YP_002948466.1| NAD-dependent DNA ligase LigA [Geobacillus sp. WCH70] gi|239806135|gb|ACS23200.1| DNA ligase, NAD-dependent [Geobacillus sp. WCH70] Length = 670 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 34/60 (56%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 AM +E L ++ + YY LD P D YDR+ + L AL+EQ+P+L +D P VG Sbjct: 6 AMKRIEELRELLNKYNYEYYVLDRPSVPDAEYDRLMQELIALEEQYPDLKTKDSPSQRVG 65 >gi|296140594|ref|YP_003647837.1| DNA ligase, NAD-dependent [Tsukamurella paurometabola DSM 20162] gi|296028728|gb|ADG79498.1| DNA ligase, NAD-dependent [Tsukamurella paurometabola DSM 20162] Length = 688 Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 28/46 (60%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ +DG +D + +RL A+++ FPEL D P VG Sbjct: 23 HQFRYYVQDAPVLSDGEFDALLKRLQAMEDAFPELAVPDSPTKLVG 68 >gi|197285679|ref|YP_002151551.1| NAD-dependent DNA ligase LigA [Proteus mirabilis HI4320] gi|254781393|sp|B4EZR2|DNLJ_PROMH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|194683166|emb|CAR43788.1| DNA ligase [Proteus mirabilis HI4320] Length = 675 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ +L AL+ + PEL D P VG Sbjct: 18 HHEYLYHVMDAPEIPDAEYDRLMNKLKALEAEHPELITPDSPTQRVG 64 >gi|300743918|ref|ZP_07072938.1| DNA ligase, NAD-dependent [Rothia dentocariosa M567] gi|300380279|gb|EFJ76842.1| DNA ligase, NAD-dependent [Rothia dentocariosa M567] Length = 740 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 5/80 (6%) Query: 39 RALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 RAL++ LD + ++T + E E+ ++ A H YY+ D P +D YDR+ RL+ Sbjct: 14 RALKA-LDSSAELTDTIRAE-YAELTDTIRAARHD---YYQADAPTLSDAEYDRLYRRLE 68 Query: 99 ALQEQFPELFDEDHPWNTVG 118 ++ Q+P L D P VG Sbjct: 69 QIEAQYPALIANDSPTQEVG 88 >gi|154248881|ref|YP_001409706.1| DNA ligase, NAD-dependent [Fervidobacterium nodosum Rt17-B1] gi|190359256|sp|A7HJG6|DNLJ_FERNB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|154152817|gb|ABS60049.1| DNA ligase, NAD-dependent [Fervidobacterium nodosum Rt17-B1] Length = 681 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 33/57 (57%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EVE L K +H YY L P+ +D YD++ +RL L+E++PEL D P VG Sbjct: 9 EVEKLRKEIEYHNYRYYVLAQPVISDEEYDKLMKRLMELEEKYPELKTPDSPTQRVG 65 >gi|227356188|ref|ZP_03840577.1| DNA ligase [Proteus mirabilis ATCC 29906] gi|227163652|gb|EEI48568.1| DNA ligase [Proteus mirabilis ATCC 29906] Length = 675 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ +L AL+ + PEL D P VG Sbjct: 18 HHEYLYHVMDAPEIPDAEYDRLMNKLKALEAEHPELITPDSPTQRVG 64 >gi|11095423|gb|AAG29863.1|AF313764_6 DNA ligase [Zymomonas mobilis subsp. mobilis ZM4] gi|49284|emb|CAA77966.1| DNA ligase [Zymomonas mobilis subsp. mobilis CP4] gi|382210|prf||1819268B DNA ligase Length = 731 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 37/66 (56%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +LS+ +A+IE+E L K+ H+ Y+ D+P D YD + R +++ FP+L D Sbjct: 25 NLSREQAVIELERLAKLISHYDHLYHDKDNPAVPDSEYDALVLRNRRIEQFFPDLIRPDS 84 Query: 113 PWNTVG 118 P VG Sbjct: 85 PSKKVG 90 >gi|330466191|ref|YP_004403934.1| DNA ligase [Verrucosispora maris AB-18-032] gi|328809162|gb|AEB43334.1| DNA ligase, NAD-dependent [Verrucosispora maris AB-18-032] Length = 717 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 21/46 (45%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY LD P +D +DR L AL+E+FP L D P VG Sbjct: 46 HQYRYYVLDAPTVSDAEFDRQLRELTALEEEFPALRTPDSPTQRVG 91 >gi|158421773|ref|YP_001523065.1| NAD-dependent DNA ligase [Azorhizobium caulinodans ORS 571] gi|190359227|sp|A8IGY0|DNLJ_AZOC5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|158328662|dbj|BAF86147.1| NAD-dependent DNA ligase [Azorhizobium caulinodans ORS 571] Length = 739 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%) Query: 37 NKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSER 96 N+ AL + + K V+ LS EA E L + H YY+ D P+ +D YDR+ R Sbjct: 4 NRPALPT---RDKAVSDLSATEASDEHAALSQEIASHDARYYQEDAPVISDADYDRLRRR 60 Query: 97 LDALQEQFPELFDEDHPWNTVG 118 + ++ +FP L ++D VG Sbjct: 61 YEDIEARFPALKNDDSLSRKVG 82 >gi|317153517|ref|YP_004121565.1| DNA ligase, NAD-dependent [Desulfovibrio aespoeensis Aspo-2] gi|316943768|gb|ADU62819.1| DNA ligase, NAD-dependent [Desulfovibrio aespoeensis Aspo-2] Length = 678 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ E + +L + HH YY LDDP +D YD + L AL+ PEL D + P Sbjct: 1 MASSEIIDRAAWLRERIEHHNHRYYVLDDPEISDAEYDALFRELAALEAAHPELDDANSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TRRVG 65 >gi|227432449|ref|ZP_03914436.1| NAD-dependent DNA ligase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351770|gb|EEJ42009.1| NAD-dependent DNA ligase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 680 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 34/68 (50%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + L+ +A E L K + + YY D PL D +YD + RL AL+E+FP+ Sbjct: 8 IEKLTTQDAQQETARLQKQLVQYGTAYYEDDAPLVEDYIYDALYARLVALEEKFPQYVIP 67 Query: 111 DHPWNTVG 118 D P VG Sbjct: 68 DSPTQNVG 75 >gi|116617684|ref|YP_818055.1| NAD-dependent DNA ligase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122272115|sp|Q03YP0|DNLJ_LEUMM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116096531|gb|ABJ61682.1| NAD-dependent DNA ligase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 680 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 34/68 (50%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + L+ +A E L K + + YY D PL D +YD + RL AL+E+FP+ Sbjct: 8 IEKLTTQDAQQETARLQKQLVQYGTAYYEDDAPLVEDYIYDALYARLVALEEKFPQYVIP 67 Query: 111 DHPWNTVG 118 D P VG Sbjct: 68 DSPTQNVG 75 >gi|313673736|ref|YP_004051847.1| DNA ligase, nad-dependent [Calditerrivibrio nitroreducens DSM 19672] gi|312940492|gb|ADR19684.1| DNA ligase, NAD-dependent [Calditerrivibrio nitroreducens DSM 19672] Length = 655 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 32/58 (55%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 + + LVK HH YY L+DP +D YD + ++L ++E+ PE D P VG+ Sbjct: 7 DYDRLVKELNHHCIRYYLLNDPAISDAKYDNLYKQLRKIEEEHPEWISPDSPTQRVGF 64 >gi|160872442|ref|ZP_02062574.1| DNA ligase, NAD-dependent [Rickettsiella grylli] gi|159121241|gb|EDP46579.1| DNA ligase, NAD-dependent [Rickettsiella grylli] Length = 674 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 26/46 (56%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD PL D YD + L+A+++++PEL D P VG Sbjct: 22 HNYHYYILDAPLINDATYDTLFRELEAIEKRYPELITPDSPTQRVG 67 >gi|83647417|ref|YP_435852.1| DNA ligase, NAD-dependent [Hahella chejuensis KCTC 2396] gi|123767368|sp|Q2SD47|DNLJ_HAHCH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|83635460|gb|ABC31427.1| DNA ligase, NAD-dependent [Hahella chejuensis KCTC 2396] Length = 683 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LDDP D YDR+ RL ++ +FP+ D P VG Sbjct: 22 HNYRYYTLDDPSIPDAEYDRLMRRLREIEAEFPQTITPDSPTQRVG 67 >gi|302337851|ref|YP_003803057.1| DNA ligase, NAD-dependent [Spirochaeta smaragdinae DSM 11293] gi|301635036|gb|ADK80463.1| DNA ligase, NAD-dependent [Spirochaeta smaragdinae DSM 11293] Length = 703 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 33/63 (52%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 K +A EV L + + + YY P +D YDR+ RL L+EQ+PEL ED P Sbjct: 9 KEKATEEVRRLADLLFRYNRAYYIEGKPEVSDTEYDRLFLRLQELEEQWPELKREDSPTL 68 Query: 116 TVG 118 VG Sbjct: 69 RVG 71 >gi|94986686|ref|YP_594619.1| NAD-dependent DNA ligase [Lawsonia intracellularis PHE/MN1-00] gi|123385090|sp|Q1MRS8|DNLJ_LAWIP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|94730935|emb|CAJ54298.1| NAD-dependent DNA ligase (contains BRCT domain type II) [Lawsonia intracellularis PHE/MN1-00] Length = 682 Score = 43.9 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 30/66 (45%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 SL + V L K HH YY LDDP +D YD+ + L L+ FP L + Sbjct: 9 SLPSKKEKQRVRELRKFINHHNYLYYTLDDPEISDSEYDKAFQELLTLENTFPSLKTNNS 68 Query: 113 PWNTVG 118 P VG Sbjct: 69 PTQKVG 74 >gi|56551260|ref|YP_162099.1| DNA ligase, NAD-dependent [Zymomonas mobilis subsp. mobilis ZM4] gi|59802648|sp|P28719|DNLJ_ZYMMO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|56542834|gb|AAV88988.1| DNA ligase, NAD-dependent [Zymomonas mobilis subsp. mobilis ZM4] Length = 731 Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 36/65 (55%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 LS+ +A+IE+E L K+ H+ Y+ D+P D YD + R +++ FP+L D P Sbjct: 26 LSREQAVIELERLAKLISHYDHLYHDKDNPAVPDSEYDALVLRNRRIEQFFPDLIRPDSP 85 Query: 114 WNTVG 118 VG Sbjct: 86 SKKVG 90 >gi|317179023|dbj|BAJ56811.1| NAD-dependent DNA ligase LigA [Helicobacter pylori F30] Length = 657 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL ++ HH YY LDDP+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYLNTLS-HH---YYNLDDPIVSDAIYDELYQELKAYEEKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|307718507|ref|YP_003874039.1| DNA ligase [Spirochaeta thermophila DSM 6192] gi|306532232|gb|ADN01766.1| DNA ligase [Spirochaeta thermophila DSM 6192] Length = 673 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 34/65 (52%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ EA E++ LV++ YY L P TD YD + +RL L+ QFP L D P Sbjct: 1 MTEQEAKKEIDRLVELLQRADYEYYVLGRPHLTDQEYDSLFDRLKTLEAQFPHLKRADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|260912664|ref|ZP_05919150.1| DNA ligase [Pasteurella dagmatis ATCC 43325] gi|260633042|gb|EEX51207.1| DNA ligase [Pasteurella dagmatis ATCC 43325] Length = 673 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 31/57 (54%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+E L K ++ Y+ LD+P D YDR+ +L L+ ++P+ ED P VG Sbjct: 8 EMEQLRKTLRRYEYQYHVLDNPTVPDAEYDRLFHQLKKLEREYPQFITEDSPTQRVG 64 >gi|192361192|ref|YP_001982383.1| DNA ligase, NAD-dependent [Cellvibrio japonicus Ueda107] gi|254781281|sp|B3PGQ8|DNLJ_CELJU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190687357|gb|ACE85035.1| DNA ligase, NAD-dependent [Cellvibrio japonicus Ueda107] Length = 680 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 29/57 (50%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L + +H YY LD+P D YDR+ +RL L+ Q+P D P VG Sbjct: 13 EIAQLREQIRYHNYRYYALDEPQIPDAEYDRLMQRLRELEAQYPASVTPDSPTQRVG 69 >gi|121533514|ref|ZP_01665342.1| DNA ligase, NAD-dependent [Thermosinus carboxydivorans Nor1] gi|121308073|gb|EAX48987.1| DNA ligase, NAD-dependent [Thermosinus carboxydivorans Nor1] Length = 673 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A E E L + +H YY LD P +D +D + RL A++E +P L D P V Sbjct: 11 QAAREAEQLRRQIHYHNHRYYVLDAPEISDAEFDALMRRLIAIEEAYPSLITPDSPTQRV 70 Query: 118 G 118 G Sbjct: 71 G 71 >gi|227498670|ref|ZP_03928814.1| DNA ligase [Acidaminococcus sp. D21] gi|226904126|gb|EEH90044.1| DNA ligase [Acidaminococcus sp. D21] Length = 674 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++K EA+++ + L K + YY D P TD YD + +L A++ ++PEL D P Sbjct: 1 MTKQEALLKAQALRKELERNSYLYYVEDMPTITDAEYDSLMRQLRAIEAEYPELVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQHVG 65 >gi|221066629|ref|ZP_03542734.1| DNA ligase, NAD-dependent [Comamonas testosteroni KF-1] gi|220711652|gb|EED67020.1| DNA ligase, NAD-dependent [Comamonas testosteroni KF-1] Length = 708 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Query: 70 ALHHQKW-----YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 AL Q W YY LD P DG YDRV ++L+AL+ +P L D P V Sbjct: 35 ALRAQLWQWAHEYYVLDAPTVPDGEYDRVYQQLEALEGAYPALVTPDSPTQRV 87 >gi|114327083|ref|YP_744240.1| NAD-dependent DNA ligase [Granulibacter bethesdensis CGDNIH1] gi|122327935|sp|Q0BV35|DNLJ_GRABC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|114315257|gb|ABI61317.1| NAD-dependent DNA ligase [Granulibacter bethesdensis CGDNIH1] Length = 700 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 33/66 (50%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +LS EA E+E L YYR D PL TD YD + +R ++ FP+ ++ Sbjct: 16 ALSPAEARAELERLASRIAELDDAYYRDDAPLVTDADYDALRQRNAEIERLFPDAILKNS 75 Query: 113 PWNTVG 118 P N VG Sbjct: 76 PANRVG 81 >gi|93005182|ref|YP_579619.1| DNA ligase, NAD-dependent [Psychrobacter cryohalolentis K5] gi|122989955|sp|Q1QDW8|DNLJ_PSYCK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|92392860|gb|ABE74135.1| DNA ligase, NAD-dependent [Psychrobacter cryohalolentis K5] Length = 691 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 27/46 (58%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P+ D YD++ L L+E++P+L D P N VG Sbjct: 39 HNYAYYVLDNPILEDSEYDQLRRSLLELEEEYPDLIQPDSPINQVG 84 >gi|315498681|ref|YP_004087485.1| DNA ligase, nad-dependent [Asticcacaulis excentricus CB 48] gi|315416693|gb|ADU13334.1| DNA ligase, NAD-dependent [Asticcacaulis excentricus CB 48] Length = 697 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ YY + P TD YD + + L AL+ Q+P+L D P VG Sbjct: 22 HHRDLYYNQEAPELTDAEYDALEQELRALEAQYPDLHTVDSPTEQVG 68 >gi|317181928|dbj|BAJ59712.1| NAD-dependent DNA ligase LigA [Helicobacter pylori F57] Length = 656 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL ++ HH YY LDDP+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYLNTLS-HH---YYNLDDPIVSDAVYDELYQELKAYEEKNPNSIQSNSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|300717845|ref|YP_003742648.1| DNA ligase [Erwinia billingiae Eb661] gi|299063681|emb|CAX60801.1| DNA ligase [Erwinia billingiae Eb661] Length = 672 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +DDP D YDR+ L L++ PEL D P VG Sbjct: 17 HHEYQYHVMDDPEVPDAEYDRLMRELRELEQAHPELVTADSPTQRVG 63 >gi|302670775|ref|YP_003830735.1| NAD-dependent DNA ligase LigA1 [Butyrivibrio proteoclasticus B316] gi|302395248|gb|ADL34153.1| NAD-dependent DNA ligase LigA1 [Butyrivibrio proteoclasticus B316] Length = 675 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 28/53 (52%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV HH YY D+P +D YD++ RL ++ ++PEL D P VG Sbjct: 15 LVSEIKHHMDLYYNQDEPEISDYEYDQLMIRLKKMESEYPELVSNDSPSQIVG 67 >gi|300114089|ref|YP_003760664.1| DNA ligase, NAD-dependent [Nitrosococcus watsonii C-113] gi|299540026|gb|ADJ28343.1| DNA ligase, NAD-dependent [Nitrosococcus watsonii C-113] Length = 675 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY +D+PL D YDR+ L L+E +PEL D P VG Sbjct: 25 YYVMDNPLIPDSEYDRLIRELRVLEENYPELITLDSPTQRVG 66 >gi|294506892|ref|YP_003570950.1| NAD-dependent DNA ligase [Salinibacter ruber M8] gi|294343220|emb|CBH23998.1| NAD-dependent DNA ligase [Salinibacter ruber M8] Length = 691 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 28/47 (59%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY LD P+ +D YDR+ ++L L+ ++P L D P + VG Sbjct: 34 HHNYRYYVLDAPVVSDAEYDRLFQQLQTLEAEYPGLQTPDSPTHQVG 80 >gi|253999028|ref|YP_003051091.1| DNA ligase, NAD-dependent [Methylovorus sp. SIP3-4] gi|253985707|gb|ACT50564.1| DNA ligase, NAD-dependent [Methylovorus sp. SIP3-4] Length = 699 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 5/83 (6%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 P++ AL D A + + E I + +I L++ + YY LDDP D YDR+ Sbjct: 6 PSQGAL---FDNAPATVTFATPEVQIR-QLREQINLYNYQ-YYVLDDPSVPDSEYDRLFR 60 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L AL+ PEL D P VG Sbjct: 61 ELQALEHAHPELLTPDSPTQRVG 83 >gi|6561410|gb|AAF16907.1|AF173987_5 DNA ligase [Rhodothermus marinus DSM 4252] Length = 154 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Query: 29 TLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDG 88 T EA+ L L + + + + ++ + EA L ++ H YY LD+PL D Sbjct: 9 TAEARLLEATHTLLQTV-RQRDLEAIDRKEAEALAARLREVLNQHAYRYYVLDNPLIPDA 67 Query: 89 LYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YD + + L L+ +FPEL D P VG Sbjct: 68 DYDLLMQALRKLEARFPELVTPDSPTQRVG 97 >gi|299139723|ref|ZP_07032896.1| DNA ligase, NAD-dependent [Acidobacterium sp. MP5ACTX8] gi|298598347|gb|EFI54512.1| DNA ligase, NAD-dependent [Acidobacterium sp. MP5ACTX8] Length = 723 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 28/57 (49%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L + HH+ YY LD P TD YD L L+ + PEL D P VG Sbjct: 14 QIEALREDLRHHEHLYYVLDAPELTDAQYDARMNELRRLETEHPELVTPDSPTQRVG 70 >gi|293395040|ref|ZP_06639327.1| DNA ligase [Serratia odorifera DSM 4582] gi|291422447|gb|EFE95689.1| DNA ligase [Serratia odorifera DSM 4582] Length = 673 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ L L+E PEL D P VG Sbjct: 17 HHEYLYHVLDAPEIPDAEYDRLMRELRTLEEAHPELITADSPTQRVG 63 >gi|13508096|ref|NP_110045.1| DNA ligase [Mycoplasma pneumoniae M129] gi|2494169|sp|P78021|DNLJ_MYCPN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|1674170|gb|AAB96127.1| DNA ligase [Mycoplasma pneumoniae M129] Length = 658 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 27/42 (64%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LDDPL +D YD++ ++L AL++ PEL D P VG Sbjct: 21 YYVLDDPLVSDFEYDQLYKQLQALEQAHPELIQPDSPTQRVG 62 >gi|301633469|gb|ADK87023.1| DNA ligase (NAD(+)) [Mycoplasma pneumoniae FH] Length = 658 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 27/42 (64%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LDDPL +D YD++ ++L AL++ PEL D P VG Sbjct: 21 YYVLDDPLVSDFEYDQLYKQLQALEQAHPELIQPDSPTQRVG 62 >gi|120554094|ref|YP_958445.1| DNA ligase, NAD-dependent [Marinobacter aquaeolei VT8] gi|166215819|sp|A1TZT9|DNLJ_MARAV RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|120323943|gb|ABM18258.1| DNA ligase, NAD-dependent [Marinobacter aquaeolei VT8] Length = 678 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H +YY DDP D YDR+ L L+ + PEL ED P VG Sbjct: 22 HNYYYYVQDDPRIPDAEYDRLFRELQKLEAEHPELATEDSPTRRVG 67 >gi|120403104|ref|YP_952933.1| NAD-dependent DNA ligase LigA [Mycobacterium vanbaalenii PYR-1] gi|166216216|sp|A1T6X7|DNLJ_MYCVP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|119955922|gb|ABM12927.1| DNA ligase, NAD-dependent [Mycobacterium vanbaalenii PYR-1] Length = 707 Score = 43.5 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 21/46 (45%), Positives = 26/46 (56%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ TD +D + RL+AL+E PEL D P VG Sbjct: 39 HQFRYYVRDAPIITDAEFDAMLRRLEALEEAHPELRTPDSPTQLVG 84 >gi|261839558|gb|ACX99323.1| NAD-dependent DNA ligase LigA [Helicobacter pylori 52] Length = 657 Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL ++ HH YY LDDP+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYLNTLS-HH---YYNLDDPIVSDAVYDELYQELKAYEEKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|83816597|ref|YP_445022.1| DNA ligase, NAD-dependent [Salinibacter ruber DSM 13855] gi|123739757|sp|Q2S459|DNLJ_SALRD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|83757991|gb|ABC46104.1| DNA ligase, NAD-dependent [Salinibacter ruber DSM 13855] Length = 690 Score = 43.5 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 28/47 (59%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY LD P+ +D YDR+ ++L L+ ++P L D P + VG Sbjct: 34 HHNYRYYVLDAPVVSDAEYDRLFQQLQTLEAEYPVLQTPDSPTHQVG 80 >gi|258542980|ref|YP_003188413.1| DNA ligase [Acetobacter pasteurianus IFO 3283-01] gi|256634058|dbj|BAI00034.1| DNA ligase [Acetobacter pasteurianus IFO 3283-01] gi|256637118|dbj|BAI03087.1| DNA ligase [Acetobacter pasteurianus IFO 3283-03] gi|256640170|dbj|BAI06132.1| DNA ligase [Acetobacter pasteurianus IFO 3283-07] gi|256643227|dbj|BAI09182.1| DNA ligase [Acetobacter pasteurianus IFO 3283-22] gi|256646282|dbj|BAI12230.1| DNA ligase [Acetobacter pasteurianus IFO 3283-26] gi|256649335|dbj|BAI15276.1| DNA ligase [Acetobacter pasteurianus IFO 3283-32] gi|256652321|dbj|BAI18255.1| DNA ligase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655379|dbj|BAI21306.1| DNA ligase [Acetobacter pasteurianus IFO 3283-12] Length = 685 Score = 43.5 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ +A E+E L HH YYR D P +D YD + R DA+ Q PE E+ Sbjct: 1 MTQQQAREELERLAAEIAHHNAAYYRNDAPEISDAEYDALRRRYDAIVAQHPEAEPENSA 60 Query: 114 WNTVG 118 VG Sbjct: 61 AQAVG 65 >gi|297379814|gb|ADI34701.1| DNA ligase, NAD-dependent [Helicobacter pylori v225d] Length = 656 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL ++ HH YY LDDP+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYLNTLS-HH---YYNLDDPIVSDAVYDELYQELKAYEEKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|325293451|ref|YP_004279315.1| DNA ligase [Agrobacterium sp. H13-3] gi|325061304|gb|ADY64995.1| DNA ligase [Agrobacterium sp. H13-3] Length = 724 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 34/69 (49%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L++ EA E+ +L H Y+ D P +D YD + R DA++ FP L Sbjct: 8 VENLTELEASSELAFLAAELARHDALYHGKDAPEISDADYDALKRRNDAIEAAFPALVRA 67 Query: 111 DHPWNTVGY 119 D P VG+ Sbjct: 68 DSPSKKVGF 76 >gi|317177554|dbj|BAJ55343.1| NAD-dependent DNA ligase LigA [Helicobacter pylori F16] Length = 656 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL ++ HH YY LDDP+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYLNTLS-HH---YYNLDDPIVSDAVYDELYQELKAYEEKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|315586702|gb|ADU41083.1| NAD-dependent DNA ligase LigA [Helicobacter pylori 35A] Length = 656 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL ++ HH YY LDDP+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYLNTLS-HH---YYNLDDPIVSDAVYDELYQELKAYEEKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|15889366|ref|NP_355047.1| NAD-dependent DNA ligase LigA [Agrobacterium tumefaciens str. C58] gi|166215388|sp|A9CIB3|DNLJ_AGRT5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|15157212|gb|AAK87832.1| DNA ligase [Agrobacterium tumefaciens str. C58] Length = 724 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 34/69 (49%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L++ EA E+ +L H Y+ D P +D YD + R DA++ FP L Sbjct: 8 VENLTELEASSELAFLAAELARHDALYHGKDAPEISDADYDALKRRNDAIEAAFPALVRA 67 Query: 111 DHPWNTVGY 119 D P VG+ Sbjct: 68 DSPSKKVGF 76 >gi|148652285|ref|YP_001279378.1| DNA ligase [Psychrobacter sp. PRwf-1] gi|190359276|sp|A5WCN7|DNLJ_PSYWF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|148571369|gb|ABQ93428.1| DNA ligase, NAD-dependent [Psychrobacter sp. PRwf-1] Length = 686 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 33/61 (54%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + ++ L+ H YY +D+P +D YD++ L L+E++PEL D P +V Sbjct: 16 EVIAKMRTLIAQVRKHNNAYYVMDEPTISDNEYDQLRLSLIELEERYPELTQPDSPTASV 75 Query: 118 G 118 G Sbjct: 76 G 76 >gi|160899029|ref|YP_001564611.1| NAD-dependent DNA ligase [Delftia acidovorans SPH-1] gi|254781308|sp|A9BZW4|DNLJ_DELAS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|160364613|gb|ABX36226.1| DNA ligase, NAD-dependent [Delftia acidovorans SPH-1] Length = 703 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 20/41 (48%), Positives = 24/41 (58%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY LD P DG YDRV ++L AL+ +PEL D P V Sbjct: 43 YYVLDTPTVPDGEYDRVFQQLQALEGAYPELVTPDSPTQRV 83 >gi|330433127|gb|AEC18186.1| NAD-dependent DNA ligase LigA [Gallibacterium anatis UMN179] Length = 671 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 31/56 (55%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L +H+ Y+ LD+P+ D YDR+ +L L+ + PEL +D P VG Sbjct: 8 IEQLRNDLRYHEYQYHVLDNPVIPDAEYDRMMNQLKRLEAEHPELITDDSPTQRVG 63 >gi|282899989|ref|ZP_06307949.1| NAD-dependent DNA ligase [Cylindrospermopsis raciborskii CS-505] gi|281195087|gb|EFA70024.1| NAD-dependent DNA ligase [Cylindrospermopsis raciborskii CS-505] Length = 690 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 29/56 (51%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 VE L K+ YY LD P+ D +YDR+ L L++++P L D P VG Sbjct: 14 VEELRKLLQQASYAYYVLDSPIMEDTIYDRLYRELQELEKKYPNLVTTDSPTQRVG 69 >gi|262042032|ref|ZP_06015211.1| DNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040623|gb|EEW41715.1| DNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 671 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ +L L+ Q PEL D P VG Sbjct: 17 HHEYLYHVMDAPEVPDAEYDRLMRKLRELESQHPELITPDSPTQRVG 63 >gi|152971289|ref|YP_001336398.1| NAD-dependent DNA ligase LigA [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166215815|sp|A6TC47|DNLJ_KLEP7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|150956138|gb|ABR78168.1| DNA ligase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 671 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ +L L+ Q PEL D P VG Sbjct: 17 HHEYLYHVMDAPEVPDAEYDRLMRKLRELESQHPELITPDSPTQRVG 63 >gi|311113170|ref|YP_003984392.1| NAD-dependent DNA ligase LigA [Rothia dentocariosa ATCC 17931] gi|310944664|gb|ADP40958.1| NAD-dependent DNA ligase LigA [Rothia dentocariosa ATCC 17931] Length = 740 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 5/80 (6%) Query: 39 RALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 RAL++ LD + ++T + E E+ ++ A H YY+ D P +D YDR+ RL+ Sbjct: 14 RALKA-LDSSAELTDTIRAE-YAELTDTIRTARHD---YYQEDAPTLSDAEYDRLYRRLE 68 Query: 99 ALQEQFPELFDEDHPWNTVG 118 ++ Q+P L D P VG Sbjct: 69 QIEAQYPALIANDSPTQEVG 88 >gi|118590881|ref|ZP_01548281.1| NAD-dependent DNA ligase LigA [Stappia aggregata IAM 12614] gi|118436403|gb|EAV43044.1| NAD-dependent DNA ligase LigA [Stappia aggregata IAM 12614] Length = 750 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 38/68 (55%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + +L++ EA +E++ L H + Y++ D P+ +D YD + R +++ +FP L + Sbjct: 44 IDALTQEEAQVELKRLAAEIAEHDRRYHQEDAPVISDADYDALRRRNASIEARFPNLILD 103 Query: 111 DHPWNTVG 118 D P VG Sbjct: 104 DGPSAQVG 111 >gi|220920535|ref|YP_002495836.1| DNA ligase, NAD-dependent [Methylobacterium nodulans ORS 2060] gi|254781366|sp|B8ICE5|DNLJ_METNO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219945141|gb|ACL55533.1| DNA ligase, NAD-dependent [Methylobacterium nodulans ORS 2060] Length = 829 Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 34/61 (55%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 +A+ V ++ +A E L H + Y+ D P+ +D YD + RL+A++E+FPE Sbjct: 7 RARPVEEMTAAQAREAHESLSAEIAEHDRRYHGEDAPIISDAEYDALRRRLEAIEERFPE 66 Query: 107 L 107 L Sbjct: 67 L 67 >gi|238895883|ref|YP_002920619.1| NAD-dependent DNA ligase LigA [Klebsiella pneumoniae NTUH-K2044] gi|238548201|dbj|BAH64552.1| DNA ligase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 671 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ +L L+ Q PEL D P VG Sbjct: 17 HHEYLYHVMDAPEVPDAEYDRLMRKLRELESQHPELITPDSPTQRVG 63 >gi|330013648|ref|ZP_08307732.1| DNA ligase [Klebsiella sp. MS 92-3] gi|328533421|gb|EGF60158.1| DNA ligase [Klebsiella sp. MS 92-3] Length = 671 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ +L L+ Q PEL D P VG Sbjct: 17 HHEYLYHVMDAPEVPDAEYDRLMRKLRELESQHPELITPDSPTQRVG 63 >gi|1770452|emb|CAA66920.1| ligase-like protein [Homo sapiens] Length = 454 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 31/68 (45%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + LS A EV L + YY D PL D +YD + RL AL+ FP+ + Sbjct: 8 IEQLSTSAAQQEVAQLQADLTEYGVAYYEQDAPLVEDHVYDALYARLVALESAFPQFVTQ 67 Query: 111 DHPWNTVG 118 D P VG Sbjct: 68 DSPTQNVG 75 >gi|260598800|ref|YP_003211371.1| NAD-dependent DNA ligase LigA [Cronobacter turicensis z3032] gi|260217977|emb|CBA32625.1| DNA ligase [Cronobacter turicensis z3032] Length = 672 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L AL+E PEL D P VG Sbjct: 17 HHEFLYHVMDAPEVPDAEYDRLMRELRALEEAHPELVTPDSPTQRVG 63 >gi|119472555|ref|ZP_01614603.1| NAD-dependent DNA ligase [Alteromonadales bacterium TW-7] gi|119444879|gb|EAW26179.1| NAD-dependent DNA ligase [Alteromonadales bacterium TW-7] Length = 672 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 27/57 (47%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +L + H YY LD P D YDR+ L AL+ Q PE D P VG Sbjct: 8 QINHLRTLLEQHNYNYYVLDTPSIPDAEYDRLLRELSALETQNPEFLSADSPTQKVG 64 >gi|330722383|gb|EGH00233.1| DNA ligase [gamma proteobacterium IMCC2047] Length = 258 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 29/57 (50%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EVE L H YY LD+P D YDR+ +L ++ Q PEL +D P VG Sbjct: 9 EVEALRAQLNQHNYRYYVLDEPSIPDVEYDRLLRQLQTIEAQHPELISQDSPTQRVG 65 >gi|217033559|ref|ZP_03438988.1| hypothetical protein HP9810_905g78 [Helicobacter pylori 98-10] gi|216944084|gb|EEC23515.1| hypothetical protein HP9810_905g78 [Helicobacter pylori 98-10] Length = 656 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL ++ HH YY LDDP+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYLNTLS-HH---YYNLDDPIVSDAVYDELYQELKAYEEKNPNGIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|312870519|ref|ZP_07730638.1| DNA ligase (NAD+) [Lactobacillus oris PB013-T2-3] gi|311093981|gb|EFQ52306.1| DNA ligase (NAD+) [Lactobacillus oris PB013-T2-3] Length = 679 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 38/74 (51%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 +DK V L+ A E+ L + + + YY D+P D +YDR +RL L+++F Sbjct: 1 MDKPTPVDQLTLAAAKQEIAPLREQLIKWGQEYYEQDNPSVEDYVYDRAYQRLVELEQRF 60 Query: 105 PELFDEDHPWNTVG 118 PEL D P VG Sbjct: 61 PELKTSDSPTQHVG 74 >gi|77165170|ref|YP_343695.1| DNA ligase (NAD+) [Nitrosococcus oceani ATCC 19707] gi|254433594|ref|ZP_05047102.1| DNA ligase, NAD-dependent [Nitrosococcus oceani AFC27] gi|123730661|sp|Q3JAI1|DNLJ_NITOC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|76883484|gb|ABA58165.1| DNA ligase (NAD+) [Nitrosococcus oceani ATCC 19707] gi|207089927|gb|EDZ67198.1| DNA ligase, NAD-dependent [Nitrosococcus oceani AFC27] Length = 675 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY +++PL D YDR+ L AL+E +PEL D P VG Sbjct: 25 YYVVNNPLVPDSEYDRLIRELQALEENYPELITLDSPTQRVG 66 >gi|254448715|ref|ZP_05062173.1| DNA ligase, NAD-dependent [gamma proteobacterium HTCC5015] gi|198261723|gb|EDY86010.1| DNA ligase, NAD-dependent [gamma proteobacterium HTCC5015] Length = 673 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P D YDR+ L +L+ Q+PE +D P VG Sbjct: 20 QHAHAYYVLDEPSIPDAEYDRLFRELQSLEAQYPESHSDDSPTQRVG 66 >gi|156933031|ref|YP_001436947.1| NAD-dependent DNA ligase LigA [Cronobacter sakazakii ATCC BAA-894] gi|166215403|sp|A7MKW4|DNLJ_ENTS8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|156531285|gb|ABU76111.1| hypothetical protein ESA_00834 [Cronobacter sakazakii ATCC BAA-894] Length = 672 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L AL+E PEL D P VG Sbjct: 17 HHEFLYHVMDAPEVPDAEYDRLMRELRALEEAHPELVTPDSPTQRVG 63 >gi|126462048|ref|YP_001043162.1| DNA ligase, NAD-dependent [Rhodobacter sphaeroides ATCC 17029] gi|166216229|sp|A3PJ74|DNLJ_RHOS1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|126103712|gb|ABN76390.1| DNA ligase, NAD-dependent [Rhodobacter sphaeroides ATCC 17029] Length = 704 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 36/74 (48%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + + V L++ EA E+ L + Y+ D P +D YD + R A++EQF Sbjct: 1 MQDERPVDQLTEAEAATELARLAEAIEAANTAYHTHDAPQISDADYDALKLRNRAIEEQF 60 Query: 105 PELFDEDHPWNTVG 118 PEL D P + VG Sbjct: 61 PELRRSDSPSDRVG 74 >gi|268323600|emb|CBH37188.1| DNA ligase [uncultured archaeon] Length = 667 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 27/47 (57%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY LD+P +D YDR+ L+ L+ ++PEL D P +G Sbjct: 23 YHNYRYYVLDEPEISDAEYDRLFVELEELERKYPELITPDSPTQRIG 69 >gi|71907364|ref|YP_284951.1| NAD-dependent DNA ligase [Dechloromonas aromatica RCB] gi|123746888|sp|Q47FA0|DNLJ_DECAR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|71846985|gb|AAZ46481.1| NAD-dependent DNA ligase [Dechloromonas aromatica RCB] Length = 683 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P D YD++ L L++Q+PEL D P + VG Sbjct: 21 HSYAYYVLDAPTIPDTEYDKLFRELQELEQQYPELLTADSPTHRVG 66 >gi|15827911|ref|NP_302174.1| NAD-dependent DNA ligase LigA [Mycobacterium leprae TN] gi|221230388|ref|YP_002503804.1| NAD-dependent DNA ligase LigA [Mycobacterium leprae Br4923] gi|7674013|sp|O33102|DNLJ_MYCLE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781376|sp|B8ZS27|DNLJ_MYCLB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|2414536|emb|CAB16425.1| DNA ligase [Mycobacterium leprae] gi|13093464|emb|CAC30658.1| DNA ligase [Mycobacterium leprae] gi|219933495|emb|CAR71800.1| DNA ligase [Mycobacterium leprae Br4923] Length = 694 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 26/46 (56%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ +D +D + +RL L+EQ PEL D P VG Sbjct: 27 HQFRYYVRDAPIISDAEFDALLDRLTVLEEQHPELCTPDSPTQLVG 72 >gi|84498237|ref|ZP_00997034.1| DNA ligase [Janibacter sp. HTCC2649] gi|84381737|gb|EAP97620.1| DNA ligase [Janibacter sp. HTCC2649] Length = 731 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 32/53 (60%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + A HQ Y+ D P +DG YD++ +RL+ L++++P L + P +VG Sbjct: 40 LAEQATTHQFAYHVKDSPTVSDGEYDKLMKRLNMLEDEYPSLRTPESPTQSVG 92 >gi|126659779|ref|ZP_01730906.1| NAD-dependent DNA ligase LigA [Cyanothece sp. CCY0110] gi|126618931|gb|EAZ89673.1| NAD-dependent DNA ligase LigA [Cyanothece sp. CCY0110] Length = 677 Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 26/42 (61%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LDDP+ D +YD++ LD L+++ P+L D P VG Sbjct: 26 YYVLDDPIMEDAVYDQLYRELDNLEKEHPQLITPDSPTQRVG 67 >gi|88861394|ref|ZP_01136024.1| NAD-dependent DNA ligase [Pseudoalteromonas tunicata D2] gi|88816660|gb|EAR26485.1| NAD-dependent DNA ligase [Pseudoalteromonas tunicata D2] Length = 673 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 67 VKIALHHQKW-YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +K+ L + YY LD+P D YDRV L AL+ Q+P+ D P VG Sbjct: 12 LKVQLEEYNYQYYVLDNPSVPDSEYDRVMRELIALETQYPQFLSADSPSQKVG 64 >gi|85374270|ref|YP_458332.1| DNA ligase [Erythrobacter litoralis HTCC2594] gi|123409617|sp|Q2N9V6|DNLJ_ERYLH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|84787353|gb|ABC63535.1| DNA ligase [Erythrobacter litoralis HTCC2594] Length = 736 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 35/70 (50%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 ++ +LS+ EA E+ L + H + Y+ D P TD YD + R L+ FP L Sbjct: 4 ELENLSEAEAANELMRLARQIAKHDRLYHAEDAPEITDQEYDALVRRNAELEAAFPHLVR 63 Query: 110 EDHPWNTVGY 119 ED P VG+ Sbjct: 64 EDSPSRKVGH 73 >gi|108803178|ref|YP_643115.1| DNA ligase, NAD-dependent [Rubrobacter xylanophilus DSM 9941] gi|122976160|sp|Q1AZ75|DNLJ_RUBXD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|108764421|gb|ABG03303.1| DNA ligase, NAD-dependent [Rubrobacter xylanophilus DSM 9941] Length = 685 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 31/62 (50%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 EA VE L + +H + YY D P +D YD + L+ L+ +FPEL D P Sbjct: 18 AEARQRVEELREQIRYHNRKYYVEDAPEISDAEYDALYRELEELESRFPELVTPDSPTQR 77 Query: 117 VG 118 VG Sbjct: 78 VG 79 >gi|315223028|ref|ZP_07864907.1| DNA ligase, NAD-dependent [Streptococcus anginosus F0211] gi|315187978|gb|EFU21714.1| DNA ligase, NAD-dependent [Streptococcus anginosus F0211] Length = 652 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 30/53 (56%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LVK+ + YY D+P +D YDR+ L L++Q+PEL D P + VG Sbjct: 8 LVKLLNQYAHEYYTTDNPTVSDSEYDRLYHELLDLEQQYPELVQADSPTHRVG 60 >gi|320160951|ref|YP_004174175.1| DNA ligase [Anaerolinea thermophila UNI-1] gi|319994804|dbj|BAJ63575.1| DNA ligase [Anaerolinea thermophila UNI-1] Length = 674 Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 29/57 (50%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E E L K +H YY LDDP+ +D YDR+ RL ++ PE D P VG Sbjct: 9 EYENLKKQIHYHDYRYYVLDDPVISDAEYDRLILRLKQIEFAHPEWITPDSPSQRVG 65 >gi|326693831|ref|ZP_08230836.1| DNA ligase, NAD-dependent [Leuconostoc argentinum KCTC 3773] Length = 681 Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 31/68 (45%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + LS A EV L + YY D PL D +YD + RL AL+ FP+ + Sbjct: 8 IEQLSTSAAQQEVAQLQADLTEYGVAYYEQDAPLVEDHVYDALYARLVALESAFPQFVTQ 67 Query: 111 DHPWNTVG 118 D P VG Sbjct: 68 DSPTQNVG 75 >gi|291557760|emb|CBL34877.1| DNA ligase, NAD-dependent [Eubacterium siraeum V10Sc8a] Length = 660 Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K + E E L + H YY LDDP D YDR+ R+ ++ + PE+ E P Sbjct: 1 MDKEQIKSEYEQLCREVEQHNFNYYVLDDPTIEDDEYDRLMRRIKEIEAENPEIVSESSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQHVG 65 >gi|255658313|ref|ZP_05403722.1| DNA ligase, NAD-dependent [Mitsuokella multacida DSM 20544] gi|260849632|gb|EEX69639.1| DNA ligase, NAD-dependent [Mitsuokella multacida DSM 20544] Length = 675 Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 32/57 (56%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L K +H YY D+P +D YD++ RL A++ ++PEL ++ P VG Sbjct: 16 ELTELRKTIRYHNNRYYNEDNPEISDYEYDQLMLRLKAIEAKYPELITKNSPTQVVG 72 >gi|162148970|ref|YP_001603431.1| putative DNA ligase [Gluconacetobacter diazotrophicus PAl 5] gi|190359260|sp|A9H0L6|DNLJ_GLUDA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|161787547|emb|CAP57143.1| putative DNA ligase [Gluconacetobacter diazotrophicus PAl 5] Length = 695 Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 35/62 (56%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + L++ +AM+E+E L + + YY D P TD YD + +R A++ +FP+L D Sbjct: 4 SELTEPQAMVELERLAQQIRALDRAYYEDDAPTVTDAEYDALRQRNLAIEARFPDLRRAD 63 Query: 112 HP 113 P Sbjct: 64 SP 65 >gi|315122567|ref|YP_004063056.1| NAD-dependent DNA ligase LigA [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495969|gb|ADR52568.1| NAD-dependent DNA ligase LigA [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 739 Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE---L 107 + LS +A E+ +L +H YY+ P D YD++ ER DA+ FPE L Sbjct: 9 IEELSPEQAKKELSFLQHEISYHDDLYYQHSQPKILDFEYDQLKERCDAIARAFPEFASL 68 Query: 108 FDEDHPWNTVG 118 D + P N +G Sbjct: 69 ADSNGPLNKIG 79 >gi|260426307|ref|ZP_05780286.1| DNA ligase, NAD-dependent [Citreicella sp. SE45] gi|260420799|gb|EEX14050.1| DNA ligase, NAD-dependent [Citreicella sp. SE45] Length = 754 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 38/69 (55%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 +V +L++ +A E+ L ++ + Y+ D P +D YD + R A++E+FPEL Sbjct: 10 EVEALTETQARDELARLAEVLAQANRAYHTEDAPEISDADYDALKLRNIAIEERFPELKR 69 Query: 110 EDHPWNTVG 118 ED P VG Sbjct: 70 EDSPSEQVG 78 >gi|209545276|ref|YP_002277505.1| NAD-dependent DNA ligase [Gluconacetobacter diazotrophicus PAl 5] gi|209532953|gb|ACI52890.1| DNA ligase, NAD-dependent [Gluconacetobacter diazotrophicus PAl 5] Length = 708 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 35/62 (56%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + L++ +AM+E+E L + + YY D P TD YD + +R A++ +FP+L D Sbjct: 17 SELTEPQAMVELERLAQQIRALDRAYYEDDAPTVTDAEYDALRQRNLAIEARFPDLRRAD 76 Query: 112 HP 113 P Sbjct: 77 SP 78 >gi|148658591|ref|YP_001278796.1| DNA ligase [Roseiflexus sp. RS-1] gi|166216236|sp|A5V1U3|DNLJ_ROSS1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|148570701|gb|ABQ92846.1| DNA ligase, NAD-dependent [Roseiflexus sp. RS-1] Length = 726 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 29/56 (51%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 VE L + +H YY LD+P+ +D YD + L AL+ PEL D P VG Sbjct: 10 VEALREQIRYHNYRYYVLDEPVISDAEYDALMRELRALEAAHPELVTPDSPTQRVG 65 >gi|332109529|gb|EGJ10452.1| DNA ligase (NAD+) [Rubrivivax benzoatilyticus JA2] Length = 686 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 26/48 (54%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L +I HH YY LD P D YDR+ + L A++ + P+L D P Sbjct: 13 LRRILSHHAHRYYVLDAPEIPDAEYDRLFQELQAIESEHPDLLTPDSP 60 >gi|149374973|ref|ZP_01892746.1| DNA ligase, NAD-dependent [Marinobacter algicola DG893] gi|149360862|gb|EDM49313.1| DNA ligase, NAD-dependent [Marinobacter algicola DG893] Length = 676 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L I H YY LDDP D YDR+ L L+ Q+P++ D P VG Sbjct: 15 LRDIITEHNYQYYVLDDPRVPDAEYDRLFRELQDLETQYPDIVTPDTPTRRVG 67 >gi|258404928|ref|YP_003197670.1| DNA ligase, NAD-dependent [Desulfohalobium retbaense DSM 5692] gi|257797155|gb|ACV68092.1| DNA ligase, NAD-dependent [Desulfohalobium retbaense DSM 5692] Length = 678 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY LD P +D YD + + L AL+ ++PEL D P VG Sbjct: 19 HHDYLYYVLDAPQISDNEYDALFKELQALEHRYPELDDPASPTKRVG 65 >gi|182677699|ref|YP_001831845.1| DNA ligase, NAD-dependent [Beijerinckia indica subsp. indica ATCC 9039] gi|254781257|sp|B2IGH4|DNLJ_BEII9 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|182633582|gb|ACB94356.1| DNA ligase, NAD-dependent [Beijerinckia indica subsp. indica ATCC 9039] Length = 699 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 34/70 (48%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K + SLS +A E L + H + YY+ D P +D YD + R +AL+ FPEL Sbjct: 5 KPIESLSPAQAKREHRRLGEQITEHDRLYYQEDAPRVSDAEYDALRRRYEALETAFPELV 64 Query: 109 DEDHPWNTVG 118 + +G Sbjct: 65 SAESLTKKIG 74 >gi|159028322|emb|CAO87220.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 669 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 27/42 (64%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LDDP +D +YD++ L+ +++++P+L D P VG Sbjct: 25 YYVLDDPFISDSVYDQLYRELEDIEKRYPQLITPDSPTQRVG 66 >gi|7673996|sp|O87703|DNLJ_BACST RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|3688229|emb|CAA09732.1| DNA ligase [Geobacillus stearothermophilus] Length = 670 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ + L A++EQ+PEL D P +G Sbjct: 24 YYVLDRPSVPDAEYDRLMQELIAIEEQYPELKTSDSPTQRIG 65 >gi|315187042|gb|EFU20799.1| DNA ligase, NAD-dependent [Spirochaeta thermophila DSM 6578] Length = 697 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 34/65 (52%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ EA E++ LV++ YY L P TD YD + ERL L+ +FP L D P Sbjct: 1 MTEQEAKREIDRLVELLQRADYEYYVLGRPHLTDQEYDSLFERLKTLETRFPHLRRPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 IQRVG 65 >gi|295697355|ref|YP_003590593.1| DNA ligase, NAD-dependent [Bacillus tusciae DSM 2912] gi|295412957|gb|ADG07449.1| DNA ligase, NAD-dependent [Bacillus tusciae DSM 2912] Length = 677 Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 30/62 (48%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 +G+A +E L + + YY LDDPL D YDR L L+ + PEL D P Sbjct: 4 QGDAARRIEELRALIRRYDYHYYVLDDPLVDDAEYDRCMRELVELEARHPELVTPDSPTQ 63 Query: 116 TV 117 V Sbjct: 64 RV 65 >gi|260662792|ref|ZP_05863686.1| DNA ligase, NAD-dependent [Lactobacillus fermentum 28-3-CHN] gi|260552873|gb|EEX25872.1| DNA ligase, NAD-dependent [Lactobacillus fermentum 28-3-CHN] Length = 679 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 6/77 (7%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKW---YYRLDDPLFTDGLYDRVSERLDALQ 101 + K + V+ L+K +A E L + +KW YY D+P D +YDR +RL ++ Sbjct: 1 MSKQEAVSELTKQQAQAE---LTPLREQLKKWGAEYYEQDNPSVEDYVYDRAYQRLVEIE 57 Query: 102 EQFPELFDEDHPWNTVG 118 ++FP+L D P VG Sbjct: 58 QRFPDLVVPDSPTQRVG 74 >gi|227515527|ref|ZP_03945576.1| DNA ligase (NAD(+)) [Lactobacillus fermentum ATCC 14931] gi|227086140|gb|EEI21452.1| DNA ligase (NAD(+)) [Lactobacillus fermentum ATCC 14931] Length = 679 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 6/77 (7%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKW---YYRLDDPLFTDGLYDRVSERLDALQ 101 + K + V+ L+K +A E L + +KW YY D+P D +YDR +RL ++ Sbjct: 1 MSKQEAVSELTKQQAQAE---LTPLREQLKKWGAEYYEQDNPSVEDYVYDRAYQRLVEIE 57 Query: 102 EQFPELFDEDHPWNTVG 118 ++FP+L D P VG Sbjct: 58 QRFPDLVVPDSPTQRVG 74 >gi|299783520|gb|ADJ41518.1| DNA ligase, NAD-dependent [Lactobacillus fermentum CECT 5716] Length = 679 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 6/77 (7%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKW---YYRLDDPLFTDGLYDRVSERLDALQ 101 + K + V+ L+K +A E L + +KW YY D+P D +YDR +RL ++ Sbjct: 1 MSKQEAVSELTKQQAQAE---LTPLREQLKKWGAEYYEQDNPSVEDYVYDRAYQRLVEIE 57 Query: 102 EQFPELFDEDHPWNTVG 118 ++FP+L D P VG Sbjct: 58 QRFPDLVVPDSPTQRVG 74 >gi|89900985|ref|YP_523456.1| DNA ligase [Rhodoferax ferrireducens T118] gi|123397178|sp|Q21WC8|DNLJ_RHOFD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|89345722|gb|ABD69925.1| DNA ligase, NAD-dependent [Rhodoferax ferrireducens T118] Length = 690 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 70 ALH-HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ALH H YY D P D YDR+ + L A++ Q PEL D P VG Sbjct: 25 ALHEHAHHYYVEDAPTIPDAEYDRMFQELQAIEAQHPELITPDSPTQRVG 74 >gi|255102476|ref|ZP_05331453.1| DNA ligase [Clostridium difficile QCD-63q42] Length = 674 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 33/57 (57%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L++ +H + YY D P +D YD++ + L +L+E+ PEL D P N VG Sbjct: 6 EINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSPTNRVG 62 >gi|327394702|dbj|BAK12124.1| DNA ligase LigA [Pantoea ananatis AJ13355] Length = 672 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+EQ P+L D P VG Sbjct: 17 HHEYLYHVMDAPEVPDAEYDRLMRELRELEEQHPDLITPDSPTQRVG 63 >gi|291618312|ref|YP_003521054.1| LigA [Pantoea ananatis LMG 20103] gi|291153342|gb|ADD77926.1| LigA [Pantoea ananatis LMG 20103] Length = 672 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+EQ P+L D P VG Sbjct: 17 HHEYLYHVMDAPEVPDAEYDRLMRELRELEEQHPDLITPDSPTQRVG 63 >gi|255657267|ref|ZP_05402676.1| DNA ligase [Clostridium difficile QCD-23m63] Length = 674 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 33/57 (57%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L++ +H + YY D P +D YD++ + L +L+E+ PEL D P N VG Sbjct: 6 EINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSPTNRVG 62 >gi|184155951|ref|YP_001844291.1| NAD-dependent DNA ligase [Lactobacillus fermentum IFO 3956] gi|254781353|sp|B2GDS9|DNLJ_LACF3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|183227295|dbj|BAG27811.1| NAD-dependent DNA ligase [Lactobacillus fermentum IFO 3956] Length = 679 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 6/77 (7%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKW---YYRLDDPLFTDGLYDRVSERLDALQ 101 + K + V+ L+K +A E L + +KW YY D+P D +YDR +RL ++ Sbjct: 1 MSKQEAVSELTKQQAQAE---LTPLREQLKKWGAEYYEQDNPSVEDYVYDRAYQRLVEIE 57 Query: 102 EQFPELFDEDHPWNTVG 118 ++FP+L D P VG Sbjct: 58 QRFPDLVVPDSPTQRVG 74 >gi|329848744|ref|ZP_08263772.1| DNA ligase, NAD-dependent [Asticcacaulis biprosthecum C19] gi|328843807|gb|EGF93376.1| DNA ligase, NAD-dependent [Asticcacaulis biprosthecum C19] Length = 714 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 28/47 (59%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H+ YYR + P TD YD + ++L L+ QFP+L + P TVG Sbjct: 19 YHRGLYYREETPELTDADYDALEKQLRDLEAQFPDLKTSESPTQTVG 65 >gi|282896837|ref|ZP_06304843.1| NAD-dependent DNA ligase [Raphidiopsis brookii D9] gi|281198246|gb|EFA73136.1| NAD-dependent DNA ligase [Raphidiopsis brookii D9] Length = 692 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 29/56 (51%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 VE L K+ YY LD P+ D +YDR+ L L++++P L D P VG Sbjct: 14 VEELRKLLQQAGYAYYVLDSPIMEDTIYDRLYRELQELEKKYPNLVTSDSPTQRVG 69 >gi|239906999|ref|YP_002953740.1| NAD-dependent DNA ligase [Desulfovibrio magneticus RS-1] gi|239796865|dbj|BAH75854.1| NAD-dependent DNA ligase [Desulfovibrio magneticus RS-1] Length = 704 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 20/42 (47%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LDDP D YD + L AL+E PEL D + P VG Sbjct: 27 YYVLDDPTVEDAAYDALYRELKALEEAHPELADPNSPTRRVG 68 >gi|238756322|ref|ZP_04617636.1| DNA ligase [Yersinia ruckeri ATCC 29473] gi|238705475|gb|EEP97878.1| DNA ligase [Yersinia ruckeri ATCC 29473] Length = 674 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ L L+ Q PEL D P VG Sbjct: 17 HHEHQYHVLDAPEIPDAEYDRLMGELRELEAQHPELITADSPTQRVG 63 >gi|254976908|ref|ZP_05273380.1| DNA ligase [Clostridium difficile QCD-66c26] gi|255308381|ref|ZP_05352552.1| DNA ligase [Clostridium difficile ATCC 43255] gi|255316048|ref|ZP_05357631.1| DNA ligase [Clostridium difficile QCD-76w55] gi|255518705|ref|ZP_05386381.1| DNA ligase [Clostridium difficile QCD-97b34] gi|255651827|ref|ZP_05398729.1| DNA ligase [Clostridium difficile QCD-37x79] gi|306521614|ref|ZP_07407961.1| DNA ligase [Clostridium difficile QCD-32g58] Length = 674 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 33/57 (57%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L++ +H + YY D P +D YD++ + L +L+E+ PEL D P N VG Sbjct: 6 EINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSPTNRVG 62 >gi|328887795|emb|CAJ70206.2| DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) [Clostridium difficile] Length = 674 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 33/57 (57%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L++ +H + YY D P +D YD++ + L +L+E+ PEL D P N VG Sbjct: 6 EINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSPTNRVG 62 >gi|260684853|ref|YP_003216138.1| DNA ligase [Clostridium difficile CD196] gi|260688511|ref|YP_003219645.1| DNA ligase [Clostridium difficile R20291] gi|260211016|emb|CBA66332.1| DNA ligase [Clostridium difficile CD196] gi|260214528|emb|CBE07046.1| DNA ligase [Clostridium difficile R20291] Length = 677 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 33/57 (57%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L++ +H + YY D P +D YD++ + L +L+E+ PEL D P N VG Sbjct: 9 EINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSPTNRVG 65 >gi|296451892|ref|ZP_06893609.1| NAD-dependent DNA ligase LigA [Clostridium difficile NAP08] gi|296879713|ref|ZP_06903688.1| NAD-dependent DNA ligase LigA [Clostridium difficile NAP07] gi|296259274|gb|EFH06152.1| NAD-dependent DNA ligase LigA [Clostridium difficile NAP08] gi|296429302|gb|EFH15174.1| NAD-dependent DNA ligase LigA [Clostridium difficile NAP07] Length = 677 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 33/57 (57%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L++ +H + YY D P +D YD++ + L +L+E+ PEL D P N VG Sbjct: 9 EINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSPTNRVG 65 >gi|119476275|ref|ZP_01616626.1| DNA ligase [marine gamma proteobacterium HTCC2143] gi|119450139|gb|EAW31374.1| DNA ligase [marine gamma proteobacterium HTCC2143] Length = 781 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 +T +S + IE E + LH+ + Y+ LD+P D YDR+ +L L+ +FP+ Sbjct: 1 MTEISDPKQQIE-ELRSTVNLHNYR-YHALDEPTVPDAEYDRLIRQLQVLEAKFPQFITN 58 Query: 111 DHPWNTVG 118 D P VG Sbjct: 59 DSPTQRVG 66 >gi|207109554|ref|ZP_03243716.1| NAD-dependent DNA ligase LigA [Helicobacter pylori HPKX_438_CA4C1] Length = 87 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 8/60 (13%) Query: 64 EYLVKIAL-----HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL +IA HH YY LDDP+ +D +YD + + L A +E+ P + P VG Sbjct: 7 EYLERIAYLNTLSHH---YYNLDDPIVSDAVYDELYQELKAYEEKNPNSIQANSPTQKVG 63 >gi|71042246|pdb|1ZAU|A Chain A, Adenylation Domain Of Nad+ Dependent Dna Ligase From M.Tuberculosis Length = 328 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 21/46 (45%), Positives = 27/46 (58%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ +D +D + RL+AL+EQ PEL D P VG Sbjct: 27 HQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVG 72 >gi|169350953|ref|ZP_02867891.1| hypothetical protein CLOSPI_01730 [Clostridium spiroforme DSM 1552] gi|169292015|gb|EDS74148.1| hypothetical protein CLOSPI_01730 [Clostridium spiroforme DSM 1552] Length = 682 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 27/48 (56%) Query: 71 LHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++H YY DDP +D YD + + L AL+++ PE ED P VG Sbjct: 33 MYHNDRYYNQDDPEISDYEYDMMMQELKALEKKHPEYITEDSPTQKVG 80 >gi|217032016|ref|ZP_03437517.1| hypothetical protein HPB128_187g43 [Helicobacter pylori B128] gi|216946326|gb|EEC24932.1| hypothetical protein HPB128_187g43 [Helicobacter pylori B128] Length = 458 Score = 42.7 bits (99), Expect = 0.014, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 8/60 (13%) Query: 64 EYLVKIAL-----HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL +IA HH YY LDDP+ +D +YD + + L A +E+ P + P VG Sbjct: 7 EYLERIAYLNTLSHH---YYNLDDPIVSDAVYDELYQELKAYEEKNPNSIQANSPTQKVG 63 >gi|126700928|ref|YP_001089825.1| DNA ligase [Clostridium difficile 630] gi|123362868|sp|Q180F3|DNLJ_CLOD6 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 677 Score = 42.7 bits (99), Expect = 0.014, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 33/57 (57%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L++ +H + YY D P +D YD++ + L +L+E+ PEL D P N VG Sbjct: 9 EINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSPTNRVG 65 >gi|150397271|ref|YP_001327738.1| NAD-dependent DNA ligase LigA [Sinorhizobium medicae WSM419] gi|166216245|sp|A6UB73|DNLJ_SINMW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|150028786|gb|ABR60903.1| DNA ligase, NAD-dependent [Sinorhizobium medicae WSM419] Length = 717 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ DDP +D YD + R D ++E+FP L ED P VG Sbjct: 30 HDMLYHGKDDPEISDADYDALKRRNDLIEERFPALIREDSPSQKVG 75 >gi|83953544|ref|ZP_00962265.1| DNA ligase, NAD-dependent [Sulfitobacter sp. NAS-14.1] gi|83841489|gb|EAP80658.1| DNA ligase, NAD-dependent [Sulfitobacter sp. NAS-14.1] Length = 706 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 LS+ EA E+ L + Y+ D P +D YDR+ R A++E+FP L D P Sbjct: 10 LSEEEAKAELARLADLLGRANAAYHTQDAPDLSDAEYDRLKRRNQAIEERFPRLKRADSP 69 Query: 114 WNTVG 118 + VG Sbjct: 70 SDKVG 74 >gi|307546309|ref|YP_003898788.1| DNA ligase, NAD-dependent [Halomonas elongata DSM 2581] gi|307218333|emb|CBV43603.1| DNA ligase, NAD-dependent [Halomonas elongata DSM 2581] Length = 700 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+P TD YDR RL ++ ++PEL D P VG Sbjct: 44 YYVLDEPRMTDADYDRKLRRLQEIETEYPELVRPDSPTQRVG 85 >gi|261418603|ref|YP_003252285.1| NAD-dependent DNA ligase LigA [Geobacillus sp. Y412MC61] gi|319765418|ref|YP_004130919.1| DNA ligase, NAD-dependent [Geobacillus sp. Y412MC52] gi|261375060|gb|ACX77803.1| DNA ligase, NAD-dependent [Geobacillus sp. Y412MC61] gi|317110284|gb|ADU92776.1| DNA ligase, NAD-dependent [Geobacillus sp. Y412MC52] Length = 670 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ + L A++EQ+PEL D P +G Sbjct: 24 YYVLDRPSVPDAEYDRLMQELMAIEEQYPELKTSDSPTQRIG 65 >gi|56418811|ref|YP_146129.1| NAD-dependent DNA ligase LigA [Geobacillus kaustophilus HTA426] gi|81348272|sp|Q5L3B9|DNLJ_GEOKA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|56378653|dbj|BAD74561.1| DNA ligase (polydeoxyribonucleotide synthase[NAD+]) [Geobacillus kaustophilus HTA426] Length = 670 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ + L A++EQ+PEL D P +G Sbjct: 24 YYVLDRPSVPDAEYDRLMQELMAIEEQYPELKTSDSPTQRIG 65 >gi|310657889|ref|YP_003935610.1| DNA ligase [Clostridium sticklandii DSM 519] gi|308824667|emb|CBH20705.1| DNA ligase, NAD(+)-dependent [Clostridium sticklandii] Length = 683 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY D P +D +D + + L AL+E++PE ED P +G Sbjct: 23 HHSILYYVQDSPEISDADFDMLMKELIALEEKYPEYITEDSPTQRIG 69 >gi|329115587|ref|ZP_08244309.1| DNA ligase [Acetobacter pomorum DM001] gi|326695015|gb|EGE46734.1| DNA ligase [Acetobacter pomorum DM001] Length = 710 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +++ +A E+E+L HH YYR D P +D YD + R DA+ Q P+ E+ Sbjct: 25 TMTLQQAREELEHLAAEIAHHNAAYYRNDAPEISDAEYDALRRRYDAIVAQHPQAEPENS 84 Query: 113 PWNTVG 118 VG Sbjct: 85 AAQAVG 90 >gi|297528690|ref|YP_003669965.1| DNA ligase, NAD-dependent [Geobacillus sp. C56-T3] gi|297251942|gb|ADI25388.1| DNA ligase, NAD-dependent [Geobacillus sp. C56-T3] Length = 670 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ + L A++EQ+PEL D P +G Sbjct: 24 YYVLDRPSVPDAEYDRLMQELIAIEEQYPELKTSDSPTQRIG 65 >gi|157363572|ref|YP_001470339.1| DNA ligase, NAD-dependent [Thermotoga lettingae TMO] gi|190359296|sp|A8F541|DNLJ_THELT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157314176|gb|ABV33275.1| DNA ligase, NAD-dependent [Thermotoga lettingae TMO] Length = 678 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 28/47 (59%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY L DP+ +D YDR+ + L L++++PEL D P VG Sbjct: 20 YHNYRYYVLADPIISDEEYDRLMQELIELEKKYPELVTPDSPSQRVG 66 >gi|94971682|ref|YP_593730.1| DNA ligase, NAD-dependent [Candidatus Koribacter versatilis Ellin345] gi|122986011|sp|Q1IHJ4|DNLJ_ACIBL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|94553732|gb|ABF43656.1| DNA ligase, NAD-dependent [Candidatus Koribacter versatilis Ellin345] Length = 673 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H+ YY LDDP +D YD + L AL+ + PEL D P VG Sbjct: 20 YHEHRYYVLDDPEISDADYDVMMNELKALEAKHPELLTPDSPTQRVG 66 >gi|5733399|gb|AAD49562.1|AF126866_1 NAD-dependent DNA ligase [Pseudoalteromonas haloplanktis] Length = 672 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 27/57 (47%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +V +L I H YY LD P D YDR+ L AL+ + PE D P VG Sbjct: 8 QVNHLRIILEQHNYNYYVLDTPSIPDSEYDRLLRELSALETEHPEFLTADSPTQKVG 64 >gi|121604718|ref|YP_982047.1| DNA ligase [Polaromonas naphthalenivorans CJ2] gi|166216226|sp|A1VN98|DNLJ_POLNA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|120593687|gb|ABM37126.1| DNA ligase, NAD-dependent [Polaromonas naphthalenivorans CJ2] Length = 707 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P D YDR+ + L AL+ PEL D P VG Sbjct: 34 HAHRYYVLDEPSIPDAEYDRLFKELQALEAAHPELLTPDSPTQRVG 79 >gi|220935192|ref|YP_002514091.1| DNA ligase (NAD(+)) [Thioalkalivibrio sp. HL-EbGR7] gi|254781444|sp|B8GTL0|DNLJ_THISH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219996502|gb|ACL73104.1| DNA ligase (NAD(+)) [Thioalkalivibrio sp. HL-EbGR7] Length = 675 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY LDDP D YD + L L+ ++PEL D P VG Sbjct: 21 YHNHRYYVLDDPEIPDAAYDALMRELQDLEAKYPELVTPDSPTQRVG 67 >gi|326381521|ref|ZP_08203215.1| NAD-dependent DNA ligase LigA [Gordonia neofelifaecis NRRL B-59395] gi|326199768|gb|EGD56948.1| NAD-dependent DNA ligase LigA [Gordonia neofelifaecis NRRL B-59395] Length = 692 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 27/46 (58%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ +DG +D + RL AL+++ PEL D P VG Sbjct: 25 HQFRYYVQDAPVISDGEFDTLLRRLQALEDEHPELAVADSPTKLVG 70 >gi|300779557|ref|ZP_07089415.1| NAD-dependent DNA ligase LigA [Chryseobacterium gleum ATCC 35910] gi|300505067|gb|EFK36207.1| NAD-dependent DNA ligase LigA [Chryseobacterium gleum ATCC 35910] Length = 667 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 32/56 (57%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L K H + YY+LD P TD +D + + L L+ ++PE +DE+ P VG Sbjct: 9 IEQLRKELHQHNENYYQLDTPTITDFEFDMLLQELQDLEARYPEFYDENSPTVRVG 64 >gi|241896133|ref|ZP_04783429.1| NAD-dependent DNA ligase [Weissella paramesenteroides ATCC 33313] gi|241870647|gb|EER74398.1| NAD-dependent DNA ligase [Weissella paramesenteroides ATCC 33313] Length = 675 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 68 KIALHHQKW---YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 K+ L Q+W YY D P D YD+V +RL L+ FPEL + D VG Sbjct: 18 KLQLQLQQWAKEYYENDSPTVEDAEYDKVYKRLQELEAAFPELVNPDSITQQVG 71 >gi|148243508|ref|YP_001228665.1| NAD-dependent DNA ligase LigA [Synechococcus sp. RCC307] gi|166216253|sp|A5GWQ3|DNLJ_SYNR3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|147851818|emb|CAK29312.1| NAD-dependent DNA ligase [Synechococcus sp. RCC307] Length = 675 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L+ A H YY LD P F D +YDR+ L L++Q P+L D P VG Sbjct: 13 ELRQLLNRAAHA---YYVLDAPEFEDAVYDRLYRELLDLEQQHPDLLSADSPTQRVG 66 >gi|91788454|ref|YP_549406.1| DNA ligase [Polaromonas sp. JS666] gi|123164833|sp|Q12AD4|DNLJ_POLSJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|91697679|gb|ABE44508.1| DNA ligase, NAD-dependent [Polaromonas sp. JS666] Length = 706 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 67 VKIALH-HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LH H YY LD+P D YDR+ + L L+ +PEL D P VG Sbjct: 26 LRAELHAHAHRYYVLDEPTIPDSEYDRLFKELQDLEAAYPELLTPDSPTQRVG 78 >gi|295107089|emb|CBL04632.1| DNA ligase, NAD-dependent [Gordonibacter pamelaeae 7-10-1-b] Length = 731 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 13/89 (14%) Query: 31 EAKFLPNKRAL-ESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGL 89 E + L ++RAL E+ D A ++ +L + E+E HH YY D P +DG Sbjct: 27 EQQNLLDERALAEATSDPAARIEALRR-----EIE-------HHTYLYYAQDAPEISDGA 74 Query: 90 YDRVSERLDALQEQFPELFDEDHPWNTVG 118 +D + L L+ PEL D P VG Sbjct: 75 FDSLMRELRELEAAHPELVDPSSPTQRVG 103 >gi|207092489|ref|ZP_03240276.1| NAD-dependent DNA ligase LigA [Helicobacter pylori HPKX_438_AG0C1] Length = 656 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 8/60 (13%) Query: 64 EYLVKIAL-----HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL +IA HH YY LDDP+ +D +YD + + L A +E+ P + P VG Sbjct: 7 EYLERIAYLNTLSHH---YYNLDDPIVSDAVYDELYQELKAYEEKNPNSIQANSPTQKVG 63 >gi|161502427|ref|YP_001569539.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|190359281|sp|A9MIG0|DNLJ_SALAR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|160863774|gb|ABX20397.1| hypothetical protein SARI_00461 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 671 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L AL+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRALEAQRPDLITPDSPTQRVG 63 >gi|297571016|ref|YP_003696790.1| DNA ligase, NAD-dependent [Arcanobacterium haemolyticum DSM 20595] gi|296931363|gb|ADH92171.1| DNA ligase, NAD-dependent [Arcanobacterium haemolyticum DSM 20595] Length = 843 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A + + L L Q+ YY D + D YD + L AL+E+FP+L+ D P V Sbjct: 11 DAQVRWQELAPQLLDAQETYYSTGDQVMVDATYDALMRELRALEEEFPQLWSPDSPSTKV 70 Query: 118 G 118 G Sbjct: 71 G 71 >gi|94499335|ref|ZP_01305873.1| DNA ligase, NAD-dependent [Oceanobacter sp. RED65] gi|94428967|gb|EAT13939.1| DNA ligase, NAD-dependent [Oceanobacter sp. RED65] Length = 694 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LDDP D YDR+ L L+ + PEL +D P VG Sbjct: 40 YYVLDDPSIPDAEYDRLFHELKGLESKHPELLTKDSPTQRVG 81 >gi|308450080|ref|XP_003088175.1| hypothetical protein CRE_02776 [Caenorhabditis remanei] gi|308249279|gb|EFO93231.1| hypothetical protein CRE_02776 [Caenorhabditis remanei] Length = 1202 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A +E E L ++ YY L +D YD + RL+AL+ FPEL +D P VG Sbjct: 179 ARVEAEQLTAEIERYRAAYYSEATSLVSDAQYDELFHRLEALERAFPELAGQDSPTQEVG 238 >gi|300311482|ref|YP_003775574.1| NAD-dependent DNA ligase [Herbaspirillum seropedicae SmR1] gi|300074267|gb|ADJ63666.1| NAD-dependent DNA ligase (contains BRCT domain type II) protein [Herbaspirillum seropedicae SmR1] Length = 688 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P D YDR+ + L AL+ PEL D P VG Sbjct: 32 HNYSYYVLDQPSIPDAEYDRLFQELQALETAHPELLTPDSPTQRVG 77 >gi|219870289|ref|YP_002474664.1| NAD-dependent DNA ligase LigA [Haemophilus parasuis SH0165] gi|254781340|sp|B8F314|DNLJ_HAEPS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219690493|gb|ACL31716.1| NAD-dependent DNA ligase LigA [Haemophilus parasuis SH0165] Length = 675 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 31/57 (54%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E+L + ++ Y+ LD+PL D YDR+ L L+ Q PEL D P VG Sbjct: 8 QLEHLREKLREYEYHYHVLDNPLVPDAEYDRLMNELKNLEWQHPELITSDSPTQRVG 64 >gi|58426627|gb|AAW75664.1| DNA ligase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 961 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 5/82 (6%) Query: 39 RALESWLDKAKKVTSLSKG--EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSER 96 RA+E + + V ++ +G E E+ ++ A H YY L DP TD YD++ Sbjct: 106 RAIELKILSGQLVETMEQGVIERARELRRRIENADHR---YYDLADPEITDAQYDQLFRE 162 Query: 97 LDALQEQFPELFDEDHPWNTVG 118 L L++++PEL D P VG Sbjct: 163 LQELEQKYPELVTADSPSMRVG 184 >gi|126668324|ref|ZP_01739283.1| DNA ligase, NAD-dependent [Marinobacter sp. ELB17] gi|126627241|gb|EAZ97879.1| DNA ligase, NAD-dependent [Marinobacter sp. ELB17] Length = 703 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LDDP D YDR+ L AL+ ++PEL P VG Sbjct: 22 HNHHYYVLDDPQVPDAEYDRLFRGLQALEAEYPELATATSPTQRVG 67 >gi|294011619|ref|YP_003545079.1| NAD-dependent DNA ligase [Sphingobium japonicum UT26S] gi|292674949|dbj|BAI96467.1| NAD-dependent DNA ligase [Sphingobium japonicum UT26S] Length = 711 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 33/68 (48%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 +TS+++ EA + L + H + Y+ D P TD YD + +AL+ FP L Sbjct: 4 LTSMTEAEAANHLMRLAREIARHNRLYHDQDQPEITDAAYDALIRENNALEAAFPHLVRS 63 Query: 111 DHPWNTVG 118 D P VG Sbjct: 64 DSPNAQVG 71 >gi|240948595|ref|ZP_04752968.1| NAD-dependent DNA ligase LigA [Actinobacillus minor NM305] gi|240297103|gb|EER47674.1| NAD-dependent DNA ligase LigA [Actinobacillus minor NM305] Length = 679 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 31/60 (51%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ E+E L ++ Y+ LD+PL D YDR+ L L+ Q PEL D P VG Sbjct: 12 SLSEIETLRNKLREYEYHYHVLDNPLVPDAEYDRLMNELKNLEWQHPELITPDSPTQRVG 71 >gi|320102706|ref|YP_004178297.1| NAD-dependent DNA ligase [Isosphaera pallida ATCC 43644] gi|319749988|gb|ADV61748.1| DNA ligase, NAD-dependent [Isosphaera pallida ATCC 43644] Length = 896 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 31/56 (55%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L + HH + YY P+ +D YDR+ + L+AL+ + P+L D P VG Sbjct: 18 IERLRREIEHHNRLYYVEAAPVISDAEYDRLVKDLEALEAERPDLVTPDSPTQRVG 73 >gi|217979603|ref|YP_002363750.1| DNA ligase, NAD-dependent [Methylocella silvestris BL2] gi|254781370|sp|B8ETN6|DNLJ_METSB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|217504979|gb|ACK52388.1| DNA ligase, NAD-dependent [Methylocella silvestris BL2] Length = 700 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 48 AKKVTSLSKGEAMIEVEYL-VKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 AK + +++ +A E L +IA H + YYR D P +D YDR+ R L+ FPE Sbjct: 3 AKPIDAMTLAQARREHSRLGAEIAAHDAR-YYREDAPTVSDAEYDRLRRRYGELESAFPE 61 Query: 107 LFDEDHPWNTVG 118 L D VG Sbjct: 62 LASPDSLTKKVG 73 >gi|254468809|ref|ZP_05082215.1| DNA ligase, NAD-dependent [beta proteobacterium KB13] gi|207087619|gb|EDZ64902.1| DNA ligase, NAD-dependent [beta proteobacterium KB13] Length = 669 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 28/57 (49%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ YL + H YY LDDP +D YD + L +++ PEL D P VG Sbjct: 8 KISYLKSVIQEHDHCYYVLDDPQISDHEYDSLLRELKNIEDSNPELITPDSPTQRVG 64 >gi|298736308|ref|YP_003728834.1| NAD-dependent DNA ligase LigA [Helicobacter pylori B8] gi|298355498|emb|CBI66370.1| NAD-dependent DNA ligase LigA [Helicobacter pylori B8] Length = 656 Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 8/60 (13%) Query: 64 EYLVKIAL-----HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL +IA HH YY LDDP+ +D +YD + + L A +E+ P + P VG Sbjct: 7 EYLERIAYLNTLSHH---YYNLDDPIVSDAVYDELYQELKAYEEKNPNSIQANSPTQKVG 63 >gi|290508381|ref|ZP_06547752.1| DNA ligase, NAD-dependent [Klebsiella sp. 1_1_55] gi|289777775|gb|EFD85772.1| DNA ligase, NAD-dependent [Klebsiella sp. 1_1_55] Length = 671 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q PEL D P VG Sbjct: 17 HHEYLYHVMDAPEVPDAEYDRLMRELRELESQHPELITPDSPTQRVG 63 >gi|218281363|ref|ZP_03487841.1| hypothetical protein EUBIFOR_00406 [Eubacterium biforme DSM 3989] gi|218217455|gb|EEC90993.1| hypothetical protein EUBIFOR_00406 [Eubacterium biforme DSM 3989] Length = 667 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 17/37 (45%), Positives = 25/37 (67%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 YY D+P TD YDR+ + L AL+E++PE++D P Sbjct: 24 YYVYDNPSITDQEYDRLMQELMALEEKYPEMYDATSP 60 >gi|206579402|ref|YP_002237241.1| DNA ligase, NAD-dependent [Klebsiella pneumoniae 342] gi|288934177|ref|YP_003438236.1| DNA ligase, NAD-dependent [Klebsiella variicola At-22] gi|254781350|sp|B5XVT4|DNLJ_KLEP3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|206568460|gb|ACI10236.1| DNA ligase, NAD-dependent [Klebsiella pneumoniae 342] gi|288888906|gb|ADC57224.1| DNA ligase, NAD-dependent [Klebsiella variicola At-22] Length = 671 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q PEL D P VG Sbjct: 17 HHEYLYHVMDAPEVPDAEYDRLMRELRELESQHPELITPDSPTQRVG 63 >gi|225181787|ref|ZP_03735225.1| DNA ligase, NAD-dependent [Dethiobacter alkaliphilus AHT 1] gi|225167561|gb|EEG76374.1| DNA ligase, NAD-dependent [Dethiobacter alkaliphilus AHT 1] Length = 667 Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 37/65 (56%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A+ VE L + H Y+ LD+P +D +D + ++L+A++ QFP+L D P Sbjct: 1 MDRQQALETVEKLRQEIDDHNYRYHVLDEPQISDAEFDDLMQKLEAMEAQFPDLVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|167855687|ref|ZP_02478444.1| NAD-dependent DNA ligase LigA [Haemophilus parasuis 29755] gi|167853205|gb|EDS24462.1| NAD-dependent DNA ligase LigA [Haemophilus parasuis 29755] Length = 675 Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 31/57 (54%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E+L + ++ Y+ LD+PL D YDR+ L L+ Q PEL D P VG Sbjct: 8 QLEHLREKLREYEYHYHVLDNPLVPDAEYDRLMNELKNLEWQHPELITSDSPTQRVG 64 >gi|57234606|ref|YP_181338.1| DNA ligase, NAD-dependent [Dehalococcoides ethenogenes 195] gi|123759715|sp|Q3Z8W1|DNLJ_DEHE1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|57225054|gb|AAW40111.1| DNA ligase, NAD-dependent [Dehalococcoides ethenogenes 195] Length = 677 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 29/57 (50%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+E L + H + YY D+P +D YD + RL L+E PEL D P VG Sbjct: 7 EIENLRREINRHNQLYYVQDNPEISDSEYDALLRRLKELEEAHPELVTADSPTQRVG 63 >gi|283786048|ref|YP_003365913.1| DNA ligase [Citrobacter rodentium ICC168] gi|282949502|emb|CBG89116.1| DNA ligase [Citrobacter rodentium ICC168] Length = 671 Score = 42.4 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q PEL D P VG Sbjct: 17 HHEYLYHVMDAPEVPDAEYDRLMRELRELEAQHPELITPDSPTQRVG 63 >gi|261340751|ref|ZP_05968609.1| DNA ligase, NAD-dependent [Enterobacter cancerogenus ATCC 35316] gi|288317173|gb|EFC56111.1| DNA ligase, NAD-dependent [Enterobacter cancerogenus ATCC 35316] Length = 671 Score = 42.4 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q PEL D P VG Sbjct: 17 HHEYLYHVMDAPEVPDAEYDRLMRELRELEAQHPELITPDSPTQRVG 63 >gi|108563021|ref|YP_627337.1| NAD-dependent DNA ligase LigA [Helicobacter pylori HPAG1] gi|123246990|sp|Q1CTQ9|DNLJ_HELPH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|107836794|gb|ABF84663.1| DNA ligase [Helicobacter pylori HPAG1] Length = 656 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 8/60 (13%) Query: 64 EYLVKIAL-----HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL +IA HH YY LDDP+ +D +YD + + L A +E+ P + P VG Sbjct: 7 EYLERIAYLNTLSHH---YYNLDDPIVSDAVYDELYQELKAYEEKNPSHIQANSPTQKVG 63 >gi|159897339|ref|YP_001543586.1| DNA ligase, NAD-dependent [Herpetosiphon aurantiacus ATCC 23779] gi|254781348|sp|A9AXP4|DNLJ_HERA2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|159890378|gb|ABX03458.1| DNA ligase, NAD-dependent [Herpetosiphon aurantiacus ATCC 23779] Length = 673 Score = 42.4 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY LD PL +D YD + L A++ ++PEL D P VG Sbjct: 23 HH---YYTLDAPLVSDAQYDSLLNELRAIEAEYPELRTPDSPTQRVG 66 >gi|227535466|ref|ZP_03965515.1| DNA ligase (polydeoxyribonucleotide synthase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227186876|gb|EEI66943.1| DNA ligase (polydeoxyribonucleotide synthase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 674 Score = 42.4 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 32/71 (45%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 AK + EA EVE L K + YY D P TD +YD L AL+ +P+L Sbjct: 3 AKPAAQFTLEEAQAEVEKLRKQLNQWRLEYYTKDAPTVTDNVYDDHYRDLQALEAAYPKL 62 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 63 VTPDSPTQEVG 73 >gi|320105506|ref|YP_004181096.1| NAD-dependent DNA ligase [Terriglobus saanensis SP1PR4] gi|319924027|gb|ADV81102.1| DNA ligase, NAD-dependent [Terriglobus saanensis SP1PR4] Length = 694 Score = 42.4 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ YY LD P +D YD + L AL+ + PEL + P VG Sbjct: 16 HHEHAYYVLDKPEISDAQYDALVNLLKALETEHPELVTPESPTQRVG 62 >gi|317121135|ref|YP_004101138.1| DNA ligase, NAD-dependent [Thermaerobacter marianensis DSM 12885] gi|315591115|gb|ADU50411.1| DNA ligase, NAD-dependent [Thermaerobacter marianensis DSM 12885] Length = 764 Score = 42.4 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY LD P D YD + L L+ +FPE+ D P VG Sbjct: 37 HHDYLYYVLDRPEIDDAAYDALMRELRELEARFPEIVTPDSPTQRVG 83 >gi|111225216|ref|YP_716010.1| DNA ligase [Frankia alni ACN14a] gi|122953782|sp|Q0RDH8|DNLJ_FRAAA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|111152748|emb|CAJ64491.1| DNA ligase [Frankia alni ACN14a] Length = 771 Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P +D YDR+ L AL+E PEL D P V Sbjct: 73 HAYRYYVLDSPTVSDAEYDRLMRELTALEEHHPELRTPDSPTQKVA 118 >gi|223041748|ref|ZP_03611941.1| DNA ligase [Actinobacillus minor 202] gi|223017432|gb|EEF15850.1| DNA ligase [Actinobacillus minor 202] Length = 680 Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 29/57 (50%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+E L ++ Y+ LD+PL D YDR+ L L+ Q PEL D P VG Sbjct: 15 EIETLRNKLREYEYHYHVLDNPLVPDAEYDRLMNELKNLEWQHPELITPDSPTQRVG 71 >gi|323140467|ref|ZP_08075395.1| DNA ligase (NAD+) [Phascolarctobacterium sp. YIT 12067] gi|322415035|gb|EFY05826.1| DNA ligase (NAD+) [Phascolarctobacterium sp. YIT 12067] Length = 679 Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + E + L + H++ YY LD P TD YDR+ RL L+ ++P+ D P VG Sbjct: 15 LAEADKLRREIRHNEYLYYVLDAPEITDAEYDRMMVRLRELEARYPDSIPADSPTQRVG 73 >gi|309792382|ref|ZP_07686850.1| DNA ligase, NAD-dependent [Oscillochloris trichoides DG6] gi|308225603|gb|EFO79363.1| DNA ligase, NAD-dependent [Oscillochloris trichoides DG6] Length = 674 Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ E + +E L + H YY LDDP +D YD + L L+ PEL D P Sbjct: 1 MAESELVQRIERLRALLREHNYRYYVLDDPNVSDAEYDALMRELRHLEATHPELCSPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|220906114|ref|YP_002481425.1| NAD-dependent DNA ligase LigA [Cyanothece sp. PCC 7425] gi|254781305|sp|B8HV17|DNLJ_CYAP4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219862725|gb|ACL43064.1| DNA ligase, NAD-dependent [Cyanothece sp. PCC 7425] Length = 738 Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++E+ LV+ A + YY LD P+ D +YD++ L L+ Q+PEL D P V Sbjct: 22 QRVLELRQLVQRASYA---YYVLDAPILEDVVYDQLYRELQDLETQYPELLTPDSPTQRV 78 Query: 118 G 118 G Sbjct: 79 G 79 >gi|260753112|ref|YP_003226005.1| DNA ligase, NAD-dependent [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552475|gb|ACV75421.1| DNA ligase, NAD-dependent [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 731 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 LS+ +A+IE+E L + H+ Y+ D+P D YD + R +++ FP+L D P Sbjct: 26 LSREQAVIELERLANLISHYDHLYHDKDNPAVPDSEYDALVLRNRRIEQFFPDLIRPDSP 85 Query: 114 WNTVG 118 VG Sbjct: 86 SKKVG 90 >gi|240850882|ref|YP_002972282.1| DNA ligase [Bartonella grahamii as4aup] gi|240268005|gb|ACS51593.1| DNA ligase [Bartonella grahamii as4aup] Length = 719 Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 33/66 (50%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +L+ EA E+E+L K H Y R D P +D YD + R ++ FPEL D Sbjct: 8 NLTAVEAESELEWLAKEIARHDVLYNRDDQPEISDAEYDALRRRNAEIEALFPELIRVDS 67 Query: 113 PWNTVG 118 P + +G Sbjct: 68 PSHKIG 73 >gi|163868703|ref|YP_001609915.1| NAD-dependent DNA ligase LigA [Bartonella tribocorum CIP 105476] gi|190359235|sp|A9IW95|DNLJ_BART1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|161018362|emb|CAK01920.1| DNA ligase [Bartonella tribocorum CIP 105476] Length = 719 Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 34/68 (50%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + +L+ EA E+E+L K H Y R D P +D YD + R ++ FPEL Sbjct: 6 IKNLTVVEAERELEWLAKEIARHDVLYNRDDQPEISDAEYDALRRRNAEIEALFPELIRV 65 Query: 111 DHPWNTVG 118 D P + +G Sbjct: 66 DSPSHKIG 73 >gi|153872826|ref|ZP_02001606.1| NAD-dependent DNA ligase [Beggiatoa sp. PS] gi|152070708|gb|EDN68394.1| NAD-dependent DNA ligase [Beggiatoa sp. PS] Length = 670 Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 24/43 (55%) Query: 76 WYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +YY LD+P D YD++ L AL+E +P L D P VG Sbjct: 24 YYYVLDEPRIPDSEYDKLMRELHALEENYPALITADSPTQRVG 66 >gi|299529801|ref|ZP_07043234.1| DNA ligase, NAD-dependent [Comamonas testosteroni S44] gi|298722215|gb|EFI63139.1| DNA ligase, NAD-dependent [Comamonas testosteroni S44] Length = 708 Score = 42.4 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 19/41 (46%), Positives = 24/41 (58%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY LD P DG YDRV ++L+AL+ +P L D P V Sbjct: 47 YYVLDTPTVPDGEYDRVYQQLEALEGAYPALVTPDSPTQRV 87 >gi|264678823|ref|YP_003278730.1| DNA ligase, NAD-dependent [Comamonas testosteroni CNB-2] gi|262209336|gb|ACY33434.1| DNA ligase, NAD-dependent [Comamonas testosteroni CNB-2] Length = 708 Score = 42.4 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 19/41 (46%), Positives = 24/41 (58%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY LD P DG YDRV ++L+AL+ +P L D P V Sbjct: 47 YYVLDTPTVPDGEYDRVYQQLEALEGAYPALVTPDSPTQRV 87 >gi|317010835|gb|ADU84582.1| NAD-dependent DNA ligase LigA [Helicobacter pylori SouthAfrica7] Length = 657 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL ++ HH YY LD+P+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYLNTLS-HH---YYNLDEPIVSDAVYDELYQELKAYEEENPSYIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|241760920|ref|ZP_04759009.1| DNA ligase, NAD-dependent [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374539|gb|EER64000.1| DNA ligase, NAD-dependent [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 731 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 LS+ +A+IE+E L + H+ Y+ D+P D YD + R +++ FP+L D P Sbjct: 26 LSREQAVIELERLANLISHYDHLYHDKDNPAVPDSEYDALVLRNRRIEQFFPDLIRPDSP 85 Query: 114 WNTVG 118 VG Sbjct: 86 SKKVG 90 >gi|300173629|ref|YP_003772795.1| DNA ligase, NAD-dependent [Leuconostoc gasicomitatum LMG 18811] gi|299888008|emb|CBL91976.1| DNA ligase, NAD-dependent [Leuconostoc gasicomitatum LMG 18811] Length = 681 Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 35/74 (47%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 L + K + LS+ A E+ L + YY D P+ D +YD + RL AL+ F Sbjct: 2 LPELKPIEKLSREAAQHEIAKLQDDLRQYGIAYYEQDAPIVEDYIYDALYARLVALETVF 61 Query: 105 PELFDEDHPWNTVG 118 P+ + D P VG Sbjct: 62 PQFINPDSPTQNVG 75 >gi|238063192|ref|ZP_04607901.1| DNA ligase, NAD-dependent [Micromonospora sp. ATCC 39149] gi|237885003|gb|EEP73831.1| DNA ligase, NAD-dependent [Micromonospora sp. ATCC 39149] Length = 702 Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY LD P +D +DR L+AL+ +FP L D P +G Sbjct: 31 HQYRYYVLDAPTVSDAEFDRQLRELEALEAEFPALRTPDSPTQRIG 76 >gi|297616809|ref|YP_003701968.1| DNA ligase, NAD-dependent [Syntrophothermus lipocalidus DSM 12680] gi|297144646|gb|ADI01403.1| DNA ligase, NAD-dependent [Syntrophothermus lipocalidus DSM 12680] Length = 668 Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD PL +D YDR+ L L++ +P+L D P VG Sbjct: 18 HDYHYYVLDQPLISDAEYDRLFRELVELEQAYPDLVTPDSPTQRVG 63 >gi|289581750|ref|YP_003480216.1| DNA ligase, NAD-dependent [Natrialba magadii ATCC 43099] gi|289531303|gb|ADD05654.1| DNA ligase, NAD-dependent [Natrialba magadii ATCC 43099] Length = 699 Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 LS EA +VE L H + YY +DPL D YD + ERL L+ F +L D P Sbjct: 27 LSDDEAEQQVEQLRDAIREHDRRYYVENDPLIADRTYDTLFERLQVLESTF-DLSHPDSP 85 Query: 114 WNTVG 118 +VG Sbjct: 86 TRSVG 90 >gi|163794455|ref|ZP_02188426.1| NAD-dependent DNA ligase [alpha proteobacterium BAL199] gi|159180179|gb|EDP64702.1| NAD-dependent DNA ligase [alpha proteobacterium BAL199] Length = 696 Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 32/66 (48%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 K V LS EA E+ L + Y+ D P+ TD YD + R A++E+FP+L Sbjct: 9 GKPVEELSDAEAKAELRRLSDAISEADRQYHVEDAPVLTDAEYDALRRRNQAIEERFPDL 68 Query: 108 FDEDHP 113 D P Sbjct: 69 KLADSP 74 >gi|94984803|ref|YP_604167.1| DNA ligase, NAD-dependent [Deinococcus geothermalis DSM 11300] gi|122986680|sp|Q1J0I6|DNLJ_DEIGD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|94555084|gb|ABF44998.1| DNA ligase, NAD-dependent [Deinococcus geothermalis DSM 11300] Length = 684 Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H + YY LD P D YDR+ L AL+ PE E+ P TVG Sbjct: 34 HNRAYYELDAPEIPDDEYDRLVRELRALEAAHPEWVAENSPAQTVG 79 >gi|312880304|ref|ZP_07740104.1| DNA ligase, NAD-dependent [Aminomonas paucivorans DSM 12260] gi|310783595|gb|EFQ23993.1| DNA ligase, NAD-dependent [Aminomonas paucivorans DSM 12260] Length = 696 Score = 42.0 bits (97), Expect = 0.024, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 64 EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E +I LH + YY LDDP+ D YD + L +L+ P+L D D P VG Sbjct: 19 ELTEQIRLHDHR-YYVLDDPVLPDDAYDALLRELRSLERAHPDLADPDSPTGRVG 72 >gi|310768269|gb|ADP13219.1| NAD-dependent DNA ligase LigA [Erwinia sp. Ejp617] Length = 670 Score = 42.0 bits (97), Expect = 0.024, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +L + H++ Y+ LD P D YDR+ L L+ Q PEL D P VG Sbjct: 7 KITHLRTLLRHYEYQYHVLDAPAVPDAEYDRLMGELRELEAQHPELLTSDSPTQRVG 63 >gi|260576789|ref|ZP_05844774.1| DNA ligase, NAD-dependent [Rhodobacter sp. SW2] gi|259021041|gb|EEW24352.1| DNA ligase, NAD-dependent [Rhodobacter sp. SW2] Length = 705 Score = 42.0 bits (97), Expect = 0.024, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K + L++ EA +E + L + Y++ D P TD YD + RL A++ FP+L Sbjct: 5 KAIEQLTEAEAAVEWQELARAVAQANIDYHQNDAPKLTDATYDAMKRRLAAIEVLFPQL- 63 Query: 109 DEDHPWNTVG 118 D P + VG Sbjct: 64 ATDSPTSKVG 73 >gi|332038149|gb|EGI74596.1| DNA ligase [Pseudoalteromonas haloplanktis ANT/505] Length = 672 Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 26/57 (45%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +L H YY LD P D YDR+ L AL+ Q PE D P VG Sbjct: 8 QINHLRTTLEQHNYNYYVLDTPSIPDSEYDRLLRELSALEMQHPEFLTADSPTQKVG 64 >gi|146312580|ref|YP_001177654.1| NAD-dependent DNA ligase LigA [Enterobacter sp. 638] gi|190359255|sp|A4WD23|DNLJ_ENT38 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145319456|gb|ABP61603.1| DNA ligase, NAD-dependent [Enterobacter sp. 638] Length = 671 Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q PEL D P VG Sbjct: 17 HHEYLYHVMDAPEVPDAEYDRLMRELRELEAQHPELVTPDSPTQRVG 63 >gi|307297347|ref|ZP_07577153.1| DNA ligase, NAD-dependent [Thermotogales bacterium mesG1.Ag.4.2] gi|306916607|gb|EFN46989.1| DNA ligase, NAD-dependent [Thermotogales bacterium mesG1.Ag.4.2] Length = 665 Score = 42.0 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EA ++ L K +H YY LDDP D YD + L L+EQ+PEL D P V Sbjct: 6 EARKRIDELRKEIDYHAYRYYVLDDPEIPDSEYDNLLRTLIDLEEQYPELKTPDSPSIRV 65 Query: 118 G 118 G Sbjct: 66 G 66 >gi|83942325|ref|ZP_00954786.1| DNA ligase, NAD-dependent [Sulfitobacter sp. EE-36] gi|83846418|gb|EAP84294.1| DNA ligase, NAD-dependent [Sulfitobacter sp. EE-36] Length = 706 Score = 42.0 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 LS+ EA E+ L + Y+ D P +D YDR+ R A++E+FP L D P Sbjct: 10 LSEEEAKAELARLADLLGRANTAYHTQDAPDLSDAEYDRLKRRNQAIEERFPGLKRADSP 69 Query: 114 WNTVG 118 + VG Sbjct: 70 SDKVG 74 >gi|317014035|gb|ADU81471.1| NAD-dependent DNA ligase LigA [Helicobacter pylori Gambia94/24] Length = 656 Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL ++ HH YY LD+P+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYLNTLS-HH---YYNLDEPIVSDAVYDELYQELKAYEEENPNRIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|296104078|ref|YP_003614224.1| NAD-dependent DNA ligase LigA [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058537|gb|ADF63275.1| NAD-dependent DNA ligase LigA [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 671 Score = 42.0 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q PEL D P VG Sbjct: 17 HHEYLYHVMDAPEVPDAEYDRLMRELRDLEAQHPELITPDSPTQRVG 63 >gi|166364069|ref|YP_001656342.1| DNA ligase [Microcystis aeruginosa NIES-843] gi|254781371|sp|B0JTW2|DNLJ_MICAN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166086442|dbj|BAG01150.1| DNA ligase [Microcystis aeruginosa NIES-843] Length = 669 Score = 42.0 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LDDP D +YD++ L+ +++++P+L D P VG Sbjct: 25 YYVLDDPFIPDSVYDQLYRELEDIEKRYPQLITPDSPTQRVG 66 >gi|109947386|ref|YP_664614.1| NAD-dependent DNA ligase LigA [Helicobacter acinonychis str. Sheeba] gi|123362647|sp|Q17XL1|DNLJ_HELAH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|109714607|emb|CAJ99615.1| DNA ligase [Helicobacter acinonychis str. Sheeba] Length = 654 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL ++ HH YY LD+P+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYLNTLS-HH---YYNLDEPIVSDAVYDELYQELKAYEEKNPSQIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|328542977|ref|YP_004303086.1| DNA ligase, NAD(+)-dependent [Polymorphum gilvum SL003B-26A1] gi|326412723|gb|ADZ69786.1| DNA ligase, NAD(+)-dependent [Polymorphum gilvum SL003B-26A1] Length = 721 Score = 42.0 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 69 IALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 IA H Q+ Y+ D P +D YD + R A++E+FP+L ED P +G Sbjct: 29 IAAHDQR-YFAEDAPTVSDAEYDALRRRNAAIEERFPDLVREDSPSARIG 77 >gi|15611625|ref|NP_223276.1| NAD-dependent DNA ligase LigA [Helicobacter pylori J99] gi|7674020|sp|Q9ZLM1|DNLJ_HELPJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|4155109|gb|AAD06141.1| DNA LIGASE [Helicobacter pylori J99] Length = 656 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL ++ HH YY LD+P+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYLNTLS-HH---YYNLDEPIVSDAVYDELYQELKAYEEENPNRIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|294661389|ref|YP_003573265.1| hypothetical protein Aasi_1926 [Candidatus Amoebophilus asiaticus 5a2] gi|254781251|sp|C3L496|DNLJ_AMOA5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|227336540|gb|ACP21137.1| hypothetical protein Aasi_1926 [Candidatus Amoebophilus asiaticus 5a2] Length = 671 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 36/65 (55%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K +A E++ L + +H K YY P +D +D++ E+L AL+ QFP+L + P Sbjct: 1 MDKEQARKEIKRLTALVAYHNKLYYEEAQPEISDYEFDQLLEKLIALENQFPDLRLPNSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|157371681|ref|YP_001479670.1| NAD-dependent DNA ligase LigA [Serratia proteamaculans 568] gi|190359284|sp|A8GHF2|DNLJ_SERP5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157323445|gb|ABV42542.1| DNA ligase, NAD-dependent [Serratia proteamaculans 568] Length = 673 Score = 42.0 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ L AL+ PEL D P VG Sbjct: 17 HHEYQYHVLDAPEVPDAEYDRLMGELRALESAHPELITADSPTQRVG 63 >gi|307248328|ref|ZP_07530352.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306855149|gb|EFM87328.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 682 Score = 42.0 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 31/62 (50%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 G ++E L + ++ +Y+ LD+PL D YDR+ L L+ Q PE D P Sbjct: 12 GTTFAQLEALRQKLREYEYYYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITADSPTQR 71 Query: 117 VG 118 VG Sbjct: 72 VG 73 >gi|307246220|ref|ZP_07528301.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255203|ref|ZP_07537019.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259638|ref|ZP_07541362.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852829|gb|EFM85053.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861831|gb|EFM93809.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866283|gb|EFM98147.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 682 Score = 42.0 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 31/62 (50%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 G ++E L + ++ +Y+ LD+PL D YDR+ L L+ Q PE D P Sbjct: 12 GTTFAQLEALRQKLREYEYYYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITADSPTQR 71 Query: 117 VG 118 VG Sbjct: 72 VG 73 >gi|74316642|ref|YP_314382.1| NAD-dependent DNA ligase [Thiobacillus denitrificans ATCC 25259] gi|123745545|sp|Q3SL40|DNLJ_THIDA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|74056137|gb|AAZ96577.1| NAD-dependent DNA ligase [Thiobacillus denitrificans ATCC 25259] Length = 686 Score = 42.0 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 20 HNYAYYVLDAPTIPDAEYDRLYHELEALEAAHPELVAADSPTRRVG 65 >gi|6573451|pdb|1B04|A Chain A, Structure Of The Adenylation Domain Of An Nad+ Dependent Ligase gi|6573452|pdb|1B04|B Chain B, Structure Of The Adenylation Domain Of An Nad+ Dependent Ligase Length = 318 Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust. Identities = 19/42 (45%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ + L A++EQ+PEL D P +G Sbjct: 24 YYVLDRPSVPDAEYDRLMQELIAIEEQYPELKTSDSPTQRIG 65 >gi|329770498|ref|ZP_08261876.1| DNA ligase [Gemella sanguinis M325] gi|328836247|gb|EGF85916.1| DNA ligase [Gemella sanguinis M325] Length = 666 Score = 42.0 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 34/57 (59%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ LVK+ + YY D+P +D YD + ++L+ L++++PEL E+ P VG Sbjct: 7 EIYKLVKLLNKYSYDYYVEDNPQISDTEYDTLYKQLEKLEKEYPELIQENSPTQRVG 63 >gi|307257368|ref|ZP_07539138.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864218|gb|EFM96131.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 682 Score = 42.0 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 31/62 (50%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 G ++E L + ++ +Y+ LD+PL D YDR+ L L+ Q PE D P Sbjct: 12 GTTFAQLEALRQKLREYEYYYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITADSPTQR 71 Query: 117 VG 118 VG Sbjct: 72 VG 73 >gi|254460861|ref|ZP_05074277.1| DNA ligase, NAD-dependent [Rhodobacterales bacterium HTCC2083] gi|206677450|gb|EDZ41937.1| DNA ligase, NAD-dependent [Rhodobacteraceae bacterium HTCC2083] Length = 706 Score = 42.0 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 34/68 (50%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 +T LS EA E+ L K Y+ D+P +D YD + +R A+++ FP L E Sbjct: 6 ITELSVEEARAELAALSKALNTANVAYHGKDNPDLSDANYDALKQRNAAIEDHFPTLVRE 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSKLVG 73 >gi|149173204|ref|ZP_01851835.1| DNA ligase [Planctomyces maris DSM 8797] gi|148848010|gb|EDL62342.1| DNA ligase [Planctomyces maris DSM 8797] Length = 671 Score = 42.0 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 29/57 (50%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+E L K HH + YY P TD YDR+ +RL+ L+ PE + P VG Sbjct: 6 EIEELRKQLEHHNRLYYLDAKPEITDREYDRLMKRLEQLETDHPEYDSPESPTKKVG 62 >gi|56751245|ref|YP_171946.1| NAD-dependent DNA ligase LigA [Synechococcus elongatus PCC 6301] gi|81299088|ref|YP_399296.1| NAD-dependent DNA ligase LigA [Synechococcus elongatus PCC 7942] gi|81596046|sp|Q5N2P4|DNLJ_SYNP6 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|123728245|sp|Q31RL0|DNLJ_SYNE7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|56686204|dbj|BAD79426.1| DNA ligase [Synechococcus elongatus PCC 6301] gi|81167969|gb|ABB56309.1| DNA ligase, NAD-dependent [Synechococcus elongatus PCC 7942] Length = 679 Score = 42.0 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P+ D +YDR+ L L++Q P L D P VG Sbjct: 31 YYVLDQPVMEDAVYDRLYRELQDLEQQHPSLITPDSPTQRVG 72 >gi|225873424|ref|YP_002754883.1| DNA ligase, NAD-dependent [Acidobacterium capsulatum ATCC 51196] gi|254781243|sp|C1F7S7|DNLJ_ACIC5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|225792636|gb|ACO32726.1| DNA ligase, NAD-dependent [Acidobacterium capsulatum ATCC 51196] Length = 677 Score = 42.0 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S A ++E L + HH+ YY D P D +D + +L L+ + PEL D P Sbjct: 1 MSHASAAQQIESLRESIRHHEYLYYVQDQPEIDDLAFDELMRKLQRLEAEHPELITPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|291613759|ref|YP_003523916.1| DNA ligase, NAD-dependent [Sideroxydans lithotrophicus ES-1] gi|291583871|gb|ADE11529.1| DNA ligase, NAD-dependent [Sideroxydans lithotrophicus ES-1] Length = 701 Score = 42.0 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 22/43 (51%) Query: 76 WYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 WYY D P D YD++ L AL+ Q PEL D P VG Sbjct: 23 WYYVKDMPRIPDAEYDKLFRELQALEAQHPELLASDSPTQRVG 65 >gi|190150622|ref|YP_001969147.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263969|ref|ZP_07545570.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|254781246|sp|B3H275|DNLJ_ACTP7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|189915753|gb|ACE62005.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870658|gb|EFN02401.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 682 Score = 42.0 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 31/62 (50%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 G ++E L + ++ +Y+ LD+PL D YDR+ L L+ Q PE D P Sbjct: 12 GTTFAQLEALRQKLREYEYYYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITADSPTQR 71 Query: 117 VG 118 VG Sbjct: 72 VG 73 >gi|165976722|ref|YP_001652315.1| NAD-dependent DNA ligase LigA [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190359223|sp|B0BQN6|DNLJ_ACTPJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|165876823|gb|ABY69871.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 682 Score = 42.0 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 31/62 (50%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 G ++E L + ++ +Y+ LD+PL D YDR+ L L+ Q PE D P Sbjct: 12 GTTFAQLEALRQKLREYEYYYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITADSPTQR 71 Query: 117 VG 118 VG Sbjct: 72 VG 73 >gi|328885211|emb|CCA58450.1| DNA ligase [Streptomyces venezuelae ATCC 10712] Length = 726 Score = 42.0 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 28/46 (60%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H+ YY D P+ +DG +D++ L+AL+E++PEL D P V Sbjct: 26 HRFRYYVKDQPVISDGEFDKLLRALEALEEEYPELRTPDSPTQKVA 71 >gi|256822391|ref|YP_003146354.1| NAD-dependent DNA ligase [Kangiella koreensis DSM 16069] gi|256795930|gb|ACV26586.1| DNA ligase, NAD-dependent [Kangiella koreensis DSM 16069] Length = 667 Score = 42.0 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +HQ YY LDDP D YDR+ L ++ + PEL D P VG Sbjct: 19 NHQ--YYVLDDPSVPDAEYDRLLRELQQIESEHPELISSDSPTQRVG 63 >gi|307261779|ref|ZP_07543445.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868597|gb|EFN00408.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 676 Score = 42.0 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 31/62 (50%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 G ++E L + ++ +Y+ LD+PL D YDR+ L L+ Q PE D P Sbjct: 6 GTTFAQLEALRQKLREYEYYYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITADSPTQR 65 Query: 117 VG 118 VG Sbjct: 66 VG 67 >gi|307250556|ref|ZP_07532498.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857372|gb|EFM89486.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 682 Score = 42.0 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 31/62 (50%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 G ++E L + ++ +Y+ LD+PL D YDR+ L L+ Q PE D P Sbjct: 12 GTTFAQLEALRQKLREYEYYYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITADSPTQR 71 Query: 117 VG 118 VG Sbjct: 72 VG 73 >gi|303250616|ref|ZP_07336813.1| NAD-dependent DNA ligase LigA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252937|ref|ZP_07534825.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650604|gb|EFL80763.1| NAD-dependent DNA ligase LigA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859575|gb|EFM91600.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 682 Score = 42.0 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 31/62 (50%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 G ++E L + ++ +Y+ LD+PL D YDR+ L L+ Q PE D P Sbjct: 12 GTTFAQLEALRQKLREYEYYYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITADSPTQR 71 Query: 117 VG 118 VG Sbjct: 72 VG 73 >gi|323136604|ref|ZP_08071685.1| DNA ligase, NAD-dependent [Methylocystis sp. ATCC 49242] gi|322397921|gb|EFY00442.1| DNA ligase, NAD-dependent [Methylocystis sp. ATCC 49242] Length = 705 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 32/68 (47%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V LS EA E L + + + YYR D PL D YD R +AL++ FPEL Sbjct: 12 VDELSPAEARAEHARLGEDIARYDEAYYREDAPLVPDAEYDAARRRYEALEKAFPELVTP 71 Query: 111 DHPWNTVG 118 + VG Sbjct: 72 ESLTRKVG 79 >gi|51893963|ref|YP_076654.1| NAD-dependent DNA ligase [Symbiobacterium thermophilum IAM 14863] gi|81388077|sp|Q67KI8|DNLJ_SYMTH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|51857652|dbj|BAD41810.1| NAD-dependent DNA ligase [Symbiobacterium thermophilum IAM 14863] Length = 673 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 29/53 (54%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L++ HH+ YY ++P +D +D + + L L+E FP+L D P VG Sbjct: 13 LIETIRHHEYLYYVKNEPEISDAAFDELMQELKQLEEAFPDLRRPDSPTQRVG 65 >gi|297570387|ref|YP_003691731.1| DNA ligase, NAD-dependent [Desulfurivibrio alkaliphilus AHT2] gi|296926302|gb|ADH87112.1| DNA ligase, NAD-dependent [Desulfurivibrio alkaliphilus AHT2] Length = 680 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 31/64 (48%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 +K +A V L + +H YY LDDP D YD + L L+E++P L D P Sbjct: 10 AKEQARQRVAELREQIRYHNHRYYVLDDPEIPDAEYDALFRELQELEERYPGLAGADSPS 69 Query: 115 NTVG 118 VG Sbjct: 70 RQVG 73 >gi|183599716|ref|ZP_02961209.1| hypothetical protein PROSTU_03219 [Providencia stuartii ATCC 25827] gi|188021975|gb|EDU60015.1| hypothetical protein PROSTU_03219 [Providencia stuartii ATCC 25827] Length = 671 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YD++ E L A++ + PE D P VG Sbjct: 16 HHEYQYHVLDAPEIPDAEYDKLMEELKAIEAEHPEWITSDSPTQRVG 62 >gi|90408119|ref|ZP_01216289.1| DNA ligase [Psychromonas sp. CNPT3] gi|90310805|gb|EAS38920.1| DNA ligase [Psychromonas sp. CNPT3] Length = 667 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 32/58 (55%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++V+ L + + YY LD+P +D YD V ++L A++ + P L E+ P VG Sbjct: 5 LQVKKLTEQLEEYNYQYYVLDEPSISDAQYDAVFQQLKAIESEHPHLLHENSPTQKVG 62 >gi|258645494|ref|ZP_05732963.1| DNA ligase, NAD-dependent [Dialister invisus DSM 15470] gi|260402847|gb|EEW96394.1| DNA ligase, NAD-dependent [Dialister invisus DSM 15470] Length = 669 Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 32/62 (51%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E + + E L K +H YY LD P TD +DR+ L L++++PE+ D P Sbjct: 4 AEIIKKAEELRKKLRYHSYLYYVLDKPEITDFEFDRLYRSLVDLEKEYPEIVTPDSPTQR 63 Query: 117 VG 118 VG Sbjct: 64 VG 65 >gi|259907817|ref|YP_002648173.1| NAD-dependent DNA ligase LigA [Erwinia pyrifoliae Ep1/96] gi|224963439|emb|CAX54927.1| DNA ligase [Erwinia pyrifoliae Ep1/96] gi|283477688|emb|CAY73604.1| DNA ligase [Erwinia pyrifoliae DSM 12163] Length = 678 Score = 41.6 bits (96), Expect = 0.032, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +L + H++ Y+ LD P D YDR+ L L+ Q PEL D P VG Sbjct: 7 KITHLRTLLRHYEYQYHVLDAPAVPDAEYDRLMGELRDLEAQHPELLTSDSPTQRVG 63 >gi|87199755|ref|YP_497012.1| DNA ligase, NAD-dependent [Novosphingobium aromaticivorans DSM 12444] gi|123763512|sp|Q2G7J5|DNLJ_NOVAD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|87135436|gb|ABD26178.1| DNA ligase, NAD-dependent [Novosphingobium aromaticivorans DSM 12444] Length = 721 Score = 41.6 bits (96), Expect = 0.032, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 33/68 (48%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++L++ EA E+ L + H + Y+ D P TD YD + R L+ FP L D Sbjct: 4 SALTEAEAANELMRLARQIAKHNRLYHAEDSPEITDAEYDALVRRNAELEAAFPHLIRPD 63 Query: 112 HPWNTVGY 119 P +G+ Sbjct: 64 SPSAQIGH 71 >gi|91793866|ref|YP_563517.1| DNA ligase, NAD-dependent [Shewanella denitrificans OS217] gi|123165936|sp|Q12L82|DNLJ_SHEDO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|91715868|gb|ABE55794.1| DNA ligase, NAD-dependent [Shewanella denitrificans OS217] Length = 670 Score = 41.6 bits (96), Expect = 0.032, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 30/58 (51%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ LV H YY D P TD YD++ ++L AL+ + PEL D P VG Sbjct: 6 LQIANLVNELNQHNIKYYVDDAPSVTDAYYDKLMQQLLALEAEHPELIQSDSPSRRVG 63 >gi|21673293|ref|NP_661358.1| DNA ligase, NAD-dependent [Chlorobium tepidum TLS] gi|81791793|sp|Q8KF74|DNLJ_CHLTE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|21646383|gb|AAM71700.1| DNA ligase, NAD-dependent [Chlorobium tepidum TLS] Length = 674 Score = 41.6 bits (96), Expect = 0.032, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 9/74 (12%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 +DKAK + K A IE H + YY P +D +D++ +RL L+++F Sbjct: 1 MDKAKAQQEIGKLRAEIE---------RHNRLYYLEAKPEISDFEFDKLLKRLIMLEKEF 51 Query: 105 PELFDEDHPWNTVG 118 PEL D P VG Sbjct: 52 PELVTPDSPSQRVG 65 >gi|114565926|ref|YP_753080.1| DNA ligase (NAD(+)) [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122318951|sp|Q0AZZ5|DNLJ_SYNWW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|114336861|gb|ABI67709.1| DNA ligase (NAD(+)) [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 661 Score = 41.6 bits (96), Expect = 0.032, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD PL +D YDR+ + L L+E++P+ D P V Sbjct: 17 HDYHYYILDAPLISDSGYDRLMQELKKLEEEYPQYITADSPTQRVA 62 >gi|304398312|ref|ZP_07380186.1| DNA ligase, NAD-dependent [Pantoea sp. aB] gi|304354178|gb|EFM18551.1| DNA ligase, NAD-dependent [Pantoea sp. aB] Length = 672 Score = 41.6 bits (96), Expect = 0.033, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+E+ P+L D P VG Sbjct: 17 HHEYLYHVMDAPEVPDAEYDRLMRELRQLEEEHPDLITPDSPTQRVG 63 >gi|308187689|ref|YP_003931820.1| DNA ligase [Pantoea vagans C9-1] gi|308058199|gb|ADO10371.1| DNA ligase [Pantoea vagans C9-1] Length = 672 Score = 41.6 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+E+ P+L D P VG Sbjct: 17 HHEYLYHVMDAPEVPDAEYDRLMRELRQLEEEHPDLITPDSPTQRVG 63 >gi|150021387|ref|YP_001306741.1| DNA ligase, NAD-dependent [Thermosipho melanesiensis BI429] gi|190359297|sp|A6LN55|DNLJ_THEM4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|149793908|gb|ABR31356.1| DNA ligase, NAD-dependent [Thermosipho melanesiensis BI429] Length = 662 Score = 41.6 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 33/57 (57%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+E L K +H YY L DP+ +D YDR+ ++L L++++P+ + P VG Sbjct: 7 EIERLRKEIEYHNYRYYVLADPIISDEEYDRLLKKLIELEKKYPKFSSPNSPTQKVG 63 >gi|220931078|ref|YP_002507986.1| DNA ligase, NAD-dependent [Halothermothrix orenii H 168] gi|254781343|sp|B8D122|DNLJ_HALOH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219992388|gb|ACL68991.1| DNA ligase, NAD-dependent [Halothermothrix orenii H 168] Length = 670 Score = 41.6 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 31/57 (54%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L + +H+ YY LDDP +D +D + +RL L+E+ P L D P VG Sbjct: 8 EIRDLREKIRYHEYRYYVLDDPEISDAEFDELIQRLIDLEEKHPGLVTPDSPTQRVG 64 >gi|319408814|emb|CBI82471.1| DNA ligase [Bartonella schoenbuchensis R1] Length = 718 Score = 41.6 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 +DK V +L+ EA E+E+L K H Y D P +D YD + R ++ F Sbjct: 1 MDK-NAVKNLTALEAASELEWLAKEIARHDVLYNNNDQPEISDAQYDALRRRNTEIEALF 59 Query: 105 PELFDEDHPWNTVG 118 PEL D P +G Sbjct: 60 PELIRTDSPSYKIG 73 >gi|313106533|ref|ZP_07792762.1| DNA ligase [Pseudomonas aeruginosa 39016] gi|310879264|gb|EFQ37858.1| DNA ligase [Pseudomonas aeruginosa 39016] Length = 794 Score = 41.6 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 24/45 (53%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 H YY LD+P D YDR+ L AL+ ++P+L D P V Sbjct: 21 HNYRYYVLDEPSIPDAEYDRLFRELQALETEYPQLLTPDSPTQRV 65 >gi|308063596|gb|ADO05483.1| NAD-dependent DNA ligase LigA [Helicobacter pylori Sat464] Length = 656 Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL ++ HH YY LDDP+ +D +YD + + L +E+ P + P Sbjct: 4 SQKEYLERIEYLNTLS-HH---YYNLDDPIVSDAVYDELYQELKVYEEKNPNNIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|296390104|ref|ZP_06879579.1| NAD-dependent DNA ligase LigA [Pseudomonas aeruginosa PAb1] Length = 794 Score = 41.6 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 24/45 (53%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 H YY LD+P D YDR+ L AL+ ++P+L D P V Sbjct: 21 HNYRYYVLDEPSIPDAEYDRLFRELQALETEYPQLLTPDSPTQRV 65 >gi|104780921|ref|YP_607419.1| NAD-dependent DNA ligase LigA [Pseudomonas entomophila L48] gi|122985912|sp|Q1ICK0|DNLJ_PSEE4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|95109908|emb|CAK14613.1| NAD-dependent DNA ligase [Pseudomonas entomophila L48] Length = 784 Score = 41.6 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P D YDR+ L AL+ + P+L D P VG Sbjct: 16 QHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPQLVTADSPTQRVG 62 >gi|15596726|ref|NP_250220.1| NAD-dependent DNA ligase LigA [Pseudomonas aeruginosa PAO1] gi|107100960|ref|ZP_01364878.1| hypothetical protein PaerPA_01001990 [Pseudomonas aeruginosa PACS2] gi|218892513|ref|YP_002441382.1| NAD-dependent DNA ligase LigA [Pseudomonas aeruginosa LESB58] gi|81541359|sp|Q9I3I4|DNLJ_PSEAE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781394|sp|B7UVJ3|DNLJ_PSEA8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|9947487|gb|AAG04918.1|AE004581_5 DNA ligase [Pseudomonas aeruginosa PAO1] gi|218772741|emb|CAW28526.1| DNA ligase [Pseudomonas aeruginosa LESB58] Length = 794 Score = 41.6 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 24/45 (53%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 H YY LD+P D YDR+ L AL+ ++P+L D P V Sbjct: 21 HNYRYYVLDEPSIPDAEYDRLFRELQALEAEYPQLLTPDSPTQRV 65 >gi|254239878|ref|ZP_04933200.1| DNA ligase [Pseudomonas aeruginosa 2192] gi|126193256|gb|EAZ57319.1| DNA ligase [Pseudomonas aeruginosa 2192] Length = 794 Score = 41.6 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 24/45 (53%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 H YY LD+P D YDR+ L AL+ ++P+L D P V Sbjct: 21 HNYRYYVLDEPSIPDAEYDRLFRELQALEAEYPQLLTPDSPTQRV 65 >gi|254234624|ref|ZP_04927947.1| DNA ligase [Pseudomonas aeruginosa C3719] gi|126166555|gb|EAZ52066.1| DNA ligase [Pseudomonas aeruginosa C3719] Length = 794 Score = 41.6 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 24/45 (53%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 H YY LD+P D YDR+ L AL+ ++P+L D P V Sbjct: 21 HNYRYYVLDEPSIPDAEYDRLFRELQALEAEYPQLLTPDSPTQRV 65 >gi|116049473|ref|YP_791724.1| NAD-dependent DNA ligase LigA [Pseudomonas aeruginosa UCBPP-PA14] gi|122258581|sp|Q02K12|DNLJ_PSEAB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|115584694|gb|ABJ10709.1| DNA ligase [Pseudomonas aeruginosa UCBPP-PA14] Length = 794 Score = 41.6 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 24/45 (53%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 H YY LD+P D YDR+ L AL+ ++P+L D P V Sbjct: 21 HNYRYYVLDEPSIPDAEYDRLFRELQALETEYPQLLTPDSPTQRV 65 >gi|241889713|ref|ZP_04777011.1| DNA ligase, NAD-dependent [Gemella haemolysans ATCC 10379] gi|241863335|gb|EER67719.1| DNA ligase, NAD-dependent [Gemella haemolysans ATCC 10379] Length = 663 Score = 41.6 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 33/57 (57%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ LV + + YY D+P TD YD + ++L+ L+E++PEL E+ P VG Sbjct: 7 EILKLVSLLNKYSYEYYVEDNPQITDTEYDTLYKQLEKLEEKYPELILENSPTQRVG 63 >gi|166216279|sp|A0LI67|DNLJ_SYNFM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 675 Score = 41.6 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A +E L + HH YY LD P +D YD + L L+E +P L D P V Sbjct: 6 KAHARIEALREEIRHHNYLYYVLDRPEISDEAYDGLFRELVRLEESYPALITPDSPTQRV 65 Query: 118 G 118 G Sbjct: 66 G 66 >gi|212710592|ref|ZP_03318720.1| hypothetical protein PROVALCAL_01658 [Providencia alcalifaciens DSM 30120] gi|212686673|gb|EEB46201.1| hypothetical protein PROVALCAL_01658 [Providencia alcalifaciens DSM 30120] Length = 678 Score = 41.6 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YD++ + L AL+ + PEL D P VG Sbjct: 23 HHEYLYHVMDAPEIPDVEYDKLMQELKALEAEHPELITTDSPTQRVG 69 >gi|332141273|ref|YP_004427011.1| NAD-dependent DNA ligase [Alteromonas macleodii str. 'Deep ecotype'] gi|327551295|gb|AEA98013.1| NAD-dependent DNA ligase [Alteromonas macleodii str. 'Deep ecotype'] Length = 171 Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust. Identities = 19/42 (45%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LDDP D +YDR + L AL++Q+P L + P VG Sbjct: 26 YYVLDDPSIPDAVYDRDMQSLIALEKQYPSLQSPNSPSQKVG 67 >gi|116669859|ref|YP_830792.1| DNA ligase, NAD-dependent [Arthrobacter sp. FB24] gi|166215392|sp|A0JUH2|DNLJ_ARTS2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116609968|gb|ABK02692.1| DNA ligase, NAD-dependent [Arthrobacter sp. FB24] Length = 790 Score = 41.6 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E E LV+ H+ YY+ D P+ +D +D + RL+ ++ PEL D P VG Sbjct: 54 EYENLVEEVRKHRFAYYQEDAPIISDAEFDELFRRLETIEAMHPELVANDSPTQEVG 110 >gi|167770441|ref|ZP_02442494.1| hypothetical protein ANACOL_01786 [Anaerotruncus colihominis DSM 17241] gi|167667036|gb|EDS11166.1| hypothetical protein ANACOL_01786 [Anaerotruncus colihominis DSM 17241] Length = 664 Score = 41.6 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V+ L + H YY LD P +D YDR+ L L+E FPEL + P VG Sbjct: 14 VQELRTVIEKHNHSYYVLDRPTVSDYEYDRLLHELIDLEEAFPELASDHSPTRRVG 69 >gi|116748867|ref|YP_845554.1| DNA ligase, NAD-dependent [Syntrophobacter fumaroxidans MPOB] gi|116697931|gb|ABK17119.1| DNA ligase, NAD-dependent [Syntrophobacter fumaroxidans MPOB] Length = 694 Score = 41.6 bits (96), Expect = 0.036, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A +E L + HH YY LD P +D YD + L L+E +P L D P V Sbjct: 25 KAHARIEALREEIRHHNYLYYVLDRPEISDEAYDGLFRELVRLEESYPALITPDSPTQRV 84 Query: 118 G 118 G Sbjct: 85 G 85 >gi|269127766|ref|YP_003301136.1| DNA ligase, NAD-dependent [Thermomonospora curvata DSM 43183] gi|268312724|gb|ACY99098.1| DNA ligase, NAD-dependent [Thermomonospora curvata DSM 43183] Length = 722 Score = 41.6 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P +D YDR+ L L+E+ PEL D P VG Sbjct: 29 YYVLDRPTLSDAEYDRLMRELRELEERHPELVTPDSPTQRVG 70 >gi|313201136|ref|YP_004039794.1| DNA ligase, nad-dependent [Methylovorus sp. MP688] gi|312440452|gb|ADQ84558.1| DNA ligase, NAD-dependent [Methylovorus sp. MP688] Length = 689 Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LDDP D YD++ L AL+ PEL D P VG Sbjct: 32 YYVLDDPSVPDSEYDKLFRELQALEHAHPELLTPDSPTQRVG 73 >gi|70729275|ref|YP_259012.1| NAD-dependent DNA ligase LigA [Pseudomonas fluorescens Pf-5] gi|123734866|sp|Q4KFH1|DNLJ_PSEF5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|68343574|gb|AAY91180.1| DNA ligase, NAD-dependent [Pseudomonas fluorescens Pf-5] Length = 788 Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + PEL D P VG Sbjct: 17 QHNYRYHVLDEPSIPDAEYDRLFRELKALEAEHPELVTSDSPTQRVG 63 >gi|315502322|ref|YP_004081209.1| DNA ligase, nad-dependent [Micromonospora sp. L5] gi|315408941|gb|ADU07058.1| DNA ligase, NAD-dependent [Micromonospora sp. L5] Length = 717 Score = 41.6 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY LD P TD +D+ L+AL+ ++P L D P VG Sbjct: 46 HQYRYYVLDAPTVTDAEFDKQLRELEALEAEYPALRTPDSPTQRVG 91 >gi|302865766|ref|YP_003834403.1| DNA ligase, NAD-dependent [Micromonospora aurantiaca ATCC 27029] gi|302568625|gb|ADL44827.1| DNA ligase, NAD-dependent [Micromonospora aurantiaca ATCC 27029] Length = 717 Score = 41.6 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY LD P TD +D+ L+AL+ ++P L D P VG Sbjct: 46 HQYRYYVLDAPTVTDAEFDKQLRELEALEAEYPALRTPDSPTQRVG 91 >gi|261822799|ref|YP_003260905.1| NAD-dependent DNA ligase LigA [Pectobacterium wasabiae WPP163] gi|261606812|gb|ACX89298.1| DNA ligase, NAD-dependent [Pectobacterium wasabiae WPP163] Length = 681 Score = 41.6 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 29/58 (50%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + V L ++ HH+ Y+ D P D YD++ + L AL+ PEL D P VG Sbjct: 13 LRVAELRRVLRHHEYKYHVEDAPEIPDSEYDKLMQELKALEADHPELVTSDSPTQRVG 70 >gi|33151983|ref|NP_873336.1| NAD-dependent DNA ligase LigA [Haemophilus ducreyi 35000HP] gi|81423646|sp|Q7VMX7|DNLJ_HAEDU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|33148205|gb|AAP95725.1| DNA ligase [Haemophilus ducreyi 35000HP] Length = 686 Score = 41.6 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 26/42 (61%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ L++PL D YDR+ +L +++Q+PEL D P VG Sbjct: 32 YHVLNNPLVPDAEYDRLINQLKNIEQQYPELITPDSPTQRVG 73 >gi|323697702|ref|ZP_08109614.1| DNA ligase, NAD-dependent [Desulfovibrio sp. ND132] gi|323457634|gb|EGB13499.1| DNA ligase, NAD-dependent [Desulfovibrio desulfuricans ND132] Length = 684 Score = 41.6 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY LDDP +D +D + L AL+ + PEL D + P VG Sbjct: 19 HHNYRYYVLDDPEISDQEFDVLFRELAALEAEHPELDDPNSPTRRVG 65 >gi|256847801|ref|ZP_05553246.1| DNA ligase, NAD-dependent [Lactobacillus coleohominis 101-4-CHN] gi|256715490|gb|EEU30466.1| DNA ligase, NAD-dependent [Lactobacillus coleohominis 101-4-CHN] Length = 674 Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 34/65 (52%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ EA E+ L + + K YY D+P D +YDR +RL L+ +FPEL D P Sbjct: 6 ITLAEAKKEIGPLRQQLIQWGKEYYEQDNPSVEDYVYDRQYQRLVELEARFPELVTPDSP 65 Query: 114 WNTVG 118 VG Sbjct: 66 TQRVG 70 >gi|325982988|ref|YP_004295390.1| DNA ligase, NAD-dependent [Nitrosomonas sp. AL212] gi|325532507|gb|ADZ27228.1| DNA ligase, NAD-dependent [Nitrosomonas sp. AL212] Length = 677 Score = 41.6 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 68 KIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +I LH+ + YY LD P D YDR+ L +++ +P+L D P VG Sbjct: 18 EIELHNYR-YYVLDTPTIPDAEYDRLLRELQHIEQDYPQLITADSPTQRVG 67 >gi|134102614|ref|YP_001108275.1| NAD-dependent DNA ligase LigA [Saccharopolyspora erythraea NRRL 2338] gi|291004701|ref|ZP_06562674.1| NAD-dependent DNA ligase LigA [Saccharopolyspora erythraea NRRL 2338] gi|166216238|sp|A4FMS5|DNLJ_SACEN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|133915237|emb|CAM05350.1| DNA ligase, NAD-dependent [Saccharopolyspora erythraea NRRL 2338] Length = 727 Score = 41.6 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV+ HQ YY LD P +DG +D + L L+ P L D D P VG Sbjct: 50 LVEQVRAHQFRYYVLDSPTISDGEFDELFTELQTLESDHPALRDPDSPTQVVG 102 >gi|189499438|ref|YP_001958908.1| DNA ligase, NAD-dependent [Chlorobium phaeobacteroides BS1] gi|254781285|sp|B3EM49|DNLJ_CHLPB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|189494879|gb|ACE03427.1| DNA ligase, NAD-dependent [Chlorobium phaeobacteroides BS1] Length = 684 Score = 41.6 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 34/65 (52%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K +A+ E+ L + H YY L P +D YD + E+L AL+ +FPEL D P Sbjct: 1 MDKKQAVAEIIRLREEIDRHNYRYYVLARPEISDFQYDAMLEKLVALEGEFPELKTSDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|312962450|ref|ZP_07776941.1| DNA ligase [Pseudomonas fluorescens WH6] gi|311283377|gb|EFQ61967.1| DNA ligase [Pseudomonas fluorescens WH6] Length = 789 Score = 41.2 bits (95), Expect = 0.041, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + PEL D P VG Sbjct: 17 QHNYRYHVLDEPSIPDAEYDRLFHELKALEAEHPELVTRDSPTQRVG 63 >gi|300087757|ref|YP_003758279.1| DNA ligase, NAD-dependent [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527490|gb|ADJ25958.1| DNA ligase, NAD-dependent [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 687 Score = 41.2 bits (95), Expect = 0.041, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EA ++ L K HH YY D+P +D YD + L L+ +FPEL ++ P V Sbjct: 3 EAKKRIDTLRKQITHHNYLYYVKDEPEISDQEYDILFRELQILENEFPELASDESPTKIV 62 Query: 118 G 118 G Sbjct: 63 G 63 >gi|257095174|ref|YP_003168815.1| NAD-dependent DNA ligase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047698|gb|ACV36886.1| DNA ligase, NAD-dependent [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 675 Score = 41.2 bits (95), Expect = 0.042, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L AL+ + PEL D P VG Sbjct: 21 YYVLDAPSIADADYDRLFRELQALEAEHPELVSRDSPTQRVG 62 >gi|154685157|ref|YP_001420318.1| NAD-dependent DNA ligase LigA [Bacillus amyloliquefaciens FZB42] gi|166215394|sp|A7Z261|DNLJ_BACA2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|154351008|gb|ABS73087.1| LigA [Bacillus amyloliquefaciens FZB42] Length = 669 Score = 41.2 bits (95), Expect = 0.042, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A E L + + YY LD+P D YDR+ + L A++E+ PEL D P Sbjct: 2 MDKETAKHRAEELRRTIDQYSYEYYTLDEPSVPDSEYDRLMQELIAIEEEHPELRTPDSP 61 Query: 114 WNTVG 118 VG Sbjct: 62 TQRVG 66 >gi|302542307|ref|ZP_07294649.1| DNA ligase, NAD-dependent [Streptomyces hygroscopicus ATCC 53653] gi|302459925|gb|EFL23018.1| DNA ligase, NAD-dependent [Streptomyces himastatinicus ATCC 53653] Length = 740 Score = 41.2 bits (95), Expect = 0.042, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EA E L + H+ YY D P+ +D +DR+ RL+AL+E PEL D P V Sbjct: 12 EARDEHAKLAEQVEEHRFRYYVKDAPIVSDAEFDRLLRRLEALEEDHPELRTPDSPTQKV 71 Query: 118 G 118 Sbjct: 72 A 72 >gi|220915846|ref|YP_002491150.1| DNA ligase, NAD-dependent [Anaeromyxobacter dehalogenans 2CP-1] gi|254781252|sp|B8JD56|DNLJ_ANAD2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219953700|gb|ACL64084.1| DNA ligase, NAD-dependent [Anaeromyxobacter dehalogenans 2CP-1] Length = 687 Score = 41.2 bits (95), Expect = 0.042, Method: Composition-based stats. Identities = 19/41 (46%), Positives = 22/41 (53%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY LD PL D YDR+ L AL+ + PEL D P V Sbjct: 24 YYVLDQPLLADAEYDRLMHELQALEAEHPELVTADSPTQRV 64 >gi|52313150|emb|CAH55605.1| DNA ligase (NAD dependent) [Bacillus amyloliquefaciens FZB42] Length = 668 Score = 41.2 bits (95), Expect = 0.042, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A E L + + YY LD+P D YDR+ + L A++E+ PEL D P Sbjct: 1 MDKETAKHRAEELRRTIDQYSYEYYTLDEPSVPDSEYDRLMQELIAIEEEHPELRTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|225013054|ref|ZP_03703469.1| DNA ligase (NAD(+)) [Flavobacteria bacterium MS024-2A] gi|225002782|gb|EEG40763.1| DNA ligase (NAD(+)) [Flavobacteria bacterium MS024-2A] Length = 183 Score = 41.2 bits (95), Expect = 0.043, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 35/57 (61%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L ++ H YY LDDP+ +D +D++ ++L+ L+ Q P+L D + P VG Sbjct: 7 KIEALREVLHDHNHRYYILDDPIISDYEFDQLLQQLNELEVQNPDLTDLNSPTRRVG 63 >gi|284042834|ref|YP_003393174.1| DNA ligase, NAD-dependent [Conexibacter woesei DSM 14684] gi|283947055|gb|ADB49799.1| DNA ligase, NAD-dependent [Conexibacter woesei DSM 14684] Length = 684 Score = 41.2 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY LDDP D YD + + L AL+ PEL D P VG Sbjct: 19 YHGHRYYDLDDPEIGDDAYDALLDELRALEAAHPELLTPDSPTQRVG 65 >gi|326387612|ref|ZP_08209218.1| DNA ligase, NAD-dependent [Novosphingobium nitrogenifigens DSM 19370] gi|326207658|gb|EGD58469.1| DNA ligase, NAD-dependent [Novosphingobium nitrogenifigens DSM 19370] Length = 687 Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 34/69 (49%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + ++++ +A E+ L + +H + Y+ LD P D YD + R ++ FP L Sbjct: 3 IDAMTEADAANELMRLARQIAYHDRLYHTLDTPEIADAEYDALVRRNAEIEAAFPHLIRA 62 Query: 111 DHPWNTVGY 119 D P VG+ Sbjct: 63 DSPSRKVGH 71 >gi|73541575|ref|YP_296095.1| NAD-dependent DNA ligase [Ralstonia eutropha JMP134] gi|123732913|sp|Q470D2|DNLJ_RALEJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|72118988|gb|AAZ61251.1| NAD-dependent DNA ligase [Ralstonia eutropha JMP134] Length = 711 Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 30/73 (41%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D + L A V++L H YY LD P D YD + L AL+ + P Sbjct: 11 DASAPAGGLPPATAAERVQWLRDELDRHNYQYYVLDAPTIPDAEYDALFTELQALEAEHP 70 Query: 106 ELFDEDHPWNTVG 118 EL D P VG Sbjct: 71 ELLTPDSPTQRVG 83 >gi|293376177|ref|ZP_06622422.1| DNA ligase (NAD(+)) [Turicibacter sanguinis PC909] gi|292645164|gb|EFF63229.1| DNA ligase (NAD(+)) [Turicibacter sanguinis PC909] Length = 669 Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 30/58 (51%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + +E L K+ + YY LD P +D YDR+ + L L+E+ PEL P VG Sbjct: 11 LRIEELTKLLTQYNHEYYVLDKPSVSDREYDRLMQELMELEEKHPELKSNTSPTVRVG 68 >gi|196250518|ref|ZP_03149209.1| DNA ligase, NAD-dependent [Geobacillus sp. G11MC16] gi|196210008|gb|EDY04776.1| DNA ligase, NAD-dependent [Geobacillus sp. G11MC16] Length = 670 Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ + L A+++Q+PEL D P +G Sbjct: 24 YYVLDRPSVPDAEYDRLMQELIAIEKQYPELKTSDSPTQRIG 65 >gi|138893932|ref|YP_001124385.1| NAD-dependent DNA ligase LigA [Geobacillus thermodenitrificans NG80-2] gi|166215760|sp|A4IJY6|DNLJ_GEOTN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|134265445|gb|ABO65640.1| DNA ligase [Geobacillus thermodenitrificans NG80-2] Length = 670 Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ + L A+++Q+PEL D P +G Sbjct: 24 YYVLDRPSVPDAEYDRLMQELIAIEKQYPELKTSDSPTQRIG 65 >gi|113475951|ref|YP_722012.1| NAD-dependent DNA ligase LigA [Trichodesmium erythraeum IMS101] gi|123160812|sp|Q112N5|DNLJ_TRIEI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|110166999|gb|ABG51539.1| DNA ligase, NAD-dependent [Trichodesmium erythraeum IMS101] Length = 774 Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P+ D +YD + L L+ Q+P+L D P VG Sbjct: 26 YYVLDQPIMEDAVYDHLLRELQELESQYPQLIVSDSPTQRVG 67 >gi|323143662|ref|ZP_08078336.1| DNA ligase (NAD+) [Succinatimonas hippei YIT 12066] gi|322416595|gb|EFY07255.1| DNA ligase (NAD+) [Succinatimonas hippei YIT 12066] Length = 696 Score = 41.2 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 29/53 (54%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + K YY DDP+ TD YDR+ +L+ +++ P + D P VG Sbjct: 11 LVALLNRYAKAYYVDDDPIVTDSEYDRLYRQLEIMEQADPTIISPDSPTRRVG 63 >gi|311278661|ref|YP_003940892.1| DNA ligase, NAD-dependent [Enterobacter cloacae SCF1] gi|308747856|gb|ADO47608.1| DNA ligase, NAD-dependent [Enterobacter cloacae SCF1] Length = 671 Score = 41.2 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPELPDAEYDRLMRELRELEAKHPELITPDSPTQRVG 63 >gi|288941063|ref|YP_003443303.1| DNA ligase, NAD-dependent [Allochromatium vinosum DSM 180] gi|288896435|gb|ADC62271.1| DNA ligase, NAD-dependent [Allochromatium vinosum DSM 180] Length = 696 Score = 41.2 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY LDDP D YDR+ L L+ + P L D P VG Sbjct: 19 YHNHRYYVLDDPEIPDAEYDRLFAELQQLEAEHPALITPDSPTQRVG 65 >gi|270159993|ref|ZP_06188649.1| DNA ligase [Legionella longbeachae D-4968] gi|269988332|gb|EEZ94587.1| DNA ligase [Legionella longbeachae D-4968] Length = 671 Score = 41.2 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 20/42 (47%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+PL D YDR L L+ Q PEL D P VG Sbjct: 24 YYVLDEPLVPDVEYDRCFRALQNLEAQHPELLTADSPTQRVG 65 >gi|237732406|ref|ZP_04562887.1| NAD-dependent DNA ligase LigA [Citrobacter sp. 30_2] gi|226907945|gb|EEH93863.1| NAD-dependent DNA ligase LigA [Citrobacter sp. 30_2] Length = 671 Score = 41.2 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMCELRELEAQHPELITPDSPTQRVG 63 >gi|289165264|ref|YP_003455402.1| DNA ligase [Legionella longbeachae NSW150] gi|288858437|emb|CBJ12315.1| DNA ligase [Legionella longbeachae NSW150] Length = 671 Score = 41.2 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 20/42 (47%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+PL D YDR L L+ Q PEL D P VG Sbjct: 24 YYVLDEPLVPDVEYDRCFRALQNLEAQHPELLTADSPTQRVG 65 >gi|227114832|ref|ZP_03828488.1| NAD-dependent DNA ligase LigA [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 684 Score = 41.2 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + V L ++ HH+ Y+ D P D YD++ + L AL+ PEL D P VG Sbjct: 14 AALRVAELRRVLRHHEYKYHVEDAPEIPDIEYDKLMQELKALEADHPELVTSDSPTQRVG 73 >gi|238855396|ref|ZP_04645707.1| DNA ligase, NAD-dependent [Lactobacillus jensenii 269-3] gi|260665363|ref|ZP_05866211.1| DNA ligase, NAD-dependent [Lactobacillus jensenii SJ-7A-US] gi|282932093|ref|ZP_06337550.1| DNA ligase (NAD(+)) [Lactobacillus jensenii 208-1] gi|238831994|gb|EEQ24320.1| DNA ligase, NAD-dependent [Lactobacillus jensenii 269-3] gi|260560867|gb|EEX26843.1| DNA ligase, NAD-dependent [Lactobacillus jensenii SJ-7A-US] gi|281303772|gb|EFA95917.1| DNA ligase (NAD(+)) [Lactobacillus jensenii 208-1] Length = 669 Score = 41.2 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 34/68 (50%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + L+K A E+E L K + YY D P D +YD+ +RL L++QFPEL Sbjct: 1 MAKLNKKAAQEEIENLRKKLNTWAEQYYAQDAPSVEDAVYDQNYQRLVELEKQFPELVTS 60 Query: 111 DHPWNTVG 118 D VG Sbjct: 61 DSITQRVG 68 >gi|114776845|ref|ZP_01451888.1| DNA ligase, NAD-dependent [Mariprofundus ferrooxydans PV-1] gi|114552931|gb|EAU55362.1| DNA ligase, NAD-dependent [Mariprofundus ferrooxydans PV-1] Length = 670 Score = 41.2 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 30/63 (47%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 K +E+L H YY LD P+ +D YDR+ L++L+ + E D P Sbjct: 4 KATLTARIEHLRSQLREHNYRYYILDAPVISDAEYDRLLRELESLEAELGEPVPADSPTR 63 Query: 116 TVG 118 TVG Sbjct: 64 TVG 66 >gi|308172548|ref|YP_003919253.1| DNA ligase [Bacillus amyloliquefaciens DSM 7] gi|307605412|emb|CBI41783.1| DNA ligase [Bacillus amyloliquefaciens DSM 7] gi|328910657|gb|AEB62253.1| DNA ligase [Bacillus amyloliquefaciens LL3] Length = 669 Score = 41.2 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+P D YDR+ + L A++E+ PEL D P VG Sbjct: 25 YYTLDEPSVPDSEYDRLMQELIAIEEEHPELRTPDSPTQRVG 66 >gi|328552313|gb|AEB22805.1| NAD-dependent DNA ligase LigA [Bacillus amyloliquefaciens TA208] Length = 668 Score = 41.2 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+P D YDR+ + L A++E+ PEL D P VG Sbjct: 24 YYTLDEPSVPDSEYDRLMQELIAIEEEHPELRTPDSPTQRVG 65 >gi|262203140|ref|YP_003274348.1| DNA ligase, NAD-dependent [Gordonia bronchialis DSM 43247] gi|262086487|gb|ACY22455.1| DNA ligase, NAD-dependent [Gordonia bronchialis DSM 43247] Length = 691 Score = 41.2 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ TDG +D + RL L++ PEL D P VG Sbjct: 28 HQFRYYVKDSPVITDGEFDALLRRLQDLEDAHPELAAPDSPTKLVG 73 >gi|73667316|ref|YP_303332.1| NAD-dependent DNA ligase [Ehrlichia canis str. Jake] gi|123732189|sp|Q3YRC1|DNLJ_EHRCJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|72394457|gb|AAZ68734.1| NAD-dependent DNA ligase [Ehrlichia canis str. Jake] Length = 677 Score = 41.2 bits (95), Expect = 0.047, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 34/65 (52%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + EA +E++ L HH YY D+P TD YD + + + + E FPEL ++ Sbjct: 1 MKQEEAKLELDKLNSQIQHHDFLYYTQDNPQITDAEYDVLCHKRNLILESFPELASNNNY 60 Query: 114 WNTVG 118 + VG Sbjct: 61 QDNVG 65 >gi|325838923|ref|ZP_08166729.1| DNA ligase (NAD+) [Turicibacter sp. HGF1] gi|325490664|gb|EGC92975.1| DNA ligase (NAD+) [Turicibacter sp. HGF1] Length = 662 Score = 41.2 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 30/58 (51%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + +E L K+ + YY LD P +D YDR+ + L L+E+ PEL P VG Sbjct: 4 LRIEELTKLLTQYNHEYYVLDKPSVSDREYDRLMQELMELEEKHPELKSNTSPTVRVG 61 >gi|164686703|ref|ZP_02210731.1| hypothetical protein CLOBAR_00298 [Clostridium bartlettii DSM 16795] gi|164604093|gb|EDQ97558.1| hypothetical protein CLOBAR_00298 [Clostridium bartlettii DSM 16795] Length = 674 Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 30/56 (53%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L+ + +H + YY D P D YD + + L L+E+ PEL D P N VG Sbjct: 7 IEELINLINYHNEKYYNQDSPEIEDFEYDNLMKELIKLEEENPELKRNDSPSNRVG 62 >gi|270307958|ref|YP_003330016.1| DNA ligase, NAD-dependent [Dehalococcoides sp. VS] gi|270153850|gb|ACZ61688.1| DNA ligase, NAD-dependent [Dehalococcoides sp. VS] Length = 680 Score = 41.2 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 29/57 (50%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+E L + H + YY D+P +D YD + RL L+E PEL + P VG Sbjct: 10 EIENLRREINRHNQLYYVQDNPEISDSEYDALLRRLKELEEAHPELVTPNSPTQRVG 66 >gi|308050127|ref|YP_003913693.1| DNA ligase, NAD-dependent [Ferrimonas balearica DSM 9799] gi|307632317|gb|ADN76619.1| DNA ligase, NAD-dependent [Ferrimonas balearica DSM 9799] Length = 685 Score = 41.2 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 30/61 (49%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A +E L ++ + YY LD+P D YDR+ L AL+ + P L D P V Sbjct: 12 QAKDRIEQLSQLLNDYNHQYYVLDNPSVPDAEYDRLMRELQALEAEHPALRQPDSPTQRV 71 Query: 118 G 118 G Sbjct: 72 G 72 >gi|32267302|ref|NP_861334.1| NAD-dependent DNA ligase LigA [Helicobacter hepaticus ATCC 51449] gi|81665265|sp|Q7VF74|DNLJ_HELHP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|32263355|gb|AAP78400.1| DNA ligase [Helicobacter hepaticus ATCC 51449] Length = 650 Score = 41.2 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ E +V+ L K+A H YY LD+P+ TD YD + ++ +E+ P L D P Sbjct: 1 MTSQEYYTQVQILKKMAYH----YYVLDEPIATDEQYDSLYHQIVRFEEENPHLIDASSP 56 Query: 114 WNTVG 118 VG Sbjct: 57 TQRVG 61 >gi|319787332|ref|YP_004146807.1| DNA ligase, NAD-dependent [Pseudoxanthomonas suwonensis 11-1] gi|317465844|gb|ADV27576.1| DNA ligase, NAD-dependent [Pseudoxanthomonas suwonensis 11-1] Length = 788 Score = 41.2 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD P TD YD + L+AL+ + PEL ED P VG Sbjct: 25 YHELDAPDITDAQYDALVRELEALEREHPELAAEDSPTRRVG 66 >gi|312144161|ref|YP_003995607.1| DNA ligase, NAD-dependent [Halanaerobium sp. 'sapolanicus'] gi|311904812|gb|ADQ15253.1| DNA ligase, NAD-dependent [Halanaerobium sp. 'sapolanicus'] Length = 670 Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LDDP +D +D++ + L L+ QFPEL D P VG Sbjct: 27 YFVLDDPQISDAEFDKLMQDLLKLESQFPELVTADSPTQRVG 68 >gi|311694426|gb|ADP97299.1| NAD-dependent DNA ligase [marine bacterium HP15] Length = 678 Score = 41.2 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 26/56 (46%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 VE L H YY LDDP D YDR+ L L+ +PEL + P VG Sbjct: 12 VEELRSAIDDHNYRYYVLDDPRVPDAEYDRLFRELQGLETDYPELASDTSPTRRVG 67 >gi|284006788|emb|CBA72055.1| DNA ligase [Arsenophonus nasoniae] Length = 670 Score = 41.2 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ + L L+ + PE D P VG Sbjct: 17 HHEYLYHVLDTPEIPDAEYDRLMQELKKLEAEHPEWITADSPTQRVG 63 >gi|157144662|ref|YP_001451981.1| NAD-dependent DNA ligase LigA [Citrobacter koseri ATCC BAA-895] gi|166215574|sp|A8ADI2|DNLJ_CITK8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157081867|gb|ABV11545.1| hypothetical protein CKO_00382 [Citrobacter koseri ATCC BAA-895] Length = 671 Score = 41.2 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQHPDLITPDSPSQRVG 63 >gi|218439827|ref|YP_002378156.1| DNA ligase, NAD-dependent [Cyanothece sp. PCC 7424] gi|254781306|sp|B7K8U0|DNLJ_CYAP7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218172555|gb|ACK71288.1| DNA ligase, NAD-dependent [Cyanothece sp. PCC 7424] Length = 678 Score = 41.2 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+P+ D +YD++ L ++ Q+PEL D P VG Sbjct: 26 YYVLDNPIMEDVVYDQLYRELQNIETQYPELITPDSPTQRVG 67 >gi|15807063|ref|NP_295792.1| DNA ligase [Deinococcus radiodurans R1] gi|81550876|sp|Q9RSQ5|DNLJ_DEIRA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|6459863|gb|AAF11619.1|AE002043_4 DNA ligase [Deinococcus radiodurans R1] Length = 700 Score = 41.2 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 68 KIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ALH++ YY D P D YDR++ L L+ PE D+ P TVG Sbjct: 24 EVALHNRA-YYEQDAPTIPDDEYDRLARELRELEAAHPEFADDHSPVQTVG 73 >gi|288919113|ref|ZP_06413452.1| DNA ligase, NAD-dependent [Frankia sp. EUN1f] gi|288349457|gb|EFC83695.1| DNA ligase, NAD-dependent [Frankia sp. EUN1f] Length = 715 Score = 41.2 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P D YD + LD +++Q+PEL D P V Sbjct: 52 HAHRYYVLDAPTIADAEYDALLRELDQIEQQYPELRTADSPTQKVA 97 >gi|227530245|ref|ZP_03960294.1| DNA ligase (NAD(+)) [Lactobacillus vaginalis ATCC 49540] gi|227349834|gb|EEJ40125.1| DNA ligase (NAD(+)) [Lactobacillus vaginalis ATCC 49540] Length = 680 Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 34/68 (50%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L+ +A E+ L K K YY D P D +YDR +RL ++++FPEL Sbjct: 8 VAQLTLDQAKEEIGPLRKQIAQWGKEYYEQDSPTVEDYVYDRQYQRLVQIEQRFPELQTP 67 Query: 111 DHPWNTVG 118 D P VG Sbjct: 68 DSPTQQVG 75 >gi|239995022|ref|ZP_04715546.1| NAD-dependent DNA ligase [Alteromonas macleodii ATCC 27126] Length = 70 Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 32/61 (52%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A ++E L + YY +DDP D +YDR + L AL++Q+P L + P V Sbjct: 7 QAKQQIETLRNTLNEYNYQYYVMDDPSVPDAVYDRDMQALIALEKQYPTLQSPNSPSQKV 66 Query: 118 G 118 G Sbjct: 67 G 67 >gi|238897965|ref|YP_002923645.1| DNA ligase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|257096312|sp|C4K4K4|DNLJ_HAMD5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|229465723|gb|ACQ67497.1| DNA ligase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 702 Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 58 EAMIE-VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++M+E + L + HH+ Y+ D P TD YD + E+L + Q+PEL + D P Sbjct: 2 KSMLEKINQLRDVLKHHEYLYHVNDAPEITDAEYDALLEKLREWESQYPELMNPDSPTQK 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|291278945|ref|YP_003495780.1| NAD-dependent DNA ligase [Deferribacter desulfuricans SSM1] gi|290753647|dbj|BAI80024.1| NAD-dependent DNA ligase [Deferribacter desulfuricans SSM1] Length = 663 Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 29/48 (60%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 +H YY L+DP+ +D YD++ +RL ++ ++PE+ P VGY Sbjct: 18 YHDYRYYVLNDPVISDYEYDQLYKRLKEIESKYPEIISPYSPTQRVGY 65 >gi|158334366|ref|YP_001515538.1| NAD-dependent DNA ligase LigA [Acaryochloris marina MBIC11017] gi|190359221|sp|B0C308|DNLJ_ACAM1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|158304607|gb|ABW26224.1| DNA ligase, NAD-dependent [Acaryochloris marina MBIC11017] Length = 675 Score = 41.2 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD PL D +YD++ L L+ Q+P+L D P VG Sbjct: 26 YYGLDAPLMEDAVYDQLYHELVDLEAQYPQLITPDSPTQRVG 67 >gi|330502846|ref|YP_004379715.1| NAD-dependent DNA ligase LigA [Pseudomonas mendocina NK-01] gi|328917132|gb|AEB57963.1| NAD-dependent DNA ligase LigA [Pseudomonas mendocina NK-01] Length = 786 Score = 41.2 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P D YDR+ L AL+ + PEL + P VG Sbjct: 18 HNYRYYVLDEPSVPDAEYDRLFRELQALEAEHPELVTPESPTQRVG 63 >gi|319951546|ref|ZP_08025350.1| NAD-dependent DNA ligase LigA [Dietzia cinnamea P4] gi|319434794|gb|EFV90110.1| NAD-dependent DNA ligase LigA [Dietzia cinnamea P4] Length = 726 Score = 41.2 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 28/53 (52%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + HQ YY D P+ +D +DR+ L AL+E++P L D P VG Sbjct: 27 LAETVRDHQFRYYVKDAPIVSDAEFDRLFGELQALEEKYPALRTADSPTQLVG 79 >gi|170016835|ref|YP_001727754.1| DNA ligase, NAD-dependent [Leuconostoc citreum KM20] gi|254781358|sp|B1MXQ8|DNLJ_LEUCK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|169803692|gb|ACA82310.1| DNA ligase, NAD-dependent [Leuconostoc citreum KM20] Length = 681 Score = 41.2 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 31/68 (45%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L+ A E+ L K + YY D PL D +YD RL L+ QFP+ Sbjct: 8 VNNLTTQMAQQEIATLQKRLTDYGVAYYEEDAPLVEDYIYDAFYARLVLLEAQFPQFVTP 67 Query: 111 DHPWNTVG 118 D P VG Sbjct: 68 DSPTQNVG 75 >gi|146307768|ref|YP_001188233.1| NAD-dependent DNA ligase LigA [Pseudomonas mendocina ymp] gi|190359273|sp|A4XVY5|DNLJ_PSEMY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145575969|gb|ABP85501.1| DNA ligase, NAD-dependent [Pseudomonas mendocina ymp] Length = 786 Score = 41.2 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P D YDR+ L AL+ + PEL + P VG Sbjct: 18 HNYRYYVLDEPSVPDAEYDRLFRELQALEAEHPELVTPESPTQRVG 63 >gi|15645240|ref|NP_207410.1| NAD-dependent DNA ligase LigA [Helicobacter pylori 26695] gi|3182983|sp|O25336|DNLJ_HELPY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|2313737|gb|AAD07680.1| DNA ligase (lig) [Helicobacter pylori 26695] Length = 656 Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%) Query: 64 EYLVKIAL-----HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL +IA HH YY LD+P+ +D +YD + + L A +E+ P + P VG Sbjct: 7 EYLERIAYLNTLSHH---YYNLDEPIVSDAIYDELYQELKAYEEKNPNGIQANSPTQKVG 63 >gi|317009372|gb|ADU79952.1| NAD-dependent DNA ligase LigA [Helicobacter pylori India7] Length = 656 Score = 41.2 bits (95), Expect = 0.053, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 8/60 (13%) Query: 64 EYLVKIAL-----HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL +I HH YY LDDP+ +D +YD + + L A +E+ P + P VG Sbjct: 7 EYLERIGYLNTLSHH---YYNLDDPIVSDAVYDELYQELKAYEEKNPSHIQANSPTQKVG 63 >gi|254411541|ref|ZP_05025318.1| DNA ligase, NAD-dependent [Microcoleus chthonoplastes PCC 7420] gi|196182042|gb|EDX77029.1| DNA ligase, NAD-dependent [Microcoleus chthonoplastes PCC 7420] Length = 676 Score = 41.2 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D+P+ D +YD++ L L+ Q+PEL D P VG Sbjct: 22 YYVRDNPMMEDAVYDQLYRELQDLESQYPELVTPDSPTQRVG 63 >gi|194307280|gb|ACF42137.1| DNA ligase [Mycobacterium lepromatosis] Length = 686 Score = 41.2 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ +D +D + RL L+EQ PEL D P +G Sbjct: 19 HQFRYYVRDAPIISDAEFDALLGRLTVLEEQHPELRTPDSPTQLIG 64 >gi|223986795|ref|ZP_03636777.1| hypothetical protein HOLDEFILI_04100 [Holdemania filiformis DSM 12042] gi|223961228|gb|EEF65758.1| hypothetical protein HOLDEFILI_04100 [Holdemania filiformis DSM 12042] Length = 663 Score = 40.8 bits (94), Expect = 0.054, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD P +D YD++ L L++Q PELFD + P VG Sbjct: 20 YHVLDHPTVSDAEYDQLMRELITLEQQHPELFDPNSPTQRVG 61 >gi|332088205|gb|EGI93327.1| DNA ligase, NAD-dependent [Shigella boydii 5216-82] Length = 671 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|325496534|gb|EGC94393.1| NAD-dependent DNA ligase LigA [Escherichia fergusonii ECD227] Length = 671 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|324009590|gb|EGB78809.1| DNA ligase, NAD-dependent [Escherichia coli MS 57-2] Length = 671 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|323967844|gb|EGB63256.1| DNA ligase [Escherichia coli M863] gi|327252066|gb|EGE63738.1| DNA ligase, NAD-dependent [Escherichia coli STEC_7v] Length = 671 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAKHPELITPDSPTQRVG 63 >gi|323188282|gb|EFZ73575.1| DNA ligase, NAD-dependent [Escherichia coli RN587/1] Length = 671 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|331673883|ref|ZP_08374646.1| DNA ligase, NAD-dependent [Escherichia coli TA280] gi|331069156|gb|EGI40548.1| DNA ligase, NAD-dependent [Escherichia coli TA280] Length = 671 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|331653837|ref|ZP_08354838.1| DNA ligase, NAD-dependent [Escherichia coli M718] gi|331048686|gb|EGI20762.1| DNA ligase, NAD-dependent [Escherichia coli M718] Length = 671 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|300940348|ref|ZP_07154941.1| DNA ligase, NAD-dependent [Escherichia coli MS 21-1] gi|300454839|gb|EFK18332.1| DNA ligase, NAD-dependent [Escherichia coli MS 21-1] Length = 671 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|301022290|ref|ZP_07186186.1| DNA ligase, NAD-dependent [Escherichia coli MS 69-1] gi|300397609|gb|EFJ81147.1| DNA ligase, NAD-dependent [Escherichia coli MS 69-1] Length = 671 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|293410811|ref|ZP_06654387.1| DNA ligase [Escherichia coli B354] gi|291471279|gb|EFF13763.1| DNA ligase [Escherichia coli B354] Length = 671 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|293415682|ref|ZP_06658325.1| DNA ligase [Escherichia coli B185] gi|291433330|gb|EFF06309.1| DNA ligase [Escherichia coli B185] Length = 671 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|281179485|dbj|BAI55815.1| DNA ligase [Escherichia coli SE15] Length = 671 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|218690549|ref|YP_002398761.1| NAD-dependent DNA ligase LigA [Escherichia coli ED1a] gi|254781322|sp|B7MY64|DNLJ_ECO81 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218428113|emb|CAR09030.2| DNA ligase, NAD(+)-dependent [Escherichia coli ED1a] Length = 671 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|218700877|ref|YP_002408506.1| NAD-dependent DNA ligase LigA [Escherichia coli IAI39] gi|254781321|sp|B7NPU7|DNLJ_ECO7I RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218370863|emb|CAR18680.1| DNA ligase, NAD(+)-dependent [Escherichia coli IAI39] Length = 671 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|218548148|ref|YP_002381939.1| NAD-dependent DNA ligase LigA [Escherichia fergusonii ATCC 35469] gi|331684067|ref|ZP_08384663.1| DNA ligase, NAD-dependent [Escherichia coli H299] gi|254781331|sp|B7LL73|DNLJ_ESCF3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218355689|emb|CAQ88301.1| DNA ligase, NAD(+)-dependent [Escherichia fergusonii ATCC 35469] gi|315298233|gb|EFU57493.1| DNA ligase, NAD-dependent [Escherichia coli MS 16-3] gi|331079019|gb|EGI50221.1| DNA ligase, NAD-dependent [Escherichia coli H299] Length = 671 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|91211748|ref|YP_541734.1| NAD-dependent DNA ligase LigA [Escherichia coli UTI89] gi|117624619|ref|YP_853532.1| NAD-dependent DNA ligase LigA [Escherichia coli APEC O1] gi|218559359|ref|YP_002392272.1| NAD-dependent DNA ligase LigA [Escherichia coli S88] gi|237704934|ref|ZP_04535415.1| NAD-dependent DNA ligase LigA [Escherichia sp. 3_2_53FAA] gi|331658566|ref|ZP_08359510.1| DNA ligase, NAD-dependent [Escherichia coli TA206] gi|123084405|sp|Q1R8W1|DNLJ_ECOUT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166215402|sp|A1ADS8|DNLJ_ECOK1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781318|sp|B7MHR5|DNLJ_ECO45 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|91073322|gb|ABE08203.1| DNA ligase [Escherichia coli UTI89] gi|115513743|gb|ABJ01818.1| NAD-dependent DNA ligase LigA [Escherichia coli APEC O1] gi|218366128|emb|CAR03873.1| DNA ligase, NAD(+)-dependent [Escherichia coli S88] gi|226901300|gb|EEH87559.1| NAD-dependent DNA ligase LigA [Escherichia sp. 3_2_53FAA] gi|294491726|gb|ADE90482.1| DNA ligase, NAD-dependent [Escherichia coli IHE3034] gi|307626016|gb|ADN70320.1| NAD-dependent DNA ligase LigA [Escherichia coli UM146] gi|315288164|gb|EFU47564.1| DNA ligase, NAD-dependent [Escherichia coli MS 110-3] gi|323949546|gb|EGB45434.1| DNA ligase [Escherichia coli H252] gi|323955668|gb|EGB51426.1| DNA ligase [Escherichia coli H263] gi|331054231|gb|EGI26258.1| DNA ligase, NAD-dependent [Escherichia coli TA206] Length = 671 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|24113756|ref|NP_708266.1| NAD-dependent DNA ligase LigA [Shigella flexneri 2a str. 301] gi|30063805|ref|NP_837976.1| NAD-dependent DNA ligase LigA [Shigella flexneri 2a str. 2457T] gi|110806352|ref|YP_689872.1| NAD-dependent DNA ligase LigA [Shigella flexneri 5 str. 8401] gi|81723177|sp|Q83K81|DNLJ_SHIFL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|122366427|sp|Q0T298|DNLJ_SHIF8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|24052834|gb|AAN43973.1| DNA ligase [Shigella flexneri 2a str. 301] gi|30042060|gb|AAP17786.1| DNA ligase [Shigella flexneri 2a str. 2457T] gi|110615900|gb|ABF04567.1| DNA ligase [Shigella flexneri 5 str. 8401] gi|281601828|gb|ADA74812.1| DNA ligase, NAD-dependent [Shigella flexneri 2002017] gi|313650866|gb|EFS15266.1| DNA ligase, NAD-dependent [Shigella flexneri 2a str. 2457T] Length = 671 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|87301433|ref|ZP_01084273.1| DNA ligase [Synechococcus sp. WH 5701] gi|87283650|gb|EAQ75604.1| DNA ligase [Synechococcus sp. WH 5701] Length = 698 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L+ A H YY LD P D +YDR+ L+ L+ PEL D P VG Sbjct: 7 ELRRLLNRAAHA---YYVLDSPEMEDAVYDRLYRELEQLERLHPELISPDSPTRRVG 60 >gi|157161876|ref|YP_001459194.1| NAD-dependent DNA ligase LigA [Escherichia coli HS] gi|253772690|ref|YP_003035521.1| NAD-dependent DNA ligase LigA [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162394|ref|YP_003045502.1| NAD-dependent DNA ligase LigA [Escherichia coli B str. REL606] gi|297517308|ref|ZP_06935694.1| NAD-dependent DNA ligase LigA [Escherichia coli OP50] gi|300928569|ref|ZP_07144093.1| DNA ligase, NAD-dependent [Escherichia coli MS 187-1] gi|190359254|sp|A8A2Q7|DNLJ_ECOHS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157067556|gb|ABV06811.1| DNA ligase, NAD-dependent [Escherichia coli HS] gi|242378018|emb|CAQ32789.1| DNA ligase [Escherichia coli BL21(DE3)] gi|253323734|gb|ACT28336.1| DNA ligase, NAD-dependent [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974295|gb|ACT39966.1| NAD-dependent DNA ligase LigA [Escherichia coli B str. REL606] gi|253978462|gb|ACT44132.1| NAD-dependent DNA ligase LigA [Escherichia coli BL21(DE3)] gi|300463441|gb|EFK26934.1| DNA ligase, NAD-dependent [Escherichia coli MS 187-1] gi|323961212|gb|EGB56824.1| DNA ligase [Escherichia coli H489] gi|323970900|gb|EGB66151.1| DNA ligase [Escherichia coli TA007] Length = 671 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|16130337|ref|NP_416906.1| DNA ligase, NAD(+)-dependent [Escherichia coli str. K-12 substr. MG1655] gi|89109225|ref|AP_003005.1| DNA ligase, NAD(+)-dependent [Escherichia coli str. K-12 substr. W3110] gi|170019306|ref|YP_001724260.1| NAD-dependent DNA ligase LigA [Escherichia coli ATCC 8739] gi|170082020|ref|YP_001731340.1| DNA ligase, NAD(+)-dependent [Escherichia coli str. K-12 substr. DH10B] gi|188495579|ref|ZP_03002849.1| DNA ligase, NAD-dependent [Escherichia coli 53638] gi|238901574|ref|YP_002927370.1| DNA ligase, NAD(+)-dependent [Escherichia coli BW2952] gi|256021895|ref|ZP_05435760.1| NAD-dependent DNA ligase LigA [Escherichia sp. 4_1_40B] gi|300951893|ref|ZP_07165701.1| DNA ligase, NAD-dependent [Escherichia coli MS 116-1] gi|300957240|ref|ZP_07169472.1| DNA ligase, NAD-dependent [Escherichia coli MS 175-1] gi|301023745|ref|ZP_07187485.1| DNA ligase, NAD-dependent [Escherichia coli MS 196-1] gi|312973347|ref|ZP_07787519.1| DNA ligase, NAD-dependent [Escherichia coli 1827-70] gi|2506362|sp|P15042|DNLJ_ECOLI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781324|sp|B1XA82|DNLJ_ECODH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781325|sp|B1IX60|DNLJ_ECOLC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|149242732|pdb|2OWO|A Chain A, Last Stop On The Road To Repair: Structure Of E.Coli Dna Ligase Bound To Nicked Dna-Adenylate gi|146613|gb|AAA24070.1| DNA ligase (EC 6.5.1.2) [Escherichia coli] gi|1788750|gb|AAC75464.1| DNA ligase, NAD(+)-dependent [Escherichia coli str. K-12 substr. MG1655] gi|85675396|dbj|BAA16282.2| DNA ligase, NAD(+)-dependent [Escherichia coli str. K12 substr. W3110] gi|169754234|gb|ACA76933.1| DNA ligase, NAD-dependent [Escherichia coli ATCC 8739] gi|169889855|gb|ACB03562.1| DNA ligase, NAD(+)-dependent [Escherichia coli str. K-12 substr. DH10B] gi|188490778|gb|EDU65881.1| DNA ligase, NAD-dependent [Escherichia coli 53638] gi|238860822|gb|ACR62820.1| DNA ligase, NAD(+)-dependent [Escherichia coli BW2952] gi|260448502|gb|ACX38924.1| DNA ligase, NAD-dependent [Escherichia coli DH1] gi|299880716|gb|EFI88927.1| DNA ligase, NAD-dependent [Escherichia coli MS 196-1] gi|300315993|gb|EFJ65777.1| DNA ligase, NAD-dependent [Escherichia coli MS 175-1] gi|300448878|gb|EFK12498.1| DNA ligase, NAD-dependent [Escherichia coli MS 116-1] gi|309702699|emb|CBJ02028.1| DNA ligase [Escherichia coli ETEC H10407] gi|310331942|gb|EFP99177.1| DNA ligase, NAD-dependent [Escherichia coli 1827-70] gi|315137042|dbj|BAJ44201.1| NAD-dependent DNA ligase LigA [Escherichia coli DH1] gi|315615662|gb|EFU96294.1| DNA ligase, NAD-dependent [Escherichia coli 3431] gi|323936436|gb|EGB32725.1| DNA ligase [Escherichia coli E1520] gi|323941344|gb|EGB37529.1| DNA ligase [Escherichia coli E482] Length = 671 Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|332089820|gb|EGI94921.1| DNA ligase, NAD-dependent [Shigella dysenteriae 155-74] Length = 671 Score = 40.8 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|329912476|ref|ZP_08275756.1| DNA ligase [Oxalobacteraceae bacterium IMCC9480] gi|327545605|gb|EGF30768.1| DNA ligase [Oxalobacteraceae bacterium IMCC9480] Length = 679 Score = 40.8 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P+ D YD + L+AL+ PEL D P VG Sbjct: 23 HAHAYYVLDNPVIPDADYDLLFRELEALEASHPELVTADSPTRRVG 68 >gi|324112923|gb|EGC06899.1| DNA ligase [Escherichia fergusonii B253] Length = 671 Score = 40.8 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|320196260|gb|EFW70884.1| DNA ligase [Escherichia coli WV_060327] Length = 671 Score = 40.8 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|301648064|ref|ZP_07247828.1| DNA ligase, NAD-dependent [Escherichia coli MS 146-1] gi|307139053|ref|ZP_07498409.1| NAD-dependent DNA ligase LigA [Escherichia coli H736] gi|331643032|ref|ZP_08344167.1| DNA ligase, NAD-dependent [Escherichia coli H736] gi|301073835|gb|EFK88641.1| DNA ligase, NAD-dependent [Escherichia coli MS 146-1] gi|331039830|gb|EGI12050.1| DNA ligase, NAD-dependent [Escherichia coli H736] Length = 671 Score = 40.8 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|215487666|ref|YP_002330097.1| NAD-dependent DNA ligase LigA [Escherichia coli O127:H6 str. E2348/69] gi|312967700|ref|ZP_07781915.1| DNA ligase, NAD-dependent [Escherichia coli 2362-75] gi|254781317|sp|B7UGB2|DNLJ_ECO27 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|215265738|emb|CAS10145.1| DNA ligase, NAD(+)-dependent [Escherichia coli O127:H6 str. E2348/69] gi|312287897|gb|EFR15802.1| DNA ligase, NAD-dependent [Escherichia coli 2362-75] Length = 671 Score = 40.8 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|82777805|ref|YP_404154.1| NAD-dependent DNA ligase LigA [Shigella dysenteriae Sd197] gi|309784866|ref|ZP_07679499.1| DNA ligase, NAD-dependent [Shigella dysenteriae 1617] gi|123728534|sp|Q32DE2|DNLJ_SHIDS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|81241953|gb|ABB62663.1| DNA ligase [Shigella dysenteriae Sd197] gi|308927236|gb|EFP72710.1| DNA ligase, NAD-dependent [Shigella dysenteriae 1617] Length = 671 Score = 40.8 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|187477571|ref|YP_785595.1| DNA ligase [Bordetella avium 197N] gi|123752160|sp|Q2KUU5|DNLJ_BORA1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|115422157|emb|CAJ48681.1| DNA ligase [Bordetella avium 197N] Length = 695 Score = 40.8 bits (94), Expect = 0.058, Method: Composition-based stats. Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 68 KIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +IA H+ + YY D+P TD YD + L AL+ Q PEL D P VG Sbjct: 18 EIAQHNIR-YYVYDEPSITDADYDALMRELMALEAQHPELVTPDSPTQRVG 67 >gi|330912204|gb|EGH40714.1| DNA ligase [Escherichia coli AA86] Length = 671 Score = 40.8 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|323170330|gb|EFZ55983.1| DNA ligase, NAD-dependent [Escherichia coli LT-68] Length = 671 Score = 40.8 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|300923365|ref|ZP_07139409.1| DNA ligase, NAD-dependent [Escherichia coli MS 182-1] gi|300420362|gb|EFK03673.1| DNA ligase, NAD-dependent [Escherichia coli MS 182-1] Length = 671 Score = 40.8 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|322418721|ref|YP_004197944.1| NAD-dependent DNA ligase [Geobacter sp. M18] gi|320125108|gb|ADW12668.1| DNA ligase, NAD-dependent [Geobacter sp. M18] Length = 668 Score = 40.8 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + +L K H + YY D P TD YD + L L+++FPEL D P VG Sbjct: 10 IAWLSKEIERHNRLYYEQDMPEITDAEYDALFRELQELEKKFPELALPDSPTGRVG 65 >gi|170767420|ref|ZP_02901873.1| DNA ligase, NAD-dependent [Escherichia albertii TW07627] gi|170123754|gb|EDS92685.1| DNA ligase, NAD-dependent [Escherichia albertii TW07627] Length = 671 Score = 40.8 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAKHPELITPDSPTQRVG 63 >gi|146615|gb|AAA24071.1| lig peptide [Escherichia coli] Length = 671 Score = 40.8 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|15802944|ref|NP_288973.1| NAD-dependent DNA ligase LigA [Escherichia coli O157:H7 EDL933] gi|12516784|gb|AAG57530.1|AE005471_7 DNA ligase [Escherichia coli O157:H7 str. EDL933] Length = 671 Score = 40.8 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|320185101|gb|EFW59881.1| DNA ligase [Shigella flexneri CDC 796-83] Length = 671 Score = 40.8 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|315127017|ref|YP_004069020.1| NAD-dependent DNA ligase [Pseudoalteromonas sp. SM9913] gi|315015531|gb|ADT68869.1| NAD-dependent DNA ligase [Pseudoalteromonas sp. SM9913] Length = 673 Score = 40.8 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 25/57 (43%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +L H YY LD P D YDR+ L L+ Q PE D P VG Sbjct: 8 QINHLRTTLEQHNYSYYVLDTPSIPDAEYDRLLRTLSELETQHPEFLTADSPTQKVG 64 >gi|331648073|ref|ZP_08349163.1| DNA ligase, NAD-dependent [Escherichia coli M605] gi|331042933|gb|EGI15073.1| DNA ligase, NAD-dependent [Escherichia coli M605] Length = 671 Score = 40.8 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|110833810|ref|YP_692669.1| NAD-dependent DNA ligase LigA [Alcanivorax borkumensis SK2] gi|123345666|sp|Q0VR01|DNLJ_ALCBS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|110646921|emb|CAL16397.1| DNA ligase (NAD+) [Alcanivorax borkumensis SK2] Length = 777 Score = 40.8 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY DDP D YDRV L L+ Q+P+L D P VG Sbjct: 25 YYVQDDPAVPDAEYDRVFRALKDLEAQYPDLVTADSPTQRVG 66 >gi|74312947|ref|YP_311366.1| NAD-dependent DNA ligase LigA [Shigella sonnei Ss046] gi|123732314|sp|Q3YZD1|DNLJ_SHISS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|73856424|gb|AAZ89131.1| DNA ligase [Shigella sonnei Ss046] gi|323169148|gb|EFZ54825.1| DNA ligase, NAD-dependent [Shigella sonnei 53G] Length = 671 Score = 40.8 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|209764254|gb|ACI80439.1| DNA ligase [Escherichia coli] Length = 671 Score = 40.8 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|323341293|ref|ZP_08081538.1| NAD-dependent DNA ligase LigA [Lactobacillus ruminis ATCC 25644] gi|323091287|gb|EFZ33914.1| NAD-dependent DNA ligase LigA [Lactobacillus ruminis ATCC 25644] Length = 671 Score = 40.8 bits (94), Expect = 0.060, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 34/65 (52%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K EA E+E L + + YY LD P D +YD +RL L+ +FPEL +D P Sbjct: 1 MDKEEAKKELESLREKLTKWSREYYVLDAPTVEDHVYDENYKRLLELEAKFPELVTKDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|78223924|ref|YP_385671.1| NAD-dependent DNA ligase C4-type [Geobacter metallireducens GS-15] gi|123756373|sp|Q39S28|DNLJ_GEOMG RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|78195179|gb|ABB32946.1| NAD-dependent DNA ligase C4-type [Geobacter metallireducens GS-15] Length = 671 Score = 40.8 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P TD YD + L L+E+ PEL D P VG Sbjct: 20 HDHLYYVLDRPELTDAEYDALYRELLKLEEEHPELVTPDSPSRRVG 65 >gi|110642595|ref|YP_670325.1| NAD-dependent DNA ligase LigA [Escherichia coli 536] gi|191174600|ref|ZP_03036093.1| DNA ligase, NAD-dependent [Escherichia coli F11] gi|300997757|ref|ZP_07181842.1| DNA ligase, NAD-dependent [Escherichia coli MS 200-1] gi|306814500|ref|ZP_07448662.1| NAD-dependent DNA ligase LigA [Escherichia coli NC101] gi|122958158|sp|Q0TF55|DNLJ_ECOL5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|110344187|gb|ABG70424.1| DNA ligase [Escherichia coli 536] gi|190905126|gb|EDV64772.1| DNA ligase, NAD-dependent [Escherichia coli F11] gi|222034142|emb|CAP76883.1| DNA ligase [Escherichia coli LF82] gi|300304141|gb|EFJ58661.1| DNA ligase, NAD-dependent [Escherichia coli MS 200-1] gi|305851894|gb|EFM52346.1| NAD-dependent DNA ligase LigA [Escherichia coli NC101] gi|312947007|gb|ADR27834.1| NAD-dependent DNA ligase LigA [Escherichia coli O83:H1 str. NRG 857C] gi|324011127|gb|EGB80346.1| DNA ligase, NAD-dependent [Escherichia coli MS 60-1] Length = 671 Score = 40.8 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|319937197|ref|ZP_08011604.1| DNA ligase [Coprobacillus sp. 29_1] gi|319807563|gb|EFW04156.1| DNA ligase [Coprobacillus sp. 29_1] Length = 662 Score = 40.8 bits (94), Expect = 0.060, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E +IE++ L+ + YY LD+P +D YDR+ + L A++ Q PE D P V Sbjct: 4 ERLIEIKKLLN---EYNYQYYVLDNPSVSDQEYDRLMQELQAIENQHPEWLTADSPSQRV 60 Query: 118 G 118 G Sbjct: 61 G 61 >gi|90410985|ref|ZP_01218999.1| DNA ligase [Photobacterium profundum 3TCK] gi|90328198|gb|EAS44509.1| DNA ligase [Photobacterium profundum 3TCK] Length = 697 Score = 40.8 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 38/82 (46%) Query: 37 NKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSER 96 N + S L K V S + +++ L + +H YY D+P D YDR+ ++ Sbjct: 9 NGKPKRSILTKTVLVGSEMSTDIQQQLDTLREQLAYHGHRYYVEDNPEIPDAEYDRMMQQ 68 Query: 97 LDALQEQFPELFDEDHPWNTVG 118 L AL+ PEL D P VG Sbjct: 69 LLALEADHPELMSVDSPSQRVG 90 >gi|26248787|ref|NP_754827.1| NAD-dependent DNA ligase LigA [Escherichia coli CFT073] gi|170680446|ref|YP_001744602.1| NAD-dependent DNA ligase LigA [Escherichia coli SMS-3-5] gi|227887457|ref|ZP_04005262.1| NAD-dependent DNA ligase LigA [Escherichia coli 83972] gi|300981618|ref|ZP_07175608.1| DNA ligase, NAD-dependent [Escherichia coli MS 45-1] gi|301046300|ref|ZP_07193464.1| DNA ligase, NAD-dependent [Escherichia coli MS 185-1] gi|81475373|sp|Q8FFC1|DNLJ_ECOL6 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781328|sp|B1LMK5|DNLJ_ECOSM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|26109193|gb|AAN81395.1|AE016764_77 DNA ligase [Escherichia coli CFT073] gi|170518164|gb|ACB16342.1| DNA ligase, NAD-dependent [Escherichia coli SMS-3-5] gi|227835807|gb|EEJ46273.1| NAD-dependent DNA ligase LigA [Escherichia coli 83972] gi|300301715|gb|EFJ58100.1| DNA ligase, NAD-dependent [Escherichia coli MS 185-1] gi|300408962|gb|EFJ92500.1| DNA ligase, NAD-dependent [Escherichia coli MS 45-1] gi|307554453|gb|ADN47228.1| DNA ligase [Escherichia coli ABU 83972] gi|315293473|gb|EFU52825.1| DNA ligase, NAD-dependent [Escherichia coli MS 153-1] gi|323977408|gb|EGB72494.1| DNA ligase [Escherichia coli TW10509] Length = 671 Score = 40.8 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|15832537|ref|NP_311310.1| NAD-dependent DNA ligase LigA [Escherichia coli O157:H7 str. Sakai] gi|168768500|ref|ZP_02793507.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. EC4486] gi|168778374|ref|ZP_02803381.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. EC4076] gi|208813694|ref|ZP_03255023.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. EC4045] gi|208821178|ref|ZP_03261498.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. EC4042] gi|209399429|ref|YP_002271890.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. EC4115] gi|217326968|ref|ZP_03443051.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. TW14588] gi|254794365|ref|YP_003079202.1| NAD-dependent DNA ligase LigA [Escherichia coli O157:H7 str. TW14359] gi|261223146|ref|ZP_05937427.1| DNA ligase, NAD(+)-dependent [Escherichia coli O157:H7 str. FRIK2000] gi|261259301|ref|ZP_05951834.1| DNA ligase, NAD(+)-dependent [Escherichia coli O157:H7 str. FRIK966] gi|291283640|ref|YP_003500458.1| DNA ligase [Escherichia coli O55:H7 str. CB9615] gi|166215595|sp|Q8XBL5|DNLJ_ECO57 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781320|sp|B5YZV8|DNLJ_ECO5E RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|13362753|dbj|BAB36706.1| DNA ligase [Escherichia coli O157:H7 str. Sakai] gi|189003243|gb|EDU72229.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. EC4076] gi|189362250|gb|EDU80669.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. EC4486] gi|208734971|gb|EDZ83658.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. EC4045] gi|208741301|gb|EDZ88983.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. EC4042] gi|209160829|gb|ACI38262.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. EC4115] gi|209764248|gb|ACI80436.1| DNA ligase [Escherichia coli] gi|209764250|gb|ACI80437.1| DNA ligase [Escherichia coli] gi|209764252|gb|ACI80438.1| DNA ligase [Escherichia coli] gi|209764256|gb|ACI80440.1| DNA ligase [Escherichia coli] gi|217319335|gb|EEC27760.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. TW14588] gi|254593765|gb|ACT73126.1| DNA ligase, NAD(+)-dependent [Escherichia coli O157:H7 str. TW14359] gi|290763513|gb|ADD57474.1| DNA ligase [Escherichia coli O55:H7 str. CB9615] gi|320188751|gb|EFW63410.1| DNA ligase [Escherichia coli O157:H7 str. EC1212] gi|320640925|gb|EFX10409.1| NAD-dependent DNA ligase LigA [Escherichia coli O157:H7 str. G5101] gi|320646206|gb|EFX15133.1| NAD-dependent DNA ligase LigA [Escherichia coli O157:H- str. 493-89] gi|320651712|gb|EFX20092.1| NAD-dependent DNA ligase LigA [Escherichia coli O157:H- str. H 2687] gi|320657097|gb|EFX24906.1| NAD-dependent DNA ligase LigA [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662857|gb|EFX30185.1| NAD-dependent DNA ligase LigA [Escherichia coli O55:H7 str. USDA 5905] gi|320667743|gb|EFX34654.1| NAD-dependent DNA ligase LigA [Escherichia coli O157:H7 str. LSU-61] gi|326340214|gb|EGD64018.1| DNA ligase [Escherichia coli O157:H7 str. 1125] gi|326344216|gb|EGD67977.1| DNA ligase [Escherichia coli O157:H7 str. 1044] Length = 671 Score = 40.8 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|157156100|ref|YP_001463741.1| NAD-dependent DNA ligase LigA [Escherichia coli E24377A] gi|193066723|ref|ZP_03047750.1| DNA ligase, NAD-dependent [Escherichia coli E22] gi|194430461|ref|ZP_03062941.1| DNA ligase, NAD-dependent [Escherichia coli B171] gi|209919893|ref|YP_002293977.1| NAD-dependent DNA ligase LigA [Escherichia coli SE11] gi|218554944|ref|YP_002387857.1| NAD-dependent DNA ligase LigA [Escherichia coli IAI1] gi|218696047|ref|YP_002403714.1| NAD-dependent DNA ligase LigA [Escherichia coli 55989] gi|256017438|ref|ZP_05431303.1| NAD-dependent DNA ligase LigA [Shigella sp. D9] gi|260845052|ref|YP_003222830.1| DNA ligase LigA, NAD(+)-dependent [Escherichia coli O103:H2 str. 12009] gi|260856513|ref|YP_003230404.1| DNA ligase LigA, NAD(+)-dependent [Escherichia coli O26:H11 str. 11368] gi|260869108|ref|YP_003235510.1| DNA ligase LigA, NAD(+)-dependent [Escherichia coli O111:H- str. 11128] gi|293446772|ref|ZP_06663194.1| DNA ligase [Escherichia coli B088] gi|300817349|ref|ZP_07097566.1| DNA ligase, NAD-dependent [Escherichia coli MS 107-1] gi|300820921|ref|ZP_07101071.1| DNA ligase, NAD-dependent [Escherichia coli MS 119-7] gi|300903139|ref|ZP_07121073.1| DNA ligase, NAD-dependent [Escherichia coli MS 84-1] gi|300921341|ref|ZP_07137704.1| DNA ligase, NAD-dependent [Escherichia coli MS 115-1] gi|301306250|ref|ZP_07212323.1| DNA ligase, NAD-dependent [Escherichia coli MS 124-1] gi|301328910|ref|ZP_07221944.1| DNA ligase, NAD-dependent [Escherichia coli MS 78-1] gi|307312589|ref|ZP_07592222.1| DNA ligase, NAD-dependent [Escherichia coli W] gi|309794543|ref|ZP_07688966.1| DNA ligase, NAD-dependent [Escherichia coli MS 145-7] gi|331669152|ref|ZP_08370000.1| DNA ligase, NAD-dependent [Escherichia coli TA271] gi|331678399|ref|ZP_08379074.1| DNA ligase, NAD-dependent [Escherichia coli H591] gi|190359253|sp|A7ZPL2|DNLJ_ECO24 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781319|sp|B7LCF6|DNLJ_ECO55 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781323|sp|B7M6S1|DNLJ_ECO8A RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781327|sp|B6I4Y8|DNLJ_ECOSE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157078130|gb|ABV17838.1| DNA ligase, NAD-dependent [Escherichia coli E24377A] gi|192925627|gb|EDV80294.1| DNA ligase, NAD-dependent [Escherichia coli E22] gi|194411494|gb|EDX27836.1| DNA ligase, NAD-dependent [Escherichia coli B171] gi|209913152|dbj|BAG78226.1| DNA ligase [Escherichia coli SE11] gi|218352779|emb|CAU98567.1| DNA ligase, NAD(+)-dependent [Escherichia coli 55989] gi|218361712|emb|CAQ99309.1| DNA ligase, NAD(+)-dependent [Escherichia coli IAI1] gi|257755162|dbj|BAI26664.1| DNA ligase LigA, NAD(+)-dependent [Escherichia coli O26:H11 str. 11368] gi|257760199|dbj|BAI31696.1| DNA ligase LigA, NAD(+)-dependent [Escherichia coli O103:H2 str. 12009] gi|257765464|dbj|BAI36959.1| DNA ligase LigA, NAD(+)-dependent [Escherichia coli O111:H- str. 11128] gi|291323602|gb|EFE63030.1| DNA ligase [Escherichia coli B088] gi|300404835|gb|EFJ88373.1| DNA ligase, NAD-dependent [Escherichia coli MS 84-1] gi|300411729|gb|EFJ95039.1| DNA ligase, NAD-dependent [Escherichia coli MS 115-1] gi|300526674|gb|EFK47743.1| DNA ligase, NAD-dependent [Escherichia coli MS 119-7] gi|300529975|gb|EFK51037.1| DNA ligase, NAD-dependent [Escherichia coli MS 107-1] gi|300838493|gb|EFK66253.1| DNA ligase, NAD-dependent [Escherichia coli MS 124-1] gi|300844712|gb|EFK72472.1| DNA ligase, NAD-dependent [Escherichia coli MS 78-1] gi|306907512|gb|EFN38016.1| DNA ligase, NAD-dependent [Escherichia coli W] gi|308121999|gb|EFO59261.1| DNA ligase, NAD-dependent [Escherichia coli MS 145-7] gi|315061736|gb|ADT76063.1| DNA ligase, NAD(+)-dependent [Escherichia coli W] gi|315256427|gb|EFU36395.1| DNA ligase, NAD-dependent [Escherichia coli MS 85-1] gi|320199974|gb|EFW74563.1| DNA ligase [Escherichia coli EC4100B] gi|323156318|gb|EFZ42476.1| DNA ligase, NAD-dependent [Escherichia coli EPECa14] gi|323159458|gb|EFZ45441.1| DNA ligase, NAD-dependent [Escherichia coli E128010] gi|323177463|gb|EFZ63051.1| DNA ligase, NAD-dependent [Escherichia coli 1180] gi|323184284|gb|EFZ69660.1| DNA ligase, NAD-dependent [Escherichia coli 1357] gi|323377683|gb|ADX49951.1| DNA ligase, NAD-dependent [Escherichia coli KO11] gi|323944634|gb|EGB40701.1| DNA ligase [Escherichia coli H120] gi|324020175|gb|EGB89394.1| DNA ligase, NAD-dependent [Escherichia coli MS 117-3] gi|324118125|gb|EGC12023.1| DNA ligase [Escherichia coli E1167] gi|331064346|gb|EGI36257.1| DNA ligase, NAD-dependent [Escherichia coli TA271] gi|331074859|gb|EGI46179.1| DNA ligase, NAD-dependent [Escherichia coli H591] gi|332100791|gb|EGJ04137.1| NAD-dependent DNA ligase LigA [Shigella sp. D9] Length = 671 Score = 40.8 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|325962711|ref|YP_004240617.1| DNA ligase, NAD-dependent [Arthrobacter phenanthrenivorans Sphe3] gi|323468798|gb|ADX72483.1| DNA ligase, NAD-dependent [Arthrobacter phenanthrenivorans Sphe3] Length = 767 Score = 40.8 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E E LV + ++ YY+ D PL +D +D + RL+ ++ PEL D P VG Sbjct: 32 EYENLVDLVRKYRFAYYQEDAPLVSDAEFDELFRRLEEIEALHPELVSNDSPTQEVG 88 >gi|327480472|gb|AEA83782.1| NAD-dependent DNA ligase LigA [Pseudomonas stutzeri DSM 4166] Length = 791 Score = 40.8 bits (94), Expect = 0.062, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P D YDR+ L AL+ + PEL + P VG Sbjct: 21 HNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPELVTPESPTQRVG 66 >gi|166216289|sp|A4VKN0|DNLJ_PSEU5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 788 Score = 40.8 bits (94), Expect = 0.062, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P D YDR+ L AL+ + PEL + P VG Sbjct: 21 HNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPELVTPESPTQRVG 66 >gi|159044058|ref|YP_001532852.1| DNA ligase [Dinoroseobacter shibae DFL 12] gi|190359252|sp|A8LK52|DNLJ_DINSH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157911818|gb|ABV93251.1| DNA ligase [Dinoroseobacter shibae DFL 12] Length = 741 Score = 40.8 bits (94), Expect = 0.062, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 37/73 (50%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D V +LS+ A E+ L ++ Y+R D P +D YD + +R A++ +FP Sbjct: 37 DTYVAVEALSEAAARKELARLSELLARANAEYHRDDAPSLSDADYDALKQRNAAIEARFP 96 Query: 106 ELFDEDHPWNTVG 118 +L D P + VG Sbjct: 97 DLKRGDSPSDQVG 109 >gi|86742328|ref|YP_482728.1| DNA ligase, NAD-dependent [Frankia sp. CcI3] gi|123750794|sp|Q2J6U3|DNLJ_FRASC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|86569190|gb|ABD12999.1| DNA ligase, NAD-dependent [Frankia sp. CcI3] Length = 706 Score = 40.8 bits (94), Expect = 0.062, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P +D YDR+ L AL+E+ P+L D P V Sbjct: 36 HAYRYYVLDSPTISDAEYDRLMAELAALEERHPDLRTPDSPTQKVA 81 >gi|294631529|ref|ZP_06710089.1| DNA ligase, NAD-dependent [Streptomyces sp. e14] gi|292834862|gb|EFF93211.1| DNA ligase, NAD-dependent [Streptomyces sp. e14] Length = 732 Score = 40.8 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 32/62 (51%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 EA E L + H+ YY D P+ +D +DR+ L+AL+E++PEL D P Sbjct: 3 AEAREEHARLAEQVEEHRFRYYVKDAPVISDADFDRLLRSLEALEERYPELRTPDSPTQK 62 Query: 117 VG 118 V Sbjct: 63 VA 64 >gi|146282220|ref|YP_001172373.1| NAD-dependent DNA ligase LigA [Pseudomonas stutzeri A1501] gi|145570425|gb|ABP79531.1| DNA ligase, NAD-dependent [Pseudomonas stutzeri A1501] Length = 802 Score = 40.8 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P D YDR+ L AL+ + PEL + P VG Sbjct: 35 HNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPELVTPESPTQRVG 80 >gi|226226196|ref|YP_002760302.1| NAD(+)-dependent DNA ligase [Gemmatimonas aurantiaca T-27] gi|254781336|sp|C1A6H2|DNLJ_GEMAT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|226089387|dbj|BAH37832.1| NAD(+)-dependent DNA ligase [Gemmatimonas aurantiaca T-27] Length = 689 Score = 40.8 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 24/45 (53%) Query: 74 QKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Q YY LD P +D YDR+ L ++ ++P L ED P VG Sbjct: 27 QHEYYVLDRPTLSDQEYDRLFRELQGIEAEYPTLCTEDSPTRRVG 71 >gi|171059186|ref|YP_001791535.1| DNA ligase, NAD-dependent [Leptothrix cholodnii SP-6] gi|254781357|sp|B1Y6D4|DNLJ_LEPCP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|170776631|gb|ACB34770.1| DNA ligase, NAD-dependent [Leptothrix cholodnii SP-6] Length = 768 Score = 40.8 bits (94), Expect = 0.064, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 23/46 (50%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 HH YY LD P D YDR+ + L A++ +P L D P V Sbjct: 47 HHAHLYYVLDAPELPDAEYDRLFQELQAIEAMYPALRTADSPTQRV 92 >gi|270262950|ref|ZP_06191221.1| DNA ligase, NAD-dependent [Serratia odorifera 4Rx13] gi|270043634|gb|EFA16727.1| DNA ligase, NAD-dependent [Serratia odorifera 4Rx13] Length = 673 Score = 40.8 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ L L+ PEL D P VG Sbjct: 17 HHEYQYHVLDAPEVPDAEYDRLMNELRELENAHPELITADSPTQRVG 63 >gi|237733138|ref|ZP_04563619.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229383820|gb|EEO33911.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 664 Score = 40.8 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 25/48 (52%) Query: 71 LHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L+H YY D+P TD YD + + L L+++ PE D P VG Sbjct: 15 LYHNDRYYNQDNPEITDYEYDMMMQELKGLEQKHPEYITSDSPTQKVG 62 >gi|288572809|ref|ZP_06391166.1| DNA ligase, NAD-dependent [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568550|gb|EFC90107.1| DNA ligase, NAD-dependent [Dethiosulfovibrio peptidovorans DSM 11002] Length = 674 Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 26/55 (47%) Query: 64 EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L K H + YY LD P D YDR+ L L+ + P L +D P VG Sbjct: 11 ESLKKEIARHDRLYYVLDSPEIDDSSYDRMMRELLELEREHPTLVSDDSPSRRVG 65 >gi|34499358|ref|NP_903573.1| DNA ligase [Chromobacterium violaceum ATCC 12472] gi|81654398|sp|Q7NR81|DNLJ_CHRVO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|34105208|gb|AAQ61564.1| DNA ligase [Chromobacterium violaceum ATCC 12472] Length = 821 Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 20/42 (47%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L AL+E PEL D P VG Sbjct: 40 YYVLDAPTVPDAEYDRLFRELQALEEAHPELAVSDSPTRRVG 81 >gi|325274411|ref|ZP_08140498.1| NAD-dependent DNA ligase LigA [Pseudomonas sp. TJI-51] gi|324100446|gb|EGB98205.1| NAD-dependent DNA ligase LigA [Pseudomonas sp. TJI-51] Length = 776 Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P D YDR+ L AL+ + P L D P VG Sbjct: 16 QHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPHLVTPDSPTQRVG 62 >gi|313497885|gb|ADR59251.1| LigA [Pseudomonas putida BIRD-1] Length = 776 Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P D YDR+ L AL+ + P L D P VG Sbjct: 16 QHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPHLVTPDSPTQRVG 62 >gi|257060505|ref|YP_003138393.1| DNA ligase, NAD-dependent [Cyanothece sp. PCC 8802] gi|256590671|gb|ACV01558.1| DNA ligase, NAD-dependent [Cyanothece sp. PCC 8802] Length = 674 Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+P+ D +YD++ L L+ Q+P L D P VG Sbjct: 26 YYVLDNPIMEDSVYDQLYRELQDLESQYPILITPDSPTQRVG 67 >gi|148546832|ref|YP_001266934.1| NAD-dependent DNA ligase LigA [Pseudomonas putida F1] gi|190359274|sp|A5W0U0|DNLJ_PSEP1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|148510890|gb|ABQ77750.1| DNA ligase, NAD-dependent [Pseudomonas putida F1] Length = 776 Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P D YDR+ L AL+ + P L D P VG Sbjct: 16 QHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPHLVTPDSPTQRVG 62 >gi|167034833|ref|YP_001670064.1| NAD-dependent DNA ligase LigA [Pseudomonas putida GB-1] gi|190359275|sp|B0KPX3|DNLJ_PSEPG RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166861321|gb|ABY99728.1| DNA ligase, NAD-dependent [Pseudomonas putida GB-1] Length = 776 Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P D YDR+ L AL+ + P L D P VG Sbjct: 16 QHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPHLVTPDSPTQRVG 62 >gi|170722763|ref|YP_001750451.1| NAD-dependent DNA ligase LigA [Pseudomonas putida W619] gi|254781396|sp|B1JC06|DNLJ_PSEPW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|169760766|gb|ACA74082.1| DNA ligase, NAD-dependent [Pseudomonas putida W619] Length = 776 Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P D YDR+ L AL+ + P L D P VG Sbjct: 16 QHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPHLVTPDSPTQRVG 62 >gi|26990965|ref|NP_746390.1| NAD-dependent DNA ligase LigA [Pseudomonas putida KT2440] gi|81439923|sp|Q88F25|DNLJ_PSEPK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|24985989|gb|AAN69854.1|AE016624_5 DNA ligase, NAD-dependent [Pseudomonas putida KT2440] Length = 776 Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P D YDR+ L AL+ + P L D P VG Sbjct: 16 QHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPHLVTPDSPTQRVG 62 >gi|167756540|ref|ZP_02428667.1| hypothetical protein CLORAM_02077 [Clostridium ramosum DSM 1402] gi|167702715|gb|EDS17294.1| hypothetical protein CLORAM_02077 [Clostridium ramosum DSM 1402] Length = 664 Score = 40.8 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 25/48 (52%) Query: 71 LHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L+H YY D+P TD YD + + L L+++ PE D P VG Sbjct: 15 LYHNDRYYNQDNPEITDYEYDMMMQELKGLEQKHPEYITSDSPTQKVG 62 >gi|54308062|ref|YP_129082.1| NAD-dependent DNA ligase LigA [Photobacterium profundum SS9] gi|81615410|sp|Q6LTU5|DNLJ_PHOPR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|46912488|emb|CAG19280.1| putative NAD-dependent DNA ligase [Photobacterium profundum SS9] Length = 676 Score = 40.8 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY D+P D YDR+ ++L AL+ + PEL D P VG Sbjct: 23 YHGHRYYVEDNPEIPDAEYDRMMQQLLALEAEHPELMSVDSPSQRVG 69 >gi|218248171|ref|YP_002373542.1| NAD-dependent DNA ligase [Cyanothece sp. PCC 8801] gi|254781307|sp|B7K0A2|DNLJ_CYAP8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218168649|gb|ACK67386.1| DNA ligase, NAD-dependent [Cyanothece sp. PCC 8801] Length = 674 Score = 40.8 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+P+ D +YD++ L L+ Q+P L D P VG Sbjct: 26 YYVLDNPIMEDSVYDQLYRELQDLESQYPILITPDSPTQRVG 67 >gi|260769097|ref|ZP_05878031.1| DNA ligase [Vibrio furnissii CIP 102972] gi|260617127|gb|EEX42312.1| DNA ligase [Vibrio furnissii CIP 102972] Length = 669 Score = 40.8 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 67 VKIALH-HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +K LH H YY DDP D YDR+ L L+ Q PEL D P VG Sbjct: 11 LKDTLHYHAIRYYVEDDPTIPDAEYDRLMRELLDLEAQHPELVTPDSPSQRVG 63 >gi|122879187|ref|YP_201049.6| NAD-dependent DNA ligase LigA [Xanthomonas oryzae pv. oryzae KACC10331] gi|166216280|sp|Q5H057|DNLJ_XANOR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 841 Score = 40.8 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY L DP TD YD++ L L++++PEL D P VG Sbjct: 23 YYDLADPEITDAQYDQLFRELQELEQKYPELVTADSPSMRVG 64 >gi|118594798|ref|ZP_01552145.1| DNA ligase, NAD-dependent [Methylophilales bacterium HTCC2181] gi|118440576|gb|EAV47203.1| DNA ligase, NAD-dependent [Methylophilales bacterium HTCC2181] Length = 671 Score = 40.8 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 29/53 (54%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L K+ H YY LD+PL +D +D++ + A+++ PEL D P VG Sbjct: 14 LKKLISEHNYHYYVLDNPLISDAEFDKIFLEIKAIEDLNPELITIDSPTQRVG 66 >gi|108798849|ref|YP_639046.1| NAD-dependent DNA ligase LigA [Mycobacterium sp. MCS] gi|119867964|ref|YP_937916.1| NAD-dependent DNA ligase LigA [Mycobacterium sp. KMS] gi|126434449|ref|YP_001070140.1| NAD-dependent DNA ligase LigA [Mycobacterium sp. JLS] gi|123369452|sp|Q1BAU4|DNLJ_MYCSS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166216212|sp|A3PXM2|DNLJ_MYCSJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166216213|sp|A1UE68|DNLJ_MYCSK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|108769268|gb|ABG07990.1| DNA ligase, NAD-dependent [Mycobacterium sp. MCS] gi|119694053|gb|ABL91126.1| DNA ligase, NAD-dependent [Mycobacterium sp. KMS] gi|126234249|gb|ABN97649.1| DNA ligase, NAD-dependent [Mycobacterium sp. JLS] Length = 701 Score = 40.8 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 28/46 (60%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ +D +D++ ++L+AL+ + PEL D P VG Sbjct: 36 HQFRYYVRDAPVISDADFDKLFQQLEALEAEHPELRAPDSPTQLVG 81 >gi|84623945|ref|YP_451317.1| NAD-dependent DNA ligase LigA [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|123752764|sp|Q2P334|DNLJ_XANOM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|84367885|dbj|BAE69043.1| DNA ligase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 841 Score = 40.8 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY L DP TD YD++ L L++++PEL D P VG Sbjct: 23 YYDLADPEITDAQYDQLFRELQELEQKYPELVTADSPSMRVG 64 >gi|254556107|ref|YP_003062524.1| DNA ligase (NAD+) [Lactobacillus plantarum JDM1] gi|300766626|ref|ZP_07076543.1| NAD-dependent DNA ligase LigA [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180104|ref|YP_003924232.1| DNA ligase (NAD+) [Lactobacillus plantarum subsp. plantarum ST-III] gi|254045034|gb|ACT61827.1| DNA ligase (NAD+) [Lactobacillus plantarum JDM1] gi|300495726|gb|EFK30877.1| NAD-dependent DNA ligase LigA [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045595|gb|ADN98138.1| DNA ligase (NAD+) [Lactobacillus plantarum subsp. plantarum ST-III] Length = 679 Score = 40.8 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 35/71 (49%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 A K +++ +A E L + ++ YY D P D +YD+ ERL L++ FP+L Sbjct: 2 ADKPNTMTVEQAADEAAALRQTLNEWRRQYYDEDAPNVEDSVYDQKYERLVELEQTFPQL 61 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 62 VTPDSPTQLVG 72 >gi|166216286|sp|A0KVI4|DNLJ_SHESA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 689 Score = 40.8 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D P TD YDR+ +RL L+ ++P+ D P VG Sbjct: 37 HNIRYYVDDAPSITDSEYDRLMQRLKQLEAEYPQFVAADSPTQRVG 82 >gi|28377923|ref|NP_784815.1| DNA ligase (NAD+) [Lactobacillus plantarum WCFS1] gi|81631729|sp|Q88XQ0|DNLJ_LACPL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|28270757|emb|CAD63662.1| DNA ligase (NAD+) [Lactobacillus plantarum WCFS1] Length = 679 Score = 40.8 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 35/71 (49%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 A K +++ +A E L + ++ YY D P D +YD+ ERL L++ FP+L Sbjct: 2 ADKPNTMTVEQAADEAAALRQTLNEWRRQYYDEDAPNVEDSVYDQKYERLVELEQTFPQL 61 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 62 VTPDSPTQLVG 72 >gi|117920017|ref|YP_869209.1| DNA ligase, NAD-dependent [Shewanella sp. ANA-3] gi|117612349|gb|ABK47803.1| DNA ligase, NAD-dependent [Shewanella sp. ANA-3] Length = 691 Score = 40.8 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D P TD YDR+ +RL L+ ++P+ D P VG Sbjct: 39 HNIRYYVDDAPSITDSEYDRLMQRLKQLEAEYPQFVAADSPTQRVG 84 >gi|322652148|gb|EFY48510.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] Length = 571 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|322613832|gb|EFY10771.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617441|gb|EFY14340.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624929|gb|EFY21758.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629628|gb|EFY26404.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633942|gb|EFY30679.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635621|gb|EFY32332.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639981|gb|EFY36651.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644326|gb|EFY40867.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322655311|gb|EFY51620.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658357|gb|EFY54623.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664357|gb|EFY60554.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668412|gb|EFY64568.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673252|gb|EFY69358.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676644|gb|EFY72712.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683394|gb|EFY79408.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685720|gb|EFY81713.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192602|gb|EFZ77831.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196835|gb|EFZ81978.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202141|gb|EFZ87199.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208024|gb|EFZ92969.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212850|gb|EFZ97659.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217119|gb|EGA01841.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219619|gb|EGA04102.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323229192|gb|EGA13316.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235493|gb|EGA19577.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237321|gb|EGA21384.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245552|gb|EGA29550.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248968|gb|EGA32891.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253065|gb|EGA36897.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255865|gb|EGA39610.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261411|gb|EGA44996.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266454|gb|EGA49942.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269716|gb|EGA53166.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|238912842|ref|ZP_04656679.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|224583040|ref|YP_002636838.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254781413|sp|C0PZB4|DNLJ_SALPC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|224467567|gb|ACN45397.1| DNA ligase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|207857840|ref|YP_002244491.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|254781409|sp|B5R3V4|DNLJ_SALEP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|206709643|emb|CAR33993.1| DNA ligase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|205353534|ref|YP_002227335.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|254781410|sp|B5RCP9|DNLJ_SALG2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|205273315|emb|CAR38285.1| DNA ligase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628629|gb|EGE34972.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|168817829|ref|ZP_02829829.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205345161|gb|EDZ31925.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086917|emb|CBY96687.1| DNA ligase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|200388789|ref|ZP_03215401.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605887|gb|EDZ04432.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|168466836|ref|ZP_02700690.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195630762|gb|EDX49354.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|168261543|ref|ZP_02683516.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205349337|gb|EDZ35968.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|194444893|ref|YP_002041687.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|254781412|sp|B4SZU5|DNLJ_SALNS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|194403556|gb|ACF63778.1| DNA ligase [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|168243193|ref|ZP_02668125.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194449589|ref|YP_002046491.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|254781411|sp|B4TCF6|DNLJ_SALHS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|194407893|gb|ACF68112.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205337689|gb|EDZ24453.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|204929538|ref|ZP_03220612.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321257|gb|EDZ06457.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|197247622|ref|YP_002147380.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|254781407|sp|B5F0F5|DNLJ_SALA4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|197211325|gb|ACH48722.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|168238909|ref|ZP_02663967.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734182|ref|YP_002115493.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|254781415|sp|B4TQF8|DNLJ_SALSV RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|194709684|gb|ACF88905.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288317|gb|EDY27698.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|168231967|ref|ZP_02657025.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194471791|ref|ZP_03077775.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194458155|gb|EDX46994.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333574|gb|EDZ20338.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|198243638|ref|YP_002216496.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|254781408|sp|B5FQB9|DNLJ_SALDC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|197938154|gb|ACH75487.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326624250|gb|EGE30595.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|167549563|ref|ZP_02343322.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325268|gb|EDZ13107.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|161612830|ref|YP_001586795.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|190359282|sp|A9N362|DNLJ_SALPB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|161362194|gb|ABX65962.1| hypothetical protein SPAB_00529 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|62180995|ref|YP_217412.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|75481868|sp|Q57LT1|DNLJ_SALCH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|62128628|gb|AAX66331.1| DNA ligase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715476|gb|EFZ07047.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|56412686|ref|YP_149761.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361620|ref|YP_002141256.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81362021|sp|Q5PNE2|DNLJ_SALPA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781414|sp|B5BB72|DNLJ_SALPK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|56126943|gb|AAV76449.1| DNA ligase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093096|emb|CAR58535.1| DNA ligase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|16765747|ref|NP_461362.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167991721|ref|ZP_02572820.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|197262860|ref|ZP_03162934.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|81522316|sp|Q8ZN89|DNLJ_SALTY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|16420966|gb|AAL21321.1| DNA ligase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197241115|gb|EDY23735.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205329843|gb|EDZ16607.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261247627|emb|CBG25454.1| DNA ligase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994529|gb|ACY89414.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158979|emb|CBW18492.1| DNA ligase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913414|dbj|BAJ37388.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321222873|gb|EFX47944.1| DNA ligase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130756|gb|ADX18186.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 671 Score = 40.8 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|313679715|ref|YP_004057454.1| DNA ligase, nad-dependent [Oceanithermus profundus DSM 14977] gi|313152430|gb|ADR36281.1| DNA ligase, NAD-dependent [Oceanithermus profundus DSM 14977] Length = 670 Score = 40.4 bits (93), Expect = 0.070, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ EA V L H YY LD P +D YD + L L+ FPEL P Sbjct: 1 MTREEAARRVAELTWAIRRHNHLYYVLDRPEISDAEYDALVRELAELEAAFPELRSPASP 60 Query: 114 WNTVG 118 N VG Sbjct: 61 TNQVG 65 >gi|307609752|emb|CBW99264.1| DNA ligase [Legionella pneumophila 130b] Length = 650 Score = 40.4 bits (93), Expect = 0.071, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 22/41 (53%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY LD+PL D YDR + L +EQ+P+ D P V Sbjct: 24 YYVLDEPLVPDAEYDRCFKALQQYEEQYPQFLSPDSPTQRV 64 >gi|254502790|ref|ZP_05114941.1| DNA ligase, NAD-dependent [Labrenzia alexandrii DFL-11] gi|222438861|gb|EEE45540.1| DNA ligase, NAD-dependent [Labrenzia alexandrii DFL-11] Length = 725 Score = 40.4 bits (93), Expect = 0.071, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 33/68 (48%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L+ A E+E L H + Y++ D P +D YD + R A++ +FP+L Sbjct: 18 VLDLTPEAAKAELERLASEIAEHDRRYHQEDAPTISDADYDALRRRNSAIEARFPDLILA 77 Query: 111 DHPWNTVG 118 D P VG Sbjct: 78 DGPSAQVG 85 >gi|189425977|ref|YP_001953154.1| DNA ligase, NAD-dependent [Geobacter lovleyi SZ] gi|254781338|sp|B3E8F8|DNLJ_GEOLS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|189422236|gb|ACD96634.1| DNA ligase, NAD-dependent [Geobacter lovleyi SZ] Length = 683 Score = 40.4 bits (93), Expect = 0.071, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L ++ HH + YY LD P +D YD + L ++ P+L D P VG Sbjct: 16 AQLRAAELRRLLEHHNRCYYELDSPEISDAEYDALFRELQVIEAARPDLLTPDSPTLRVG 75 >gi|160934306|ref|ZP_02081693.1| hypothetical protein CLOLEP_03177 [Clostridium leptum DSM 753] gi|156866979|gb|EDO60351.1| hypothetical protein CLOLEP_03177 [Clostridium leptum DSM 753] Length = 661 Score = 40.4 bits (93), Expect = 0.071, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H K YY D+P TD YD + L+ ++ +PEL ED P VG Sbjct: 19 YHAKKYYEEDNPEITDYEYDMMLRELEGIELAYPELVTEDSPTQRVG 65 >gi|197121145|ref|YP_002133096.1| DNA ligase, NAD-dependent [Anaeromyxobacter sp. K] gi|254781542|sp|B4UDH6|DNLJ_ANASK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|196170994|gb|ACG71967.1| DNA ligase, NAD-dependent [Anaeromyxobacter sp. K] Length = 687 Score = 40.4 bits (93), Expect = 0.072, Method: Composition-based stats. Identities = 19/41 (46%), Positives = 21/41 (51%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY LD PL D YDR+ L AL+ PEL D P V Sbjct: 24 YYVLDQPLLADAEYDRLMHELQALEADHPELVTADSPTQRV 64 >gi|21231024|ref|NP_636941.1| NAD-dependent DNA ligase LigA [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768971|ref|YP_243733.1| NAD-dependent DNA ligase LigA [Xanthomonas campestris pv. campestris str. 8004] gi|188992085|ref|YP_001904095.1| NAD-dependent DNA ligase LigA [Xanthomonas campestris pv. campestris str. B100] gi|81305065|sp|Q4UTB0|DNLJ_XANC8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|81794799|sp|Q8PAB5|DNLJ_XANCP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254782312|sp|B0RUY2|DNLJ_XANCB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|21112648|gb|AAM40865.1| DNA ligase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574303|gb|AAY49713.1| DNA ligase [Xanthomonas campestris pv. campestris str. 8004] gi|167733845|emb|CAP52051.1| DNA ligase (NAD(+)) [Xanthomonas campestris pv. campestris] Length = 833 Score = 40.4 bits (93), Expect = 0.072, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 24/43 (55%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 Y+ LD+P D YDR+ L+AL+ PEL D P VGY Sbjct: 25 YHVLDEPQIADVEYDRLLRELEALEAAHPELATADSPTQRVGY 67 >gi|29140957|ref|NP_804299.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213160907|ref|ZP_03346617.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213424270|ref|ZP_03357114.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213583650|ref|ZP_03365476.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213650852|ref|ZP_03380905.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|29136582|gb|AAO68148.1| DNA ligase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 671 Score = 40.4 bits (93), Expect = 0.072, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEILDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|16761347|ref|NP_456964.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|81513487|sp|Q8Z4W4|DNLJ_SALTI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|25294013|pir||AI0809 DNA ligase (NAD) (EC 6.5.1.2) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503646|emb|CAD07659.1| DNA ligase [Salmonella enterica subsp. enterica serovar Typhi] Length = 671 Score = 40.4 bits (93), Expect = 0.072, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEILDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|186680717|ref|YP_001863913.1| NAD-dependent DNA ligase LigA [Nostoc punctiforme PCC 73102] gi|254781381|sp|B2J3P0|DNLJ_NOSP7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|186463169|gb|ACC78970.1| DNA ligase, NAD-dependent [Nostoc punctiforme PCC 73102] Length = 678 Score = 40.4 bits (93), Expect = 0.072, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P+ D +YD++ L L+ Q+PEL D P VG Sbjct: 25 YYVLDTPIMEDSVYDQLYRELQQLEIQYPELTAPDSPTQRVG 66 >gi|307293327|ref|ZP_07573173.1| DNA ligase, NAD-dependent [Sphingobium chlorophenolicum L-1] gi|306881393|gb|EFN12609.1| DNA ligase, NAD-dependent [Sphingobium chlorophenolicum L-1] Length = 711 Score = 40.4 bits (93), Expect = 0.073, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 31/67 (46%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 T +++ EA + L + H + Y+ D P TD YD + +AL+ FP L D Sbjct: 5 TPMTEAEAANRLMRLAREIARHNRLYHDQDQPEITDAAYDALIRENNALEAAFPHLIRSD 64 Query: 112 HPWNTVG 118 P VG Sbjct: 65 SPNAQVG 71 >gi|114047080|ref|YP_737630.1| DNA ligase, NAD-dependent [Shewanella sp. MR-7] gi|113888522|gb|ABI42573.1| DNA ligase, NAD-dependent [Shewanella sp. MR-7] Length = 690 Score = 40.4 bits (93), Expect = 0.074, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D P TD YDR+ +RL L+ ++P+ D P VG Sbjct: 39 HNIRYYVDDAPSITDSEYDRLMQRLKQLEAEYPQFVAADSPTQRVG 84 >gi|288958932|ref|YP_003449273.1| DNA ligase (NAD+) [Azospirillum sp. B510] gi|288911240|dbj|BAI72729.1| DNA ligase (NAD+) [Azospirillum sp. B510] Length = 788 Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH + Y++ D P TD YD + R A++ +FPEL D P VG Sbjct: 37 HHDRLYHQQDQPEITDADYDALVRRNLAIEARFPELRRADSPSLRVG 83 >gi|256820386|ref|YP_003141665.1| DNA ligase, NAD-dependent [Capnocytophaga ochracea DSM 7271] gi|256581969|gb|ACU93104.1| DNA ligase, NAD-dependent [Capnocytophaga ochracea DSM 7271] Length = 662 Score = 40.4 bits (93), Expect = 0.075, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 28/46 (60%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P +D +D+ + L AL++ +PE +DE+ P VG Sbjct: 15 HNYNYYVLDNPTISDYEFDQKLKELQALEQAYPEFYDENSPTVRVG 60 >gi|166216287|sp|Q0HK31|DNLJ_SHESM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 688 Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D P TD YDR+ +RL L+ ++P+ D P VG Sbjct: 37 HNIRYYVDDAPSITDSEYDRLMQRLKQLEAEYPQFVAADSPTQRVG 82 >gi|300867541|ref|ZP_07112191.1| DNA ligase [Oscillatoria sp. PCC 6506] gi|300334429|emb|CBN57361.1| DNA ligase [Oscillatoria sp. PCC 6506] Length = 690 Score = 40.4 bits (93), Expect = 0.076, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P+ D +YDR+ L L+ Q PEL + P VG Sbjct: 23 YYVLDTPIMPDEVYDRLYRELQELETQHPELISLESPTQRVG 64 >gi|166216288|sp|Q0HWD2|DNLJ_SHESR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 688 Score = 40.4 bits (93), Expect = 0.076, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D P TD YDR+ +RL L+ ++P+ D P VG Sbjct: 37 HNIRYYVDDAPSITDSEYDRLMQRLKQLEAEYPQFVAADSPTQRVG 82 >gi|113969850|ref|YP_733643.1| DNA ligase, NAD-dependent [Shewanella sp. MR-4] gi|113884534|gb|ABI38586.1| DNA ligase, NAD-dependent [Shewanella sp. MR-4] Length = 690 Score = 40.4 bits (93), Expect = 0.076, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D P TD YDR+ +RL L+ ++P+ D P VG Sbjct: 39 HNIRYYVDDAPSITDSEYDRLMQRLKQLEAEYPQFVAADSPTQRVG 84 >gi|315223456|ref|ZP_07865313.1| NAD-dependent DNA ligase LigA [Capnocytophaga ochracea F0287] gi|314946629|gb|EFS98620.1| NAD-dependent DNA ligase LigA [Capnocytophaga ochracea F0287] Length = 662 Score = 40.4 bits (93), Expect = 0.077, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 28/46 (60%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P +D +D+ + L AL++ +PE +DE+ P VG Sbjct: 15 HNYNYYVLDNPTISDYEFDQKLKELQALEQAYPEFYDENSPTVRVG 60 >gi|254427631|ref|ZP_05041338.1| DNA ligase, NAD-dependent [Alcanivorax sp. DG881] gi|196193800|gb|EDX88759.1| DNA ligase, NAD-dependent [Alcanivorax sp. DG881] Length = 776 Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY DDP D YDR L L+ Q+P+L D P VG Sbjct: 24 YYVQDDPAVPDAEYDRAFRELKDLEAQYPDLITADSPTQRVG 65 >gi|332041431|gb|EGI77793.1| DNA ligase [Hylemonella gracilis ATCC 19624] Length = 738 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 23/46 (50%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 HH YY LD P D YDR+ + L A++ PEL D P V Sbjct: 34 HHAHRYYVLDAPEIPDAEYDRLFQELQAIEAAHPELRTPDSPTQRV 79 >gi|289663144|ref|ZP_06484725.1| NAD-dependent DNA ligase LigA [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 833 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 26/43 (60%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 Y+ LD+P D YDR+ L+AL+ ++P+L D P VG+ Sbjct: 25 YHVLDEPQMADVDYDRLMRELEALEAEYPQLASADSPTQRVGH 67 >gi|54293931|ref|YP_126346.1| DNA ligase [Legionella pneumophila str. Lens] gi|81368949|sp|Q5WXV3|DNLJ_LEGPL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|53753763|emb|CAH15221.1| DNA ligase [Legionella pneumophila str. Lens] Length = 673 Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 22/41 (53%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY LD+PL D YDR + L +EQ+P+ D P V Sbjct: 24 YYVLDEPLVPDAEYDRCFKALQQYEEQYPQFLSPDSPTQRV 64 >gi|317012429|gb|ADU83037.1| NAD-dependent DNA ligase LigA [Helicobacter pylori Lithuania75] Length = 656 Score = 40.4 bits (93), Expect = 0.080, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%) Query: 64 EYLVKIAL-----HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL +IA HH YY LD+P+ +D +YD + + L A +E+ P + P VG Sbjct: 7 EYLERIAYLNTLSHH---YYNLDEPIVSDAIYDELYQELKAYEEKNPNDIQANSPTQKVG 63 >gi|296106543|ref|YP_003618243.1| DNA ligase (NAD ) [Legionella pneumophila 2300/99 Alcoy] gi|295648444|gb|ADG24291.1| DNA ligase (NAD ) [Legionella pneumophila 2300/99 Alcoy] Length = 673 Score = 40.4 bits (93), Expect = 0.080, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 22/41 (53%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY LD+PL D YDR + L +EQ+P+ D P V Sbjct: 24 YYVLDEPLVPDAEYDRCFKALQQYEEQYPQFLSPDSPTQRV 64 >gi|254292786|ref|YP_003058809.1| DNA ligase, NAD-dependent [Hirschia baltica ATCC 49814] gi|254041317|gb|ACT58112.1| DNA ligase, NAD-dependent [Hirschia baltica ATCC 49814] Length = 792 Score = 40.4 bits (93), Expect = 0.080, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 SL+ +A E L + YY D P +D YD + + L AL+ +FP+L +D Sbjct: 15 SLTLDQARERWEELAETIRQADSAYYEHDAPHLSDADYDALRQDLLALESEFPQLVAQDS 74 Query: 113 PWNTVG 118 P +VG Sbjct: 75 PSQSVG 80 >gi|148360390|ref|YP_001251597.1| DNA ligase [Legionella pneumophila str. Corby] gi|166215817|sp|A5IFV1|DNLJ_LEGPC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|148282163|gb|ABQ56251.1| DNA ligase [Legionella pneumophila str. Corby] Length = 673 Score = 40.4 bits (93), Expect = 0.080, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 22/41 (53%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY LD+PL D YDR + L +EQ+P+ D P V Sbjct: 24 YYVLDEPLVPDAEYDRCFKALQQYEEQYPQFLSPDSPTQRV 64 >gi|54296979|ref|YP_123348.1| DNA ligase [Legionella pneumophila str. Paris] gi|81370862|sp|Q5X6E6|DNLJ_LEGPA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|53750764|emb|CAH12171.1| DNA ligase [Legionella pneumophila str. Paris] Length = 673 Score = 40.4 bits (93), Expect = 0.080, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 22/41 (53%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY LD+PL D YDR + L +EQ+P+ D P V Sbjct: 24 YYVLDEPLVPDAEYDRCFKALQQYEEQYPQFLSPDSPTQRV 64 >gi|303232470|ref|ZP_07319159.1| DNA ligase (NAD+) [Atopobium vaginae PB189-T1-4] gi|302481435|gb|EFL44506.1| DNA ligase (NAD+) [Atopobium vaginae PB189-T1-4] Length = 836 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 28/49 (57%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 A + V L ++ +H YY LDDPL +D +D + L AL++ PEL Sbjct: 96 AALRVPELRRLLTYHAWRYYALDDPLISDAQFDAYLQELIALEQAHPEL 144 >gi|166215832|sp|Q5ZWX6|DNLJ_LEGPH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 673 Score = 40.4 bits (93), Expect = 0.081, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 22/41 (53%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY LD+PL D YDR + L +EQ+P+ D P V Sbjct: 24 YYVLDEPLVPDAEYDRCFKALQQYEEQYPQFLSPDSPTQRV 64 >gi|257784913|ref|YP_003180130.1| DNA ligase, NAD-dependent [Atopobium parvulum DSM 20469] gi|257473420|gb|ACV51539.1| DNA ligase, NAD-dependent [Atopobium parvulum DSM 20469] Length = 705 Score = 40.4 bits (93), Expect = 0.082, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + +LS E E L +I H YY LD+P TD +DR+ L L+ +PEL E Sbjct: 1 MAALSPKETARAAE-LNRILNHAAYAYYALDNPELTDAEFDRLLIELQQLEAAYPELITE 59 Query: 111 DHPWNTVG 118 D VG Sbjct: 60 DSYTQRVG 67 >gi|134094553|ref|YP_001099628.1| DNA ligase [Herminiimonas arsenicoxydans] gi|166215813|sp|A4G4R4|DNLJ_HERAR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|133738456|emb|CAL61501.1| DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) [Herminiimonas arsenicoxydans] Length = 696 Score = 40.4 bits (93), Expect = 0.082, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P+ D YD++ L AL+ PEL D P VG Sbjct: 41 HNYAYYVLDNPIVPDAEYDQLFRELQALEASHPELLVFDSPTQRVG 86 >gi|288927843|ref|ZP_06421690.1| DNA ligase, NAD-dependent [Prevotella sp. oral taxon 317 str. F0108] gi|288330677|gb|EFC69261.1| DNA ligase, NAD-dependent [Prevotella sp. oral taxon 317 str. F0108] Length = 665 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + +E L + HH YY + P +D +DR+ L L+ + PE++D + P V Sbjct: 2 EEIKRIEELREQLHHHNYLYYVQNSPTLSDQEFDRLMRELQDLEAKHPEVYDPNSPTQRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|254781172|ref|YP_003065585.1| NAD-dependent DNA ligase LigA [Candidatus Liberibacter asiaticus str. psy62] gi|254040849|gb|ACT57645.1| NAD-dependent DNA ligase LigA [Candidatus Liberibacter asiaticus str. psy62] Length = 731 Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF-- 108 + +LS +A E+ L + +H YY+ P+ D YD + R DA+ FP+L Sbjct: 9 IEALSIEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARS 68 Query: 109 -DEDHPWNTVG 118 D + P N +G Sbjct: 69 EDPNGPLNKIG 79 >gi|308061946|gb|ADO03834.1| NAD-dependent DNA ligase LigA [Helicobacter pylori Cuz20] Length = 656 Score = 40.4 bits (93), Expect = 0.083, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL ++ HH YY LDD + +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYLNTLS-HH---YYNLDDSIVSDAVYDELYQELKAYEEKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|45659103|ref|YP_003189.1| NAD dependent DNA ligase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|81406496|sp|Q72MA6|DNLJ_LEPIC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|45602349|gb|AAS71826.1| NAD dependent DNA ligase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 681 Score = 40.4 bits (93), Expect = 0.085, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 35/66 (53%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +LS+ EA + L HHQ YY +DP +D +D++ RL L+E+FP+ D Sbjct: 11 TLSEKEAKGLIAKLSDEIRHHQYLYYVKNDPKISDFDFDQLFRRLQDLEEEFPQFKDLAS 70 Query: 113 PWNTVG 118 P VG Sbjct: 71 PTLVVG 76 >gi|24216818|ref|NP_714299.1| NAD dependent DNA ligase [Leptospira interrogans serovar Lai str. 56601] gi|81465271|sp|Q8EYU4|DNLJ_LEPIN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|24198185|gb|AAN51317.1| NAD dependent DNA ligase [Leptospira interrogans serovar Lai str. 56601] Length = 681 Score = 40.4 bits (93), Expect = 0.085, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 35/66 (53%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +LS+ EA + L HHQ YY +DP +D +D++ RL L+E+FP+ D Sbjct: 11 TLSEKEAKGLIAKLSDEIRHHQYLYYVKNDPKISDFDFDQLFRRLQDLEEEFPQFKDLAS 70 Query: 113 PWNTVG 118 P VG Sbjct: 71 PTLVVG 76 >gi|257069044|ref|YP_003155299.1| DNA ligase, NAD-dependent [Brachybacterium faecium DSM 4810] gi|256559862|gb|ACU85709.1| DNA ligase, NAD-dependent [Brachybacterium faecium DSM 4810] Length = 871 Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D YD + + L AL+E P+L ED P TVG Sbjct: 39 YYEHDAPTMADAEYDELEKELRALEEANPQLAAEDSPTRTVG 80 >gi|52841193|ref|YP_094992.1| DNA ligase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628304|gb|AAU27045.1| DNA ligase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 683 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 22/41 (53%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY LD+PL D YDR + L +EQ+P+ D P V Sbjct: 34 YYVLDEPLVPDAEYDRCFKALQQYEEQYPQFLSPDSPTQRV 74 >gi|82701780|ref|YP_411346.1| DNA ligase, NAD-dependent [Nitrosospira multiformis ATCC 25196] gi|123754406|sp|Q2YBB7|DNLJ_NITMU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|82409845|gb|ABB73954.1| DNA ligase, NAD-dependent [Nitrosospira multiformis ATCC 25196] Length = 707 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 69 IALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 I LH+ + YY LD P D +D++ L+ L+++ PEL D P VG Sbjct: 19 IELHNIR-YYELDTPTIPDADFDKLFRELEELEQRHPELITPDSPTQRVG 67 >gi|317049042|ref|YP_004116690.1| DNA ligase, NAD-dependent [Pantoea sp. At-9b] gi|316950659|gb|ADU70134.1| DNA ligase, NAD-dependent [Pantoea sp. At-9b] Length = 672 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ +L L+ PEL D P VG Sbjct: 17 HHEYLYHVMDTPEVPDAEYDRLMAQLRELESAHPELVTPDSPTQRVG 63 >gi|298528094|ref|ZP_07015498.1| DNA ligase, NAD-dependent [Desulfonatronospira thiodismutans ASO3-1] gi|298511746|gb|EFI35648.1| DNA ligase, NAD-dependent [Desulfonatronospira thiodismutans ASO3-1] Length = 679 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H +YY LDDPL +D YDR+ L L+E+ P L P VG Sbjct: 22 HNYYYYVLDDPLISDVEYDRMLAELKDLEEKHPGLKHSGSPTMKVG 67 >gi|9107768|gb|AAF85353.1|AE004063_2 DNA ligase [Xylella fastidiosa 9a5c] Length = 837 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 24/43 (55%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 Y+ LD P D YDR+ LDAL+ +P+L D P VG+ Sbjct: 30 YHVLDQPRIPDADYDRMLRELDALEAAYPDLATPDSPTQRVGH 72 >gi|77747612|ref|NP_299833.2| NAD-dependent DNA ligase LigA [Xylella fastidiosa 9a5c] gi|166216281|sp|Q9PAG2|DNLJ_XYLFA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 831 Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 24/43 (55%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 Y+ LD P D YDR+ LDAL+ +P+L D P VG+ Sbjct: 24 YHVLDQPRIPDADYDRMLRELDALEAAYPDLATPDSPTQRVGH 66 >gi|302524940|ref|ZP_07277282.1| DNA ligase, NAD-dependent [Streptomyces sp. AA4] gi|302433835|gb|EFL05651.1| DNA ligase, NAD-dependent [Streptomyces sp. AA4] Length = 707 Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 26/46 (56%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY LD P+ +DG +D + L +++++P L D P VG Sbjct: 28 HQFRYYVLDSPIISDGQFDALLGDLQKIEDEYPALVTPDSPTQNVG 73 >gi|322831833|ref|YP_004211860.1| DNA ligase, NAD-dependent [Rahnella sp. Y9602] gi|321167034|gb|ADW72733.1| DNA ligase, NAD-dependent [Rahnella sp. Y9602] Length = 673 Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ L L+ PEL D P VG Sbjct: 17 HHEYQYHVLDAPEVPDAEYDRLMRELRELETAHPELVTADSPTQRVG 63 >gi|253689765|ref|YP_003018955.1| DNA ligase, NAD-dependent [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756343|gb|ACT14419.1| DNA ligase, NAD-dependent [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 681 Score = 40.0 bits (92), Expect = 0.092, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 29/58 (50%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + V L ++ HH+ Y+ D P D YD++ + L AL+ PEL D P VG Sbjct: 13 LRVAELRRVLRHHEYKYHVEDAPEIPDVEYDKLMQELKALEADHPELVTSDSPTQRVG 70 >gi|320180401|gb|EFW55332.1| DNA ligase [Shigella boydii ATCC 9905] Length = 671 Score = 40.0 bits (92), Expect = 0.093, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELCELETKHPELITPDSPTQRVG 63 >gi|189490484|ref|YP_001957054.1| putative DNA ligase [Pseudomonas phage 201phi2-1] gi|164609549|gb|ABY63158.1| putative DNA ligase [Pseudomonas phage 201phi2-1] Length = 695 Score = 40.0 bits (92), Expect = 0.093, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 30/58 (51%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 E + L K H+ YY LD + D LYD++ L L+++ PE D P TVG+ Sbjct: 6 EYDVLCKRIRHYNYMYYVLDISIIPDSLYDQLLISLKLLEKEHPEWVTRDSPTQTVGH 63 >gi|302537077|ref|ZP_07289419.1| DNA ligase, NAD-dependent [Streptomyces sp. C] gi|302445972|gb|EFL17788.1| DNA ligase, NAD-dependent [Streptomyces sp. C] Length = 736 Score = 40.0 bits (92), Expect = 0.094, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 27/46 (58%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H+ YY D P+ +D +D++ L+AL+EQ+PEL D P V Sbjct: 28 HRFRYYVNDQPVVSDAEFDQLLRSLEALEEQYPELRTPDSPTQKVA 73 >gi|311233982|gb|ADP86836.1| DNA ligase, NAD-dependent [Desulfovibrio vulgaris RCH1] Length = 818 Score = 40.0 bits (92), Expect = 0.094, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H + YY LD P +D YD + L L+ ++P L DE P VG Sbjct: 72 HNRLYYELDTPEISDAEYDALYRELVGLETRWPALRDEASPTQRVG 117 >gi|254422498|ref|ZP_05036216.1| DNA ligase, NAD-dependent [Synechococcus sp. PCC 7335] gi|196189987|gb|EDX84951.1| DNA ligase, NAD-dependent [Synechococcus sp. PCC 7335] Length = 694 Score = 40.0 bits (92), Expect = 0.094, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D +YDR+ L L++Q+P L D P VG Sbjct: 40 YYVLDAPELPDSVYDRLYRELQTLEDQYPGLQTSDSPTQRVG 81 >gi|46580019|ref|YP_010827.1| DNA ligase, NAD-dependent [Desulfovibrio vulgaris str. Hildenborough] gi|81404693|sp|Q72BM7|DNLJ_DESVH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|46449435|gb|AAS96086.1| DNA ligase, NAD-dependent [Desulfovibrio vulgaris str. Hildenborough] Length = 799 Score = 40.0 bits (92), Expect = 0.094, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H + YY LD P +D YD + L L+ ++P L DE P VG Sbjct: 53 HNRLYYELDTPEISDAEYDALYRELVGLETRWPALRDEASPTQRVG 98 >gi|145593768|ref|YP_001158065.1| DNA ligase, NAD-dependent [Salinispora tropica CNB-440] gi|190359283|sp|A4X487|DNLJ_SALTO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145303105|gb|ABP53687.1| DNA ligase, NAD-dependent [Salinispora tropica CNB-440] Length = 711 Score = 40.0 bits (92), Expect = 0.095, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY LD P +D +D L AL+ +FP L D P VG Sbjct: 40 HQYRYYVLDAPTISDAAFDEQLRELAALEAEFPALRTPDSPTQRVG 85 >gi|119774653|ref|YP_927393.1| DNA ligase (NAD(+)) [Shewanella amazonensis SB2B] gi|166216239|sp|A1S5R7|DNLJ_SHEAM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|119767153|gb|ABL99723.1| DNA ligase (NAD(+)) [Shewanella amazonensis SB2B] Length = 681 Score = 40.0 bits (92), Expect = 0.096, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 28/57 (49%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E++ L H YY D P D YDR+ +L AL+ ++P+ + D P VG Sbjct: 17 EIQRLTAEINRHNIAYYVQDAPSIPDAEYDRLMNQLKALEAEYPQFAEPDSPTQRVG 73 >gi|331702040|ref|YP_004398999.1| DNA ligase [Lactobacillus buchneri NRRL B-30929] gi|329129383|gb|AEB73936.1| DNA ligase [Lactobacillus buchneri NRRL B-30929] Length = 675 Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YD+ ++L AL+ QFP++ D P VG Sbjct: 29 YYTYDAPSVEDAVYDQTYQQLVALENQFPQIVTPDSPTQKVG 70 >gi|82544871|ref|YP_408818.1| NAD-dependent DNA ligase LigA [Shigella boydii Sb227] gi|123741957|sp|Q31Y68|DNLJ_SHIBS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|81246282|gb|ABB66990.1| DNA ligase [Shigella boydii Sb227] Length = 671 Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELCELETKHPELITPDSPTQRVG 63 >gi|332092973|gb|EGI98039.1| DNA ligase, NAD-dependent [Shigella boydii 3594-74] Length = 671 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELCELETKHPELITPDSPTQRVG 63 >gi|28199807|ref|NP_780121.1| NAD-dependent DNA ligase LigA [Xylella fastidiosa Temecula1] gi|182682559|ref|YP_001830719.1| NAD-dependent DNA ligase LigA [Xylella fastidiosa M23] gi|81438262|sp|Q87A88|DNLJ_XYLFT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254782314|sp|B2I9S4|DNLJ_XYLF2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|28057928|gb|AAO29770.1| DNA ligase [Xylella fastidiosa Temecula1] gi|182632669|gb|ACB93445.1| DNA ligase, NAD-dependent [Xylella fastidiosa M23] gi|307578838|gb|ADN62807.1| NAD-dependent DNA ligase LigA [Xylella fastidiosa subsp. fastidiosa GB514] Length = 831 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 24/43 (55%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 Y+ LD P D YDR+ LDAL+ +P+L D P VG+ Sbjct: 24 YHVLDQPRIPDADYDRMLRELDALEATYPDLATPDSPTQRVGH 66 >gi|71898271|ref|ZP_00680445.1| NAD-dependent DNA ligase [Xylella fastidiosa Ann-1] gi|71732010|gb|EAO34067.1| NAD-dependent DNA ligase [Xylella fastidiosa Ann-1] Length = 831 Score = 40.0 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 24/43 (55%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 Y+ LD P D YDR+ LDAL+ +P+L D P VG+ Sbjct: 24 YHVLDQPRIPDADYDRMLRELDALEATYPDLATPDSPTQRVGH 66 >gi|227328979|ref|ZP_03833003.1| NAD-dependent DNA ligase LigA [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 684 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + V L ++ HH+ Y+ D P D YD++ + L +L+ PEL D P VG Sbjct: 14 AALRVAELRRVLRHHEYKYHVEDAPEIPDVEYDKLMQELKSLEAAHPELVTSDSPTQRVG 73 >gi|20807100|ref|NP_622271.1| NAD-dependent DNA ligase [Thermoanaerobacter tengcongensis MB4] gi|81482513|sp|Q8RC42|DNLJ_THETN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|20515592|gb|AAM23875.1| NAD-dependent DNA ligase (contains BRCT domain type II) [Thermoanaerobacter tengcongensis MB4] Length = 666 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + EA +E L + +H YY LD P +D YD + L L+E++PE D P Sbjct: 1 MDREEARKRIEELREKINYHNYRYYVLDQPEISDYEYDMLMRELIELEEKYPEFKTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|71899829|ref|ZP_00681979.1| NAD-dependent DNA ligase [Xylella fastidiosa Ann-1] gi|254782317|sp|B0U5G7|DNLJ_XYLFM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|71730420|gb|EAO32501.1| NAD-dependent DNA ligase [Xylella fastidiosa Ann-1] Length = 831 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 24/43 (55%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 Y+ LD P D YDR+ LDAL+ +P+L D P VG+ Sbjct: 24 YHVLDQPRIPDADYDRMLRELDALEATYPDLATPDSPTQRVGH 66 >gi|71275191|ref|ZP_00651478.1| NAD-dependent DNA ligase [Xylella fastidiosa Dixon] gi|170731182|ref|YP_001776615.1| NAD-dependent DNA ligase LigA [Xylella fastidiosa M12] gi|71164000|gb|EAO13715.1| NAD-dependent DNA ligase [Xylella fastidiosa Dixon] gi|167965975|gb|ACA12985.1| DNA ligase (NAD(+)) [Xylella fastidiosa M12] Length = 837 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 24/43 (55%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 Y+ LD P D YDR+ LDAL+ +P+L D P VG+ Sbjct: 30 YHVLDQPRIPDADYDRMLRELDALEATYPDLATPDSPTQRVGH 72 >gi|297626017|ref|YP_003687780.1| DNA ligase (NAD+) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921782|emb|CBL56340.1| DNA ligase (NAD+) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 764 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LVK Q+ YY D P TD LYD + L L+ ++P L D P VG Sbjct: 35 LVKEIDDAQEAYYGRDKPFITDALYDELMLELQKLEAEYPSLRTPDSPTQRVG 87 >gi|298492390|ref|YP_003722567.1| DNA ligase, NAD-dependent ['Nostoc azollae' 0708] gi|298234308|gb|ADI65444.1| DNA ligase, NAD-dependent ['Nostoc azollae' 0708] Length = 684 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P+ D +YDR+ L L+ Q+P L D P VG Sbjct: 25 YYVLDAPVMEDMVYDRLYRELQELETQYPYLVTPDSPTQRVG 66 >gi|124302218|gb|ABN05294.1| DNA ligase [Geobacillus sp. g] Length = 670 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY L P D YDR+ + L A++EQ+PEL D P +G Sbjct: 24 YYVLGRPSVPDAEYDRLMQELMAIEEQYPELKTSDSPTQRIG 65 >gi|169335238|ref|ZP_02862431.1| hypothetical protein ANASTE_01646 [Anaerofustis stercorihominis DSM 17244] gi|169257976|gb|EDS71942.1| hypothetical protein ANASTE_01646 [Anaerofustis stercorihominis DSM 17244] Length = 659 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 32/57 (56%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+E L + L H + YY D+P +D YD + +L L+E++P+ E P + VG Sbjct: 7 EIEKLTEELLEHNRKYYEEDNPSISDYDYDMLIRKLTKLEEEYPQYKKEYSPTDRVG 63 >gi|317507336|ref|ZP_07965075.1| DNA ligase [Segniliparus rugosus ATCC BAA-974] gi|316254381|gb|EFV13712.1| DNA ligase [Segniliparus rugosus ATCC BAA-974] Length = 712 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY LD P TD +D + L AL+++ PEL P VG Sbjct: 25 HQFRYYVLDSPTVTDAEFDALLRELQALEDEHPELASASSPTKLVG 70 >gi|156740882|ref|YP_001431011.1| DNA ligase, NAD-dependent [Roseiflexus castenholzii DSM 13941] gi|190359279|sp|A7NHP6|DNLJ_ROSCS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|156232210|gb|ABU56993.1| DNA ligase, NAD-dependent [Roseiflexus castenholzii DSM 13941] Length = 718 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + + E L + +H YY LD+P+ +D YD + L L+ PEL D P Sbjct: 1 MTSNDPVRRAETLREQIRYHNYRYYVLDEPVISDAEYDALMRELRELEAAHPELVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|34540958|ref|NP_905437.1| DNA ligase, NAD-dependent [Porphyromonas gingivalis W83] gi|81417286|sp|Q7MV47|DNLJ_PORGI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|34397273|gb|AAQ66336.1| DNA ligase, NAD-dependent [Porphyromonas gingivalis W83] Length = 669 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 31/58 (53%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + +E L +I H+ YY L P D YD + ++L+ L+ ++PE D P + VG Sbjct: 9 VRIEELRRILREHEYRYYVLSSPTIDDFEYDAMMKQLEELEREYPEWDSPDSPTHRVG 66 >gi|153853203|ref|ZP_01994612.1| hypothetical protein DORLON_00597 [Dorea longicatena DSM 13814] gi|149753989|gb|EDM63920.1| hypothetical protein DORLON_00597 [Dorea longicatena DSM 13814] Length = 692 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 3/70 (4%) Query: 52 TSLSKGEAMI--EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 T KG++M ++ LVK ++ YY D PL +D YDR+ ++L L+EQ + Sbjct: 19 TPQKKGDSMSIKRIKNLVKQLNEYRHAYYNQDAPLVSDAEYDRLFDKLKKLEEQTGFIL- 77 Query: 110 EDHPWNTVGY 119 + P TVGY Sbjct: 78 SNSPTQTVGY 87 >gi|261345310|ref|ZP_05972954.1| DNA ligase, NAD-dependent [Providencia rustigianii DSM 4541] gi|282566645|gb|EFB72180.1| DNA ligase, NAD-dependent [Providencia rustigianii DSM 4541] Length = 678 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YD++ + L L+ + PEL D P VG Sbjct: 23 HHEYLYHVLDAPEIPDVEYDKLMQELKGLEAENPELITTDSPTQRVG 69 >gi|75906538|ref|YP_320834.1| NAD-dependent DNA ligase LigA [Anabaena variabilis ATCC 29413] gi|123745307|sp|Q3MGE7|DNLJ_ANAVT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|75700263|gb|ABA19939.1| NAD-dependent DNA ligase [Anabaena variabilis ATCC 29413] Length = 676 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 VE L ++ YY LD P+ D +YD++ L L+ Q PEL D P +G Sbjct: 11 VEELRRLLQQASYAYYVLDAPVMEDAVYDQLYRELQQLEIQHPELVTPDSPTQRIG 66 >gi|309812136|ref|ZP_07705894.1| DNA ligase (NAD+) [Dermacoccus sp. Ellin185] gi|308433823|gb|EFP57697.1| DNA ligase (NAD+) [Dermacoccus sp. Ellin185] Length = 770 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P +DG YD + L ++E +PEL + P VG Sbjct: 39 HQFAYYVKDAPTISDGEYDELLRELQGVEESYPELRSPESPTQRVG 84 >gi|188995252|ref|YP_001929504.1| DNA ligase [Porphyromonas gingivalis ATCC 33277] gi|254781390|sp|B2RKL2|DNLJ_PORG3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|188594932|dbj|BAG33907.1| DNA ligase [Porphyromonas gingivalis ATCC 33277] Length = 669 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 31/58 (53%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + +E L +I H+ YY L P D YD + ++L+ L+ ++PE D P + VG Sbjct: 9 VRIEELRRILREHEYRYYVLSSPTIDDFEYDAMMKQLEELEREYPEWDSPDSPTHRVG 66 >gi|50122504|ref|YP_051671.1| NAD-dependent DNA ligase LigA [Pectobacterium atrosepticum SCRI1043] gi|81644069|sp|Q6D165|DNLJ_ERWCT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|49613030|emb|CAG76481.1| DNA ligase [Pectobacterium atrosepticum SCRI1043] Length = 681 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 29/58 (50%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + V L ++ HH+ Y+ D P D YD++ + L AL+ PEL D P VG Sbjct: 6 LRVAELRRVLRHHEYKYHVEDAPEIPDIEYDKLMQELKALEADHPELVTSDSPTQRVG 63 >gi|16077730|ref|NP_388544.1| NAD-dependent DNA ligase LigA [Bacillus subtilis subsp. subtilis str. 168] gi|221308499|ref|ZP_03590346.1| NAD-dependent DNA ligase LigA [Bacillus subtilis subsp. subtilis str. 168] gi|221312822|ref|ZP_03594627.1| NAD-dependent DNA ligase LigA [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317746|ref|ZP_03599040.1| NAD-dependent DNA ligase LigA [Bacillus subtilis subsp. subtilis str. JH642] gi|221322025|ref|ZP_03603319.1| NAD-dependent DNA ligase LigA [Bacillus subtilis subsp. subtilis str. SMY] gi|7673987|sp|O31498|DNLJ_BACSU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|2632976|emb|CAB12482.1| DNA ligase [Bacillus subtilis subsp. subtilis str. 168] Length = 668 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+P D YDR+ + L A++E+ P+L D P VG Sbjct: 24 YYTLDEPSVPDAEYDRLMQELIAIEEEHPDLRTPDSPTQRVG 65 >gi|321314391|ref|YP_004206678.1| NAD-dependent DNA ligase LigA [Bacillus subtilis BSn5] gi|320020665|gb|ADV95651.1| NAD-dependent DNA ligase LigA [Bacillus subtilis BSn5] Length = 668 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+P D YDR+ + L A++E+ P+L D P VG Sbjct: 24 YYTLDEPSVPDAEYDRLMQELIAIEEEHPDLRTPDSPTQRVG 65 >gi|219850499|ref|YP_002464932.1| DNA ligase, NAD-dependent [Chloroflexus aggregans DSM 9485] gi|254781282|sp|B8GAC1|DNLJ_CHLAD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219544758|gb|ACL26496.1| DNA ligase, NAD-dependent [Chloroflexus aggregans DSM 9485] Length = 681 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E+ L++ +H YY LDDP+ +D YD + L AL+ PEL D P V Sbjct: 12 ELRTLIRRYDYH---YYVLDDPIVSDAEYDALMNELRALEAAHPELITPDSPTQRV 64 >gi|33866919|ref|NP_898478.1| NAD-dependent DNA ligase LigA [Synechococcus sp. WH 8102] gi|81573701|sp|Q7U3P1|DNLJ_SYNPX RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|33639520|emb|CAE08904.1| Putative DNA ligase [Synechococcus sp. WH 8102] Length = 679 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L+ A H YY LD P+ D LYDR+ L L++ P L D P VG Sbjct: 10 ELRSLLNRAAHA---YYVLDAPVMEDTLYDRLYRELQQLEQADPSLLSADSPTQRVG 63 >gi|291483102|dbj|BAI84177.1| NAD-dependent DNA ligase LigA [Bacillus subtilis subsp. natto BEST195] Length = 668 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+P D YDR+ + L A++E+ P+L D P VG Sbjct: 24 YYTLDEPSVPDAEYDRLMQELIAIEEEHPDLRTPDSPTQRVG 65 >gi|76801093|ref|YP_326101.1| NAD-dependent DNA ligase LigA [Natronomonas pharaonis DSM 2160] gi|121729348|sp|Q3ITK1|DNLJ_NATPD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|76556958|emb|CAI48532.1| DNA ligase (NAD) [Natronomonas pharaonis DSM 2160] Length = 691 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 30/54 (55%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 V L A +VE L + H YY+L DP+ +D YD++ ERL+ L+ +F Sbjct: 20 VDELDAASATRQVETLREAIRFHDYRYYQLADPVISDRAYDQLFERLERLESKF 73 >gi|296330120|ref|ZP_06872602.1| NAD-dependent DNA ligase LigA [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673365|ref|YP_003865037.1| NAD-dependent DNA ligase [Bacillus subtilis subsp. spizizenii str. W23] gi|296152709|gb|EFG93576.1| NAD-dependent DNA ligase LigA [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411609|gb|ADM36728.1| NAD-dependent DNA ligase [Bacillus subtilis subsp. spizizenii str. W23] Length = 668 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+P D YDR+ + L A++E+ P+L D P VG Sbjct: 24 YYTLDEPSVPDAEYDRLMQELIAIEEEHPDLRTPDSPTQRVG 65 >gi|229591993|ref|YP_002874112.1| NAD-dependent DNA ligase LigA [Pseudomonas fluorescens SBW25] gi|254781395|sp|C3JXX6|DNLJ_PSEFS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|229363859|emb|CAY51325.1| DNA ligase [Pseudomonas fluorescens SBW25] Length = 785 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P+L D P VG Sbjct: 17 QHNYRYHVLDEPSIPDAEYDRLFHELKALEAEHPDLVTRDSPTQRVG 63 >gi|154148661|ref|YP_001406577.1| NAD-dependent DNA ligase LigA [Campylobacter hominis ATCC BAA-381] gi|166215571|sp|A7I236|DNLJ_CAMHC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|153804670|gb|ABS51677.1| DNA ligase, NAD-dependent [Campylobacter hominis ATCC BAA-381] Length = 645 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Query: 60 MIEVEYLVKIALHH--QKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 M E EYL + + + K YY D+PL TD YD + ++++ + +FP+L P N V Sbjct: 1 MSEAEYLKAVEMLNIWAKAYYTQDNPLATDIEYDVLYKKVETFENEFPDLKVSYSPTNRV 60 Query: 118 G 118 G Sbjct: 61 G 61 >gi|126661836|ref|ZP_01732835.1| DNA ligase [Flavobacteria bacterium BAL38] gi|126625215|gb|EAZ95904.1| DNA ligase [Flavobacteria bacterium BAL38] Length = 663 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 28/47 (59%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P+ +D +D+ ++L L+ Q P+ FDE+ P VG Sbjct: 16 QHNYNYYVLDNPIISDFEFDQKLKQLQDLEIQNPDFFDENSPTQRVG 62 >gi|152984776|ref|YP_001349158.1| NAD-dependent DNA ligase LigA [Pseudomonas aeruginosa PA7] gi|190359272|sp|A6V7X3|DNLJ_PSEA7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|150959934|gb|ABR81959.1| DNA ligase, NAD-dependent [Pseudomonas aeruginosa PA7] Length = 794 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 23/45 (51%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 H YY LD+P D YDR+ L AL+ + P+L D P V Sbjct: 21 HNYRYYVLDEPSIPDAEYDRLFRELQALEAEHPQLLTPDSPTQRV 65 >gi|254510866|ref|ZP_05122933.1| DNA ligase, NAD-dependent [Rhodobacteraceae bacterium KLH11] gi|221534577|gb|EEE37565.1| DNA ligase, NAD-dependent [Rhodobacteraceae bacterium KLH11] Length = 750 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 35/74 (47%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + K V L++ +A E+ L L + Y+ D P +DG YD + R ++ +F Sbjct: 1 MSKTTAVADLTEEDAQQELARLAAELLRANQLYHAEDAPELSDGDYDALKRRNAEIEARF 60 Query: 105 PELFDEDHPWNTVG 118 P+L D P VG Sbjct: 61 PDLKRTDSPSEQVG 74 >gi|120602570|ref|YP_966970.1| DNA ligase, NAD-dependent [Desulfovibrio vulgaris DP4] gi|166215379|sp|A1VDM7|DNLJ2_DESVV RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 2 gi|120562799|gb|ABM28543.1| DNA ligase, NAD-dependent [Desulfovibrio vulgaris DP4] Length = 797 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALH-----HQKWYYRLDDPLFTDGLYDRVSERLDAL 100 + A +VTS ++ +A+ E L H + YY LD P +D YD + L L Sbjct: 21 NDAAEVTSPARHDAIPEEARQRAAQLRADLERHNRLYYELDTPEISDAEYDVLYRELVGL 80 Query: 101 QEQFPELFDEDHPWNTVG 118 + ++P L DE P VG Sbjct: 81 ERRWPALRDEASPTQRVG 98 >gi|77458028|ref|YP_347533.1| NAD-dependent DNA ligase LigA [Pseudomonas fluorescens Pf0-1] gi|123731132|sp|Q3KFB2|DNLJ_PSEPF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|77382031|gb|ABA73544.1| DNA ligase [Pseudomonas fluorescens Pf0-1] Length = 785 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ PEL D P VG Sbjct: 17 QHNYRYHVLDEPSIPDAEYDRLFHELKALEAANPELITSDSPTQRVG 63 >gi|110634347|ref|YP_674555.1| DNA ligase, NAD-dependent [Mesorhizobium sp. BNC1] gi|123162160|sp|Q11GT5|DNLJ_MESSB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|110285331|gb|ABG63390.1| DNA ligase, NAD-dependent [Chelativorans sp. BNC1] Length = 703 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 33/68 (48%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ +A E+ L + H + YY D P +D YD + R A+++ FP L Sbjct: 8 VDELTEEQAKDELARLAQEIGRHDRLYYSEDAPEVSDAEYDALRRRNLAIEQAFPNLIRA 67 Query: 111 DHPWNTVG 118 D P +G Sbjct: 68 DSPSKRIG 75 >gi|319655032|ref|ZP_08009103.1| DNA ligase [Bacillus sp. 2_A_57_CT2] gi|317393299|gb|EFV74066.1| DNA ligase [Bacillus sp. 2_A_57_CT2] Length = 668 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 20/42 (47%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD P D YDR+ L L+ QFPEL ED P VG Sbjct: 24 YHVLDQPSVPDAEYDRLMRDLIELEGQFPELKTEDSPTQRVG 65 >gi|294054681|ref|YP_003548339.1| DNA ligase, NAD-dependent [Coraliomargarita akajimensis DSM 45221] gi|293614014|gb|ADE54169.1| DNA ligase, NAD-dependent [Coraliomargarita akajimensis DSM 45221] Length = 711 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H + YY+ P D YDR+ RL AL+ Q PEL P TVG Sbjct: 66 HDRLYYKKAQPEIDDQAYDRLKARLTALESQNPELDFGSSPTQTVG 111 >gi|194333271|ref|YP_002015131.1| DNA ligase, NAD-dependent [Prosthecochloris aestuarii DSM 271] gi|254781391|sp|B4S4Y6|DNLJ_PROA2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|194311089|gb|ACF45484.1| DNA ligase, NAD-dependent [Prosthecochloris aestuarii DSM 271] Length = 675 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A+ E+ L H YY L P +D +D+ ERL AL++ FP+L D P Sbjct: 1 MQRKDALKEIARLRDELNRHNYRYYVLAQPEISDYAFDQELERLIALEKAFPDLVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|170746461|ref|YP_001752721.1| DNA ligase, NAD-dependent [Methylobacterium radiotolerans JCM 2831] gi|254781368|sp|B1M575|DNLJ_METRJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|170652983|gb|ACB22038.1| DNA ligase, NAD-dependent [Methylobacterium radiotolerans JCM 2831] Length = 810 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 L+ EA E L L + YY+ D P +D YDR+ RL+ ++ +FP+L Sbjct: 13 LTAEEARAEYARLSDAILEADRLYYQEDAPEISDAEYDRLRRRLEDIEARFPDL 66 >gi|217970592|ref|YP_002355826.1| DNA ligase, NAD-dependent [Thauera sp. MZ1T] gi|217507919|gb|ACK54930.1| DNA ligase, NAD-dependent [Thauera sp. MZ1T] Length = 693 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 22/46 (47%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P D YDR+ L A++ +P L D P VG Sbjct: 30 HDHAYYVLDAPTIPDAEYDRLFRELQAIERAYPALRSADSPTQRVG 75 >gi|152965283|ref|YP_001361067.1| DNA ligase, NAD-dependent [Kineococcus radiotolerans SRS30216] gi|190359261|sp|A6W7L4|DNLJ_KINRD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|151359800|gb|ABS02803.1| DNA ligase, NAD-dependent [Kineococcus radiotolerans SRS30216] Length = 696 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 76 WYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +Y R PL +DG YD + L AL+EQ P+L D P TVG Sbjct: 31 YYVRNSSPL-SDGQYDALERELRALEEQHPQLRTPDSPTQTVG 72 >gi|226365931|ref|YP_002783714.1| NAD-dependent DNA ligase LigA [Rhodococcus opacus B4] gi|254781403|sp|C1B1S4|DNLJ_RHOOB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|226244421|dbj|BAH54769.1| NAD(+)-dependent DNA ligase [Rhodococcus opacus B4] Length = 697 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ +DG +D + L+ L+ Q+P+L D P VG Sbjct: 29 QHQFRYYVRDAPIISDGEFDALLGELNDLENQYPDLRTPDSPTQLVG 75 >gi|317051097|ref|YP_004112213.1| DNA ligase, NAD-dependent [Desulfurispirillum indicum S5] gi|316946181|gb|ADU65657.1| DNA ligase, NAD-dependent [Desulfurispirillum indicum S5] Length = 660 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY L DP+ DG YD + L AL+ +FP+ D P +G Sbjct: 23 YYTLADPIMGDGEYDGLYRELRALEARFPQYVHADSPTRRIG 64 >gi|116329958|ref|YP_799676.1| DNA ligase (NAD+) [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122282269|sp|Q04W02|DNLJ_LEPBJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116123647|gb|ABJ74918.1| DNA ligase (NAD+) [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 681 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 2/76 (2%) Query: 45 LDKAKKV--TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQE 102 + K KK +LS+ EA + L HHQ YY + P +D +D++ +RL L+E Sbjct: 1 MSKKKKTYQNTLSEKEAKKVIAKLADEIRHHQYLYYVKNQPEISDFDFDQLFKRLRDLEE 60 Query: 103 QFPELFDEDHPWNTVG 118 +FP+ D + P VG Sbjct: 61 EFPQFKDLNSPTLVVG 76 >gi|319941620|ref|ZP_08015944.1| DNA ligase [Sutterella wadsworthensis 3_1_45B] gi|319804850|gb|EFW01704.1| DNA ligase [Sutterella wadsworthensis 3_1_45B] Length = 745 Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Query: 74 QKW---YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++W YY LD+P D YDR L AL+ +FPEL P VG Sbjct: 69 ERWNYEYYVLDEPSVPDAEYDRAFNELKALEARFPELKSRTSPTLRVG 116 >gi|116329438|ref|YP_799158.1| DNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|122282782|sp|Q04XH0|DNLJ_LEPBL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116122182|gb|ABJ80225.1| DNA ligase (NAD+) (contains BRCT domain type II) [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 681 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 2/76 (2%) Query: 45 LDKAKKV--TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQE 102 + K KK +LS+ EA + L HHQ YY + P +D +D++ +RL L+E Sbjct: 1 MSKKKKTYQNTLSEKEAKKVIAKLADEIRHHQYLYYVKNQPEISDFDFDQLFKRLRDLEE 60 Query: 103 QFPELFDEDHPWNTVG 118 +FP+ D + P VG Sbjct: 61 EFPQFKDLNSPTLVVG 76 >gi|315606212|ref|ZP_07881239.1| DNA ligase [Actinomyces sp. oral taxon 180 str. F0310] gi|315312100|gb|EFU60190.1| DNA ligase [Actinomyces sp. oral taxon 180 str. F0310] Length = 777 Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P +D YDR+ L+ ++E++P+L D P +VG Sbjct: 30 YYDRDSPTISDADYDRMYRELEEIEERYPQLRGADSPTMSVG 71 >gi|303247047|ref|ZP_07333322.1| DNA ligase, NAD-dependent [Desulfovibrio fructosovorans JJ] gi|302491473|gb|EFL51358.1| DNA ligase, NAD-dependent [Desulfovibrio fructosovorans JJ] Length = 693 Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LDDP+ D YD + L L+ PEL D + P VG Sbjct: 21 HDYRYYVLDDPVIEDAAYDALYRELRKLETAHPELDDPNSPTKRVG 66 >gi|33241290|ref|NP_876232.1| NAD-dependent DNA ligase LigA [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|81663882|sp|Q7V9J2|DNLJ_PROMA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|33238820|gb|AAQ00885.1| NAD-dependent DNA ligase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 685 Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD PL D ++DR+ L L++Q+P L D P +G Sbjct: 24 YYILDSPLIEDAVFDRLYRELIELEKQYPSLVTPDSPSQRLG 65 >gi|86605509|ref|YP_474272.1| DNA ligase, NAD-dependent [Synechococcus sp. JA-3-3Ab] gi|123765626|sp|Q2JW63|DNLJ_SYNJA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|86554051|gb|ABC99009.1| DNA ligase, NAD-dependent [Synechococcus sp. JA-3-3Ab] Length = 673 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P+ D +YDR+ L L+ +PEL D P VG Sbjct: 23 YYVHDAPILEDSVYDRLYRELQELERAYPELITPDSPTQRVG 64 >gi|254489942|ref|ZP_05103137.1| DNA ligase, NAD-dependent [Methylophaga thiooxidans DMS010] gi|224465027|gb|EEF81281.1| DNA ligase, NAD-dependent [Methylophaga thiooxydans DMS010] Length = 673 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H+ YY D+P D YDR+ L L++ PEL D P VG Sbjct: 20 HYNYLYYVTDNPEVPDAEYDRLFSELQQLEQTHPELLTADSPTQRVG 66 >gi|163845839|ref|YP_001633883.1| DNA ligase, NAD-dependent [Chloroflexus aurantiacus J-10-fl] gi|222523550|ref|YP_002568020.1| DNA ligase, NAD-dependent [Chloroflexus sp. Y-400-fl] gi|190359243|sp|A9WCA1|DNLJ_CHLAA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781286|sp|B9LHI6|DNLJ_CHLSY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|163667128|gb|ABY33494.1| DNA ligase, NAD-dependent [Chloroflexus aurantiacus J-10-fl] gi|222447429|gb|ACM51695.1| DNA ligase, NAD-dependent [Chloroflexus sp. Y-400-fl] Length = 709 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E+ L++ +H YY LDDP+ +D YD + L AL+ PEL D P V Sbjct: 12 ELRSLIRRYDYH---YYVLDDPIVSDAEYDALMTELRALEAAHPELITPDSPTQRV 64 >gi|254430924|ref|ZP_05044627.1| DNA ligase, NAD-dependent [Cyanobium sp. PCC 7001] gi|197625377|gb|EDY37936.1| DNA ligase, NAD-dependent [Cyanobium sp. PCC 7001] Length = 667 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E++ L+ A H YY LD P+ D +YDR+ L L++ PEL D P VG Sbjct: 14 ELQRLLTQAAHA---YYVLDAPVMEDPVYDRLYRELLELEQAHPELIRPDSPTQRVG 67 >gi|17546117|ref|NP_519519.1| putative DNA ligase (polydeoxyribonucleotide synthase [NAD+]) protein [Ralstonia solanacearum GMI1000] gi|81505313|sp|Q8XZJ7|DNLJ_RALSO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|17428413|emb|CAD15100.1| putative dna ligase (polydeoxyribonucleotide synthase [nad+]) protein [Ralstonia solanacearum GMI1000] Length = 813 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ + PEL D P VG Sbjct: 31 YYVLDQPSVPDAEYDRLYRELEALEAEHPELRTPDSPTLRVG 72 >gi|145633173|ref|ZP_01788905.1| DNA ligase [Haemophilus influenzae 3655] gi|144986399|gb|EDJ92978.1| DNA ligase [Haemophilus influenzae 3655] Length = 670 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 7 QLDNLRKTLRQYEYEYHVLDNPTVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|218509214|ref|ZP_03507092.1| NAD-dependent DNA ligase LigA [Rhizobium etli Brasil 5] Length = 202 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH Y D +D YD + R DAL+ +FPEL ED P VG Sbjct: 10 HHDALYQGKDQREISDADYDALKRRNDALEVRFPELIREDSPSRHVG 56 >gi|119512036|ref|ZP_01631131.1| DNA ligase [Nodularia spumigena CCY9414] gi|119463326|gb|EAW44268.1| DNA ligase [Nodularia spumigena CCY9414] Length = 678 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 VE L ++ YY LD P+ D +YD++ L L+ ++PE D P VG Sbjct: 11 VEELRQLLQQASYAYYVLDAPMMEDAVYDQLYRELQELEIKYPEFITPDSPTQRVG 66 >gi|119961355|ref|YP_947208.1| DNA ligase, NAD-dependent [Arthrobacter aurescens TC1] gi|166215391|sp|A1R4P6|DNLJ_ARTAT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|119948214|gb|ABM07125.1| DNA ligase, NAD-dependent [Arthrobacter aurescens TC1] Length = 768 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 28/57 (49%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E E L + ++ YY+ D P +D +D + RL+ L+ PEL D P VG Sbjct: 36 EYEQLADLVRKYRYAYYQEDSPTVSDAEFDELYRRLEELEALHPELVSNDSPTQEVG 92 >gi|114319842|ref|YP_741525.1| DNA ligase, NAD-dependent [Alkalilimnicola ehrlichii MLHE-1] gi|122312282|sp|Q0AAV2|DNLJ_ALHEH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|114226236|gb|ABI56035.1| DNA ligase, NAD-dependent [Alkalilimnicola ehrlichii MLHE-1] Length = 673 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 26/56 (46%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L + H YY LD P+ D YD + L AL+ + PEL D P V Sbjct: 12 IEALRREIREHDHRYYVLDAPVIADAEYDALMAELQALEAEHPELITPDSPSQRVA 67 >gi|325576592|ref|ZP_08147310.1| NAD-dependent DNA ligase LigA [Haemophilus parainfluenzae ATCC 33392] gi|325161155|gb|EGC73270.1| NAD-dependent DNA ligase LigA [Haemophilus parainfluenzae ATCC 33392] Length = 675 Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD+P D YDR+ +L AL+ PEL D P VG Sbjct: 29 YHVLDNPTIPDAEYDRLFHQLKALEAAHPELITADSPTQRVG 70 >gi|226941791|ref|YP_002796865.1| DnlJ [Laribacter hongkongensis HLHK9] gi|254781355|sp|C1D4R5|DNLJ_LARHH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|226716718|gb|ACO75856.1| DnlJ [Laribacter hongkongensis HLHK9] Length = 692 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 24 YYVLDAPSVPDAEYDRLFRELEALEAAHPELASADSPTRRVG 65 >gi|255281707|ref|ZP_05346262.1| DNA ligase, NAD-dependent [Bryantella formatexigens DSM 14469] gi|255267774|gb|EET60979.1| DNA ligase, NAD-dependent [Bryantella formatexigens DSM 14469] Length = 674 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 31/57 (54%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L K +H YY D+P +D YD++ L +L+++ PEL + P VG Sbjct: 11 KIEELRKTLEYHSDRYYNQDNPEISDYEYDQMMLELKSLEKEHPELITPESPTQHVG 67 >gi|331663971|ref|ZP_08364881.1| DNA ligase, NAD-dependent [Escherichia coli TA143] gi|331059770|gb|EGI31747.1| DNA ligase, NAD-dependent [Escherichia coli TA143] Length = 671 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDVEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|300897228|ref|ZP_07115672.1| DNA ligase, NAD-dependent [Escherichia coli MS 198-1] gi|300358986|gb|EFJ74856.1| DNA ligase, NAD-dependent [Escherichia coli MS 198-1] Length = 671 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDVEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|218705919|ref|YP_002413438.1| NAD-dependent DNA ligase LigA [Escherichia coli UMN026] gi|293405854|ref|ZP_06649846.1| DNA ligase [Escherichia coli FVEC1412] gi|298381604|ref|ZP_06991203.1| DNA ligase [Escherichia coli FVEC1302] gi|254781326|sp|B7N602|DNLJ_ECOLU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218433016|emb|CAR13911.1| DNA ligase, NAD(+)-dependent [Escherichia coli UMN026] gi|284922366|emb|CBG35453.1| DNA ligase [Escherichia coli 042] gi|291428062|gb|EFF01089.1| DNA ligase [Escherichia coli FVEC1412] gi|298279046|gb|EFI20560.1| DNA ligase [Escherichia coli FVEC1302] Length = 671 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDVEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|301155433|emb|CBW14899.1| DNA ligase, NAD(+)-dependent [Haemophilus parainfluenzae T3T1] Length = 667 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD+P D YDR+ +L AL+ PEL D P VG Sbjct: 21 YHVLDNPTIPDAEYDRLFHQLKALEAAHPELITADSPTQRVG 62 >gi|224826983|ref|ZP_03700081.1| DNA ligase, NAD-dependent [Lutiella nitroferrum 2002] gi|224600816|gb|EEG07001.1| DNA ligase, NAD-dependent [Lutiella nitroferrum 2002] Length = 815 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 S + +A+ + LV + + + YY D+P D YDR+ L+AL+ PEL D Sbjct: 8 SNEREQAVQRIAELVPLLNRYSREYYERDEPTVPDVEYDRLYRELEALEAAHPELRRADS 67 Query: 113 PWNTVG 118 P VG Sbjct: 68 PTLRVG 73 >gi|319762938|ref|YP_004126875.1| DNA ligase, nad-dependent [Alicycliphilus denitrificans BC] gi|330825018|ref|YP_004388321.1| DNA ligase [Alicycliphilus denitrificans K601] gi|317117499|gb|ADU99987.1| DNA ligase, NAD-dependent [Alicycliphilus denitrificans BC] gi|329310390|gb|AEB84805.1| DNA ligase, NAD-dependent [Alicycliphilus denitrificans K601] Length = 717 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 23/41 (56%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY LD+P D YDRV ++L AL+ +P L D P V Sbjct: 37 YYVLDEPSVPDAEYDRVFQQLQALEGAYPALVTPDSPTQRV 77 >gi|199597353|ref|ZP_03210784.1| NAD-dependent DNA ligase [Lactobacillus rhamnosus HN001] gi|199591869|gb|EDY99944.1| NAD-dependent DNA ligase [Lactobacillus rhamnosus HN001] Length = 674 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 31/71 (43%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 +K + EA EV L K + YY D P TD +YD L AL+ FP+L Sbjct: 3 SKPAAQFTLEEAEAEVAKLRKQLNQWRLEYYTKDAPTVTDNVYDDHYRDLQALEAAFPKL 62 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 63 VTPDSPTQQVG 73 >gi|86608809|ref|YP_477571.1| DNA ligase, NAD-dependent [Synechococcus sp. JA-2-3B'a(2-13)] gi|123724461|sp|Q2JLU3|DNLJ_SYNJB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|86557351|gb|ABD02308.1| DNA ligase, NAD-dependent [Synechococcus sp. JA-2-3B'a(2-13)] Length = 686 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P+ D +YDR+ L L+ +PEL D P VG Sbjct: 23 YYVHDAPILEDSVYDRLYRELQELERAYPELVTPDSPTQRVG 64 >gi|226945096|ref|YP_002800169.1| NAD-dependent DNA ligase LigA [Azotobacter vinelandii DJ] gi|254781546|sp|C1DN27|DNLJ_AZOVD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|226720023|gb|ACO79194.1| DNA ligase, NAD-dependent [Azotobacter vinelandii DJ] Length = 784 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P D YDR+ L AL+ + PEL + P VG Sbjct: 21 HNYRYYVLDAPSVPDAEYDRLFNELKALEAEHPELVTPESPTQRVG 66 >gi|119503165|ref|ZP_01625249.1| DNA ligase (NAD+) [marine gamma proteobacterium HTCC2080] gi|119460811|gb|EAW41902.1| DNA ligase (NAD+) [marine gamma proteobacterium HTCC2080] Length = 673 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YYR D P +D YDR L L+++FP L D P VG Sbjct: 24 YYRNDAPTVSDSEYDRTLLALRELEQKFPHLVSADSPTQRVG 65 >gi|320540519|ref|ZP_08040169.1| DNA ligase, NAD(+)-dependent [Serratia symbiotica str. Tucson] gi|320029450|gb|EFW11479.1| DNA ligase, NAD(+)-dependent [Serratia symbiotica str. Tucson] Length = 685 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ L L+ PEL D P VG Sbjct: 17 HHEYQYHVLDAPEVPDAEYDRLMCELRELESAHPELITADSPTQRVG 63 >gi|159036755|ref|YP_001536008.1| DNA ligase, NAD-dependent [Salinispora arenicola CNS-205] gi|190359280|sp|A8M5E3|DNLJ_SALAI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157915590|gb|ABV97017.1| DNA ligase, NAD-dependent [Salinispora arenicola CNS-205] Length = 710 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY LD P +D +D L AL+ +FP L D P VG Sbjct: 39 HQYRYYVLDAPTISDAEFDERLRELAALEAEFPALRTPDSPTQRVG 84 >gi|319638552|ref|ZP_07993314.1| DNA ligase [Neisseria mucosa C102] gi|317400301|gb|EFV80960.1| DNA ligase [Neisseria mucosa C102] Length = 822 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++YL + + YY LD P D YD++ L+AL+ PEL D P VG Sbjct: 8 IKYLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALERNHPELKLPDSPTQRVG 63 >gi|78185772|ref|YP_378206.1| NAD-dependent DNA ligase LigA [Synechococcus sp. CC9902] gi|123743489|sp|Q3AUH7|DNLJ_SYNS9 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|78170066|gb|ABB27163.1| DNA ligase (NAD+) [Synechococcus sp. CC9902] Length = 680 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + E E+ L+ A H YY LD P D +YDR+ + L L++ P L D P Sbjct: 4 QSERATELRNLLNTAAHA---YYVLDTPTMEDAVYDRLYQELLELEQNTPSLKTADSPTQ 60 Query: 116 TVG 118 VG Sbjct: 61 RVG 63 >gi|23098215|ref|NP_691681.1| NAD-dependent DNA ligase LigA [Oceanobacillus iheyensis HTE831] gi|81741485|sp|Q8CXK6|DNLJ_OCEIH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|22776440|dbj|BAC12716.1| DNA ligase (polydeoxyribonucleotide synthase[NAD+]) [Oceanobacillus iheyensis HTE831] Length = 667 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++K + ++E L+++ + YY LD+P D YD+ L L++ FP+L E+ P Sbjct: 1 MNKEQVSKKIESLIELLNQYGYEYYVLDNPTVPDAEYDQKLRELQQLEQDFPDLVMENSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|257054924|ref|YP_003132756.1| NAD-dependent DNA ligase LigA [Saccharomonospora viridis DSM 43017] gi|256584796|gb|ACU95929.1| DNA ligase, NAD-dependent [Saccharomonospora viridis DSM 43017] Length = 731 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY LD P +D +D++ L+ L+ + P L D P TVG Sbjct: 60 HQFRYYVLDAPTISDAEFDQLMRDLERLEAEHPALVSPDSPTQTVG 105 >gi|120602092|ref|YP_966492.1| DNA ligase, NAD-dependent [Desulfovibrio vulgaris DP4] gi|166215378|sp|A1VC99|DNLJ1_DESVV RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 1 gi|120562321|gb|ABM28065.1| DNA ligase, NAD-dependent [Desulfovibrio vulgaris DP4] Length = 680 Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H + YY LD P +D YD + L L+ +P L DE P VG Sbjct: 21 HNRLYYELDTPEISDAEYDTLYRELVNLETLWPALMDEASPTQRVG 66 >gi|111023430|ref|YP_706402.1| NAD-dependent DNA ligase LigA [Rhodococcus jostii RHA1] gi|123045472|sp|Q0S2J2|DNLJ_RHOSR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|110822960|gb|ABG98244.1| DNA ligase (NAD+) [Rhodococcus jostii RHA1] Length = 696 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ +DG +D + L+ L+ Q+P+L D P VG Sbjct: 28 QHQFRYYVRDAPIISDGEFDVLLGELNDLENQYPDLRTPDSPTQLVG 74 >gi|187734527|ref|YP_001876639.1| DNA ligase, NAD-dependent [Akkermansia muciniphila ATCC BAA-835] gi|254781249|sp|B2UL69|DNLJ_AKKM8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|187424579|gb|ACD03858.1| DNA ligase, NAD-dependent [Akkermansia muciniphila ATCC BAA-835] Length = 794 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++YL H + YY +P +D YD + L+ L++ PEL D D P VG Sbjct: 49 IDYLRSELRRHNRLYYEQAEPEISDAEYDALFLELEKLEKAHPELSDPDSPTRRVG 104 >gi|170739961|ref|YP_001768616.1| DNA ligase, NAD-dependent [Methylobacterium sp. 4-46] gi|254781369|sp|B0UQ51|DNLJ_METS4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|168194235|gb|ACA16182.1| DNA ligase, NAD-dependent [Methylobacterium sp. 4-46] Length = 827 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 24/35 (68%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 H + Y+ D P+ +D YD + RL+A++E+FP+L Sbjct: 31 HDRRYHGEDAPIISDAAYDSLRRRLEAIEERFPDL 65 >gi|238020272|ref|ZP_04600698.1| hypothetical protein GCWU000324_00147 [Kingella oralis ATCC 51147] gi|237868666|gb|EEP69670.1| hypothetical protein GCWU000324_00147 [Kingella oralis ATCC 51147] Length = 797 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ ++P+ + P N VG Sbjct: 41 YYTLDAPTVPDSEYDRLYRELEALETEYPQFRLPESPTNRVG 82 >gi|86157121|ref|YP_463906.1| DNA ligase, NAD-dependent [Anaeromyxobacter dehalogenans 2CP-C] gi|123723230|sp|Q2INT9|DNLJ_ANADE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|85773632|gb|ABC80469.1| DNA ligase, NAD-dependent [Anaeromyxobacter dehalogenans 2CP-C] Length = 687 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 22/41 (53%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY LD P+ D YDR+ L A++ + PEL D P V Sbjct: 24 YYVLDQPVLADAEYDRLMHELQAIEAEHPELVTADSPTQRV 64 >gi|15965917|ref|NP_386270.1| NAD-dependent DNA ligase LigA [Sinorhizobium meliloti 1021] gi|307308227|ref|ZP_07587936.1| DNA ligase, NAD-dependent [Sinorhizobium meliloti BL225C] gi|307319694|ref|ZP_07599119.1| DNA ligase, NAD-dependent [Sinorhizobium meliloti AK83] gi|81634276|sp|Q92NM8|DNLJ_RHIME RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|15075186|emb|CAC46743.1| Probable DNA ligase [Sinorhizobium meliloti 1021] gi|306894625|gb|EFN25386.1| DNA ligase, NAD-dependent [Sinorhizobium meliloti AK83] gi|306901225|gb|EFN31831.1| DNA ligase, NAD-dependent [Sinorhizobium meliloti BL225C] Length = 717 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 38/74 (51%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 L++ K V L++ EA E+ +L H Y+ D P +D YD + R D ++E+F Sbjct: 2 LNQRKSVEQLNEAEAAEELAFLAAELARHDMLYHGKDAPEISDADYDALKRRNDLIEERF 61 Query: 105 PELFDEDHPWNTVG 118 P L ED P VG Sbjct: 62 PVLVREDSPSRKVG 75 >gi|212638096|ref|YP_002314616.1| NAD-dependent DNA ligase LigA [Anoxybacillus flavithermus WK1] gi|254781544|sp|B7GFV1|DNLJ_ANOFW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|212559576|gb|ACJ32631.1| NAD-dependent DNA ligase [Anoxybacillus flavithermus WK1] Length = 672 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P +D YD + +L L+EQ+P+ D P VG Sbjct: 23 HNYAYYVLDQPSISDAEYDELMRKLMELEEQYPQYKTPDSPSQRVG 68 >gi|329297490|ref|ZP_08254826.1| NAD-dependent DNA ligase LigA [Plautia stali symbiont] Length = 672 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ P+L D P VG Sbjct: 17 HHEYLYHVMDTPEIPDAEYDRLMRELRELESAHPDLITPDSPTQRVG 63 >gi|283850424|ref|ZP_06367713.1| DNA ligase, NAD-dependent [Desulfovibrio sp. FW1012B] gi|283574450|gb|EFC22421.1| DNA ligase, NAD-dependent [Desulfovibrio sp. FW1012B] Length = 697 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 22/46 (47%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LDDP D YD + L L+ PEL D + P VG Sbjct: 22 HNHRYYVLDDPQIEDAAYDALYRELVTLEAAHPELADPNSPTRRVG 67 >gi|332176597|gb|AEE12287.1| DNA ligase [Porphyromonas asaccharolytica DSM 20707] Length = 679 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ +E+E L H + YY + P +D YD + +RL L+ + PEL D P Sbjct: 1 MTRNNTELEIEQLRTTIEQHNRAYYLDNAPTISDADYDALMQRLLTLEAEHPELADPTSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SLRVG 65 >gi|313886637|ref|ZP_07820349.1| DNA ligase (NAD+) [Porphyromonas asaccharolytica PR426713P-I] gi|312923933|gb|EFR34730.1| DNA ligase (NAD+) [Porphyromonas asaccharolytica PR426713P-I] Length = 679 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ +E+E L H + YY + P +D YD + +RL L+ + PEL D P Sbjct: 1 MTRNNTELEIEQLRTTIEQHNRAYYLDNAPTISDADYDALMQRLLTLEAEHPELADPTSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SLRVG 65 >gi|78047224|ref|YP_363399.1| NAD-dependent DNA ligase LigA [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123744002|sp|Q3BV14|DNLJ_XANC5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|78035654|emb|CAJ23345.1| DNA ligase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 833 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 24/43 (55%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 Y+ LD+P D YD++ L+AL+ PEL D P VG+ Sbjct: 25 YHVLDEPQMADADYDKLMRELEALERAHPELASADSPTQRVGH 67 >gi|188533249|ref|YP_001907046.1| NAD-dependent DNA ligase LigA [Erwinia tasmaniensis Et1/99] gi|254781330|sp|B2VE40|DNLJ_ERWT9 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|188028291|emb|CAO96149.1| DNA ligase [Erwinia tasmaniensis Et1/99] Length = 670 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 28/57 (49%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +L + H++ Y+ LD P D YDR+ L L+ PEL D P VG Sbjct: 7 KITHLRTLLRHYEYQYHVLDAPAVPDAEYDRLMGELRELEAAHPELLTTDSPTQRVG 63 >gi|313890529|ref|ZP_07824157.1| DNA ligase (NAD+) [Streptococcus pseudoporcinus SPIN 20026] gi|313121046|gb|EFR44157.1| DNA ligase (NAD+) [Streptococcus pseudoporcinus SPIN 20026] Length = 652 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 28/47 (59%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ YY D+P +D YD++ L AL+ ++PEL +D P VG Sbjct: 14 QYRQEYYTNDNPTVSDQEYDKLYHELLALETEYPELIQKDSPTQGVG 60 >gi|327475239|gb|AEA77214.1| DNA ligase [Bacillus sp. 15.4] Length = 668 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD P D YDRV L A++ +FPEL D P VG Sbjct: 24 YHVLDKPSVPDAEYDRVMNELIAIENKFPELRTADSPTQRVG 65 >gi|325928155|ref|ZP_08189364.1| DNA ligase, NAD-dependent [Xanthomonas perforans 91-118] gi|325541451|gb|EGD12984.1| DNA ligase, NAD-dependent [Xanthomonas perforans 91-118] Length = 833 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 24/43 (55%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 Y+ LD+P D YD++ L+AL+ PEL D P VG+ Sbjct: 25 YHVLDEPQMADADYDKLMRELEALERAHPELASADSPTQRVGH 67 >gi|269123713|ref|YP_003306290.1| DNA ligase, NAD-dependent [Streptobacillus moniliformis DSM 12112] gi|268315039|gb|ACZ01413.1| DNA ligase, NAD-dependent [Streptobacillus moniliformis DSM 12112] Length = 675 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 3/52 (5%) Query: 67 VKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++I HH YY LD+ L TD YD + ++++ L+++FPEL ++ P +G Sbjct: 23 IEIYNHH---YYNLDESLITDREYDALLKKIELLEKEFPELKLKNSPTEIIG 71 >gi|119487266|ref|ZP_01621017.1| DNA ligase [Lyngbya sp. PCC 8106] gi|119455821|gb|EAW36956.1| DNA ligase [Lyngbya sp. PCC 8106] Length = 685 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P+ D +YD++ L L+ +P+L D P VG Sbjct: 26 YYVLDAPIIEDAIYDQLYRELQQLETDYPQLITPDSPTQRVG 67 >gi|21242377|ref|NP_641959.1| NAD-dependent DNA ligase LigA [Xanthomonas axonopodis pv. citri str. 306] gi|81803317|sp|Q8PM07|DNLJ_XANAC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|21107814|gb|AAM36495.1| DNA ligase [Xanthomonas axonopodis pv. citri str. 306] Length = 833 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 24/43 (55%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 Y+ LD+P D YD++ L+AL+ PEL D P VG+ Sbjct: 25 YHVLDEPQMADADYDKLMRELEALERAHPELASADSPTQRVGH 67 >gi|332044217|gb|EGI80411.1| DNA ligase, NAD-dependent [Lacinutrix algicola 5H-3-7-4] Length = 665 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+E L + H YY LD+P +D +D + L AL+E PE FD + P VG Sbjct: 6 EIEQLRQELREHNYNYYVLDNPTISDYDFDIKLKELQALEEAHPEFFDANSPTLRVG 62 >gi|299535244|ref|ZP_07048568.1| DNA ligase [Lysinibacillus fusiformis ZC1] gi|298729365|gb|EFI69916.1| DNA ligase [Lysinibacillus fusiformis ZC1] Length = 667 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P+ D +YD++ + L AL+E P L D P VG Sbjct: 22 YYVLDKPVVADSVYDQLLQELIALEEANPSLIYPDSPTQRVG 63 >gi|294665962|ref|ZP_06731226.1| DNA ligase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604265|gb|EFF47652.1| DNA ligase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 833 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 24/43 (55%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 Y+ LD+P D YD++ L+AL+ PEL D P VG+ Sbjct: 25 YHVLDEPQMADADYDKLMRELEALERAHPELASADSPTQRVGH 67 >gi|294626370|ref|ZP_06704972.1| DNA ligase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599371|gb|EFF43506.1| DNA ligase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 833 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 24/43 (55%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 Y+ LD+P D YD++ L+AL+ PEL D P VG+ Sbjct: 25 YHVLDEPQMADADYDKLMRELEALERAHPELASADSPTQRVGH 67 >gi|326317205|ref|YP_004234877.1| DNA ligase, NAD-dependent [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374041|gb|ADX46310.1| DNA ligase, NAD-dependent [Acidovorax avenae subsp. avenae ATCC 19860] Length = 732 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 HQ YY LD P D YDRV + L AL+ PEL D P V Sbjct: 35 HQ--YYVLDAPTVPDAEYDRVFQALQALEAAHPELVTPDSPTQRV 77 >gi|261493319|ref|ZP_05989845.1| NAD-dependent DNA ligase LigA [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261310963|gb|EEY12140.1| NAD-dependent DNA ligase LigA [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 685 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + ++E + + ++ Y+ LD+P D YDR+ L L+ Q PEL D P V Sbjct: 17 ELVEKIETIRQTLRQYEYEYHVLDNPSVPDAEYDRLMNELKNLEWQHPELISADSPTQRV 76 Query: 118 G 118 G Sbjct: 77 G 77 >gi|269792727|ref|YP_003317631.1| DNA ligase, NAD-dependent [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100362|gb|ACZ19349.1| DNA ligase, NAD-dependent [Thermanaerovibrio acidaminovorans DSM 6589] Length = 673 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + A +E L ++ HH + YY+ + P TD YD + L L+ FP+L D P Sbjct: 1 MDRSAARSRMEELAELIRHHDRLYYQENSPEITDQEYDALFRELVDLERSFPDLRLPDSP 60 >gi|217077826|ref|YP_002335544.1| DNA ligase, NAD-dependent [Thermosipho africanus TCF52B] gi|254781437|sp|B7IDX6|DNLJ_THEAB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|217037681|gb|ACJ76203.1| DNA ligase, NAD-dependent [Thermosipho africanus TCF52B] Length = 665 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 7/57 (12%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+EY H YY L DP+ +D YD++ ++L L++++PE + P VG Sbjct: 16 EIEY-------HNYRYYVLADPVISDEEYDKLLKKLIELEKKYPEFYSPTSPTQKVG 65 >gi|254360665|ref|ZP_04976814.1| DNA ligase (NAD(+)) [Mannheimia haemolytica PHL213] gi|153091205|gb|EDN73210.1| DNA ligase (NAD(+)) [Mannheimia haemolytica PHL213] Length = 685 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + ++E + + ++ Y+ LD+P D YDR+ L L+ Q PEL D P V Sbjct: 17 ELVEKIETIRQTLRQYEYEYHVLDNPSVPDAEYDRLMNELKNLEWQHPELISADSPTQRV 76 Query: 118 G 118 G Sbjct: 77 G 77 >gi|120611505|ref|YP_971183.1| DNA ligase [Acidovorax citrulli AAC00-1] gi|166215380|sp|A1TR21|DNLJ_ACIAC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|120589969|gb|ABM33409.1| DNA ligase, NAD-dependent [Acidovorax citrulli AAC00-1] Length = 732 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 HQ YY LD P D YDRV + L AL+ PEL D P V Sbjct: 35 HQ--YYVLDAPTVPDAEYDRVFQALQALETAHPELVTPDSPTQRV 77 >gi|325913348|ref|ZP_08175716.1| DNA ligase (NAD+) [Lactobacillus iners UPII 60-B] gi|325477451|gb|EGC80595.1| DNA ligase (NAD+) [Lactobacillus iners UPII 60-B] Length = 672 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 ++ LS +A +EV L K YY D P+ D +YD+V ++L L++++P L D Sbjct: 1 MSELSLAQAKLEVLKLRKQLDSWAYAYYVQDAPVVEDNIYDQVYQQLLELEQKYPVLLDP 60 Query: 111 DHPWNTVG 118 D VG Sbjct: 61 DSITQRVG 68 >gi|261496584|ref|ZP_05992964.1| NAD-dependent DNA ligase LigA [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307787|gb|EEY09110.1| NAD-dependent DNA ligase LigA [Mannheimia haemolytica serotype A2 str. OVINE] Length = 685 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + ++E + + ++ Y+ LD+P D YDR+ L L+ Q PEL D P V Sbjct: 17 ELVEKIETIRQTLRQYEYEYHVLDNPSVPDAEYDRLMNELKNLEWQHPELISADSPTQRV 76 Query: 118 G 118 G Sbjct: 77 G 77 >gi|91775756|ref|YP_545512.1| DNA ligase, NAD-dependent [Methylobacillus flagellatus KT] gi|123254532|sp|Q1H1G6|DNLJ_METFK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|91709743|gb|ABE49671.1| DNA ligase, NAD-dependent [Methylobacillus flagellatus KT] Length = 693 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 27/57 (47%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +VE L + YY L+ P D YDRV L AL++ PEL D P VG Sbjct: 20 KVEALRATIRRYDYEYYVLNAPSVPDSEYDRVFRELKALEDAHPELVTPDSPTQRVG 76 >gi|311898479|dbj|BAJ30887.1| putative DNA ligase [Kitasatospora setae KM-6054] Length = 788 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 8/78 (10%) Query: 41 LESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +E W D +V + E E+E H+ YY D P+ TD +D + L+AL Sbjct: 1 MEGWEDVPAEVRT-RHAELATEIE-------EHRSRYYEQDAPVVTDAEFDALMRELEAL 52 Query: 101 QEQFPELFDEDHPWNTVG 118 + P L D P VG Sbjct: 53 EAAHPALATPDSPTRKVG 70 >gi|119898292|ref|YP_933505.1| DNA ligase (NAD+) [Azoarcus sp. BH72] gi|166215393|sp|A1K713|DNLJ_AZOSB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|119670705|emb|CAL94618.1| DNA ligase (NAD+) [Azoarcus sp. BH72] Length = 693 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 21/46 (45%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P D YDR+ L ++ PEL D P VG Sbjct: 21 HNHAYYVLDTPTIPDAEYDRLFRELQDIEAAHPELLTPDSPTQRVG 66 >gi|108759370|ref|YP_633776.1| NAD-dependent DNA ligase [Myxococcus xanthus DK 1622] gi|123074067|sp|Q1D0P7|DNLJ_MYXXD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|108463250|gb|ABF88435.1| DNA ligase, NAD-dependent [Myxococcus xanthus DK 1622] Length = 672 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY LD P +D YD++ L L+ + P L D P VG Sbjct: 20 HHNYRYYVLDSPEVSDAQYDKLMRELQDLEAKHPSLQTPDSPTQRVG 66 >gi|229846132|ref|ZP_04466244.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae 7P49H1] gi|229811136|gb|EEP46853.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae 7P49H1] Length = 670 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 7 QLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|319776649|ref|YP_004139137.1| DNA ligase, NAD(+)-dependent [Haemophilus influenzae F3047] gi|329124164|ref|ZP_08252711.1| NAD-dependent DNA ligase LigA [Haemophilus aegyptius ATCC 11116] gi|317451240|emb|CBY87473.1| DNA ligase, NAD(+)-dependent [Haemophilus influenzae F3047] gi|327467589|gb|EGF13087.1| NAD-dependent DNA ligase LigA [Haemophilus aegyptius ATCC 11116] Length = 670 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 7 QLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|254670337|emb|CBA05747.1| DNA ligase [Neisseria meningitidis alpha153] Length = 841 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALERNHPELKLPDSPTQRVG 85 >gi|149183793|ref|ZP_01862194.1| NAD-dependent DNA ligase LigA [Bacillus sp. SG-1] gi|148848496|gb|EDL62745.1| NAD-dependent DNA ligase LigA [Bacillus sp. SG-1] Length = 668 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD P D YDRV L A++ +FPEL D P VG Sbjct: 24 YHVLDKPSVPDAEYDRVMNELIAIETEFPELRTPDSPTQRVG 65 >gi|325141882|gb|EGC64324.1| DNA ligase, NAD-dependent [Neisseria meningitidis 961-5945] Length = 841 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALERNHPELKLPDSPTQRVG 85 >gi|319897423|ref|YP_004135620.1| DNA ligase, nad(+)-dependent [Haemophilus influenzae F3031] gi|317432929|emb|CBY81295.1| DNA ligase, NAD(+)-dependent [Haemophilus influenzae F3031] Length = 679 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 16 QLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 72 >gi|309782142|ref|ZP_07676872.1| DNA ligase, NAD-dependent [Ralstonia sp. 5_7_47FAA] gi|308919208|gb|EFP64875.1| DNA ligase, NAD-dependent [Ralstonia sp. 5_7_47FAA] Length = 813 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ + PEL D P VG Sbjct: 31 YYVLDQPSVPDAEYDRLYRELEALEAEHPELKTPDSPTLRVG 72 >gi|260581847|ref|ZP_05849643.1| DNA ligase, NAD-dependent [Haemophilus influenzae NT127] gi|260095040|gb|EEW78932.1| DNA ligase, NAD-dependent [Haemophilus influenzae NT127] Length = 679 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 16 QLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 72 >gi|148826285|ref|YP_001291038.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae PittEE] gi|166215778|sp|A5UD04|DNLJ_HAEIE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|148716445|gb|ABQ98655.1| DNA ligase [Haemophilus influenzae PittEE] Length = 670 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 7 QLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|145636448|ref|ZP_01792116.1| DNA ligase [Haemophilus influenzae PittHH] gi|145270273|gb|EDK10208.1| DNA ligase [Haemophilus influenzae PittHH] Length = 670 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 7 QLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|161761269|ref|YP_248767.2| NAD-dependent DNA ligase LigA [Haemophilus influenzae 86-028NP] gi|166215835|sp|Q4QLJ0|DNLJ_HAEI8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|309973429|gb|ADO96630.1| NAD-dependent DNA ligase [Haemophilus influenzae R2846] Length = 670 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 7 QLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|218767787|ref|YP_002342299.1| putative DNA ligase [Neisseria meningitidis Z2491] gi|166216217|sp|A1IQR7|DNLJ_NEIMA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|121051795|emb|CAM08101.1| putative DNA ligase [Neisseria meningitidis Z2491] gi|319410038|emb|CBY90372.1| DNA ligase (polydeoxyribonucleotide synthase [NAD+]) [Neisseria meningitidis WUE 2594] Length = 841 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALERNHPELKLPDSPTQRVG 85 >gi|30995424|ref|NP_439257.2| NAD-dependent DNA ligase LigA [Haemophilus influenzae Rd KW20] gi|145638086|ref|ZP_01793696.1| DNA ligase [Haemophilus influenzae PittII] gi|166214918|sp|P43813|DNLJ_HAEIN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145272415|gb|EDK12322.1| DNA ligase [Haemophilus influenzae PittII] gi|309751252|gb|ADO81236.1| NAD-dependent DNA ligase [Haemophilus influenzae R2866] Length = 670 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 7 QLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|166216290|sp|Q0AHH6|DNLJ_NITEC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 683 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 69 IALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 IALH YY D P+ D YD++ L L++Q+P L D P VG Sbjct: 18 IALHDFH-YYVQDAPIIPDADYDKLFRTLQQLEQQYPHLITPDSPTQRVG 66 >gi|148828262|ref|YP_001293015.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae PittGG] gi|166215779|sp|A5UIM6|DNLJ_HAEIG RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|148719504|gb|ABR00632.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae PittGG] Length = 670 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 7 QLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|254383201|ref|ZP_04998554.1| DNA ligase [Streptomyces sp. Mg1] gi|194342099|gb|EDX23065.1| DNA ligase [Streptomyces sp. Mg1] Length = 736 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 27/46 (58%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H+ YY D P+ +D +D++ L+AL+EQ+P+L D P V Sbjct: 31 HRFRYYVNDQPVVSDAEFDQLLRSLEALEEQYPQLRTPDSPTQKVA 76 >gi|188997338|ref|YP_001931589.1| DNA ligase, NAD-dependent [Sulfurihydrogenibium sp. YO3AOP1] gi|254781435|sp|B2V5U1|DNLJ_SULSY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|188932405|gb|ACD67035.1| DNA ligase, NAD-dependent [Sulfurihydrogenibium sp. YO3AOP1] Length = 704 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 12/98 (12%) Query: 20 TPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYR 79 T + K+L+ L +FL LD K L+K EA VE L ++ H YY Sbjct: 3 TDERQKELIKLTYEFLK--------LDAKK----LTKEEAKKIVEDLREVIRFHDWRYYV 50 Query: 80 LDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 L P+ +D YD++ + L ++ ++PEL D P V Sbjct: 51 LAQPVISDYEYDKLFKLLKDIEGKYPELITPDSPTQRV 88 >gi|254804544|ref|YP_003082765.1| DNA ligase [Neisseria meningitidis alpha14] gi|254668086|emb|CBA04596.1| DNA ligase [Neisseria meningitidis alpha14] Length = 841 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALERNHPELKLPDSPTQRVG 85 >gi|88810628|ref|ZP_01125885.1| DNA ligase, NAD-dependent [Nitrococcus mobilis Nb-231] gi|88792258|gb|EAR23368.1| DNA ligase, NAD-dependent [Nitrococcus mobilis Nb-231] Length = 672 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LDDP +D YD + L AL+ P+L D P VG Sbjct: 22 QHNYRYFVLDDPQVSDADYDVLMRELQALEADHPDLVSPDSPTQRVG 68 >gi|157374877|ref|YP_001473477.1| DNA ligase (NAD(+)) [Shewanella sediminis HAW-EB3] gi|190359288|sp|A8FU26|DNLJ_SHESH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157317251|gb|ABV36349.1| DNA ligase (NAD(+)) [Shewanella sediminis HAW-EB3] Length = 670 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 27/57 (47%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E++ L + H YY D P D YDR+ RL L+ + PEL D P VG Sbjct: 7 EIKQLTSVLNEHNYRYYVDDAPSVPDAEYDRLINRLKQLEAENPELCLPDSPTQRVG 63 >gi|320334549|ref|YP_004171260.1| DNA ligase [Deinococcus maricopensis DSM 21211] gi|319755838|gb|ADV67595.1| DNA ligase [Deinococcus maricopensis DSM 21211] Length = 671 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 60 MIEVEY--LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 M E Y L++ HH + YY D P +D YD + L A + PE + P V Sbjct: 1 MTEARYRELIQTIQHHNRLYYEQDTPEISDAEYDALMRELRAAEAAHPEWITPESPTQKV 60 Query: 118 G 118 G Sbjct: 61 G 61 >gi|167631047|ref|YP_001681546.1| DNA ligase, nad-dependent [Heliobacterium modesticaldum Ice1] gi|254781344|sp|B0TDL0|DNLJ_HELMI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|167593787|gb|ABZ85535.1| DNA ligase, nad-dependent [Heliobacterium modesticaldum Ice1] Length = 675 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P +D YDR+ L L++ PEL D P VG Sbjct: 27 HDYCYYVLDAPEISDAEYDRLMRELLDLEQSHPELVTADSPSQRVG 72 >gi|145630192|ref|ZP_01785974.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae R3021] gi|144984473|gb|EDJ91896.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae R3021] Length = 670 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 7 QLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|260580185|ref|ZP_05848015.1| DNA ligase, NAD-dependent [Haemophilus influenzae RdAW] gi|1574651|gb|AAC22753.1| DNA ligase (lig) [Haemophilus influenzae Rd KW20] gi|260093469|gb|EEW77402.1| DNA ligase, NAD-dependent [Haemophilus influenzae RdAW] Length = 679 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 16 QLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 72 >gi|114330949|ref|YP_747171.1| DNA ligase, NAD-dependent [Nitrosomonas eutropha C91] gi|114307963|gb|ABI59206.1| DNA ligase, NAD-dependent [Nitrosomonas eutropha C91] Length = 715 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 69 IALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 IALH +Y + D P+ D YD++ L L++Q+P L D P VG Sbjct: 50 IALHDFHYYVQ-DAPIIPDADYDKLFRTLQQLEQQYPHLITPDSPTQRVG 98 >gi|297544111|ref|YP_003676413.1| DNA ligase, NAD-dependent [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841886|gb|ADH60402.1| DNA ligase, NAD-dependent [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 662 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 68 KIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 KI H+ K YY LD P +D YD + L L+E++PEL D P VG Sbjct: 13 KINYHNYK-YYVLDQPEISDYEYDMLMRELIELEEKYPELKTPDSPSQRVG 62 >gi|207723346|ref|YP_002253745.1| dna ligase (polydeoxyribonucleotide synthase [nad+]) (partial sequence n terminus) protein [Ralstonia solanacearum MolK2] gi|206588545|emb|CAQ35508.1| probable dna ligase (polydeoxyribonucleotide synthase [nad+]) (partial sequence n terminus) protein [Ralstonia solanacearum MolK2] Length = 568 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ + PEL D P VG Sbjct: 31 YYVLDQPSVPDAEYDRLYRALEALEAEHPELRTPDSPTLRVG 72 >gi|195940543|ref|ZP_03085925.1| NAD-dependent DNA ligase LigA [Escherichia coli O157:H7 str. EC4024] Length = 98 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|68057854|gb|AAX88107.1| DNA ligase [Haemophilus influenzae 86-028NP] Length = 679 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 16 QLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 72 >gi|83748812|ref|ZP_00945825.1| NAD-dependent DNA ligase [Ralstonia solanacearum UW551] gi|207743250|ref|YP_002259642.1| dna ligase (polydeoxyribonucleotide synthase [nad+]) protein [Ralstonia solanacearum IPO1609] gi|83724504|gb|EAP71669.1| NAD-dependent DNA ligase [Ralstonia solanacearum UW551] gi|206594647|emb|CAQ61574.1| dna ligase (polydeoxyribonucleotide synthase [nad+]) protein [Ralstonia solanacearum IPO1609] Length = 813 Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ + PEL D P VG Sbjct: 31 YYVLDQPSVPDAEYDRLYRALEALEAEHPELRTPDSPTLRVG 72 >gi|221632243|ref|YP_002521464.1| DNA ligase, NAD-dependent [Thermomicrobium roseum DSM 5159] gi|254781441|sp|B9KXM2|DNLJ_THERP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|221155911|gb|ACM05038.1| DNA ligase, NAD-dependent [Thermomicrobium roseum DSM 5159] Length = 695 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E VE L ++ + YY L+ P +D YD + L +EQ+PEL D P V Sbjct: 15 EVRARVEELRRLIQRYNYEYYVLNAPTVSDAEYDALMLELRRWEEQYPELVTPDSPTQRV 74 Query: 118 G 118 G Sbjct: 75 G 75 >gi|241662937|ref|YP_002981297.1| DNA ligase [Ralstonia pickettii 12D] gi|240864964|gb|ACS62625.1| DNA ligase, NAD-dependent [Ralstonia pickettii 12D] Length = 813 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ + PEL D P VG Sbjct: 31 YYVLDQPSVPDAEYDRLYRELEALEAEHPELKTPDSPTLRVG 72 >gi|317401960|gb|EFV82562.1| DNA ligase [Achromobacter xylosoxidans C54] Length = 699 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 22/47 (46%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY DDP +D YDR+ L L+ PEL + P VG Sbjct: 22 QHNVRYYVYDDPSISDAEYDRLMRELQDLEAAHPELVTPESPTQRVG 68 >gi|309808880|ref|ZP_07702761.1| DNA ligase (NAD+) [Lactobacillus iners LactinV 01V1-a] gi|308167878|gb|EFO70015.1| DNA ligase (NAD+) [Lactobacillus iners LactinV 01V1-a] Length = 672 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 ++ LS +A +EV L K YY D P+ D +YD+V ++L L++++P L D Sbjct: 1 MSELSLAQAKLEVLKLRKQLDSWAYAYYVQDAPVVEDNIYDQVYQQLLELEQKYPVLIDP 60 Query: 111 DHPWNTVG 118 D VG Sbjct: 61 DSITQRVG 68 >gi|224437677|ref|ZP_03658624.1| NAD-dependent DNA ligase LigA [Helicobacter cinaedi CCUG 18818] gi|313144124|ref|ZP_07806317.1| DNA ligase [Helicobacter cinaedi CCUG 18818] gi|313129155|gb|EFR46772.1| DNA ligase [Helicobacter cinaedi CCUG 18818] Length = 651 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ E ++ L K+A H YY LDDP+ TD YD + ++ + Q P L + P Sbjct: 1 MTQQEYSSNIQKLTKMAYH----YYVLDDPIATDSQYDELYHQVLNFERQNPILISPNSP 56 Query: 114 WNTVG 118 VG Sbjct: 57 TQRVG 61 >gi|157961514|ref|YP_001501548.1| DNA ligase, NAD-dependent [Shewanella pealeana ATCC 700345] gi|190359287|sp|A8H376|DNLJ_SHEPA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157846514|gb|ABV87013.1| DNA ligase, NAD-dependent [Shewanella pealeana ATCC 700345] Length = 668 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 25/57 (43%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L H YY D P D YDR+ RL AL+ + PE D P VG Sbjct: 7 EIAQLTAELNQHNYRYYVDDSPSIPDAEYDRLLNRLKALETEHPEFCRPDSPTQRVG 63 >gi|312875390|ref|ZP_07735394.1| DNA ligase (NAD+) [Lactobacillus iners LEAF 2053A-b] gi|311089053|gb|EFQ47493.1| DNA ligase (NAD+) [Lactobacillus iners LEAF 2053A-b] Length = 672 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 ++ LS +A +EV L K YY D P+ D +YD+V ++L L++++P L D Sbjct: 1 MSELSLAQAKLEVLKLRKQLDSWAYAYYVQDAPVVEDNIYDQVYQQLLELEQKYPVLIDP 60 Query: 111 DHPWNTVG 118 D VG Sbjct: 61 DSITQRVG 68 >gi|16125769|ref|NP_420333.1| DNA ligase, NAD-dependent [Caulobacter crescentus CB15] gi|221234527|ref|YP_002516963.1| NAD-dependent DNA ligase [Caulobacter crescentus NA1000] gi|81535469|sp|Q9A842|DNLJ_CAUCR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781280|sp|B8H5Y7|DNLJ_CAUCN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|13422903|gb|AAK23501.1| DNA ligase, NAD-dependent [Caulobacter crescentus CB15] gi|220963699|gb|ACL95055.1| NAD-dependent DNA ligase [Caulobacter crescentus NA1000] Length = 783 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ +A+ ++E L + H Y++ D+P +D YD + R ++ +FP L + Sbjct: 6 VADLTEAQAVEDLERLADLLATHDIAYHQEDNPTVSDAEYDALKRRNLDIETRFPHLVRD 65 Query: 111 DHPWNTVG 118 + P VG Sbjct: 66 NSPSMRVG 73 >gi|146293460|ref|YP_001183884.1| DNA ligase, NAD-dependent [Shewanella putrefaciens CN-32] gi|166216243|sp|A4Y802|DNLJ_SHEPC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145565150|gb|ABP76085.1| DNA ligase, NAD-dependent [Shewanella putrefaciens CN-32] Length = 685 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D P TD YDR+ + L L+ QFP+ D P VG Sbjct: 33 HNIRYYVDDAPTITDSEYDRLMQCLIKLEAQFPQFIVADSPTQRVG 78 >gi|158312936|ref|YP_001505444.1| DNA ligase, NAD-dependent [Frankia sp. EAN1pec] gi|254781334|sp|A8L538|DNLJ_FRASN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|158108341|gb|ABW10538.1| DNA ligase, NAD-dependent [Frankia sp. EAN1pec] Length = 703 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P D YD + L+A++E+ PEL D P V Sbjct: 40 HAYRYYVLDKPTVADAEYDALMRELEAIEERHPELRTPDSPTQKVA 85 >gi|329920507|ref|ZP_08277239.1| DNA ligase (NAD+) [Lactobacillus iners SPIN 1401G] gi|328936183|gb|EGG32636.1| DNA ligase (NAD+) [Lactobacillus iners SPIN 1401G] Length = 672 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 ++ LS +A +EV L K YY D P+ D +YD+V ++L L++++P L D Sbjct: 1 MSELSLAQAKLEVLKLRKQLDSWAYAYYVQDAPVVEDNIYDQVYQQLLELEQKYPVLIDP 60 Query: 111 DHPWNTVG 118 D VG Sbjct: 61 DSITQRVG 68 >gi|325911416|ref|ZP_08173828.1| DNA ligase (NAD+) [Lactobacillus iners UPII 143-D] gi|325476766|gb|EGC79920.1| DNA ligase (NAD+) [Lactobacillus iners UPII 143-D] Length = 672 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 ++ LS +A +EV L K YY D P+ D +YD+V ++L L++++P L D Sbjct: 1 MSELSLAQAKLEVLKLRKQLDSWAYAYYVQDAPVVEDNIYDQVYQQLLELEQKYPVLIDP 60 Query: 111 DHPWNTVG 118 D VG Sbjct: 61 DSITQRVG 68 >gi|323705997|ref|ZP_08117567.1| DNA ligase, NAD-dependent [Thermoanaerobacterium xylanolyticum LX-11] gi|323534611|gb|EGB24392.1| DNA ligase, NAD-dependent [Thermoanaerobacterium xylanolyticum LX-11] Length = 659 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY LD P +D YD + L L+E++P+ D P VG Sbjct: 16 HHSYMYYVLDKPEISDYEYDMMMRELIELEEKYPQFKTPDSPTQRVG 62 >gi|315180839|gb|ADT87753.1| DNA ligase [Vibrio furnissii NCTC 11218] Length = 669 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 67 VKIALH-HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +K LH H YY DDP D YDR+ L L+ + PEL D P VG Sbjct: 11 LKDTLHYHAIRYYVEDDPTIPDAEYDRLMRELLDLEARHPELVTPDSPSQRVG 63 >gi|293603951|ref|ZP_06686365.1| NAD-dependent DNA ligase LigA [Achromobacter piechaudii ATCC 43553] gi|292817644|gb|EFF76711.1| NAD-dependent DNA ligase LigA [Achromobacter piechaudii ATCC 43553] Length = 700 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D+P +D YD + +L+AL+ + PEL + P VG Sbjct: 23 QHNVRYYVYDEPSISDAEYDGLMRQLEALEAEHPELITPESPTQRVG 69 >gi|258508011|ref|YP_003170762.1| NAD-dependent DNA ligase [Lactobacillus rhamnosus GG] gi|257147938|emb|CAR86911.1| NAD-dependent DNA ligase [Lactobacillus rhamnosus GG] gi|259649339|dbj|BAI41501.1| DNA ligase [Lactobacillus rhamnosus GG] Length = 674 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 31/71 (43%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 +K + EA E+ L K + YY D P TD +YD L AL+ FP+L Sbjct: 3 SKPAAQFTLEEAEAEIAKLRKQLNQWRLEYYTKDAPTVTDNVYDDHYRDLQALEAAFPKL 62 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 63 VTPDSPTQQVG 73 >gi|229551868|ref|ZP_04440593.1| DNA ligase (NAD(+)) [Lactobacillus rhamnosus LMS2-1] gi|258539286|ref|YP_003173785.1| NAD-dependent DNA ligase [Lactobacillus rhamnosus Lc 705] gi|229314812|gb|EEN80785.1| DNA ligase (NAD(+)) [Lactobacillus rhamnosus LMS2-1] gi|257150962|emb|CAR89934.1| NAD-dependent DNA ligase [Lactobacillus rhamnosus Lc 705] Length = 674 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 31/71 (43%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 +K + EA E+ L K + YY D P TD +YD L AL+ FP+L Sbjct: 3 SKPAAQFTLEEAEAEIAKLRKQLNQWRLEYYTKDAPTVTDNVYDDHYRDLQALEAAFPKL 62 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 63 VTPDSPTQQVG 73 >gi|88809499|ref|ZP_01125007.1| DNA ligase [Synechococcus sp. WH 7805] gi|88786718|gb|EAR17877.1| DNA ligase [Synechococcus sp. WH 7805] Length = 692 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E E+ L+ A H YY LD P D +YDR+ L L+ PEL + D P V Sbjct: 3 ERAAELRQLLNRAAHA---YYVLDAPDLEDAVYDRLYRELLDLESAHPELVEADSPTQRV 59 Query: 118 G 118 G Sbjct: 60 G 60 >gi|240115079|ref|ZP_04729141.1| putative DNA ligase [Neisseria gonorrhoeae PID18] gi|240125172|ref|ZP_04738058.1| putative DNA ligase [Neisseria gonorrhoeae SK-92-679] gi|240127627|ref|ZP_04740288.1| putative DNA ligase [Neisseria gonorrhoeae SK-93-1035] Length = 823 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 22 YYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 63 >gi|240013546|ref|ZP_04720459.1| putative DNA ligase [Neisseria gonorrhoeae DGI18] gi|240120618|ref|ZP_04733580.1| putative DNA ligase [Neisseria gonorrhoeae PID24-1] Length = 823 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 22 YYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 63 >gi|59800688|ref|YP_207400.1| putative DNA ligase [Neisseria gonorrhoeae FA 1090] gi|75356380|sp|Q5F9Z9|DNLJ_NEIG1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|59717583|gb|AAW88988.1| putative DNA ligase [Neisseria gonorrhoeae FA 1090] Length = 823 Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 22 YYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 63 >gi|315653834|ref|ZP_07906750.1| NAD-dependent DNA ligase LigA [Lactobacillus iners ATCC 55195] gi|315488530|gb|EFU78176.1| NAD-dependent DNA ligase LigA [Lactobacillus iners ATCC 55195] Length = 672 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 ++ LS +A +EV L K YY D P+ D +YD+V ++L L++++P L D Sbjct: 1 MSELSLAQAKLEVLKLRKQLDSWAYAYYVQDAPVVEDNIYDQVYQQLLELEQKYPVLIDP 60 Query: 111 DHPWNTVG 118 D VG Sbjct: 61 DSITQRVG 68 >gi|166032192|ref|ZP_02235021.1| hypothetical protein DORFOR_01895 [Dorea formicigenerans ATCC 27755] gi|166027915|gb|EDR46672.1| hypothetical protein DORFOR_01895 [Dorea formicigenerans ATCC 27755] Length = 690 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 3/70 (4%) Query: 52 TSLSKGEAMI--EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 T KG++M ++ LVK ++ YY D PL +D YDR+ + L L+EQ + Sbjct: 19 TPQKKGDSMSVKRIKNLVKQLNEYRHAYYNQDAPLVSDAEYDRLFDELKELEEQTGFIL- 77 Query: 110 EDHPWNTVGY 119 + P TVGY Sbjct: 78 SNSPTQTVGY 87 >gi|110637718|ref|YP_677925.1| DNA ligase [Cytophaga hutchinsonii ATCC 33406] gi|123354667|sp|Q11VI1|DNLJ_CYTH3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|110280399|gb|ABG58585.1| DNA ligase [Cytophaga hutchinsonii ATCC 33406] Length = 670 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ +A+ +E L K+ +H YY+ D +D +D + + L L++QFP D P Sbjct: 1 MNDAQALARIEELNKVLHYHNNLYYQKDTTEISDFEFDTLLQELIELEKQFPLYLKADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|213962174|ref|ZP_03390438.1| DNA ligase, NAD-dependent [Capnocytophaga sputigena Capno] gi|213955180|gb|EEB66498.1| DNA ligase, NAD-dependent [Capnocytophaga sputigena Capno] Length = 663 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 27/47 (57%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P +D +D+ + L AL++ PE +DE+ P VG Sbjct: 14 QHNYNYYILDNPTISDYEFDQKLKELQALEQAHPEFYDENSPTVRVG 60 >gi|309803834|ref|ZP_07697919.1| DNA ligase (NAD+) [Lactobacillus iners LactinV 11V1-d] gi|312870780|ref|ZP_07730886.1| DNA ligase (NAD+) [Lactobacillus iners LEAF 3008A-a] gi|312873110|ref|ZP_07733169.1| DNA ligase (NAD+) [Lactobacillus iners LEAF 2062A-h1] gi|308164068|gb|EFO66330.1| DNA ligase (NAD+) [Lactobacillus iners LactinV 11V1-d] gi|311091343|gb|EFQ49728.1| DNA ligase (NAD+) [Lactobacillus iners LEAF 2062A-h1] gi|311093656|gb|EFQ51994.1| DNA ligase (NAD+) [Lactobacillus iners LEAF 3008A-a] Length = 672 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 ++ LS +A +EV L K YY D P+ D +YD+V ++L L++++P L D Sbjct: 1 MSELSLAQAKLEVLKLRKQLDSWAYAYYVQDAPVVEDNIYDQVYQQLLELEQKYPVLIDP 60 Query: 111 DHPWNTVG 118 D VG Sbjct: 61 DSITQRVG 68 >gi|118470314|ref|YP_886705.1| NAD-dependent DNA ligase LigA [Mycobacterium smegmatis str. MC2 155] gi|166216211|sp|A0QUW7|DNLJ_MYCS2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|118171601|gb|ABK72497.1| DNA ligase, NAD-dependent [Mycobacterium smegmatis str. MC2 155] Length = 701 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ +D +D++ L AL++ PEL D P VG Sbjct: 35 HQFRYYVKDAPIISDAEFDKLLRELQALEDAHPELRTPDSPTQLVG 80 >gi|120598462|ref|YP_963036.1| DNA ligase, NAD-dependent [Shewanella sp. W3-18-1] gi|166216244|sp|A1RII7|DNLJ_SHESW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|120558555|gb|ABM24482.1| DNA ligase, NAD-dependent [Shewanella sp. W3-18-1] Length = 685 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D P TD YDR+ + L L+ QFP+ D P VG Sbjct: 33 HNIRYYVDDAPTITDSEYDRLMQCLIKLEAQFPQFIVADSPTQRVG 78 >gi|309804542|ref|ZP_07698607.1| DNA ligase (NAD+) [Lactobacillus iners LactinV 09V1-c] gi|309809394|ref|ZP_07703256.1| DNA ligase (NAD+) [Lactobacillus iners SPIN 2503V10-D] gi|312873385|ref|ZP_07733436.1| DNA ligase (NAD+) [Lactobacillus iners LEAF 2052A-d] gi|308165934|gb|EFO68152.1| DNA ligase (NAD+) [Lactobacillus iners LactinV 09V1-c] gi|308170305|gb|EFO72336.1| DNA ligase (NAD+) [Lactobacillus iners SPIN 2503V10-D] gi|311091069|gb|EFQ49462.1| DNA ligase (NAD+) [Lactobacillus iners LEAF 2052A-d] Length = 672 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 ++ LS +A +EV L K YY D P+ D +YD+V ++L L++++P L D Sbjct: 1 MSELSLAQAKLEVLKLRKQLDSWAYAYYVQDAPVVEDNIYDQVYQQLLELEQKYPVLIDP 60 Query: 111 DHPWNTVG 118 D VG Sbjct: 61 DSITQRVG 68 >gi|259501108|ref|ZP_05744010.1| DNA ligase [Lactobacillus iners DSM 13335] gi|302190444|ref|ZP_07266698.1| DNA ligase [Lactobacillus iners AB-1] gi|259167802|gb|EEW52297.1| DNA ligase [Lactobacillus iners DSM 13335] Length = 672 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 ++ LS +A +EV L K YY D P+ D +YD+V ++L L++++P L D Sbjct: 1 MSELSLAQAKLEVLKLRKQLDSWAYAYYVQDAPVVEDNIYDQVYQQLLELEQKYPVLIDP 60 Query: 111 DHPWNTVG 118 D VG Sbjct: 61 DSITQRVG 68 >gi|1816524|gb|AAB42062.1| DNA ligase [Escherichia coli] Length = 90 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVG 63 >gi|313125027|ref|YP_004035291.1| DNA ligase, NAD-dependent [Halogeometricum borinquense DSM 11551] gi|312291392|gb|ADQ65852.1| DNA ligase, NAD-dependent [Halogeometricum borinquense DSM 11551] Length = 694 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V SLS A E L + H YY DPL D YD + RL L++ F +L DE Sbjct: 27 VESLSAEAAEREARLLREAVREHDHRYYVAADPLVADRTYDALFNRLQELEDAF-DLDDE 85 Query: 111 DHPWNTVG 118 P VG Sbjct: 86 SSPTRRVG 93 >gi|254673676|emb|CBA09270.1| DNA ligase [Neisseria meningitidis alpha275] Length = 423 Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALERNHPELKLPDSPTQRVG 85 >gi|302023934|ref|ZP_07249145.1| NAD-dependent DNA ligase LigA [Streptococcus suis 05HAS68] gi|330832985|ref|YP_004401810.1| NAD-dependent DNA ligase LigA [Streptococcus suis ST3] gi|329307208|gb|AEB81624.1| NAD-dependent DNA ligase LigA [Streptococcus suis ST3] Length = 652 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + K YY+LD P +D YD + L L+ PEL D P + VG Sbjct: 5 ISELVSVLNQYAKEYYQLDQPSVSDAEYDTLYRELVELETAHPELILPDSPTHRVG 60 >gi|228469580|ref|ZP_04054573.1| DNA ligase, NAD-dependent [Porphyromonas uenonis 60-3] gi|228308930|gb|EEK17605.1| DNA ligase, NAD-dependent [Porphyromonas uenonis 60-3] Length = 679 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 29/58 (50%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E+E L K H + YY + P +D YD + +RL L+ + PE D P VG Sbjct: 8 LEIEQLRKTIEQHNRAYYLDNAPTISDADYDALMQRLLTLEAEHPEFADPTSPSLRVG 65 >gi|212703192|ref|ZP_03311320.1| hypothetical protein DESPIG_01234 [Desulfovibrio piger ATCC 29098] gi|212673458|gb|EEB33941.1| hypothetical protein DESPIG_01234 [Desulfovibrio piger ATCC 29098] Length = 729 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 24/42 (57%) Query: 65 YLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 +L I HH Y+ LD P+ +D YD + L AL+E +P+ Sbjct: 63 WLTTILEHHNYLYHTLDKPVISDDQYDALFRELKALEEDYPQ 104 >gi|149911742|ref|ZP_01900348.1| NAD-dependent DNA ligase [Moritella sp. PE36] gi|149805167|gb|EDM65187.1| NAD-dependent DNA ligase [Moritella sp. PE36] Length = 482 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +HQ YY LD+P D YDR+ L L+ +FPEL P VG Sbjct: 19 NHQ--YYVLDNPTVPDAEYDRLLRELKQLETEFPELALATSPTQKVG 63 >gi|146318834|ref|YP_001198546.1| NAD-dependent DNA ligase LigA [Streptococcus suis 05ZYH33] gi|166216250|sp|A4VVK7|DNLJ_STRSY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145689640|gb|ABP90146.1| NAD-dependent DNA ligase (contains BRCT domain type II) [Streptococcus suis 05ZYH33] Length = 652 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + K YY+LD P +D YD + L L+ PEL D P + VG Sbjct: 5 ISELVSVLNQYAKEYYQLDQPSVSDAEYDTLYRELVELETAHPELILPDSPTHRVG 60 >gi|240122918|ref|ZP_04735874.1| putative DNA ligase [Neisseria gonorrhoeae PID332] Length = 823 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 22 YYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 63 >gi|240080125|ref|ZP_04724668.1| putative DNA ligase [Neisseria gonorrhoeae FA19] gi|240117363|ref|ZP_04731425.1| putative DNA ligase [Neisseria gonorrhoeae PID1] gi|260441105|ref|ZP_05794921.1| putative DNA ligase [Neisseria gonorrhoeae DGI2] Length = 823 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 22 YYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 63 >gi|240015985|ref|ZP_04722525.1| putative DNA ligase [Neisseria gonorrhoeae FA6140] gi|240112339|ref|ZP_04726829.1| putative DNA ligase [Neisseria gonorrhoeae MS11] Length = 823 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 22 YYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 63 >gi|194097948|ref|YP_002000994.1| putative DNA ligase [Neisseria gonorrhoeae NCCP11945] gi|239998421|ref|ZP_04718345.1| putative DNA ligase [Neisseria gonorrhoeae 35/02] gi|254781380|sp|B4RJQ9|DNLJ_NEIG2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|193933238|gb|ACF29062.1| putative DNA ligase [Neisseria gonorrhoeae NCCP11945] gi|317163707|gb|ADV07248.1| putative DNA ligase [Neisseria gonorrhoeae TCDC-NG08107] Length = 823 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 22 YYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 63 >gi|81429164|ref|YP_396165.1| NAD-dependent DNA ligase [Lactobacillus sakei subsp. sakei 23K] gi|123755813|sp|Q38VC5|DNLJ_LACSS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|78610807|emb|CAI55858.1| NAD-dependent DNA ligase [Lactobacillus sakei subsp. sakei 23K] Length = 677 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 32/71 (45%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 AK V ++ EA + L + + YY D PL D +YD + L+ L+ FP + Sbjct: 4 AKLVEDYTQSEAASLAQQLRDQLADYSQAYYTQDAPLVEDHVYDELYRDLEQLEAAFPVI 63 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 64 VTNDSPTQKVG 74 >gi|86148411|ref|ZP_01066703.1| DNA ligase [Vibrio sp. MED222] gi|85833825|gb|EAQ51991.1| DNA ligase [Vibrio sp. MED222] Length = 670 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 31/63 (49%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 K + +E L + +H YY D P D YDR+ ++L L+E+ PEL D P Sbjct: 2 KESIQVTLEQLRETLHYHAVRYYVEDSPEIPDVEYDRLMQQLLKLEEENPELVTVDSPSQ 61 Query: 116 TVG 118 VG Sbjct: 62 RVG 64 >gi|268600753|ref|ZP_06134920.1| DNA ligase [Neisseria gonorrhoeae PID18] gi|268683767|ref|ZP_06150629.1| DNA ligase [Neisseria gonorrhoeae SK-92-679] gi|268686007|ref|ZP_06152869.1| DNA ligase [Neisseria gonorrhoeae SK-93-1035] gi|293399617|ref|ZP_06643770.1| DNA ligase, NAD-dependent [Neisseria gonorrhoeae F62] gi|268584884|gb|EEZ49560.1| DNA ligase [Neisseria gonorrhoeae PID18] gi|268624051|gb|EEZ56451.1| DNA ligase [Neisseria gonorrhoeae SK-92-679] gi|268626291|gb|EEZ58691.1| DNA ligase [Neisseria gonorrhoeae SK-93-1035] gi|291610186|gb|EFF39308.1| DNA ligase, NAD-dependent [Neisseria gonorrhoeae F62] Length = 829 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 28 YYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 69 >gi|322373465|ref|ZP_08048001.1| DNA ligase, NAD-dependent [Streptococcus sp. C150] gi|321278507|gb|EFX55576.1| DNA ligase, NAD-dependent [Streptococcus sp. C150] Length = 652 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + K YY D+P +D YD++ L AL+ + PEL D P + VG Sbjct: 14 QYAKEYYTEDNPSVSDAEYDKLYRELVALEAEHPELVQADSPTHRVG 60 >gi|257387145|ref|YP_003176918.1| NAD-dependent DNA ligase LigA [Halomicrobium mukohataei DSM 12286] gi|257169452|gb|ACV47211.1| DNA ligase, NAD-dependent [Halomicrobium mukohataei DSM 12286] Length = 700 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%) Query: 31 EAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLY 90 EA P+ +E + + V S EA + + L + +H YY L DP+ D Y Sbjct: 6 EATPPPDNPYVEDPPTEFEPVEDFSDDEAREQAQRLREAIRYHDHRYYVLADPVIGDRAY 65 Query: 91 DRVSERLDALQEQFPELFDEDHPWNTVG 118 D + RL+AL++ F +L E P VG Sbjct: 66 DALFARLEALEDAF-DLDREASPTQRVG 92 >gi|326797492|ref|YP_004315311.1| DNA ligase [Sphingobacterium sp. 21] gi|326548256|gb|ADZ76641.1| DNA ligase [Sphingobacterium sp. 21] Length = 672 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A+ +E L K H YY L P +D +D+ L AL++ +PE D D P Sbjct: 1 MQRNDALSRIEALTKELNDHNYKYYVLAQPSISDFDFDQKLAELAALEKDYPEFLDPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQKVG 65 >gi|146321044|ref|YP_001200755.1| NAD-dependent DNA ligase LigA [Streptococcus suis 98HAH33] gi|253751920|ref|YP_003025061.1| DNA ligase [Streptococcus suis SC84] gi|253753743|ref|YP_003026884.1| DNA ligase [Streptococcus suis P1/7] gi|253755379|ref|YP_003028519.1| DNA ligase [Streptococcus suis BM407] gi|166216248|sp|A4W1W6|DNLJ_STRS2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145691850|gb|ABP92355.1| NAD-dependent DNA ligase (contains BRCT domain type II) [Streptococcus suis 98HAH33] gi|251816209|emb|CAZ51836.1| DNA ligase [Streptococcus suis SC84] gi|251817843|emb|CAZ55596.1| DNA ligase [Streptococcus suis BM407] gi|251819989|emb|CAR46142.1| DNA ligase [Streptococcus suis P1/7] gi|292558495|gb|ADE31496.1| NAD-dependent DNA ligase [Streptococcus suis GZ1] gi|319758281|gb|ADV70223.1| NAD-dependent DNA ligase LigA [Streptococcus suis JS14] Length = 652 Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + K YY+LD P +D YD + L L+ PEL D P + VG Sbjct: 5 ISELVSVLNQYAKEYYQLDQPSVSDAEYDTLYRELVELETAHPELILPDSPTHRVG 60 >gi|268596277|ref|ZP_06130444.1| DNA ligase [Neisseria gonorrhoeae FA19] gi|268603059|ref|ZP_06137226.1| DNA ligase [Neisseria gonorrhoeae PID1] gi|291044437|ref|ZP_06570146.1| DNA ligase [Neisseria gonorrhoeae DGI2] gi|268550065|gb|EEZ45084.1| DNA ligase [Neisseria gonorrhoeae FA19] gi|268587190|gb|EEZ51866.1| DNA ligase [Neisseria gonorrhoeae PID1] gi|291011331|gb|EFE03327.1| DNA ligase [Neisseria gonorrhoeae DGI2] Length = 829 Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 28 YYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 69 >gi|268594283|ref|ZP_06128450.1| DNA ligase [Neisseria gonorrhoeae 35/02] gi|268547672|gb|EEZ43090.1| DNA ligase [Neisseria gonorrhoeae 35/02] Length = 827 Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 26 YYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 67 >gi|254493140|ref|ZP_05106311.1| DNA ligase [Neisseria gonorrhoeae 1291] gi|268598398|ref|ZP_06132565.1| DNA ligase [Neisseria gonorrhoeae MS11] gi|226512180|gb|EEH61525.1| DNA ligase [Neisseria gonorrhoeae 1291] gi|268582529|gb|EEZ47205.1| DNA ligase [Neisseria gonorrhoeae MS11] Length = 829 Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 28 YYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 69 >gi|158521726|ref|YP_001529596.1| DNA ligase, NAD-dependent [Desulfococcus oleovorans Hxd3] gi|254781314|sp|A9A0L9|DNLJ_DESOH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|158510552|gb|ABW67519.1| DNA ligase, NAD-dependent [Desulfococcus oleovorans Hxd3] Length = 682 Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 29/66 (43%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +L K EA V +L H YY D P +D YDR+ L L+ P+L D Sbjct: 4 TLDKSEAKERVTFLRNELHRHNHLYYIKDAPEISDAEYDRLFRELAELEALHPDLADPAS 63 Query: 113 PWNTVG 118 P VG Sbjct: 64 PTARVG 69 >gi|268681538|ref|ZP_06148400.1| DNA ligase [Neisseria gonorrhoeae PID332] gi|268621822|gb|EEZ54222.1| DNA ligase [Neisseria gonorrhoeae PID332] Length = 829 Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 28 YYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 69 >gi|295688860|ref|YP_003592553.1| DNA ligase, NAD-dependent [Caulobacter segnis ATCC 21756] gi|295430763|gb|ADG09935.1| DNA ligase, NAD-dependent [Caulobacter segnis ATCC 21756] Length = 783 Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 35/68 (51%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ +A+ E+E L H Y++ D+P +D YD + R ++ +FP L + Sbjct: 6 VADLTEAQAVEELERLADELTRHDLAYHQQDNPTISDADYDALKRRNLDIETRFPHLVRD 65 Query: 111 DHPWNTVG 118 + P VG Sbjct: 66 NSPSMRVG 73 >gi|229843861|ref|ZP_04464002.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae 6P18H1] gi|229812855|gb|EEP48543.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae 6P18H1] Length = 670 Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 29/57 (50%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 7 KINNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|225851368|ref|YP_002731602.1| DNA ligase, NAD-dependent [Persephonella marina EX-H1] gi|254781385|sp|C0QSF6|DNLJ_PERMH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|225645574|gb|ACO03760.1| DNA ligase, NAD-dependent [Persephonella marina EX-H1] Length = 714 Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 37/73 (50%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 L K KK +K +A +E L + +H YY L +P+ +D YD++ L ++ +F Sbjct: 17 LLKIKKEHIKTKEDAEAIIEDLRDVIRYHDWRYYVLANPVISDYEYDQLFHLLKDIESRF 76 Query: 105 PELFDEDHPWNTV 117 PEL D P V Sbjct: 77 PELITPDSPTQRV 89 >gi|121602535|ref|YP_989218.1| NAD-dependent DNA ligase LigA [Bartonella bacilliformis KC583] gi|166215397|sp|A1UTB5|DNLJ_BARBK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|120614712|gb|ABM45313.1| DNA ligase, NAD-dependent [Bartonella bacilliformis KC583] Length = 717 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 4/75 (5%) Query: 45 LDK-AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQ 103 +DK AK +T+L EA E+E+L K H Y D P +D YD + R ++ Sbjct: 1 MDKDAKNLTAL---EAERELEWLAKEIARHDVLYNNHDQPEISDARYDALRRRNIEIETL 57 Query: 104 FPELFDEDHPWNTVG 118 FPEL D P VG Sbjct: 58 FPELVRADSPSYKVG 72 >gi|298293088|ref|YP_003695027.1| DNA ligase, NAD-dependent [Starkeya novella DSM 506] gi|296929599|gb|ADH90408.1| DNA ligase, NAD-dependent [Starkeya novella DSM 506] Length = 725 Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 32/68 (47%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L+ EA E L H + YY+ D P +D YD + R +A++ QFPEL Sbjct: 10 VEKLTADEAAKEHARLGDEIAGHDRRYYQDDAPSVSDADYDALRRRYEAIEAQFPELKGI 69 Query: 111 DHPWNTVG 118 D VG Sbjct: 70 DSLSEKVG 77 >gi|148272584|ref|YP_001222145.1| NAD-dependent DNA ligase LigA [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|166215575|sp|A5CQU5|DNLJ_CLAM3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|147830514|emb|CAN01449.1| NAD-dependant DNA ligase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 853 Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H+ YY D +D YD + L+AL+E P L +D P TVG Sbjct: 40 HRDEYYGADASTLSDAEYDALVHELEALEEAHPTLRSQDSPTQTVG 85 >gi|319939188|ref|ZP_08013551.1| DNA ligase [Streptococcus anginosus 1_2_62CV] gi|319811584|gb|EFW07860.1| DNA ligase [Streptococcus anginosus 1_2_62CV] Length = 652 Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LVK+ + YY D+P +D YD++ L L++Q+PE D P + VG Sbjct: 8 LVKLLNQYAHEYYTTDNPSVSDSEYDKLYHELLDLEKQYPEFVQPDSPTHRVG 60 >gi|317489959|ref|ZP_07948451.1| DNA ligase [Eggerthella sp. 1_3_56FAA] gi|316910957|gb|EFV32574.1| DNA ligase [Eggerthella sp. 1_3_56FAA] Length = 708 Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 13/89 (14%) Query: 31 EAKFLPNKRAL-ESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGL 89 E + L +++AL E+ D A ++ +L + E+E HH YY D P +D Sbjct: 4 EQQTLLDEQALAEATSDPAARIDALRR-----EIE-------HHSYLYYANDAPEISDAA 51 Query: 90 YDRVSERLDALQEQFPELFDEDHPWNTVG 118 +D + L L+ PEL D P VG Sbjct: 52 FDSLMRELRELEAAHPELIDPSSPTQRVG 80 >gi|167039197|ref|YP_001662182.1| DNA ligase, NAD-dependent [Thermoanaerobacter sp. X514] gi|256752857|ref|ZP_05493696.1| DNA ligase, NAD-dependent [Thermoanaerobacter ethanolicus CCSD1] gi|300913208|ref|ZP_07130525.1| DNA ligase, NAD-dependent [Thermoanaerobacter sp. X561] gi|307723778|ref|YP_003903529.1| NAD-dependent DNA ligase [Thermoanaerobacter sp. X513] gi|254781440|sp|B0K3S1|DNLJ_THEPX RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166853437|gb|ABY91846.1| DNA ligase, NAD-dependent [Thermoanaerobacter sp. X514] gi|256748259|gb|EEU61324.1| DNA ligase, NAD-dependent [Thermoanaerobacter ethanolicus CCSD1] gi|300889893|gb|EFK85038.1| DNA ligase, NAD-dependent [Thermoanaerobacter sp. X561] gi|307580839|gb|ADN54238.1| DNA ligase, NAD-dependent [Thermoanaerobacter sp. X513] Length = 662 Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY LD P +D YD + L L+E++PEL D P VG Sbjct: 16 YHNYRYYVLDQPEISDYEYDMLMRELIELEEKYPELKTPDSPSQRVG 62 >gi|299067453|emb|CBJ38652.1| DNA ligase [Ralstonia solanacearum CMR15] Length = 813 Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 31 YYVLDQPSVPDAEYDRLYRELEALEADHPELRTPDSPTLRVG 72 >gi|289577826|ref|YP_003476453.1| DNA ligase, NAD-dependent [Thermoanaerobacter italicus Ab9] gi|289527539|gb|ADD01891.1| DNA ligase, NAD-dependent [Thermoanaerobacter italicus Ab9] Length = 662 Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY LD P +D YD + L L+E++PEL D P VG Sbjct: 16 YHNYRYYVLDQPEISDYEYDMLMRELIELEEKYPELKTPDSPSQRVG 62 >gi|160902460|ref|YP_001568041.1| DNA ligase, NAD-dependent [Petrotoga mobilis SJ95] gi|190359269|sp|A9BJX5|DNLJ_PETMO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|160360104|gb|ABX31718.1| DNA ligase, NAD-dependent [Petrotoga mobilis SJ95] Length = 668 Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 27/46 (58%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY L DP+ +D YD++ + L L++++PEL D P +G Sbjct: 21 HNYRYYVLADPIISDQEYDKLFKELVELEKKYPELKTPDSPTQRIG 66 >gi|167038089|ref|YP_001665667.1| DNA ligase, NAD-dependent [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116496|ref|YP_004186655.1| NAD-dependent DNA ligase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|254781439|sp|B0KBN6|DNLJ_THEP3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166856923|gb|ABY95331.1| DNA ligase, NAD-dependent [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929587|gb|ADV80272.1| DNA ligase, NAD-dependent [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 662 Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY LD P +D YD + L L+E++PEL D P VG Sbjct: 16 YHNYRYYVLDQPEISDYEYDMLMRELIELEEKYPELKTPDSPSQRVG 62 >gi|126729669|ref|ZP_01745482.1| DNA ligase, NAD-dependent [Sagittula stellata E-37] gi|126709788|gb|EBA08841.1| DNA ligase, NAD-dependent [Sagittula stellata E-37] Length = 714 Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 38/82 (46%) Query: 37 NKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSER 96 + RA E +V +++ +A E+ L I + Y+ D P TD YDR+ R Sbjct: 2 DDRASEELGMNDTEVGQMTEDQAREELRALSDILGQANRAYHAEDAPELTDAEYDRLKRR 61 Query: 97 LDALQEQFPELFDEDHPWNTVG 118 ++ +FP+L D P VG Sbjct: 62 NAEIEARFPQLKLADSPSEQVG 83 >gi|254488738|ref|ZP_05101943.1| DNA ligase, NAD-dependent [Roseobacter sp. GAI101] gi|214045607|gb|EEB86245.1| DNA ligase, NAD-dependent [Roseobacter sp. GAI101] Length = 706 Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 31/68 (45%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V LSK +A E+ L + + YY D P +D YD + R ++ +FP L Sbjct: 7 VQDLSKDQAAEELRRLSGLLAQANRQYYAEDAPQISDAEYDCLKRRNTEIETRFPSLKRA 66 Query: 111 DHPWNTVG 118 D P +G Sbjct: 67 DSPTEQIG 74 >gi|148240764|ref|YP_001226151.1| NAD-dependent DNA ligase LigA [Synechococcus sp. WH 7803] gi|166216252|sp|A5GPI9|DNLJ_SYNPW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|147849303|emb|CAK24854.1| NAD-dependent DNA ligase [Synechococcus sp. WH 7803] Length = 698 Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E E+ L+ A H YY LD P D +YDR+ L L+ PEL + D P V Sbjct: 9 ERAAELRQLLNRAAHA---YYVLDAPDLEDSVYDRLYRELLDLEAAHPELVEADSPTQRV 65 Query: 118 G 118 G Sbjct: 66 G 66 >gi|258510685|ref|YP_003184119.1| DNA ligase, NAD-dependent [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477411|gb|ACV57730.1| DNA ligase, NAD-dependent [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 684 Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++LS EA + L + +H + YY D+P +D +D + L L+ ++PEL D Sbjct: 8 SALSLEEARARAKVLREQIEYHNRKYYLEDNPEISDAEWDALMRDLIELERKYPELVDPA 67 Query: 112 HPWNTVG 118 P VG Sbjct: 68 SPTQRVG 74 >gi|145634259|ref|ZP_01789970.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae PittAA] gi|145268703|gb|EDK08696.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae PittAA] Length = 670 Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 7 QLDNLRKTLRQYEFEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|261854791|ref|YP_003262074.1| DNA ligase, NAD-dependent [Halothiobacillus neapolitanus c2] gi|261835260|gb|ACX95027.1| DNA ligase, NAD-dependent [Halothiobacillus neapolitanus c2] Length = 685 Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 22/46 (47%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LDDP +D +DR+ L ++ PE D P VG Sbjct: 31 HNFRYYVLDDPEISDAAFDRLMRELQQIESAHPEWITPDSPTQRVG 76 >gi|308271402|emb|CBX28010.1| DNA ligase [uncultured Desulfobacterium sp.] Length = 674 Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +VE L H YY +DDP +D YD++ + L L+ ++P L D P VG Sbjct: 12 KVENLKSELQKHNYHYYVMDDPQISDTQYDKMMQELIELEAKYPMLSTPDSPSMKVG 68 >gi|308184399|ref|YP_003928532.1| NAD-dependent DNA ligase LigA [Helicobacter pylori SJM180] gi|308060319|gb|ADO02215.1| NAD-dependent DNA ligase LigA [Helicobacter pylori SJM180] Length = 656 Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL ++ HH YY LD+ + +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYLNTLS-HH---YYNLDESIVSDAVYDELYQELKAYEEENPNRIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|262276434|ref|ZP_06054243.1| DNA ligase [Grimontia hollisae CIP 101886] gi|262220242|gb|EEY71558.1| DNA ligase [Grimontia hollisae CIP 101886] Length = 670 Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY D P D YDR+ + L A++ + PEL D P VG Sbjct: 18 YHGHLYYVEDKPELPDAEYDRMMQELLAIEAKHPELVTADSPSQRVG 64 >gi|218289368|ref|ZP_03493602.1| DNA ligase, NAD-dependent [Alicyclobacillus acidocaldarius LAA1] gi|218240474|gb|EED07655.1| DNA ligase, NAD-dependent [Alicyclobacillus acidocaldarius LAA1] Length = 684 Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++LS EA + L + +H + YY D+P +D +D + L L+ ++PEL D Sbjct: 8 SALSLEEARARAKVLREQIEYHNRKYYLEDNPEISDAEWDALMRDLIELERKYPELVDPA 67 Query: 112 HPWNTVG 118 P VG Sbjct: 68 SPTQRVG 74 >gi|323228068|gb|EGA12205.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] Length = 276 Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|322513636|ref|ZP_08066733.1| NAD-dependent DNA ligase LigA [Actinobacillus ureae ATCC 25976] gi|322120561|gb|EFX92462.1| NAD-dependent DNA ligase LigA [Actinobacillus ureae ATCC 25976] Length = 681 Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L + ++ Y+ LD+PL D YDR+ L L+ Q PE D P VG Sbjct: 17 QLEALRQKLREYEYHYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITADSPTQRVG 73 >gi|308182775|ref|YP_003926902.1| NAD-dependent DNA ligase LigA [Helicobacter pylori PeCan4] gi|308064960|gb|ADO06852.1| NAD-dependent DNA ligase LigA [Helicobacter pylori PeCan4] Length = 656 Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL ++ HH YY LD+ + +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYLNTLS-HH---YYNLDESIVSDAVYDELYQELKAYEEKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|33602779|ref|NP_890339.1| DNA ligase [Bordetella bronchiseptica RB50] gi|81429836|sp|Q7WCJ7|DNLJ_BORBR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|33577221|emb|CAE35778.1| DNA ligase [Bordetella bronchiseptica RB50] Length = 696 Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 22/47 (46%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY DDP D YD + L AL+ + PEL D P VG Sbjct: 21 QHNIRYYVHDDPSVPDAEYDALMRDLQALEAEHPELVTPDSPTQRVG 67 >gi|33597876|ref|NP_885519.1| DNA ligase [Bordetella parapertussis 12822] gi|81425567|sp|Q7W0T4|DNLJ_BORPA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|33574305|emb|CAE38638.1| DNA ligase [Bordetella parapertussis] Length = 696 Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 22/47 (46%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY DDP D YD + L AL+ + PEL D P VG Sbjct: 21 QHNIRYYVHDDPSVPDAEYDALMRDLQALEAEHPELVTPDSPTQRVG 67 >gi|33594429|ref|NP_882073.1| DNA ligase [Bordetella pertussis Tohama I] gi|81424006|sp|Q7VRX7|DNLJ_BORPE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|33564504|emb|CAE43819.1| DNA ligase [Bordetella pertussis Tohama I] Length = 696 Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 22/47 (46%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY DDP D YD + L AL+ + PEL D P VG Sbjct: 21 QHNIRYYVHDDPSVPDAEYDALMRDLQALEAEHPELVTPDSPTQRVG 67 >gi|225075650|ref|ZP_03718849.1| hypothetical protein NEIFLAOT_00666 [Neisseria flavescens NRL30031/H210] gi|224953072|gb|EEG34281.1| hypothetical protein NEIFLAOT_00666 [Neisseria flavescens NRL30031/H210] Length = 822 Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++YL + + YY LD P D YD++ L+AL+ PEL D P VG Sbjct: 8 IQYLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVG 63 >gi|300691610|ref|YP_003752605.1| DNA ligase [Ralstonia solanacearum PSI07] gi|299078670|emb|CBJ51328.1| DNA ligase [Ralstonia solanacearum PSI07] Length = 813 Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 31 YYVLDQPSVPDAEYDRLYRELEALEADHPELKTPDSPTLRVG 72 >gi|160940658|ref|ZP_02088001.1| hypothetical protein CLOBOL_05552 [Clostridium bolteae ATCC BAA-613] gi|158436393|gb|EDP14160.1| hypothetical protein CLOBOL_05552 [Clostridium bolteae ATCC BAA-613] Length = 699 Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 4/90 (4%) Query: 30 LEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGL 89 L F NK+ +E+ + K + LS + I + +LVK ++ YY ++ P +D + Sbjct: 10 LSNTFNDNKKIMEAHM-KQNQNEHLS--QEAIRIHHLVKQLNQYRHEYYNMNAPSVSDAV 66 Query: 90 YDRVSERLDALQEQFPELFDEDHPWNTVGY 119 YD + + LDAL+++ + + P TVGY Sbjct: 67 YDCLFDELDALEKR-TGIILSNSPTQTVGY 95 >gi|228476991|ref|ZP_04061629.1| DNA ligase, NAD-dependent [Streptococcus salivarius SK126] gi|228251010|gb|EEK10181.1| DNA ligase, NAD-dependent [Streptococcus salivarius SK126] Length = 652 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 64 EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E +VK+ + K YY D+P +D YD++ L AL+ ++PE D P + VG Sbjct: 7 ELVVKLN-QYAKEYYTEDNPSVSDAEYDKLYRELVALEAEYPEYVQADSPTHRVG 60 >gi|163789388|ref|ZP_02183827.1| DNA ligase, NAD-dependent [Carnobacterium sp. AT7] gi|159875242|gb|EDP69307.1| DNA ligase, NAD-dependent [Carnobacterium sp. AT7] Length = 673 Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D YD++ L AL+E+FP+L D P VG Sbjct: 27 YYVKDTPSIPDADYDKLYHELVALEEEFPDLISNDSPTQRVG 68 >gi|289704853|ref|ZP_06501270.1| DNA ligase (NAD(+)) [Micrococcus luteus SK58] gi|289558349|gb|EFD51623.1| DNA ligase (NAD(+)) [Micrococcus luteus SK58] Length = 797 Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 28/57 (49%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E E LV+ + YY+ D P +D YD + RL+ L+ PEL D P VG Sbjct: 24 EYEDLVERVRAARTAYYQRDAPEISDAEYDALYRRLEDLEALHPELVSNDSPTQEVG 80 >gi|269216606|ref|ZP_06160460.1| DNA ligase, NAD-dependent [Slackia exigua ATCC 700122] gi|269130135|gb|EEZ61217.1| DNA ligase, NAD-dependent [Slackia exigua ATCC 700122] Length = 709 Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 25/56 (44%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V L K HH YY D P +D +D + L L++ PEL D P VG Sbjct: 23 VRALRKEIEHHTYLYYAKDAPEISDAAFDSLMRELRELEQAHPELIDPTSPTQRVG 78 >gi|149275978|ref|ZP_01882123.1| DNA ligase [Pedobacter sp. BAL39] gi|149233406|gb|EDM38780.1| DNA ligase [Pedobacter sp. BAL39] Length = 671 Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK E +++ LVK H YY L P D +DR L+ L++Q+PE D + P Sbjct: 1 MSKNEVKDKMDALVKELNQHTYDYYVLAMPTIADYEFDRKLAALNKLEQQYPEYADPNSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQQVG 65 >gi|239917127|ref|YP_002956685.1| DNA ligase, NAD-dependent [Micrococcus luteus NCTC 2665] gi|239838334|gb|ACS30131.1| DNA ligase, NAD-dependent [Micrococcus luteus NCTC 2665] Length = 797 Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 28/57 (49%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E E LV+ + YY+ D P +D YD + RL+ L+ PEL D P VG Sbjct: 24 EYEDLVERVRAARTAYYQRDAPEISDAEYDALYRRLEDLEALHPELVSNDSPTQEVG 80 >gi|127513305|ref|YP_001094502.1| DNA ligase, NAD-dependent [Shewanella loihica PV-4] gi|166216242|sp|A3QFJ5|DNLJ_SHELP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|126638600|gb|ABO24243.1| DNA ligase, NAD-dependent [Shewanella loihica PV-4] Length = 669 Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 26/57 (45%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E++ L H YY D P D YDR+ RL L+ + PEL D P VG Sbjct: 7 EIKQLTDELNQHNYRYYVDDAPSIPDAEYDRLMRRLQELEAEHPELALADSPTQRVG 63 >gi|285018504|ref|YP_003376215.1| NAD-dependent_DNA_ligase [Xanthomonas albilineans GPE PC73] gi|283473722|emb|CBA16225.1| putative nad-dependent_dna_ligase protein [Xanthomonas albilineans] Length = 838 Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + + + ++E+ ++ A H YY L DP D YD + L+AL+ P L E Sbjct: 2 IAKFTPQQRVVELRSQLEDANHR---YYVLADPAIPDAEYDALMRELEALESAHPALARE 58 Query: 111 DHPWNTVG 118 D P +VG Sbjct: 59 DSPTRSVG 66 >gi|114797923|ref|YP_759116.1| DNA ligase, NAD-dependent [Hyphomonas neptunium ATCC 15444] gi|122942770|sp|Q0C577|DNLJ_HYPNA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|114738097|gb|ABI76222.1| DNA ligase, NAD-dependent [Hyphomonas neptunium ATCC 15444] Length = 701 Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY+ D P TD YD + +R A++ +FP L ED P + VG Sbjct: 33 YYQNDAPELTDADYDALRQRNLAIEARFPALKREDSPTDRVG 74 >gi|319426762|gb|ADV54836.1| DNA ligase, NAD-dependent [Shewanella putrefaciens 200] Length = 685 Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D P TD YDR+ + L L+ QFP+ D P VG Sbjct: 33 HNIRYYVDDAPSITDSEYDRLMQCLIKLEAQFPQFIVADSPTQRVG 78 >gi|50364975|ref|YP_053400.1| DNA ligase, polydeoxyribonucleotide synthase NAD+ [Mesoplasma florum L1] gi|81391966|sp|Q6F1V7|DNLJ_MESFL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|50363531|gb|AAT75516.1| DNA ligase, polydeoxyribonucleotide synthase NAD+ [Mesoplasma florum L1] Length = 666 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 19/44 (43%), Positives = 23/44 (52%) Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 K YY LD+P D YD+ +L L+ QFPEL D VG Sbjct: 22 KEYYVLDNPSVDDAEYDKTIHQLLDLENQFPELITSDSITQKVG 65 >gi|289804479|ref|ZP_06535108.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 119 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEILDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|304317508|ref|YP_003852653.1| DNA ligase, NAD-dependent [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779010|gb|ADL69569.1| DNA ligase, NAD-dependent [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 659 Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY LD P +D YD + L L+E+ PE D P VG Sbjct: 16 HHNYMYYVLDRPEISDYEYDMMMRELIKLEEEHPEFKTPDSPTQRVG 62 >gi|82523684|emb|CAI78466.1| NAD-dependent DNA ligase [uncultured candidate division WS3 bacterium] Length = 667 Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 26/55 (47%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 A V L ++ HH + YY P DG YD + L AL+ + PEL D P Sbjct: 7 ARARVAELRELIRHHDRKYYVDAAPEIADGEYDALMSELAALEREHPELVTADSP 61 >gi|257125939|ref|YP_003164053.1| DNA ligase, NAD-dependent [Leptotrichia buccalis C-1013-b] gi|257049878|gb|ACV39062.1| DNA ligase, NAD-dependent [Leptotrichia buccalis C-1013-b] Length = 706 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD--EDHPWNTVG 118 +H YY D+P+ +D YD + L L++++PEL + E+ P +G Sbjct: 39 YHNNLYYNEDNPIISDMEYDALMRELKQLEQEYPELLENSENSPTKKIG 87 >gi|307637302|gb|ADN79752.1| NAD-dependent DNA ligase [Helicobacter pylori 908] gi|325995893|gb|ADZ51298.1| DNA ligase [Helicobacter pylori 2018] gi|325997488|gb|ADZ49696.1| NAD-dependent DNA ligase [Helicobacter pylori 2017] Length = 656 Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL ++ HH YY LD+ + +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYLNTLS-HH---YYNLDESIVSDAVYDELYQELKAYEEENPNHIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|257791950|ref|YP_003182556.1| DNA ligase, NAD-dependent [Eggerthella lenta DSM 2243] gi|325829905|ref|ZP_08163363.1| DNA ligase (NAD+) [Eggerthella sp. HGA1] gi|257475847|gb|ACV56167.1| DNA ligase, NAD-dependent [Eggerthella lenta DSM 2243] gi|325488072|gb|EGC90509.1| DNA ligase (NAD+) [Eggerthella sp. HGA1] Length = 708 Score = 38.1 bits (87), Expect = 0.35, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 13/89 (14%) Query: 31 EAKFLPNKRAL-ESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGL 89 E + L +++AL E+ D A ++ +L + E+E HH YY D P +D Sbjct: 4 EQQTLLDEQALAEATNDPAARIDALRR-----EIE-------HHSYLYYANDAPEISDAA 51 Query: 90 YDRVSERLDALQEQFPELFDEDHPWNTVG 118 +D + L L+ PEL D P VG Sbjct: 52 FDSLMRELRELEAAHPELIDPSSPTQRVG 80 >gi|293188969|ref|ZP_06607703.1| DNA ligase, NAD-dependent [Actinomyces odontolyticus F0309] gi|292822104|gb|EFF81029.1| DNA ligase, NAD-dependent [Actinomyces odontolyticus F0309] Length = 777 Score = 38.1 bits (87), Expect = 0.35, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D YDR+ ++ ++E++P+L D P +VG Sbjct: 30 YYDRDSPTLADADYDRMYREVEQIEERYPQLRSADSPTMSVG 71 >gi|16329180|ref|NP_439908.1| NAD-dependent DNA ligase LigA [Synechocystis sp. PCC 6803] gi|7674015|sp|P72588|DNLJ_SYNY3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|1651660|dbj|BAA16588.1| DNA ligase [Synechocystis sp. PCC 6803] Length = 669 Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P+ D +YD++ L L+ + PEL D P VG Sbjct: 21 YYVLDAPVMEDSVYDQLYRELQRLEAENPELITPDSPTQRVG 62 >gi|327438552|dbj|BAK14917.1| NAD-dependent DNA ligase [Solibacillus silvestris StLB046] Length = 665 Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P+ D +YD++ L AL+E PE D P VG Sbjct: 22 YYVLDKPVVEDSVYDQLLHELIALEEANPEFIYPDSPTQRVG 63 >gi|77463176|ref|YP_352680.1| DNA ligase [Rhodobacter sphaeroides 2.4.1] gi|123730578|sp|Q3J355|DNLJ_RHOS4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|77387594|gb|ABA78779.1| DNA ligase [Rhodobacter sphaeroides 2.4.1] Length = 704 Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ D P +D YD + R A++EQFPEL D P + VG Sbjct: 33 YHTHDAPQISDADYDALKVRNRAIEEQFPELRRSDSPSDRVG 74 >gi|223932796|ref|ZP_03624793.1| DNA ligase, NAD-dependent [Streptococcus suis 89/1591] gi|223898505|gb|EEF64869.1| DNA ligase, NAD-dependent [Streptococcus suis 89/1591] Length = 652 Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + K YY+LD P +D YD + L L+ PEL D P + VG Sbjct: 5 ISELVSVLNQYAKEYYQLDQPSVSDAEYDTLYRELVELETAHPELILPDSPTHRVG 60 >gi|261380488|ref|ZP_05985061.1| DNA ligase, NAD-dependent [Neisseria subflava NJ9703] gi|284796739|gb|EFC52086.1| DNA ligase, NAD-dependent [Neisseria subflava NJ9703] Length = 822 Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++YL + + YY LD P D YD++ L+AL+ PEL D P VG Sbjct: 8 IKYLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVG 63 >gi|213027451|ref|ZP_03341898.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 79 Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEILDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|213850350|ref|ZP_03381248.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 110 Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 17 HHEYLYHVMDAPEILDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|297623824|ref|YP_003705258.1| DNA ligase, NAD-dependent [Truepera radiovictrix DSM 17093] gi|297165004|gb|ADI14715.1| DNA ligase, NAD-dependent [Truepera radiovictrix DSM 17093] Length = 681 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY L DP +D +DR+ L L+E PEL D P VG Sbjct: 25 YYVLQDPELSDAEWDRLFHELKRLEETHPELRTPDSPTQRVG 66 >gi|296110658|ref|YP_003621039.1| NAD-dependent DNA ligase [Leuconostoc kimchii IMSNU 11154] gi|295832189|gb|ADG40070.1| NAD-dependent DNA ligase [Leuconostoc kimchii IMSNU 11154] Length = 681 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 31/68 (45%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + L+ A E+ + L + YY D PL D +YD + RL L+ FP+ + Sbjct: 8 IEQLTTPMAQQEIANHQETLLQYGVAYYEQDAPLVEDYVYDALYARLVELEAAFPQFINP 67 Query: 111 DHPWNTVG 118 D P VG Sbjct: 68 DSPTQKVG 75 >gi|256380031|ref|YP_003103691.1| DNA ligase, NAD-dependent [Actinosynnema mirum DSM 43827] gi|255924334|gb|ACU39845.1| DNA ligase, NAD-dependent [Actinosynnema mirum DSM 43827] Length = 816 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY LD P +DG +D + L +L++ P L D P VG Sbjct: 60 HQFRYYVLDAPTISDGEFDALLRELQSLEDAHPGLATPDSPTQQVG 105 >gi|317132010|ref|YP_004091324.1| DNA ligase, NAD-dependent [Ethanoligenens harbinense YUAN-3] gi|315469989|gb|ADU26593.1| DNA ligase, NAD-dependent [Ethanoligenens harbinense YUAN-3] Length = 661 Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 27/61 (44%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A + L K H YY LD P D YDR+ L+ L+ PE+ D P V Sbjct: 2 DAAARAKELRKALSRHNYLYYVLDAPEIEDFEYDRMLRELEELEAAHPEIVTPDSPTQRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|52079149|ref|YP_077940.1| NAD-dependent DNA ligase LigA [Bacillus licheniformis ATCC 14580] gi|52784516|ref|YP_090345.1| NAD-dependent DNA ligase LigA [Bacillus licheniformis ATCC 14580] gi|319647076|ref|ZP_08001302.1| DNA ligase [Bacillus sp. BT1B_CT2] gi|81386291|sp|Q65MR2|DNLJ_BACLD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|52002360|gb|AAU22302.1| DNA ligase [Bacillus licheniformis ATCC 14580] gi|52347018|gb|AAU39652.1| LigA [Bacillus licheniformis ATCC 14580] gi|317390900|gb|EFV71701.1| DNA ligase [Bacillus sp. BT1B_CT2] Length = 667 Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LDDP D YD++ + L AL+E+ P+L D P VG Sbjct: 24 YHTLDDPSVPDSEYDKLMKELIALEEEHPDLKTPDSPSQRVG 65 >gi|331005395|ref|ZP_08328777.1| DNA ligase [gamma proteobacterium IMCC1989] gi|330420789|gb|EGG95073.1| DNA ligase [gamma proteobacterium IMCC1989] Length = 707 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 71 LHHQKW-YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +HH + YY LD+P D YDR+ L L+++ P D P VG Sbjct: 45 IHHYSYQYYALDNPTIPDAEYDRLFLELQTLEKENPSYVTSDSPTQRVG 93 >gi|260219439|emb|CBA26284.1| DNA ligase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 696 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD PL D YDR+ L L+ Q PE D P VG Sbjct: 36 YYVLDAPLVPDVEYDRLFRELQDLEAQHPEWVTPDSPTQRVG 77 >gi|37520296|ref|NP_923673.1| NAD-dependent DNA ligase LigA [Gloeobacter violaceus PCC 7421] gi|81710991|sp|Q7NMN8|DNLJ_GLOVI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|35211289|dbj|BAC88668.1| DNA ligase [Gloeobacter violaceus PCC 7421] Length = 668 Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Query: 70 ALHHQKW---YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 AL H +W YY LD P +D +YD+ L L+ ++PEL D P VG Sbjct: 18 ALLH-RWGYAYYVLDAPEVSDAIYDQHYRELVDLESRYPELVSPDSPTRRVG 68 >gi|301169841|emb|CBW29445.1| DNA ligase, NAD(+)-dependent [Haemophilus influenzae 10810] Length = 670 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 29/57 (50%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD P D YDR+ +L AL+ + PE D P VG Sbjct: 7 QLDNLRKTLRQYEYEYHVLDHPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|259416760|ref|ZP_05740680.1| DNA ligase, NAD-dependent [Silicibacter sp. TrichCH4B] gi|259348199|gb|EEW59976.1| DNA ligase, NAD-dependent [Silicibacter sp. TrichCH4B] Length = 739 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y++ D P +D YDR+ R AL E FPEL +E +VG Sbjct: 24 YHQKDAPTLSDAEYDRLKRRYLALAEAFPELAEEGTRVESVG 65 >gi|241759788|ref|ZP_04757888.1| DNA ligase, NAD-dependent [Neisseria flavescens SK114] gi|241319796|gb|EER56192.1| DNA ligase, NAD-dependent [Neisseria flavescens SK114] Length = 859 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++YL + + YY LD P D YD++ L+AL+ PEL D P VG Sbjct: 45 IKYLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVG 100 >gi|329121050|ref|ZP_08249681.1| NAD-dependent DNA ligase LigA [Dialister micraerophilus DSM 19965] gi|327471212|gb|EGF16666.1| NAD-dependent DNA ligase LigA [Dialister micraerophilus DSM 19965] Length = 666 Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 32/61 (52%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + +V+ L + +H YY LD P +D +D++ L + ++PEL +D P V Sbjct: 5 EIISKVKKLREELRYHSYLYYVLDKPEISDFEFDKMYRELVDFESKYPELITQDSPTQRV 64 Query: 118 G 118 G Sbjct: 65 G 65 >gi|110597868|ref|ZP_01386151.1| DNA ligase, NAD-dependent [Chlorobium ferrooxidans DSM 13031] gi|110340593|gb|EAT59076.1| DNA ligase, NAD-dependent [Chlorobium ferrooxidans DSM 13031] Length = 674 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 27/47 (57%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H + YY+ P +D +D + E+L AL++QFP+L D P VG Sbjct: 20 RHNRLYYQEAKPEISDYDFDLLLEQLVALEQQFPDLVTPDSPSQRVG 66 >gi|312882689|ref|ZP_07742426.1| NAD-dependent DNA ligase LigA [Vibrio caribbenthicus ATCC BAA-2122] gi|309369650|gb|EFP97165.1| NAD-dependent DNA ligase LigA [Vibrio caribbenthicus ATCC BAA-2122] Length = 670 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E ++ +L ++ H YY D+P D YDR+ L L+ Q PEL D P V Sbjct: 4 EIETKLNHLRQLLHSHGIKYYVEDNPQIPDSEYDRLMRELLELESQHPELVSLDSPTQRV 63 Query: 118 G 118 G Sbjct: 64 G 64 >gi|169825829|ref|YP_001695987.1| DNA ligase [Lysinibacillus sphaericus C3-41] gi|254781361|sp|B1HTW6|DNLJ_LYSSC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|168990317|gb|ACA37857.1| DNA ligase [Lysinibacillus sphaericus C3-41] Length = 667 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P+ D +YD++ L AL+E P L D P VG Sbjct: 22 YYVLDKPVVADSVYDQLLHELIALEEANPSLIFPDSPTQRVG 63 >gi|15613212|ref|NP_241515.1| NAD-dependent DNA ligase LigA [Bacillus halodurans C-125] gi|15213980|sp|Q9KF37|DNLJ_BACHD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|10173263|dbj|BAB04368.1| DNA ligase (polydeoxyribonucleotide synthase (NAD+)) [Bacillus halodurans C-125] Length = 669 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A ++E L + YY LD PL +D YD + L L+E FPEL + P Sbjct: 1 MERNDAERKIEKLRNQLEEYGYHYYVLDKPLVSDAEYDGLMNELIELEEAFPELKSDTSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|325135742|gb|EGC58354.1| DNA ligase, NAD-dependent [Neisseria meningitidis M0579] Length = 841 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 36/83 (43%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + + + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNLTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALERNHPELKLPDSPTQRVG 85 >gi|325129804|gb|EGC52612.1| DNA ligase, NAD-dependent [Neisseria meningitidis OX99.30304] Length = 841 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 36/83 (43%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + + + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNLTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALERNHPELKLPDSPTQRVG 85 >gi|312888786|ref|ZP_07748349.1| DNA ligase, NAD-dependent [Mucilaginibacter paludis DSM 18603] gi|311298661|gb|EFQ75767.1| DNA ligase, NAD-dependent [Mucilaginibacter paludis DSM 18603] Length = 675 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S EA ++ L H YY L P +D +D+ E L AL++QFPE + D P Sbjct: 1 MSPTEAKNKIHTLSAELKQHNYNYYVLAMPTISDFDFDKKLEELAALEKQFPEFAEPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQQVG 65 >gi|291544905|emb|CBL18014.1| DNA ligase, NAD-dependent [Ruminococcus sp. 18P13] Length = 660 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 28/61 (45%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A + + L K H YY LD P D YD + L A++ ++P+L P V Sbjct: 5 QAKLRLAQLTKEIEQHNYAYYVLDAPTIEDCDYDALMRELKAIETEYPQLLSPHSPSQRV 64 Query: 118 G 118 G Sbjct: 65 G 65 >gi|126649600|ref|ZP_01721841.1| NAD-dependent DNA ligase LigA [Bacillus sp. B14905] gi|126593925|gb|EAZ87848.1| NAD-dependent DNA ligase LigA [Bacillus sp. B14905] Length = 667 Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P+ D +YD++ L AL+E P L D P VG Sbjct: 22 YYVLDKPVVADSVYDQLLHELIALEEANPSLIFPDSPTQRVG 63 >gi|57241999|ref|ZP_00369939.1| DNA ligase, NAD-dependent [Campylobacter upsaliensis RM3195] gi|57017191|gb|EAL53972.1| DNA ligase, NAD-dependent [Campylobacter upsaliensis RM3195] Length = 644 Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 64 EYLVKIALHH--QKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL K+AL + + YY D+PL +D YDR+ + +++ P L D P + Sbjct: 3 EYLKKVALANLWMRAYYEEDEPLASDEEYDRLIREIKVFEKENPSLISPDSPTQKIA 59 >gi|237747723|ref|ZP_04578203.1| DNA ligase [Oxalobacter formigenes OXCC13] gi|229379085|gb|EEO29176.1| DNA ligase [Oxalobacter formigenes OXCC13] Length = 685 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P+ D YDR+ +L L++ PEL D P VG Sbjct: 33 YYVLDAPIVPDSEYDRLFRQLQELEKAHPELVVPDSPTQRVG 74 >gi|167647059|ref|YP_001684722.1| NAD-dependent DNA ligase [Caulobacter sp. K31] gi|190359242|sp|B0T1N5|DNLJ_CAUSK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|167349489|gb|ABZ72224.1| DNA ligase, NAD-dependent [Caulobacter sp. K31] Length = 792 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ +A E+E L H Y++ D P +D YD + R ++++FP L + Sbjct: 6 VADLTEAQAAEELERLADDLAAHDLRYHQQDAPTISDAEYDALKRRNLDIEDRFPHLVRD 65 Query: 111 DHPWNTVG 118 + P VG Sbjct: 66 NSPSMRVG 73 >gi|190575033|ref|YP_001972878.1| NAD-dependent DNA ligase LigA [Stenotrophomonas maltophilia K279a] gi|254781423|sp|B2FKJ1|DNLJ_STRMK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190012955|emb|CAQ46587.1| putative DNA ligase [Stenotrophomonas maltophilia K279a] Length = 821 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD P D YDR+ L+AL+ + PEL D P VG Sbjct: 23 YHELDAPEIPDVDYDRMVRELEALEREHPELARADSPTQQVG 64 >gi|295090337|emb|CBK76444.1| DNA ligase, NAD-dependent [Clostridium cf. saccharolyticum K10] Length = 676 Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 +++ LV+ H+ YY L+ P +D YDR+ ++L+ L+E+ ++ + P TVGY Sbjct: 17 KIKELVQTLNRHRHAYYNLNAPEISDAEYDRMYDQLERLEEETGIIY-SNSPTQTVGY 73 >gi|118465270|ref|YP_883031.1| NAD-dependent DNA ligase LigA [Mycobacterium avium 104] gi|166215821|sp|A0QJE3|DNLJ_MYCA1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|118166557|gb|ABK67454.1| DNA ligase, NAD-dependent [Mycobacterium avium 104] Length = 693 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + HQ YY D P+ +D +D + L AL+E+ PEL D P VG Sbjct: 20 LAETVREHQFRYYIKDAPIISDAEFDALFNELLALEERHPELRVADSPTQLVG 72 >gi|329120426|ref|ZP_08249092.1| NAD-dependent DNA ligase LigA [Neisseria bacilliformis ATCC BAA-1200] gi|327462110|gb|EGF08438.1| NAD-dependent DNA ligase LigA [Neisseria bacilliformis ATCC BAA-1200] Length = 887 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 85 YYTLDAPSVPDAEYDRLFRELEALEAAHPELKLPDSPTQRVG 126 >gi|325137931|gb|EGC60506.1| DNA ligase, NAD-dependent [Neisseria meningitidis ES14902] Length = 841 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALELNHPELKLPDSPTQRVG 85 >gi|308388851|gb|ADO31171.1| DNA ligase [Neisseria meningitidis alpha710] gi|325202538|gb|ADY97992.1| DNA ligase, NAD-dependent [Neisseria meningitidis M01-240149] gi|325207712|gb|ADZ03164.1| DNA ligase, NAD-dependent [Neisseria meningitidis NZ-05/33] Length = 841 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALELNHPELKLPDSPTQRVG 85 >gi|254776288|ref|ZP_05217804.1| NAD-dependent DNA ligase LigA [Mycobacterium avium subsp. avium ATCC 25291] Length = 681 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + HQ YY D P+ +D +D + L AL+E+ PEL D P VG Sbjct: 8 LAETVREHQFRYYIKDAPIISDAEFDALFNELLALEERHPELRVADSPTQLVG 60 >gi|94497003|ref|ZP_01303577.1| DNA ligase, NAD-dependent [Sphingomonas sp. SKA58] gi|94423679|gb|EAT08706.1| DNA ligase, NAD-dependent [Sphingomonas sp. SKA58] Length = 703 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L++ EA + L K H + Y+ D P +D YD + +AL+ FP L D P Sbjct: 7 LTEAEAANRLMRLAKEVAKHNRLYHDQDAPEISDADYDALIRENNALEAAFPHLIRADSP 66 Query: 114 WNTVG 118 VG Sbjct: 67 NAQVG 71 >gi|84393803|ref|ZP_00992550.1| DNA ligase [Vibrio splendidus 12B01] gi|84375600|gb|EAP92500.1| DNA ligase [Vibrio splendidus 12B01] Length = 670 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 31/63 (49%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 K + +E L + +H YY D P D YDR+ ++L ++E+ PEL D P Sbjct: 2 KESIQVTLEQLRETLHYHAVRYYVEDSPEIPDVEYDRLMQQLLKIEEENPELVTVDSPSQ 61 Query: 116 TVG 118 VG Sbjct: 62 RVG 64 >gi|254523079|ref|ZP_05135134.1| DNA ligase, NAD-dependent [Stenotrophomonas sp. SKA14] gi|219720670|gb|EED39195.1| DNA ligase, NAD-dependent [Stenotrophomonas sp. SKA14] Length = 821 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD P D YDR+ L+AL+ + PEL D P VG Sbjct: 23 YHELDAPEIPDVDYDRMVRELEALEREHPELARADSPTQQVG 64 >gi|217972882|ref|YP_002357633.1| DNA ligase, NAD-dependent [Shewanella baltica OS223] gi|254781416|sp|B8EEK5|DNLJ_SHEB2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|217498017|gb|ACK46210.1| DNA ligase, NAD-dependent [Shewanella baltica OS223] Length = 685 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D P TD YDR+ +RL L+ +P L D P VG Sbjct: 33 HNIRYYVDDAPSITDSEYDRLMQRLLKLEALYPHLIVADSPTQRVG 78 >gi|194366356|ref|YP_002028966.1| NAD-dependent DNA ligase LigA [Stenotrophomonas maltophilia R551-3] gi|254781422|sp|B4SP88|DNLJ_STRM5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|194349160|gb|ACF52283.1| DNA ligase, NAD-dependent [Stenotrophomonas maltophilia R551-3] Length = 821 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD P D YDR+ L+AL+ + PEL D P VG Sbjct: 23 YHELDAPEIPDVDYDRMVRELEALEREHPELARADSPTQQVG 64 >gi|304411949|ref|ZP_07393560.1| DNA ligase, NAD-dependent [Shewanella baltica OS183] gi|307303283|ref|ZP_07583038.1| DNA ligase, NAD-dependent [Shewanella baltica BA175] gi|304349809|gb|EFM14216.1| DNA ligase, NAD-dependent [Shewanella baltica OS183] gi|306913643|gb|EFN44065.1| DNA ligase, NAD-dependent [Shewanella baltica BA175] Length = 685 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D P TD YDR+ +RL L+ +P L D P VG Sbjct: 33 HNIRYYVDDAPSITDSEYDRLMQRLLKLEALYPHLIVADSPTQRVG 78 >gi|148982028|ref|ZP_01816589.1| NAD-dependent DNA ligase LigA [Vibrionales bacterium SWAT-3] gi|145960667|gb|EDK26012.1| NAD-dependent DNA ligase LigA [Vibrionales bacterium SWAT-3] Length = 670 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 31/63 (49%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 K + +E L + +H YY D P D YDR+ ++L ++E+ PEL D P Sbjct: 2 KESIQVTLEQLRETLHYHAVRYYVEDSPEIPDVEYDRLMQQLLKIEEENPELVTVDSPSQ 61 Query: 116 TVG 118 VG Sbjct: 62 RVG 64 >gi|160875869|ref|YP_001555185.1| DNA ligase, NAD-dependent [Shewanella baltica OS195] gi|190359285|sp|A9L5Z1|DNLJ_SHEB9 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|160861391|gb|ABX49925.1| DNA ligase, NAD-dependent [Shewanella baltica OS195] gi|315268060|gb|ADT94913.1| DNA ligase, NAD-dependent [Shewanella baltica OS678] Length = 685 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D P TD YDR+ +RL L+ +P L D P VG Sbjct: 33 HNIRYYVDDAPSITDSEYDRLMQRLLKLEALYPHLIVADSPTQRVG 78 >gi|46143448|ref|ZP_00135242.2| COG0272: NAD-dependent DNA ligase (contains BRCT domain type II) [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208768|ref|YP_001053993.1| NAD-dependent DNA ligase LigA [Actinobacillus pleuropneumoniae L20] gi|166215385|sp|A3N1V2|DNLJ_ACTP2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|126097560|gb|ABN74388.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 683 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L + ++ Y+ LD+PL D YDR+ L L+ Q PE D P VG Sbjct: 18 QLEALRQKLREYEYHYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITVDSPTQRVG 74 >gi|325203753|gb|ADY99206.1| DNA ligase, NAD-dependent [Neisseria meningitidis M01-240355] Length = 841 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALELNHPELKLPDSPTQRVG 85 >gi|153001196|ref|YP_001366877.1| DNA ligase, NAD-dependent [Shewanella baltica OS185] gi|166216241|sp|A6WPS5|DNLJ_SHEB8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|151365814|gb|ABS08814.1| DNA ligase, NAD-dependent [Shewanella baltica OS185] Length = 685 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D P TD YDR+ +RL L+ +P L D P VG Sbjct: 33 HNIRYYVDDAPSITDSEYDRLMQRLLKLEALYPHLIVADSPTQRVG 78 >gi|226325717|ref|ZP_03801235.1| hypothetical protein COPCOM_03530 [Coprococcus comes ATCC 27758] gi|225205841|gb|EEG88195.1| hypothetical protein COPCOM_03530 [Coprococcus comes ATCC 27758] Length = 687 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 3/70 (4%) Query: 52 TSLSKGEAMI--EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 T KG++M ++ LVK ++ YY D PL +D YDR+ + L L+EQ + Sbjct: 19 TPQKKGDSMSVKRIKNLVKQLNEYRHAYYNQDAPLVSDAEYDRLFDELKELEEQTGFIL- 77 Query: 110 EDHPWNTVGY 119 + P TVGY Sbjct: 78 SNSPTQTVGY 87 >gi|154507531|ref|ZP_02043173.1| hypothetical protein ACTODO_00010 [Actinomyces odontolyticus ATCC 17982] gi|153799320|gb|EDN81740.1| hypothetical protein ACTODO_00010 [Actinomyces odontolyticus ATCC 17982] Length = 777 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D YDR+ ++ ++E++P+L D P +VG Sbjct: 30 YYDRDSPTLADADYDRMYREVEEIEERYPQLRGADSPTMSVG 71 >gi|188527537|ref|YP_001910224.1| NAD-dependent DNA ligase LigA [Helicobacter pylori Shi470] gi|254781347|sp|B2UTL2|DNLJ_HELPS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|188143777|gb|ACD48194.1| NAD-dependent DNA ligase LigA [Helicobacter pylori Shi470] Length = 656 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL ++ HH YY LDD + +D +YD + + L A + + P + P Sbjct: 4 SQKEYLERIEYLNTLS-HH---YYNLDDSIVSDAVYDELYQELKAYEGKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|67920947|ref|ZP_00514466.1| NAD-dependent DNA ligase [Crocosphaera watsonii WH 8501] gi|67857064|gb|EAM52304.1| NAD-dependent DNA ligase [Crocosphaera watsonii WH 8501] Length = 670 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+P+ D +YD++ LD L+++ L D P VG Sbjct: 20 YYVLDNPIMEDAVYDQLYRELDTLEKENTHLITSDSPTQRVG 61 >gi|121634462|ref|YP_974707.1| DNA ligase [Neisseria meningitidis FAM18] gi|166216218|sp|A1KSS7|DNLJ_NEIMF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|120866168|emb|CAM09908.1| putative DNA ligase [Neisseria meningitidis FAM18] Length = 841 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALELNHPELKLPDSPTQRVG 85 >gi|117927902|ref|YP_872453.1| DNA ligase, NAD-dependent [Acidothermus cellulolyticus 11B] gi|166215382|sp|A0LSQ7|DNLJ_ACIC1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|117648365|gb|ABK52467.1| DNA ligase, NAD-dependent [Acidothermus cellulolyticus 11B] Length = 695 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 25/52 (48%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 LVK H YY LD P +D YD + L+ ++ +PEL D P V Sbjct: 23 LVKEIEEHAYRYYVLDAPTISDAEYDALMRELEEIENAYPELRTPDSPTQKV 74 >gi|292657108|ref|YP_003537005.1| DNA ligase, NAD-dependent [Haloferax volcanii DS2] gi|291370943|gb|ADE03170.1| DNA ligase, NAD-dependent [Haloferax volcanii DS2] Length = 699 Score = 37.7 bits (86), Expect = 0.46, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 SLS+ A + L + H YY DPL +D YD + RL AL++ F +L + Sbjct: 26 SLSREAAEGQAALLREAVREHDHRYYVAADPLVSDAAYDALFSRLVALEDAF-DLDTTNS 84 Query: 113 PWNTVG 118 P N VG Sbjct: 85 PTNRVG 90 >gi|88608555|ref|YP_506384.1| DNA ligase, NAD-dependent [Neorickettsia sennetsu str. Miyayama] gi|123736355|sp|Q2GDR2|DNLJ_NEOSM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|88600724|gb|ABD46192.1| DNA ligase, NAD-dependent [Neorickettsia sennetsu str. Miyayama] Length = 670 Score = 37.7 bits (86), Expect = 0.46, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 26/50 (52%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 EA E++ L + L H K YY+ D P TD YD + +R L E P L Sbjct: 2 EAKKEIQELYEKLLRHNKKYYQDDSPEITDAEYDSIKDRYLKLLEANPSL 51 >gi|24374425|ref|NP_718468.1| DNA ligase, NAD-dependent [Shewanella oneidensis MR-1] gi|81460839|sp|Q8ED70|DNLJ_SHEON RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|24348997|gb|AAN55912.1|AE015728_1 DNA ligase, NAD-dependent [Shewanella oneidensis MR-1] Length = 689 Score = 37.7 bits (86), Expect = 0.46, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D P TD YDR+ ++L L+ ++P+ D P VG Sbjct: 37 HNIRYYVDDAPSITDSEYDRLMQQLKKLEAEYPQFVLADSPTQRVG 82 >gi|325131881|gb|EGC54581.1| DNA ligase, NAD-dependent [Neisseria meningitidis M6190] Length = 841 Score = 37.7 bits (86), Expect = 0.46, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALELNHPELKLPDSPTQRVG 85 >gi|312197574|ref|YP_004017635.1| hypothetical protein FraEuI1c_3758 [Frankia sp. EuI1c] gi|311228910|gb|ADP81765.1| hypothetical protein FraEuI1c_3758 [Frankia sp. EuI1c] Length = 347 Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 13/103 (12%) Query: 4 FDRVFRSSKFENEHNITPAQWKKLLTLE---AKFLPNKRALESWLDKAKKVTS------- 53 FD E + PA W LL E A P+ ALE+WL A+++ + Sbjct: 113 FDLPPAGRTPEAAVELLPAAWADLLAREPELAAMFPDGEALEAWLASARELLAGYFALED 172 Query: 54 ---LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRV 93 L+ + VE+++ L + + RLD+ DGL RV Sbjct: 173 PRRLAPAARELYVEHVLGSGLRLRGYVDRLDEATTPDGLALRV 215 >gi|261392961|emb|CAX50546.1| DNA ligase (polydeoxyribonucleotide synthase [NAD+]) [Neisseria meningitidis 8013] Length = 841 Score = 37.7 bits (86), Expect = 0.46, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 36/83 (43%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YDR+ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDRLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PE D P VG Sbjct: 63 ELEALELNHPEFKLPDSPTQRVG 85 >gi|302878427|ref|YP_003846991.1| DNA ligase, NAD-dependent [Gallionella capsiferriformans ES-2] gi|302581216|gb|ADL55227.1| DNA ligase, NAD-dependent [Gallionella capsiferriformans ES-2] Length = 674 Score = 37.7 bits (86), Expect = 0.46, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 20/46 (43%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P D YD + L L+ Q PE D P VG Sbjct: 20 HNYQYYVLDAPTVPDAGYDTLFRELQRLEAQHPEFLTSDSPTQRVG 65 >gi|113868039|ref|YP_726528.1| NAD-dependent DNA ligase [Ralstonia eutropha H16] gi|123133949|sp|Q0KA11|DNLJ_RALEH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|113526815|emb|CAJ93160.1| NAD-dependent DNA ligase [Ralstonia eutropha H16] Length = 709 Score = 37.7 bits (86), Expect = 0.46, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 22/46 (47%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P D YD + L AL+ + PEL D P VG Sbjct: 38 HNYQYYVLDAPTIPDAEYDALFSELQALELEHPELQTPDSPTQRVG 83 >gi|330963250|gb|EGH63510.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. actinidiae str. M302091] Length = 787 Score = 37.7 bits (86), Expect = 0.47, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 17 QHNYRYHVLDEPSIPDAEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|330879146|gb|EGH13295.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 787 Score = 37.7 bits (86), Expect = 0.47, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 17 QHNYRYHVLDEPSIPDAEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|213968905|ref|ZP_03397045.1| DNA ligase, NAD-dependent [Pseudomonas syringae pv. tomato T1] gi|301385372|ref|ZP_07233790.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. tomato Max13] gi|302063632|ref|ZP_07255173.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. tomato K40] gi|302133897|ref|ZP_07259887.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926204|gb|EEB59759.1| DNA ligase, NAD-dependent [Pseudomonas syringae pv. tomato T1] Length = 787 Score = 37.7 bits (86), Expect = 0.47, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 17 QHNYRYHVLDEPSIPDAEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|28870811|ref|NP_793430.1| NAD-dependent DNA ligase [Pseudomonas syringae pv. tomato str. DC3000] gi|81730313|sp|Q87YY6|DNLJ_PSESM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|28854060|gb|AAO57125.1| DNA ligase, NAD-dependent [Pseudomonas syringae pv. tomato str. DC3000] Length = 787 Score = 37.7 bits (86), Expect = 0.47, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 17 QHNYRYHVLDEPSIPDAEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|11967289|gb|AAG42042.1| NAD-dependent DNA ligase [Aquifex pyrophilus] Length = 719 Score = 37.7 bits (86), Expect = 0.47, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 34/74 (45%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 L++ K + LS EA E L ++ H YY P+ +D YDR+ L ++ +F Sbjct: 18 LERIKSLKDLSLEEAKRLAEELKEVIRFHDYKYYVQASPVISDYDYDRLFRALKEIERKF 77 Query: 105 PELFDEDHPWNTVG 118 P+ D P V Sbjct: 78 PQFITPDSPTQRVA 91 >gi|331015921|gb|EGH95977.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 787 Score = 37.7 bits (86), Expect = 0.48, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 17 QHNYRYHVLDEPSIPDAEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|222481049|ref|YP_002567286.1| DNA ligase, NAD-dependent [Halorubrum lacusprofundi ATCC 49239] gi|254781342|sp|B9LU22|DNLJ_HALLT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|222453951|gb|ACM58216.1| DNA ligase, NAD-dependent [Halorubrum lacusprofundi ATCC 49239] Length = 710 Score = 37.7 bits (86), Expect = 0.48, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +LS+ EA + L H YY DPL D YDR+ RL L+ +F +L + Sbjct: 27 VGALSEDEATEQASLLRAAIREHDHRYYLEADPLIPDETYDRLFTRLQELENEF-DLPTQ 85 Query: 111 DHPWNTVG 118 + P VG Sbjct: 86 NSPTRRVG 93 >gi|330752433|emb|CBL87383.1| DNA ligase [uncultured Flavobacteria bacterium] Length = 663 Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P +D +D ++L L+ Q+PEL D + P VG Sbjct: 17 HNHNYYVLDTPTISDFEFDIKLKKLQVLESQYPELSDPNSPTMRVG 62 >gi|303252067|ref|ZP_07338236.1| truncated NAD-dependent DNA ligase LigA [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302649049|gb|EFL79236.1| truncated NAD-dependent DNA ligase LigA [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 451 Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 31/62 (50%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 G ++E L + ++ +Y+ LD+PL D YDR+ L L+ Q PE D P Sbjct: 12 GTTFAQLEALRQKLREYEYYYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITADSPTQR 71 Query: 117 VG 118 VG Sbjct: 72 VG 73 >gi|221639033|ref|YP_002525295.1| DNA ligase [Rhodobacter sphaeroides KD131] gi|254781405|sp|B9KRK2|DNLJ_RHOSK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|221159814|gb|ACM00794.1| DNA ligase [Rhodobacter sphaeroides KD131] Length = 704 Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ D P +D YD + R A++EQFPEL D P + VG Sbjct: 33 YHTHDAPQISDADYDALRLRNRAIEEQFPELRRSDSPSDRVG 74 >gi|92112835|ref|YP_572763.1| DNA ligase, NAD-dependent [Chromohalobacter salexigens DSM 3043] gi|122990589|sp|Q1QZP4|DNLJ_CHRSD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|91795925|gb|ABE58064.1| DNA ligase, NAD-dependent [Chromohalobacter salexigens DSM 3043] Length = 691 Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY DDP TD YD + L +L+ + PEL D P VG Sbjct: 26 YYVEDDPRITDAEYDALLRELQSLEAEHPELKTPDSPTQRVG 67 >gi|294497111|ref|YP_003560811.1| DNA ligase, NAD-dependent [Bacillus megaterium QM B1551] gi|294347048|gb|ADE67377.1| DNA ligase, NAD-dependent [Bacillus megaterium QM B1551] Length = 668 Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YD++ L ++E FPEL D P +G Sbjct: 24 YYVLDQPSVPDAEYDKLMNELIEIEESFPELKTADSPTQRIG 65 >gi|289626390|ref|ZP_06459344.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330866315|gb|EGH01024.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 787 Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P D YDR+ L AL+ + P L D P VG Sbjct: 18 HNYRYYVLDEPSIPDVEYDRLFHELKALEVENPHLVTPDSPTQRVG 63 >gi|254820448|ref|ZP_05225449.1| NAD-dependent DNA ligase LigA [Mycobacterium intracellulare ATCC 13950] Length = 693 Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + HQ YY D P+ +D +D + L AL+E+ PEL D P VG Sbjct: 20 LAEAVREHQFRYYIKDAPIISDAEFDSMFNELLALEERHPELRVADSPTQLVG 72 >gi|22298400|ref|NP_681647.1| NAD-dependent DNA ligase LigA [Thermosynechococcus elongatus BP-1] gi|81743454|sp|Q8DKK2|DNLJ_THEEB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|22294579|dbj|BAC08409.1| DNA ligase [Thermosynechococcus elongatus BP-1] Length = 689 Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P+ D +YD++ L L+ +PE D P +G Sbjct: 25 YYALDQPIMEDEVYDQLYRELQELEAAYPEYITPDSPTQRIG 66 >gi|116071920|ref|ZP_01469188.1| DNA ligase [Synechococcus sp. BL107] gi|116065543|gb|EAU71301.1| DNA ligase [Synechococcus sp. BL107] Length = 682 Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 3/63 (4%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + E E+ L+ A H YY LD P D +YDR+ L L++ P L D P Sbjct: 4 QSERASELRNLLNTAAHA---YYVLDTPTMEDAVYDRLYRELLELEQTTPSLKTADSPTQ 60 Query: 116 TVG 118 VG Sbjct: 61 RVG 63 >gi|172058707|ref|YP_001815167.1| ABC transporter related [Exiguobacterium sibiricum 255-15] gi|171991228|gb|ACB62150.1| ABC transporter related [Exiguobacterium sibiricum 255-15] Length = 288 Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 6/52 (11%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSER 96 LD+ ++VTSLSKG+A + +L+++A LD+P TDGL DR+++R Sbjct: 118 LDRGRRVTSLSKGQAQL---FLLQLAFATNAPVLLLDEP--TDGL-DRINKR 163 >gi|255021565|ref|ZP_05293608.1| DNA ligase [Acidithiobacillus caldus ATCC 51756] gi|254968953|gb|EET26472.1| DNA ligase [Acidithiobacillus caldus ATCC 51756] Length = 659 Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YYR D P+ +D YD + L AL++ PEL D P VG Sbjct: 10 YYRDDAPVMSDAEYDALLRELRALEDAHPELRVADSPTQRVG 51 >gi|30249713|ref|NP_841783.1| NAD-dependent DNA ligase [Nitrosomonas europaea ATCC 19718] gi|75540341|sp|Q82TW6|DNLJ_NITEU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|30180750|emb|CAD85664.1| NAD-dependent DNA ligase [Nitrosomonas europaea ATCC 19718] Length = 681 Score = 37.7 bits (86), Expect = 0.54, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 69 IALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 IALH YY D P+ D YD + L L++Q+P L D P VG Sbjct: 18 IALHDFH-YYVQDAPVIPDAEYDALFRTLQQLEQQYPHLVTPDSPTQRVG 66 >gi|317485271|ref|ZP_07944151.1| DNA ligase [Bilophila wadsworthia 3_1_6] gi|316923397|gb|EFV44603.1| DNA ligase [Bilophila wadsworthia 3_1_6] Length = 698 Score = 37.7 bits (86), Expect = 0.54, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L ++H Y+ LD P TD Y+ + L L+E+ PE D P N +G Sbjct: 19 LEELRAFVIYHNHRYHTLDAPEITDDEYNAAFQELLRLEERHPEWRSPDSPTNRIG 74 >gi|17229209|ref|NP_485757.1| NAD-dependent DNA ligase LigA [Nostoc sp. PCC 7120] gi|81772126|sp|Q8YW98|DNLJ_ANASP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|17135537|dbj|BAB78083.1| DNA ligase [Nostoc sp. PCC 7120] Length = 677 Score = 37.7 bits (86), Expect = 0.54, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 VE L ++ YY D P+ D +YD++ L L+ Q PEL D P +G Sbjct: 11 VEELRRLLQQASYAYYVSDAPIMEDAVYDQLYRELQQLEIQHPELVTPDSPTQRIG 66 >gi|302037359|ref|YP_003797681.1| DNA ligase (NAD(+)) [Candidatus Nitrospira defluvii] gi|300605423|emb|CBK41756.1| DNA ligase (NAD(+)) [Candidatus Nitrospira defluvii] Length = 675 Score = 37.7 bits (86), Expect = 0.55, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 22/47 (46%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY D P +D YDR+ L L+ P+L D P VG Sbjct: 24 HHDHLYYTKDRPEISDAEYDRLFRELVDLETAHPDLVTGDSPTQRVG 70 >gi|319946751|ref|ZP_08020985.1| NAD-dependent DNA ligase LigA [Streptococcus australis ATCC 700641] gi|319746799|gb|EFV99058.1| NAD-dependent DNA ligase LigA [Streptococcus australis ATCC 700641] Length = 652 Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 29/53 (54%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + H+ + YY D P +D YD++ L AL+E PEL + P + VG Sbjct: 8 LVTLLNHYAEEYYTKDAPSVSDYEYDKLYRELVALEEAHPELVQPNSPTHRVG 60 >gi|297717812|gb|ADI50049.1| DNA ligase [Candidatus Odyssella thessalonicensis L13] Length = 676 Score = 37.7 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L K +H + Y++ D P +D YD + R ++ FP+L ED P VG Sbjct: 1 LAKTIAYHDELYFQKDMPQISDAAYDALVVRNRQIENLFPDLRREDSPSKRVG 53 >gi|212634787|ref|YP_002311312.1| NAD-dependent DNA ligase [Shewanella piezotolerans WP3] gi|254781417|sp|B8CN91|DNLJ_SHEPW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|212556271|gb|ACJ28725.1| NAD-dependent DNA ligase [Shewanella piezotolerans WP3] Length = 668 Score = 37.7 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D+P D YDR+ +RL L+ Q PE D P VG Sbjct: 18 HNYHYYVDDNPTIPDVEYDRLLKRLIELETQSPEFAKADSPTQRVG 63 >gi|161598439|ref|YP_120478.2| NAD-dependent DNA ligase LigA [Nocardia farcinica IFM 10152] Length = 710 Score = 37.7 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 30/61 (49%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + + L + HQ YY D P+ +DG +D + L L+++ P+L D P V Sbjct: 25 EDRVRWQRLAEEVREHQFRYYVRDAPIISDGEFDALLRELQELEDRHPDLRTPDSPTQLV 84 Query: 118 G 118 G Sbjct: 85 G 85 >gi|313114130|ref|ZP_07799682.1| DNA ligase, NAD-dependent [Faecalibacterium cf. prausnitzii KLE1255] gi|310623539|gb|EFQ06942.1| DNA ligase, NAD-dependent [Faecalibacterium cf. prausnitzii KLE1255] Length = 666 Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 28/61 (45%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A VE L + + + YY D P D YD ++ L L+ QFP+L P V Sbjct: 8 QAKKRVEELRAVIEKNNRLYYDQDAPELEDFEYDALTRELKELEAQFPQLVTASSPTQKV 67 Query: 118 G 118 G Sbjct: 68 G 68 >gi|29829290|ref|NP_823924.1| NAD-dependent DNA ligase LigA [Streptomyces avermitilis MA-4680] gi|81719851|sp|Q82JK7|DNLJ_STRAW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|29606397|dbj|BAC70459.1| putative DNA ligase [Streptomyces avermitilis MA-4680] Length = 730 Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 26/46 (56%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H+ YY D P+ +D +D + L+AL+E++PEL D P V Sbjct: 30 HRFRYYVKDAPVVSDAEFDTLLRSLEALEEEYPELRTPDSPTQKVA 75 >gi|210134818|ref|YP_002301257.1| NAD-dependent DNA ligase LigA [Helicobacter pylori P12] gi|254781345|sp|B6JLJ9|DNLJ_HELP2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|210132786|gb|ACJ07777.1| DNA ligase [Helicobacter pylori P12] Length = 656 Score = 37.7 bits (86), Expect = 0.57, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL ++ HH YY LD+ + +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYLNTLS-HH---YYNLDESIVSDAVYDELYQELKAYEEKNPNDIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|318059490|ref|ZP_07978213.1| NAD-dependent DNA ligase LigA [Streptomyces sp. SA3_actG] gi|318076490|ref|ZP_07983822.1| NAD-dependent DNA ligase LigA [Streptomyces sp. SA3_actF] Length = 783 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H+ YY D P+ +D +D + RL AL+E+ P+L D P V Sbjct: 50 HRYRYYVNDQPVVSDAQFDELLRRLTALEEEHPQLRTPDSPTQKVA 95 >gi|107028796|ref|YP_625891.1| DNA ligase, NAD-dependent [Burkholderia cenocepacia AU 1054] gi|105897960|gb|ABF80918.1| DNA ligase, NAD-dependent [Burkholderia cenocepacia AU 1054] Length = 746 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L L+ PEL D P VG Sbjct: 86 YYVLDQPDLPDAEYDRLFRELQQLETDHPELVTPDSPTQRVG 127 >gi|302522063|ref|ZP_07274405.1| DNA ligase, NAD-dependent [Streptomyces sp. SPB78] gi|302430958|gb|EFL02774.1| DNA ligase, NAD-dependent [Streptomyces sp. SPB78] Length = 783 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H+ YY D P+ +D +D + RL AL+E+ P+L D P V Sbjct: 50 HRYRYYVNDQPVVSDAQFDELLRRLTALEEEHPQLRTPDSPTQKVA 95 >gi|88855225|ref|ZP_01129890.1| DNA ligase [marine actinobacterium PHSC20C1] gi|88815753|gb|EAR25610.1| DNA ligase [marine actinobacterium PHSC20C1] Length = 775 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 29/57 (50%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EV L L + YY D+ L D YD + +RL+ L+ + PEL +D P VG Sbjct: 32 EVGTLSTRILELRDAYYERDEVLVDDAEYDELIQRLERLEREHPELQSQDSPTLRVG 88 >gi|206560458|ref|YP_002231222.1| DNA ligase [Burkholderia cenocepacia J2315] gi|254781275|sp|B4ECN6|DNLJ_BURCJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|198036499|emb|CAR52396.1| DNA ligase [Burkholderia cenocepacia J2315] Length = 691 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L L+ PEL D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFRELQQLETDHPELVTPDSPTQRVG 72 >gi|187928361|ref|YP_001898848.1| DNA ligase [Ralstonia pickettii 12J] gi|254781397|sp|B2UB00|DNLJ_RALPJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|187725251|gb|ACD26416.1| DNA ligase, NAD-dependent [Ralstonia pickettii 12J] Length = 817 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ + PEL D P VG Sbjct: 35 YYVLDQPSVPDVEYDRLYRELEALETEHPELKTPDSPTLRVG 76 >gi|170733380|ref|YP_001765327.1| DNA ligase, NAD-dependent [Burkholderia cenocepacia MC0-3] gi|254781274|sp|B1JUF5|DNLJ_BURCC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|169816622|gb|ACA91205.1| DNA ligase, NAD-dependent [Burkholderia cenocepacia MC0-3] Length = 691 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L L+ PEL D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFRELQQLETDHPELVTPDSPTQRVG 72 >gi|116690045|ref|YP_835668.1| DNA ligase, NAD-dependent [Burkholderia cenocepacia HI2424] gi|166215562|sp|A0K8E8|DNLJ_BURCH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166215593|sp|Q1BHI7|DNLJ_BURCA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116648134|gb|ABK08775.1| DNA ligase, NAD-dependent [Burkholderia cenocepacia HI2424] Length = 691 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L L+ PEL D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFRELQQLETDHPELVTPDSPTQRVG 72 >gi|254247879|ref|ZP_04941200.1| NAD-dependent DNA ligase [Burkholderia cenocepacia PC184] gi|124872655|gb|EAY64371.1| NAD-dependent DNA ligase [Burkholderia cenocepacia PC184] Length = 691 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L L+ PEL D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFRELQQLETDHPELVTPDSPTQRVG 72 >gi|256826919|ref|YP_003150878.1| DNA ligase, NAD-dependent [Cryptobacterium curtum DSM 15641] gi|256583062|gb|ACU94196.1| DNA ligase, NAD-dependent [Cryptobacterium curtum DSM 15641] Length = 725 Score = 37.4 bits (85), Expect = 0.60, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 71 LHHQKW-YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + H W YY D P +D +D + L L+ + PE +D P VG Sbjct: 26 IEHNSWLYYAQDAPAISDAAFDSLMRELRQLEAEHPEFYDPTSPTQRVG 74 >gi|296046585|gb|ADG86434.1| NAD-dependent DNA ligase [Francisella novicida] Length = 670 Score = 37.4 bits (85), Expect = 0.61, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 26/57 (45%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E++ L H YY D P D YDR+ +RL L+ +P+ D P VG Sbjct: 7 EMDQLTHTINQHNIRYYVDDAPSIPDAEYDRLIKRLTELERDYPQFKSVDSPTQRVG 63 >gi|269219963|ref|ZP_06163817.1| DNA ligase, NAD-dependent [Actinomyces sp. oral taxon 848 str. F0332] gi|269210599|gb|EEZ76939.1| DNA ligase, NAD-dependent [Actinomyces sp. oral taxon 848 str. F0332] Length = 799 Score = 37.4 bits (85), Expect = 0.61, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 26/45 (57%) Query: 74 QKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Q+ Y+ D+P+ TD YDR+ L L+ + PEL + P +VG Sbjct: 29 QRAYHSGDEPIVTDEHYDRLVRELRRLEAEHPELAVDSSPAQSVG 73 >gi|227494609|ref|ZP_03924925.1| DNA ligase (NAD(+)) [Actinomyces coleocanis DSM 15436] gi|226832343|gb|EEH64726.1| DNA ligase (NAD(+)) [Actinomyces coleocanis DSM 15436] Length = 806 Score = 37.4 bits (85), Expect = 0.61, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P +D YD + E L L+ ++P L D P TVG Sbjct: 51 YYNLDAPTASDAEYDVLFEELKDLEAKWPMLVTPDSPTQTVG 92 >gi|328956034|ref|YP_004373367.1| DNA ligase, NAD-dependent [Coriobacterium glomerans PW2] gi|328456358|gb|AEB07552.1| DNA ligase, NAD-dependent [Coriobacterium glomerans PW2] Length = 752 Score = 37.4 bits (85), Expect = 0.61, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 38/84 (45%) Query: 35 LPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVS 94 +P + + +S A +TS + E L ++ +H YY LD P +D +DR+ Sbjct: 20 MPGEASKDSTAQPAGHMTSTAAVPPAERAEELRRLLDYHAYRYYALDAPEISDAQFDRLL 79 Query: 95 ERLDALQEQFPELFDEDHPWNTVG 118 L ++ + P+L D VG Sbjct: 80 RELQQIEVEHPDLITPDSYTQRVG 103 >gi|284166901|ref|YP_003405180.1| DNA ligase, NAD-dependent [Haloterrigena turkmenica DSM 5511] gi|284016556|gb|ADB62507.1| DNA ligase, NAD-dependent [Haloterrigena turkmenica DSM 5511] Length = 692 Score = 37.4 bits (85), Expect = 0.61, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V LS+ EA +VE L + H + YY DP+ D YD + RL L++ F L Sbjct: 23 VGELSEDEAREQVELLREAIREHDRRYYVESDPVIADRTYDALFARLRDLEDAF-GLEHP 81 Query: 111 DHPWNTVG 118 D P +VG Sbjct: 82 DSPTRSVG 89 >gi|302554316|ref|ZP_07306658.1| DNA ligase, NAD-dependent [Streptomyces viridochromogenes DSM 40736] gi|302471934|gb|EFL35027.1| DNA ligase, NAD-dependent [Streptomyces viridochromogenes DSM 40736] Length = 731 Score = 37.4 bits (85), Expect = 0.61, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 DK + T++ EA + L + H+ YY D P+ +D +D++ L+AL++++P Sbjct: 4 DKQAETTTVP-AEAREKHARLAEQIEEHRFRYYVKDAPVVSDAEFDQLLRSLEALEDEYP 62 Query: 106 ELFDEDHPWNTVG 118 EL D P V Sbjct: 63 ELRTPDSPTQKVA 75 >gi|42519595|ref|NP_965525.1| NAD-dependent DNA ligase [Lactobacillus johnsonii NCC 533] gi|81667534|sp|Q74I49|DNLJ_LACJO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|41583884|gb|AAS09491.1| NAD-dependent DNA ligase [Lactobacillus johnsonii NCC 533] Length = 668 Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%) Query: 75 KW---YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 KW YY D P+ D +YD+ + L L+EQFP+L D VG Sbjct: 22 KWADDYYAKDAPVVEDAVYDKTYQELVELEEQFPDLVTADSITQRVG 68 >gi|163731899|ref|ZP_02139346.1| DNA ligase, NAD-dependent [Roseobacter litoralis Och 149] gi|161395353|gb|EDQ19675.1| DNA ligase, NAD-dependent [Roseobacter litoralis Och 149] Length = 705 Score = 37.4 bits (85), Expect = 0.62, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 32/66 (48%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 SL++ A E+ L ++ Y+ D P +D YD R AL+++FP L D Sbjct: 8 SLNEKAAEEELSRLAELLEQANTAYHTKDAPFMSDAEYDAYKRRNLALEDRFPHLKRADS 67 Query: 113 PWNTVG 118 P + VG Sbjct: 68 PTDVVG 73 >gi|77919807|ref|YP_357622.1| DNA ligase, NAD-dependent [Pelobacter carbinolicus DSM 2380] gi|123756590|sp|Q3A2F5|DNLJ_PELCD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|77545890|gb|ABA89452.1| DNA ligase, NAD-dependent [Pelobacter carbinolicus DSM 2380] Length = 671 Score = 37.4 bits (85), Expect = 0.62, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 71 LH-HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LH H + YY D P TD YDR+ L L++ +PEL P VG Sbjct: 17 LHRHSRLYYTYDRPEITDAEYDRLFRELLELEKAYPELVTAASPSLRVG 65 >gi|303239321|ref|ZP_07325849.1| DNA ligase, NAD-dependent [Acetivibrio cellulolyticus CD2] gi|302593107|gb|EFL62827.1| DNA ligase, NAD-dependent [Acetivibrio cellulolyticus CD2] Length = 663 Score = 37.4 bits (85), Expect = 0.62, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 29/56 (51%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L K +H YY DD +D YD++S L L+++ PEL + P VG Sbjct: 7 IEELRKTIEYHNDRYYNQDDAEISDYEYDQLSLELRKLEQEHPELALTNSPTQKVG 62 >gi|81373659|sp|Q5YRS7|DNLJ2_NOCFA RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 2 gi|54017744|dbj|BAD59114.1| putative DNA ligase [Nocardia farcinica IFM 10152] Length = 683 Score = 37.4 bits (85), Expect = 0.62, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ +DG +D + L L+++ P+L D P VG Sbjct: 13 HQFRYYVRDAPIISDGEFDALLRELQELEDRHPDLRTPDSPTQLVG 58 >gi|330718928|ref|ZP_08313528.1| DNA ligase, NAD-dependent [Leuconostoc fallax KCTC 3537] Length = 681 Score = 37.4 bits (85), Expect = 0.63, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 33/74 (44%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 L + K V+ L+ +A E+ L + YY D+P D +YD RL L+ F Sbjct: 2 LPEFKAVSELTTAQAQQEIAKLQDDLTRYGVEYYEDDNPSVEDHVYDAFYARLVDLEAAF 61 Query: 105 PELFDEDHPWNTVG 118 P+ + P VG Sbjct: 62 PQFMTPESPTQRVG 75 >gi|78066803|ref|YP_369572.1| DNA ligase (NAD+) [Burkholderia sp. 383] gi|123742568|sp|Q39F38|DNLJ_BURS3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|77967548|gb|ABB08928.1| DNA ligase (NAD+) [Burkholderia sp. 383] Length = 691 Score = 37.4 bits (85), Expect = 0.63, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L L+ PEL D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFRELQQLETDHPELVTPDSPTQRVG 72 >gi|311104688|ref|YP_003977541.1| DNA ligase, NAD-dependent [Achromobacter xylosoxidans A8] gi|310759377|gb|ADP14826.1| DNA ligase, NAD-dependent [Achromobacter xylosoxidans A8] Length = 702 Score = 37.4 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D+P +D YD + L AL+ + PEL + P VG Sbjct: 23 QHNVRYYVYDEPSISDAEYDGLMRELQALEAEHPELVTPESPTQRVG 69 >gi|197117724|ref|YP_002138151.1| NAD-dependent DNA ligase [Geobacter bemidjiensis Bem] gi|254781337|sp|B5EIJ0|DNLJ_GEOBB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|197087084|gb|ACH38355.1| DNA ligase, NAD-dependent [Geobacter bemidjiensis Bem] Length = 668 Score = 37.4 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A +++L H + YY D P TD YD + L L+ +P+L D P Sbjct: 1 MDKTAAAQRIKWLSSEIERHNRLYYEQDMPEITDAEYDALFRELKELEASYPDLALPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TGRVG 65 >gi|315638276|ref|ZP_07893457.1| NAD-dependent DNA ligase LigA [Campylobacter upsaliensis JV21] gi|315481623|gb|EFU72246.1| NAD-dependent DNA ligase LigA [Campylobacter upsaliensis JV21] Length = 644 Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 64 EYLVKIALHH--QKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL K+ L + + YY D+PL +D YDR+ + A +++ P L D P + Sbjct: 3 EYLKKVELANLWMRAYYEEDEPLASDEEYDRLIREIKAFEKENPSLISPDSPTQKIA 59 >gi|261253653|ref|ZP_05946226.1| DNA ligase [Vibrio orientalis CIP 102891] gi|260937044|gb|EEX93033.1| DNA ligase [Vibrio orientalis CIP 102891] Length = 669 Score = 37.4 bits (85), Expect = 0.65, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY D+P D YDR+ L L+ Q PEL D P VG Sbjct: 18 YHGVKYYVEDNPEIPDAEYDRLMRDLMELESQHPELMSIDSPSQRVG 64 >gi|307729327|ref|YP_003906551.1| DNA ligase, NAD-dependent [Burkholderia sp. CCGE1003] gi|307583862|gb|ADN57260.1| DNA ligase, NAD-dependent [Burkholderia sp. CCGE1003] Length = 688 Score = 37.4 bits (85), Expect = 0.65, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ + L++++ + P+L D P VG Sbjct: 32 YYVLDQPDLPDAEYDRLFKELESIEAEHPDLIVPDSPTQRVG 73 >gi|126726435|ref|ZP_01742276.1| DNA ligase [Rhodobacterales bacterium HTCC2150] gi|126704298|gb|EBA03390.1| DNA ligase [Rhodobacterales bacterium HTCC2150] Length = 705 Score = 37.4 bits (85), Expect = 0.65, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 32/70 (45%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K ++ EA E++ L K+ Y+ D P +D YDR+ ++ FP+L Sbjct: 3 KNPLDMTMAEARSELKRLAKVIAAANSSYHTADAPEISDAEYDRLRRLNSEIEAAFPDLK 62 Query: 109 DEDHPWNTVG 118 D P + VG Sbjct: 63 RADSPSDNVG 72 >gi|226356158|ref|YP_002785898.1| DNA ligase (NAD(+)) [Deinococcus deserti VCD115] gi|254778151|sp|C1CVC7|DNLJ2_DEIDV RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 2 gi|226318148|gb|ACO46144.1| putative DNA ligase (NAD(+)) [Deinococcus deserti VCD115] Length = 686 Score = 37.4 bits (85), Expect = 0.67, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H + YY D P +D YD ++ L ++ + PE ++D P T+G Sbjct: 23 HNRAYYEQDAPEISDDEYDALARALRDMEARHPEWVEDDSPVQTIG 68 >gi|300021787|ref|YP_003754398.1| DNA ligase, NAD-dependent [Hyphomicrobium denitrificans ATCC 51888] gi|299523608|gb|ADJ22077.1| DNA ligase, NAD-dependent [Hyphomicrobium denitrificans ATCC 51888] Length = 712 Score = 37.4 bits (85), Expect = 0.68, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H + YYR D P +D YD + RL L++ PEL P VG Sbjct: 37 HDELYYRNDAPEISDADYDALRRRLTQLEDAHPELKRAGSPSEKVG 82 >gi|261401085|ref|ZP_05987210.1| DNA ligase, NAD-dependent [Neisseria lactamica ATCC 23970] gi|269208977|gb|EEZ75432.1| DNA ligase, NAD-dependent [Neisseria lactamica ATCC 23970] Length = 827 Score = 37.4 bits (85), Expect = 0.68, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 30 YYTLDAPSVPDAEYDRLFRELEALELNHPELKLPDSPTQRVG 71 >gi|152981161|ref|YP_001353755.1| DNA ligase (polydeoxyribonucleotide synthase) [Janthinobacterium sp. Marseille] gi|166215814|sp|A6SZQ8|DNLJ_JANMA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|151281238|gb|ABR89648.1| DNA ligase (Polydeoxyribonucleotide synthase) [Janthinobacterium sp. Marseille] Length = 692 Score = 37.4 bits (85), Expect = 0.68, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YD++ L AL+ PEL D P VG Sbjct: 40 HNYSYHVLDNPSIPDAEYDKLFRELQALETSHPELLVFDSPTQRVG 85 >gi|170079241|ref|YP_001735879.1| DNA ligase, NAD-dependent [Synechococcus sp. PCC 7002] gi|254781436|sp|B1XLV0|DNLJ_SYNP2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|169886910|gb|ACB00624.1| DNA ligase, NAD-dependent [Synechococcus sp. PCC 7002] Length = 678 Score = 37.4 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D +YD++ L AL+ P+L D P +G Sbjct: 23 YYVLDAPFMEDAVYDQLYRELVALETAHPQLITPDSPTQRIG 64 >gi|307720805|ref|YP_003891945.1| DNA ligase, NAD-dependent [Sulfurimonas autotrophica DSM 16294] gi|306978898|gb|ADN08933.1| DNA ligase, NAD-dependent [Sulfurimonas autotrophica DSM 16294] Length = 650 Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 26/42 (61%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LDDP+ TD +YD++ + ++ +E PE ++ P VG Sbjct: 20 YYVLDDPIMTDEVYDKLYKEVEQYEEAHPEDILKNSPTQRVG 61 >gi|237753058|ref|ZP_04583538.1| NAD-dependent DNA ligase LigA [Helicobacter winghamensis ATCC BAA-430] gi|229375325|gb|EEO25416.1| NAD-dependent DNA ligase LigA [Helicobacter winghamensis ATCC BAA-430] Length = 666 Score = 37.4 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 25/44 (56%) Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 K YY LDDP+ +D YD + ++ A + Q P+ +D P VG Sbjct: 18 KHYYVLDDPIASDEEYDLLYHKVLAYEAQNPQFIAQDSPTQRVG 61 >gi|59712497|ref|YP_205273.1| NAD-dependent DNA ligase LigA [Vibrio fischeri ES114] gi|75353581|sp|Q5E3L1|DNLJ_VIBF1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|59480598|gb|AAW86385.1| DNA ligase, NAD(+)-dependent [Vibrio fischeri ES114] Length = 668 Score = 37.4 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY D P D YDR+ ++L +++ + PEL D P VG Sbjct: 16 YHAYRYYVEDSPELPDAEYDRMMQQLLSIESEHPELVTVDSPSQRVG 62 >gi|323526494|ref|YP_004228647.1| NAD-dependent DNA ligase [Burkholderia sp. CCGE1001] gi|323383496|gb|ADX55587.1| DNA ligase, NAD-dependent [Burkholderia sp. CCGE1001] Length = 688 Score = 37.4 bits (85), Expect = 0.70, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YD++ + L++++ Q P+L D P VG Sbjct: 32 YYVLDQPDLPDAEYDKLFKELESIEAQHPDLIVPDSPTQRVG 73 >gi|255535523|ref|YP_003095894.1| DNA ligase [Flavobacteriaceae bacterium 3519-10] gi|255341719|gb|ACU07832.1| DNA ligase [Flavobacteriaceae bacterium 3519-10] Length = 667 Score = 37.4 bits (85), Expect = 0.70, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K H YY LD+P +D +D + L L+ QFPE +D + P VG Sbjct: 8 KIDALRKEIHQHNYSYYSLDEPTISDFEFDLKLKELQDLELQFPEFYDNNSPTLRVG 64 >gi|325915467|ref|ZP_08177781.1| DNA ligase, NAD-dependent [Xanthomonas vesicatoria ATCC 35937] gi|325538349|gb|EGD10031.1| DNA ligase, NAD-dependent [Xanthomonas vesicatoria ATCC 35937] Length = 833 Score = 37.4 bits (85), Expect = 0.71, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 24/43 (55%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 Y+ LD+P D YDR+ L+AL+ + P L D P VG+ Sbjct: 25 YHVLDEPQMADVDYDRLMRELEALEAEHPALATADSPTQRVGH 67 >gi|296158912|ref|ZP_06841740.1| DNA ligase, NAD-dependent [Burkholderia sp. Ch1-1] gi|295890787|gb|EFG70577.1| DNA ligase, NAD-dependent [Burkholderia sp. Ch1-1] Length = 688 Score = 37.4 bits (85), Expect = 0.71, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ + L++++ + P+L D P VG Sbjct: 32 YYVLDQPDLPDAEYDRLFKELESIETEHPDLIVPDSPTQRVG 73 >gi|195953269|ref|YP_002121559.1| DNA ligase, NAD-dependent [Hydrogenobaculum sp. Y04AAS1] gi|254781349|sp|B4U8X0|DNLJ_HYDS0 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|195932881|gb|ACG57581.1| DNA ligase, NAD-dependent [Hydrogenobaculum sp. Y04AAS1] Length = 700 Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 34/58 (58%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 LSK EA+ + L ++ +H YY L+ P+ +D YD + + L ++++ +P+L D Sbjct: 28 LSKEEAIKIINTLRELINYHDYRYYVLNQPVISDAEYDAIYKFLKSIEDNYPDLITPD 85 >gi|91784125|ref|YP_559331.1| NAD-dependent DNA ligase [Burkholderia xenovorans LB400] gi|123358676|sp|Q13XB0|DNLJ_BURXL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|91688079|gb|ABE31279.1| NAD-dependent DNA ligase [Burkholderia xenovorans LB400] Length = 688 Score = 37.4 bits (85), Expect = 0.73, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ + L++++ + P+L D P VG Sbjct: 32 YYVLDQPDLPDAEYDRLFKELESIETEHPDLIVPDSPTQRVG 73 >gi|300781381|ref|ZP_07091235.1| NAD-dependent DNA ligase LigA [Corynebacterium genitalium ATCC 33030] gi|300533088|gb|EFK54149.1| NAD-dependent DNA ligase LigA [Corynebacterium genitalium ATCC 33030] Length = 674 Score = 37.4 bits (85), Expect = 0.74, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L K H+ YY DP+ TD +D + RL L+E PEL D P VG Sbjct: 17 LAKEVRRHRDLYYN-GDPVITDAEFDEMFRRLQQLEEDHPELAVPDSPTKEVG 68 >gi|298369197|ref|ZP_06980515.1| DNA ligase, NAD-dependent [Neisseria sp. oral taxon 014 str. F0314] gi|298283200|gb|EFI24687.1| DNA ligase, NAD-dependent [Neisseria sp. oral taxon 014 str. F0314] Length = 830 Score = 37.4 bits (85), Expect = 0.75, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++L + + YY LD P D YD++ L+AL+ PEL D P VG Sbjct: 8 IKHLTALLNRYAYEYYTLDAPSVPDAEYDKLFRELEALERNHPELKLPDSPTQRVG 63 >gi|326390897|ref|ZP_08212448.1| DNA ligase, NAD-dependent [Thermoanaerobacter ethanolicus JW 200] gi|325993045|gb|EGD51486.1| DNA ligase, NAD-dependent [Thermoanaerobacter ethanolicus JW 200] Length = 662 Score = 37.4 bits (85), Expect = 0.75, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY LD P +D YD + L L+E++PE D P VG Sbjct: 16 YHNYRYYVLDQPEISDYEYDMLMRELIELEEKYPEFKTPDSPSQRVG 62 >gi|307266289|ref|ZP_07547829.1| DNA ligase, NAD-dependent [Thermoanaerobacter wiegelii Rt8.B1] gi|306918667|gb|EFN48901.1| DNA ligase, NAD-dependent [Thermoanaerobacter wiegelii Rt8.B1] Length = 662 Score = 37.4 bits (85), Expect = 0.75, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY LD P +D YD + L L+E++PE D P VG Sbjct: 16 YHNYRYYVLDQPEISDYEYDMLMRELIELEEKYPEFKTPDSPSQRVG 62 >gi|300704237|ref|YP_003745840.1| DNA ligase [Ralstonia solanacearum CFBP2957] gi|299071901|emb|CBJ43230.1| DNA ligase [Ralstonia solanacearum CFBP2957] Length = 813 Score = 37.4 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L+AL+ + P L D P VG Sbjct: 31 YYVLDQPSVPDAEYDRLYRELEALEAEHPALRTPDSPTLRVG 72 >gi|238917130|ref|YP_002930647.1| DNA ligase (NAD+) [Eubacterium eligens ATCC 27750] gi|238872490|gb|ACR72200.1| DNA ligase (NAD+) [Eubacterium eligens ATCC 27750] Length = 669 Score = 37.4 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L K +H YY D+P +D YD++ RL ++++ PE D P +G Sbjct: 6 EYSELKKTIDYHMDRYYNQDEPEISDYEYDKLMIRLKEIEKEHPEWVTSDSPSQKIG 62 >gi|239944478|ref|ZP_04696415.1| NAD-dependent DNA ligase LigA [Streptomyces roseosporus NRRL 15998] gi|239990936|ref|ZP_04711600.1| NAD-dependent DNA ligase LigA [Streptomyces roseosporus NRRL 11379] gi|291447943|ref|ZP_06587333.1| NAD-dependent DNA ligase LigA [Streptomyces roseosporus NRRL 15998] gi|291350890|gb|EFE77794.1| NAD-dependent DNA ligase LigA [Streptomyces roseosporus NRRL 15998] Length = 743 Score = 37.4 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 26/46 (56%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H+ YY D P+ +D +DR+ L+AL++++P L D P V Sbjct: 31 HRFRYYVKDQPVVSDAEFDRLLRSLEALEDEYPPLRTPDSPTQQVA 76 >gi|198274661|ref|ZP_03207193.1| hypothetical protein BACPLE_00817 [Bacteroides plebeius DSM 17135] gi|198272108|gb|EDY96377.1| hypothetical protein BACPLE_00817 [Bacteroides plebeius DSM 17135] Length = 666 Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%) Query: 60 MIEVEYL--VKIALH-HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 M E+E + ++ LH H YY L+ P +D +DR+ L L+ + PE +DE+ P Sbjct: 1 MTEIERIDQLREELHTHNHNYYILNAPTISDQEFDRLMRELQDLEAKHPEHYDENSPSVR 60 Query: 117 VG 118 VG Sbjct: 61 VG 62 >gi|157826142|ref|YP_001493862.1| NAD-dependent DNA ligase LigA [Rickettsia akari str. Hartford] gi|166216231|sp|A8GPM9|DNLJ_RICAH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157800100|gb|ABV75354.1| DNA ligase [Rickettsia akari str. Hartford] Length = 689 Score = 37.4 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Query: 49 KKVTSLSKGEAMIEVEYL-VKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + + +S+ EA +E L KIA ++ YY D+PL +D YD++ L++QFP L Sbjct: 2 QNIDFISEAEAKKLLEELSCKIAAYNHA-YYIEDNPLVSDAEYDQLVNINLKLEQQFPHL 60 Query: 108 FDEDHPWNTVG 118 E+ P VG Sbjct: 61 VLENSPSKEVG 71 >gi|300856841|ref|YP_003781825.1| DNA ligase [Clostridium ljungdahlii DSM 13528] gi|300436956|gb|ADK16723.1| DNA ligase [Clostridium ljungdahlii DSM 13528] Length = 664 Score = 37.0 bits (84), Expect = 0.79, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L KI +H YY D+P +D YD + + L ++ + PE+ D P VG Sbjct: 10 LKKIINYHNDRYYNQDNPEVSDYEYDMLMQELKNIEREHPEVITPDSPTQHVG 62 >gi|300783591|ref|YP_003763882.1| DNA ligase (NAD+) [Amycolatopsis mediterranei U32] gi|299793105|gb|ADJ43480.1| DNA ligase (NAD+) [Amycolatopsis mediterranei U32] Length = 726 Score = 37.0 bits (84), Expect = 0.79, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY LD P+ +DG +D + L L++ P L + P VG Sbjct: 44 HQFRYYVLDSPIISDGQFDELLGELQRLEDAHPALVTPESPTQRVG 89 >gi|295397184|ref|ZP_06807287.1| NAD-dependent DNA ligase LigA [Aerococcus viridans ATCC 11563] gi|294974573|gb|EFG50297.1| NAD-dependent DNA ligase LigA [Aerococcus viridans ATCC 11563] Length = 670 Score = 37.0 bits (84), Expect = 0.79, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L ++ + YY LD+P +D YD++ L L+ ++P + P VG Sbjct: 14 IEALTRLLNDYAYQYYALDNPTISDTEYDKLYRELQDLEAKYPTFIQAESPTQRVG 69 >gi|229496499|ref|ZP_04390213.1| DNA ligase, NAD-dependent [Porphyromonas endodontalis ATCC 35406] gi|229316396|gb|EEN82315.1| DNA ligase, NAD-dependent [Porphyromonas endodontalis ATCC 35406] Length = 671 Score = 37.0 bits (84), Expect = 0.79, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY L PL +D +DR+ ++L L+ Q PEL P VG Sbjct: 17 QHNYRYYVLSTPLISDVEFDRLMQQLIDLEAQHPELITPTSPTQRVG 63 >gi|289428790|ref|ZP_06430473.1| DNA ligase (NAD(+)) [Propionibacterium acnes J165] gi|289158188|gb|EFD06408.1| DNA ligase (NAD(+)) [Propionibacterium acnes J165] Length = 753 Score = 37.0 bits (84), Expect = 0.79, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query: 45 LDKAKKVTSLSKGEAMIEVEY----LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +D + + L EA E + L + L Q YY D P +D YDR+ L + Sbjct: 15 VDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELKKV 74 Query: 101 QEQFPELFDEDHPWNTVG 118 ++ PEL D P VG Sbjct: 75 EDDHPELRTPDSPTQRVG 92 >gi|313891779|ref|ZP_07825384.1| DNA ligase (NAD+) [Dialister microaerophilus UPII 345-E] gi|313119773|gb|EFR42960.1| DNA ligase (NAD+) [Dialister microaerophilus UPII 345-E] Length = 666 Score = 37.0 bits (84), Expect = 0.80, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + +V+ L + +H YY LD P +D +D++ L + ++PEL D P V Sbjct: 5 EIISKVKKLREELRYHSYLYYVLDKPEISDFEFDKMYRELVDFESKYPELITPDSPTQRV 64 Query: 118 G 118 G Sbjct: 65 G 65 >gi|289426325|ref|ZP_06428068.1| DNA ligase (NAD(+)) [Propionibacterium acnes SK187] gi|295131143|ref|YP_003581806.1| DNA ligase (NAD(+)) [Propionibacterium acnes SK137] gi|289153053|gb|EFD01771.1| DNA ligase (NAD(+)) [Propionibacterium acnes SK187] gi|291375741|gb|ADD99595.1| DNA ligase (NAD(+)) [Propionibacterium acnes SK137] Length = 753 Score = 37.0 bits (84), Expect = 0.80, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query: 45 LDKAKKVTSLSKGEAMIEVEY----LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +D + + L EA E + L + L Q YY D P +D YDR+ L + Sbjct: 15 VDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELKKV 74 Query: 101 QEQFPELFDEDHPWNTVG 118 ++ PEL D P VG Sbjct: 75 EDDHPELRTPDSPTQRVG 92 >gi|81611354|sp|Q6A7A2|DNLJ_PROAC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|50840696|gb|AAT83363.1| DNA ligase [Propionibacterium acnes KPA171202] Length = 772 Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query: 45 LDKAKKVTSLSKGEAMIEVEY----LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +D + + L EA E + L + L Q YY D P +D YDR+ L + Sbjct: 34 VDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELKKV 93 Query: 101 QEQFPELFDEDHPWNTVG 118 ++ PEL D P VG Sbjct: 94 EDDHPELRTPDSPTQRVG 111 >gi|314919398|gb|EFS83229.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL050PA1] Length = 740 Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query: 45 LDKAKKVTSLSKGEAMIEVEY----LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +D + + L EA E + L + L Q YY D P +D YDR+ L + Sbjct: 2 VDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELKKV 61 Query: 101 QEQFPELFDEDHPWNTVG 118 ++ PEL D P VG Sbjct: 62 EDDHPELRTPDSPTQRVG 79 >gi|313834239|gb|EFS71953.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL056PA1] gi|314924752|gb|EFS88583.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL036PA3] Length = 740 Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query: 45 LDKAKKVTSLSKGEAMIEVEY----LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +D + + L EA E + L + L Q YY D P +D YDR+ L + Sbjct: 2 VDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELKKV 61 Query: 101 QEQFPELFDEDHPWNTVG 118 ++ PEL D P VG Sbjct: 62 EDDHPELRTPDSPTQRVG 79 >gi|309805852|ref|ZP_07699887.1| NAD-dependent DNA ligase adenylation domain protein [Lactobacillus iners LactinV 03V1-b] gi|308167761|gb|EFO69905.1| NAD-dependent DNA ligase adenylation domain protein [Lactobacillus iners LactinV 03V1-b] Length = 109 Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 6/71 (8%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKW---YYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 ++ LS +A +EV +K+ W YY D P+ D +YD+V ++L L++++P L Sbjct: 1 MSELSLAQAKLEV---LKLRKQLDSWAYAYYVQDAPVVEDNIYDQVYQQLLELEQKYPVL 57 Query: 108 FDEDHPWNTVG 118 D D VG Sbjct: 58 IDPDSITQRVG 68 >gi|161621794|ref|YP_056321.2| NAD-dependent DNA ligase LigA [Propionibacterium acnes KPA171202] gi|315106904|gb|EFT78880.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL030PA1] Length = 740 Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query: 45 LDKAKKVTSLSKGEAMIEVEY----LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +D + + L EA E + L + L Q YY D P +D YDR+ L + Sbjct: 2 VDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELKKV 61 Query: 101 QEQFPELFDEDHPWNTVG 118 ++ PEL D P VG Sbjct: 62 EDDHPELRTPDSPTQRVG 79 >gi|126174866|ref|YP_001051015.1| DNA ligase (NAD(+)) [Shewanella baltica OS155] gi|125998071|gb|ABN62146.1| DNA ligase (NAD(+)) [Shewanella baltica OS155] Length = 145 Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D P TD YDR+ +RL L+ +P L D P VG Sbjct: 33 HNIRYYVDDAPSITDSEYDRLMQRLLKLEALYPHLIVADSPTQRVG 78 >gi|313822055|gb|EFS59769.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL036PA1] gi|313823710|gb|EFS61424.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL036PA2] Length = 740 Score = 37.0 bits (84), Expect = 0.82, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query: 45 LDKAKKVTSLSKGEAMIEVEY----LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +D + + L EA E + L + L Q YY D P +D YDR+ L + Sbjct: 2 VDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELKKV 61 Query: 101 QEQFPELFDEDHPWNTVG 118 ++ PEL D P VG Sbjct: 62 EDDHPELRTPDSPTQRVG 79 >gi|313793877|gb|EFS41901.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL110PA1] Length = 740 Score = 37.0 bits (84), Expect = 0.82, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query: 45 LDKAKKVTSLSKGEAMIEVEY----LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +D + + L EA E + L + L Q YY D P +D YDR+ L + Sbjct: 2 VDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELKKV 61 Query: 101 QEQFPELFDEDHPWNTVG 118 ++ PEL D P VG Sbjct: 62 EDDHPELRTPDSPTQRVG 79 >gi|313763487|gb|EFS34851.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL013PA1] gi|313773641|gb|EFS39607.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL074PA1] gi|313801268|gb|EFS42519.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL110PA2] gi|313808052|gb|EFS46533.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL087PA2] gi|313811476|gb|EFS49190.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL083PA1] gi|313813500|gb|EFS51214.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL025PA1] gi|313816668|gb|EFS54382.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL059PA1] gi|313819621|gb|EFS57335.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL046PA2] gi|313826033|gb|EFS63747.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL063PA1] gi|313829503|gb|EFS67217.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL063PA2] gi|313831217|gb|EFS68931.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL007PA1] gi|313840009|gb|EFS77723.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL086PA1] gi|314914784|gb|EFS78615.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL005PA4] gi|314920694|gb|EFS84525.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL050PA3] gi|314930573|gb|EFS94404.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL067PA1] gi|314954471|gb|EFS98877.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL027PA1] gi|314961961|gb|EFT06062.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL002PA2] gi|314963768|gb|EFT07868.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL082PA1] gi|314968405|gb|EFT12503.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL037PA1] gi|314974093|gb|EFT18189.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL053PA1] gi|314976617|gb|EFT20712.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL045PA1] gi|314978931|gb|EFT23025.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL072PA2] gi|314984280|gb|EFT28372.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL005PA1] gi|314986627|gb|EFT30719.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL005PA2] gi|314990983|gb|EFT35074.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL005PA3] gi|315079616|gb|EFT51609.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL053PA2] gi|315081153|gb|EFT53129.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL078PA1] gi|315087038|gb|EFT59014.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL002PA3] gi|315089213|gb|EFT61189.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL072PA1] gi|315095437|gb|EFT67413.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL038PA1] gi|315099114|gb|EFT71090.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL059PA2] gi|315100402|gb|EFT72378.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL046PA1] gi|315109094|gb|EFT81070.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL030PA2] gi|327328505|gb|EGE70267.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL096PA2] gi|327329632|gb|EGE71388.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL096PA3] gi|327334143|gb|EGE75857.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL097PA1] gi|327444292|gb|EGE90946.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL043PA2] gi|327444828|gb|EGE91482.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL043PA1] gi|327446317|gb|EGE92971.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL013PA2] gi|327452096|gb|EGE98750.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL092PA1] gi|327454866|gb|EGF01521.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL087PA3] gi|327457850|gb|EGF04505.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL083PA2] gi|328752459|gb|EGF66075.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL020PA1] gi|328755302|gb|EGF68918.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL087PA1] gi|328758217|gb|EGF71833.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL025PA2] gi|328759940|gb|EGF73524.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL099PA1] Length = 740 Score = 37.0 bits (84), Expect = 0.82, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query: 45 LDKAKKVTSLSKGEAMIEVEY----LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +D + + L EA E + L + L Q YY D P +D YDR+ L + Sbjct: 2 VDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELKKV 61 Query: 101 QEQFPELFDEDHPWNTVG 118 ++ PEL D P VG Sbjct: 62 EDDHPELRTPDSPTQRVG 79 >gi|251788438|ref|YP_003003159.1| NAD-dependent DNA ligase LigA [Dickeya zeae Ech1591] gi|247537059|gb|ACT05680.1| DNA ligase, NAD-dependent [Dickeya zeae Ech1591] Length = 682 Score = 37.0 bits (84), Expect = 0.82, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 11/81 (13%) Query: 38 KRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 KRA + +D A++ + E+ L++ HH Y+ DDP D YD + L Sbjct: 4 KRANQQNVDTARR--------RIKELRILIR---HHDIKYHSEDDPEILDSEYDLLKREL 52 Query: 98 DALQEQFPELFDEDHPWNTVG 118 L+ Q P L D P VG Sbjct: 53 SELEIQHPFLVTSDSPTQRVG 73 >gi|296171259|ref|ZP_06852663.1| DNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894227|gb|EFG73984.1| DNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 693 Score = 37.0 bits (84), Expect = 0.83, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 26/46 (56%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P+ +D +D + L AL++++PEL D P VG Sbjct: 27 HQFRYYIKDAPIVSDAEFDTMFNDLLALEDRYPELRVPDSPTQLVG 72 >gi|256852262|ref|ZP_05557648.1| DNA ligase, NAD-dependent [Lactobacillus jensenii 27-2-CHN] gi|260661706|ref|ZP_05862617.1| DNA ligase, NAD-dependent [Lactobacillus jensenii 115-3-CHN] gi|282934844|ref|ZP_06340077.1| DNA ligase (NAD(+)) [Lactobacillus jensenii 208-1] gi|297205571|ref|ZP_06922967.1| NAD-dependent DNA ligase LigA [Lactobacillus jensenii JV-V16] gi|256615308|gb|EEU20499.1| DNA ligase, NAD-dependent [Lactobacillus jensenii 27-2-CHN] gi|260547453|gb|EEX23432.1| DNA ligase, NAD-dependent [Lactobacillus jensenii 115-3-CHN] gi|281301075|gb|EFA93386.1| DNA ligase (NAD(+)) [Lactobacillus jensenii 208-1] gi|297150149|gb|EFH30446.1| NAD-dependent DNA ligase LigA [Lactobacillus jensenii JV-V16] Length = 669 Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+K A E+E L K + YY D P D +YD+ ++L L++QFPEL D Sbjct: 4 LNKKNAQEEIETLRKKLNTWAEQYYAQDAPSVEDAVYDQNYQKLVELEKQFPELVTPDSI 63 Query: 114 WNTVG 118 VG Sbjct: 64 TQRVG 68 >gi|55821530|ref|YP_139972.1| NAD-dependent DNA ligase LigA [Streptococcus thermophilus LMG 18311] gi|55823458|ref|YP_141899.1| NAD-dependent DNA ligase LigA [Streptococcus thermophilus CNRZ1066] gi|81559086|sp|Q5LYL9|DNLJ_STRT1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|81560280|sp|Q5M382|DNLJ_STRT2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|55737515|gb|AAV61157.1| DNA ligase [Streptococcus thermophilus LMG 18311] gi|55739443|gb|AAV63084.1| DNA ligase [Streptococcus thermophilus CNRZ1066] Length = 652 Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + K YY D+P +D YD++ L L+ + PEL D P + VG Sbjct: 14 QYAKEYYTEDNPSVSDAEYDKLYRELVTLEAEHPELVQADSPTHRVG 60 >gi|94310370|ref|YP_583580.1| DNA ligase, NAD-dependent [Cupriavidus metallidurans CH34] gi|123383876|sp|Q1LNG5|DNLJ_RALME RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|93354222|gb|ABF08311.1| DNA ligase, NAD(+)-dependent [Cupriavidus metallidurans CH34] Length = 721 Score = 37.0 bits (84), Expect = 0.84, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YD + L AL+ + PEL D P VG Sbjct: 38 YYVLDAPTIPDADYDALFIELQALEAEHPELLTPDSPTQRVG 79 >gi|332188479|ref|ZP_08390201.1| DNA ligase, NAD-dependent [Sphingomonas sp. S17] gi|332011491|gb|EGI53574.1| DNA ligase, NAD-dependent [Sphingomonas sp. S17] Length = 712 Score = 37.0 bits (84), Expect = 0.85, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH + Y+ D P +D YD + R A++ FP L D P VG Sbjct: 27 HHNRLYHTEDAPEISDADYDALIRRNMAIEAAFPHLIRSDSPNRQVG 73 >gi|166216285|sp|Q03JF6|DNLJ_STRTD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 652 Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + K YY D+P +D YD++ L L+ + PEL D P + VG Sbjct: 14 QYAKEYYTEDNPSVSDAEYDKLYRELVTLEAEHPELVQADSPTHRVG 60 >gi|87123447|ref|ZP_01079298.1| BRCT domain:NAD-dependent DNA ligase N-terminus [Synechococcus sp. RS9917] gi|86169167|gb|EAQ70423.1| BRCT domain:NAD-dependent DNA ligase N-terminus [Synechococcus sp. RS9917] Length = 694 Score = 37.0 bits (84), Expect = 0.85, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 GE E+ L+ A H YY LD P D +YDR+ L L++ P L D P Sbjct: 6 GERARELRTLLNRAAHA---YYVLDAPEMEDPVYDRLYRELVELEQADPSLCSPDSPTQR 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|261366975|ref|ZP_05979858.1| DNA ligase, NAD-dependent [Subdoligranulum variabile DSM 15176] gi|282571093|gb|EFB76628.1| DNA ligase, NAD-dependent [Subdoligranulum variabile DSM 15176] Length = 661 Score = 37.0 bits (84), Expect = 0.86, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A E L + + + YY D P D YD ++ L A++ +FP+L + P Sbjct: 1 MEREQAQKRAEELRAVIEKNNRLYYDQDAPELEDFEYDALTRELKAIETEFPDLVTPESP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQHVG 65 >gi|39995996|ref|NP_951947.1| DNA ligase, NAD-dependent [Geobacter sulfurreducens PCA] gi|81702997|sp|Q74ER9|DNLJ_GEOSL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|39982761|gb|AAR34220.1| DNA ligase, NAD-dependent [Geobacter sulfurreducens PCA] gi|298505011|gb|ADI83734.1| DNA ligase, NAD-dependent [Geobacter sulfurreducens KN400] Length = 670 Score = 37.0 bits (84), Expect = 0.86, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H + YY D P TD YD + L L+ +FP+L D P VG Sbjct: 20 HNRLYYAEDRPEITDAEYDLLFRELVDLETRFPDLAAPDSPTQRVG 65 >gi|312278868|gb|ADQ63525.1| DNA ligase [Streptococcus thermophilus ND03] Length = 648 Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + K YY D+P +D YD++ L L+ + PEL D P + VG Sbjct: 10 QYAKEYYTEDNPSVSDAEYDKLYRELVTLEAEHPELVQADSPTHRVG 56 >gi|116628243|ref|YP_820862.1| NAD-dependent DNA ligase LigA [Streptococcus thermophilus LMD-9] gi|116101520|gb|ABJ66666.1| NAD-dependent DNA ligase [Streptococcus thermophilus LMD-9] Length = 648 Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + K YY D+P +D YD++ L L+ + PEL D P + VG Sbjct: 10 QYAKEYYTEDNPSVSDAEYDKLYRELVTLEAEHPELVQADSPTHRVG 56 >gi|237745525|ref|ZP_04576005.1| DNA ligase [Oxalobacter formigenes HOxBLS] gi|229376876|gb|EEO26967.1| DNA ligase [Oxalobacter formigenes HOxBLS] Length = 685 Score = 37.0 bits (84), Expect = 0.88, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P+ D YDRV L L+ +PEL P VG Sbjct: 33 YYVLDAPVVPDAEYDRVFRELQELEAAYPELVVPGSPTQRVG 74 >gi|205372454|ref|ZP_03225267.1| NAD-dependent DNA ligase LigA [Bacillus coahuilensis m4-4] Length = 635 Score = 37.0 bits (84), Expect = 0.88, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P +D YD + L A++++FPEL D P +G Sbjct: 24 YYVLDKPQVSDQEYDSKLQELIAIEQEFPELKTPDSPSERIG 65 >gi|146168649|ref|XP_001471359.1| hypothetical protein TTHERM_00490927 [Tetrahymena thermophila] gi|146145195|gb|EDK31677.1| hypothetical protein TTHERM_00490927 [Tetrahymena thermophila SB210] Length = 704 Score = 37.0 bits (84), Expect = 0.89, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 2/99 (2%) Query: 8 FRSSKFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAM-IEVEYL 66 FR F +++NI+ Q + + FL K+ L + + K+VT+++KG + +E +Y Sbjct: 200 FRIKLFASQYNISSQQNQVSYRNQFIFLNPKQTLLTTISAQKQVTTVNKGFLIQVESKYS 259 Query: 67 VKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 I + Q Y LD+ + Y +V E + ++ QFP Sbjct: 260 FPIQFNQQNQSYELDNKPLSQVSY-QVDEVIQYIEIQFP 297 >gi|15606063|ref|NP_213440.1| DNA ligase (NAD dependent) [Aquifex aeolicus VF5] gi|7673992|sp|O66880|DNLJ_AQUAE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|2983242|gb|AAC06838.1| DNA ligase (NAD dependent) [Aquifex aeolicus VF5] Length = 720 Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 36/74 (48%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 L K K V LS EA E L ++ +H YY +P+ D YDR+ L +++++ Sbjct: 18 LRKIKDVKVLSFEEAKKLAEDLREVIRYHDYKYYVEANPVIPDYDYDRLFRALKEIEKKY 77 Query: 105 PELFDEDHPWNTVG 118 PEL D P V Sbjct: 78 PELITPDSPTQRVA 91 >gi|23013561|ref|ZP_00053441.1| COG0272: NAD-dependent DNA ligase (contains BRCT domain type II) [Magnetospirillum magnetotacticum MS-1] Length = 696 Score = 37.0 bits (84), Expect = 0.90, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 29/54 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 L+ EA IE LV+ + + Y+ D PL D +YD RL ++ +FPEL Sbjct: 11 LTPFEARIEHAELVEKLVSWDEAYHGQDAPLVPDDVYDGAKRRLSGIEARFPEL 64 >gi|291542878|emb|CBL15988.1| DNA ligase, NAD-dependent [Ruminococcus bromii L2-63] Length = 661 Score = 37.0 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L K +H YY D+P +D YD + L+ ++++FP L P N VG Sbjct: 13 LTKQLEYHNNLYYNQDEPEISDYDYDMLMRELENIEKEFPSLKSPMSPTNRVG 65 >gi|186476101|ref|YP_001857571.1| DNA ligase, NAD-dependent [Burkholderia phymatum STM815] gi|254781277|sp|B2JID1|DNLJ_BURP8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|184192560|gb|ACC70525.1| DNA ligase, NAD-dependent [Burkholderia phymatum STM815] Length = 683 Score = 37.0 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ + L ++ + P+L D P VG Sbjct: 32 YYVLDQPDLPDAEYDRLFKELQQIESEHPDLITPDSPTQRVG 73 >gi|167624496|ref|YP_001674790.1| DNA ligase, NAD-dependent [Shewanella halifaxensis HAW-EB4] gi|190359286|sp|B0TKB2|DNLJ_SHEHH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|167354518|gb|ABZ77131.1| DNA ligase, NAD-dependent [Shewanella halifaxensis HAW-EB4] Length = 667 Score = 37.0 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 25/57 (43%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L H YY D P D YDR+ RL AL+ + P+ D P VG Sbjct: 7 EIAQLTAELNQHNYRYYVDDSPSIPDSEYDRLLNRLKALETEHPQFCLADSPTQRVG 63 >gi|208434535|ref|YP_002266201.1| DNA ligase [Helicobacter pylori G27] gi|254781346|sp|B5Z6Y6|DNLJ_HELPG RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|208432464|gb|ACI27335.1| DNA ligase [Helicobacter pylori G27] Length = 658 Score = 37.0 bits (84), Expect = 0.94, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 8/60 (13%) Query: 64 EYLVKIAL-----HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL +IA HH YY LD+ + +D +YD + + L A +E+ P + P VG Sbjct: 7 EYLERIAYLNTLSHH---YYNLDESIVSDAVYDELYQELKAYEEKNPNDIQANSPTQKVG 63 >gi|197336238|ref|YP_002156719.1| DNA ligase, NAD-dependent [Vibrio fischeri MJ11] gi|254781450|sp|B5FGU7|DNLJ_VIBFM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|197317728|gb|ACH67175.1| DNA ligase, NAD-dependent [Vibrio fischeri MJ11] Length = 668 Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY D P D YDR+ + L +++ + PEL D P VG Sbjct: 16 YHAYRYYVEDSPELPDAEYDRMMQELLSIESEHPELVTVDSPSQRVG 62 >gi|227551668|ref|ZP_03981717.1| DNA ligase (NAD(+)) [Enterococcus faecium TX1330] gi|293377659|ref|ZP_06623848.1| DNA ligase (NAD(+)) [Enterococcus faecium PC4.1] gi|227179231|gb|EEI60203.1| DNA ligase (NAD(+)) [Enterococcus faecium TX1330] gi|292643659|gb|EFF61780.1| DNA ligase (NAD(+)) [Enterococcus faecium PC4.1] Length = 679 Score = 37.0 bits (84), Expect = 0.96, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 24/44 (54%) Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + YY D P D +YD+ L A++EQ+P+L D P VG Sbjct: 27 REYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDSPTQRVG 70 >gi|254479199|ref|ZP_05092546.1| NAD-dependent DNA ligase adenylation domain subfamily [Carboxydibrachium pacificum DSM 12653] gi|214034862|gb|EEB75589.1| NAD-dependent DNA ligase adenylation domain subfamily [Carboxydibrachium pacificum DSM 12653] Length = 271 Score = 37.0 bits (84), Expect = 0.96, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + EA +E L + +H YY LD P +D YD + L L+E++PE D P Sbjct: 15 MDREEARKRIEELREKINYHNYRYYVLDQPEISDYEYDMLMRELIELEEKYPEFKTPDSP 74 Query: 114 WNTVG 118 VG Sbjct: 75 SQRVG 79 >gi|293557127|ref|ZP_06675681.1| DNA ligase, NAD-dependent [Enterococcus faecium E1039] gi|294614139|ref|ZP_06694060.1| DNA ligase, NAD-dependent [Enterococcus faecium E1636] gi|291592989|gb|EFF24577.1| DNA ligase, NAD-dependent [Enterococcus faecium E1636] gi|291600696|gb|EFF30994.1| DNA ligase, NAD-dependent [Enterococcus faecium E1039] Length = 679 Score = 37.0 bits (84), Expect = 0.97, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 24/44 (54%) Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + YY D P D +YD+ L A++EQ+P+L D P VG Sbjct: 27 REYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDSPTQRVG 70 >gi|257895732|ref|ZP_05675385.1| NAD-dependent DNA ligase [Enterococcus faecium Com12] gi|257832297|gb|EEV58718.1| NAD-dependent DNA ligase [Enterococcus faecium Com12] Length = 678 Score = 37.0 bits (84), Expect = 0.97, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 24/44 (54%) Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + YY D P D +YD+ L A++EQ+P+L D P VG Sbjct: 26 REYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDSPTQRVG 69 >gi|257887196|ref|ZP_05666849.1| NAD-dependent DNA ligase [Enterococcus faecium 1,141,733] gi|257823250|gb|EEV50182.1| NAD-dependent DNA ligase [Enterococcus faecium 1,141,733] Length = 678 Score = 37.0 bits (84), Expect = 0.97, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 24/44 (54%) Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + YY D P D +YD+ L A++EQ+P+L D P VG Sbjct: 26 REYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDSPTQRVG 69 >gi|257884412|ref|ZP_05664065.1| NAD-dependent DNA ligase [Enterococcus faecium 1,231,501] gi|257898303|ref|ZP_05677956.1| NAD-dependent DNA ligase [Enterococcus faecium Com15] gi|257820250|gb|EEV47398.1| NAD-dependent DNA ligase [Enterococcus faecium 1,231,501] gi|257836215|gb|EEV61289.1| NAD-dependent DNA ligase [Enterococcus faecium Com15] Length = 678 Score = 37.0 bits (84), Expect = 0.97, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 24/44 (54%) Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + YY D P D +YD+ L A++EQ+P+L D P VG Sbjct: 26 REYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDSPTQRVG 69 >gi|293571852|ref|ZP_06682868.1| DNA ligase, NAD-dependent [Enterococcus faecium E980] gi|291608106|gb|EFF37412.1| DNA ligase, NAD-dependent [Enterococcus faecium E980] Length = 679 Score = 37.0 bits (84), Expect = 0.98, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 24/44 (54%) Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + YY D P D +YD+ L A++EQ+P+L D P VG Sbjct: 27 REYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDSPTQRVG 70 >gi|326804258|ref|YP_004322076.1| DNA ligase (NAD+) [Aerococcus urinae ACS-120-V-Col10a] gi|326651204|gb|AEA01387.1| DNA ligase (NAD+) [Aerococcus urinae ACS-120-V-Col10a] Length = 677 Score = 37.0 bits (84), Expect = 0.98, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P +D YD+ +L+ L+ P+L D P VG Sbjct: 32 YYVLDQPSVSDDHYDKTYRQLEELEASHPDLIQSDSPTQRVG 73 >gi|88658391|ref|YP_507122.1| DNA ligase, NAD-dependent [Ehrlichia chaffeensis str. Arkansas] gi|123763773|sp|Q2GHG1|DNLJ_EHRCR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|88599848|gb|ABD45317.1| DNA ligase, NAD-dependent [Ehrlichia chaffeensis str. Arkansas] Length = 676 Score = 37.0 bits (84), Expect = 0.98, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A +E++ L K HH YY D+P +D YD + + + + FP+L + N + Sbjct: 6 KAKLELDKLNKQIQHHDVLYYVQDNPEISDAEYDELCRKRNLILNAFPKLTQSNDYQNNI 65 Query: 118 G 118 G Sbjct: 66 G 66 >gi|228989472|ref|ZP_04149457.1| DNA ligase [Bacillus pseudomycoides DSM 12442] gi|228770197|gb|EEM18776.1| DNA ligase [Bacillus pseudomycoides DSM 12442] Length = 669 Score = 37.0 bits (84), Expect = 0.99, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK EA +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEEAKQRIEELRDMLNAFNYQYHVLDNPSVSDAEYDRDMQELIKLEAENPEFLIEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TVRVG 65 >gi|330973309|gb|EGH73375.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. aceris str. M302273PT] Length = 670 Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 17 QHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|257878462|ref|ZP_05658115.1| NAD-dependent DNA ligase [Enterococcus faecium 1,230,933] gi|257889341|ref|ZP_05668994.1| NAD-dependent DNA ligase [Enterococcus faecium 1,231,410] gi|257894353|ref|ZP_05674006.1| NAD-dependent DNA ligase [Enterococcus faecium 1,231,408] gi|258616016|ref|ZP_05713786.1| DNA ligase, NAD-dependent [Enterococcus faecium DO] gi|257812690|gb|EEV41448.1| NAD-dependent DNA ligase [Enterococcus faecium 1,230,933] gi|257825701|gb|EEV52327.1| NAD-dependent DNA ligase [Enterococcus faecium 1,231,410] gi|257830732|gb|EEV57339.1| NAD-dependent DNA ligase [Enterococcus faecium 1,231,408] Length = 678 Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 24/44 (54%) Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + YY D P D +YD+ L A++EQ+P+L D P VG Sbjct: 26 REYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDSPTQRVG 69 >gi|254779395|ref|YP_003057500.1| NAD-dependent DNA ligase LigA [Helicobacter pylori B38] gi|254001306|emb|CAX29287.1| DNA ligase (NAD(+)) [Helicobacter pylori B38] Length = 656 Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 8/60 (13%) Query: 64 EYLVKIAL-----HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL +IA HH YY LD+ + +D +YD + + L A +E+ P + P VG Sbjct: 7 EYLERIAYLNTLSHH---YYNLDESIVSDAVYDELYQELKAYEEENPNDIQANSPTQKVG 63 >gi|260063119|ref|YP_003196199.1| DNA ligase [Robiginitalea biformata HTCC2501] gi|88784688|gb|EAR15858.1| DNA ligase [Robiginitalea biformata HTCC2501] Length = 673 Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P+ +D +D + L L++Q PE +D P VG Sbjct: 24 HNYRYYVLDEPVISDYDFDMKLKALQDLEKQHPEFYDPASPTQRVG 69 >gi|302336117|ref|YP_003801324.1| DNA ligase, NAD-dependent [Olsenella uli DSM 7084] gi|301319957|gb|ADK68444.1| DNA ligase, NAD-dependent [Olsenella uli DSM 7084] Length = 747 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LDDP TD +DR+ L AL+ PEL + +G Sbjct: 62 YYALDDPEMTDAEFDRLLVELQALESAHPELVSPESYTQRIG 103 >gi|220912112|ref|YP_002487421.1| DNA ligase, NAD-dependent [Arthrobacter chlorophenolicus A6] gi|254778146|sp|B8HFJ3|DNLJ1_ARTCA RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 1 gi|219858990|gb|ACL39332.1| DNA ligase, NAD-dependent [Arthrobacter chlorophenolicus A6] Length = 770 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 29/57 (50%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E E L + ++ YY+ D PL +D +D + RL+ ++ PEL D P VG Sbjct: 32 EYENLSDLIRKYRFAYYQDDAPLVSDAEFDTLFRRLEEIEALHPELVANDSPTQEVG 88 >gi|318040766|ref|ZP_07972722.1| NAD-dependent DNA ligase LigA [Synechococcus sp. CB0101] Length = 690 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L+ A H YY LD P D +YDR+ L L+ PEL D P VG Sbjct: 19 ELRQLLNRAAHA---YYVLDAPEMEDPVYDRLYRELLDLETAHPELIAPDSPTQRVG 72 >gi|69246831|ref|ZP_00604140.1| NAD-dependent DNA ligase [Enterococcus faecium DO] gi|260560049|ref|ZP_05832227.1| NAD-dependent DNA ligase [Enterococcus faecium C68] gi|293559999|ref|ZP_06676507.1| DNA ligase, NAD-dependent [Enterococcus faecium E1162] gi|294621040|ref|ZP_06700232.1| DNA ligase, NAD-dependent [Enterococcus faecium U0317] gi|314937827|ref|ZP_07845144.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0133a04] gi|314941627|ref|ZP_07848507.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0133C] gi|314948874|ref|ZP_07852243.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0082] gi|314951008|ref|ZP_07854075.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0133A] gi|314993009|ref|ZP_07858405.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0133B] gi|314996456|ref|ZP_07861499.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0133a01] gi|68195064|gb|EAN09526.1| NAD-dependent DNA ligase [Enterococcus faecium DO] gi|260073884|gb|EEW62208.1| NAD-dependent DNA ligase [Enterococcus faecium C68] gi|291599354|gb|EFF30379.1| DNA ligase, NAD-dependent [Enterococcus faecium U0317] gi|291606087|gb|EFF35513.1| DNA ligase, NAD-dependent [Enterococcus faecium E1162] gi|313589438|gb|EFR68283.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0133a01] gi|313592532|gb|EFR71377.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0133B] gi|313596863|gb|EFR75708.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0133A] gi|313599518|gb|EFR78361.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0133C] gi|313642858|gb|EFS07438.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0133a04] gi|313644664|gb|EFS09244.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0082] Length = 679 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 24/44 (54%) Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + YY D P D +YD+ L A++EQ+P+L D P VG Sbjct: 27 REYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDSPTQRVG 70 >gi|293569137|ref|ZP_06680444.1| DNA ligase, NAD-dependent [Enterococcus faecium E1071] gi|291588184|gb|EFF20025.1| DNA ligase, NAD-dependent [Enterococcus faecium E1071] Length = 679 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 24/44 (54%) Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + YY D P D +YD+ L A++EQ+P+L D P VG Sbjct: 27 REYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDSPTQRVG 70 >gi|291536367|emb|CBL09479.1| DNA ligase, NAD-dependent [Roseburia intestinalis M50/1] Length = 671 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY D P +D +D + ++L L+++ PEL +D P VG Sbjct: 16 YHSDRYYNQDSPEISDYEFDMLMQQLKKLEKEHPELVTKDSPTQHVG 62 >gi|261207462|ref|ZP_05922148.1| NAD-dependent DNA ligase [Enterococcus faecium TC 6] gi|289565873|ref|ZP_06446314.1| DNA ligase, NAD-dependent [Enterococcus faecium D344SRF] gi|294618097|ref|ZP_06697694.1| DNA ligase, NAD-dependent [Enterococcus faecium E1679] gi|260078353|gb|EEW66058.1| NAD-dependent DNA ligase [Enterococcus faecium TC 6] gi|289162333|gb|EFD10192.1| DNA ligase, NAD-dependent [Enterococcus faecium D344SRF] gi|291595669|gb|EFF26965.1| DNA ligase, NAD-dependent [Enterococcus faecium E1679] Length = 679 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 24/44 (54%) Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + YY D P D +YD+ L A++EQ+P+L D P VG Sbjct: 27 REYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDSPTQRVG 70 >gi|240145659|ref|ZP_04744260.1| DNA ligase, NAD-dependent [Roseburia intestinalis L1-82] gi|257202247|gb|EEV00532.1| DNA ligase, NAD-dependent [Roseburia intestinalis L1-82] Length = 671 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY D P +D +D + ++L L+++ PEL +D P VG Sbjct: 16 YHSDRYYNQDSPEISDYEFDMLMQQLKKLEKEHPELVTKDSPTQHVG 62 >gi|291299865|ref|YP_003511143.1| DNA ligase NAD-dependent [Stackebrandtia nassauensis DSM 44728] gi|290569085|gb|ADD42050.1| DNA ligase, NAD-dependent [Stackebrandtia nassauensis DSM 44728] Length = 749 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H++ Y+R D P +D YD + L A++E P L +D P VG Sbjct: 32 HRQLYHRDDAPQISDAEYDALMRELLAIEEAHPVLATQDSPSQQVG 77 >gi|228995667|ref|ZP_04155330.1| DNA ligase [Bacillus mycoides Rock3-17] gi|228764044|gb|EEM12928.1| DNA ligase [Bacillus mycoides Rock3-17] Length = 669 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK EA +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEEAKQRIEELRDMLNAFNYQYHVLDNPSVSDAEYDRDMQELIKLEAENPEFLIEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TVRVG 65 >gi|148927169|ref|ZP_01810794.1| DNA ligase, NAD-dependent [candidate division TM7 genomosp. GTL1] gi|147887384|gb|EDK72833.1| DNA ligase, NAD-dependent [candidate division TM7 genomosp. GTL1] Length = 675 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D +YD + L L+ + PEL D P VG Sbjct: 24 YYVLDRPSVADAIYDSLFGELKKLEAEHPELITADSPTQRVG 65 >gi|153956079|ref|YP_001396844.1| LigA1 [Clostridium kluyveri DSM 555] gi|219856414|ref|YP_002473536.1| hypothetical protein CKR_3071 [Clostridium kluyveri NBRC 12016] gi|190359246|sp|A5N2X7|DNLJ_CLOK5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781297|sp|B9DWM9|DNLJ_CLOK1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|146348937|gb|EDK35473.1| LigA1 [Clostridium kluyveri DSM 555] gi|219570138|dbj|BAH08122.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 663 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L KI +H YY DDP TD YD++ L L+ PE + P VG Sbjct: 7 IDELRKIIEYHNDKYYNQDDPEITDYEYDKLYVELRNLENSHPEYKIQSSPTQKVG 62 >gi|291538763|emb|CBL11874.1| DNA ligase, NAD-dependent [Roseburia intestinalis XB6B4] Length = 671 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY D P +D +D + ++L L+++ PEL +D P VG Sbjct: 16 YHSDRYYNQDSPEISDYEFDMLMQQLKKLEKEHPELVTKDSPTQHVG 62 >gi|257882881|ref|ZP_05662534.1| NAD-dependent DNA ligase [Enterococcus faecium 1,231,502] gi|257818539|gb|EEV45867.1| NAD-dependent DNA ligase [Enterococcus faecium 1,231,502] Length = 674 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 24/44 (54%) Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + YY D P D +YD+ L A++EQ+P+L D P VG Sbjct: 22 REYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDSPTQRVG 65 >gi|229003296|ref|ZP_04161126.1| DNA ligase [Bacillus mycoides Rock1-4] gi|228757914|gb|EEM07129.1| DNA ligase [Bacillus mycoides Rock1-4] Length = 669 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK EA +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEEAKQRIEELRDMLNAFNYQYHVLDNPSVSDAEYDRDMQELIKLEAENPEFLIEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TVRVG 65 >gi|225377122|ref|ZP_03754343.1| hypothetical protein ROSEINA2194_02767 [Roseburia inulinivorans DSM 16841] gi|225211027|gb|EEG93381.1| hypothetical protein ROSEINA2194_02767 [Roseburia inulinivorans DSM 16841] Length = 668 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A + L K +H YY D P +D YD + + L L+++ PEL D P Sbjct: 1 MKKMSAEERIAELKKTLEYHIDRYYNQDSPEISDYEYDMMMQELKNLEKEHPELVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|171322051|ref|ZP_02910925.1| DNA ligase, NAD-dependent [Burkholderia ambifaria MEX-5] gi|171092642|gb|EDT37943.1| DNA ligase, NAD-dependent [Burkholderia ambifaria MEX-5] Length = 691 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L L+ PEL D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFGELQQLETDHPELVTPDSPTQRVG 72 >gi|325110927|ref|YP_004271995.1| DNA ligase [Planctomyces brasiliensis DSM 5305] gi|324971195|gb|ADY61973.1| DNA ligase [Planctomyces brasiliensis DSM 5305] Length = 675 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H + YY P TD +DR+ RL L++Q PE D P VG Sbjct: 19 HNRLYYVEAQPEITDREFDRLLNRLIDLEQQHPEFQSPDSPTQKVG 64 >gi|134296034|ref|YP_001119769.1| DNA ligase [Burkholderia vietnamiensis G4] gi|166215568|sp|A4JF81|DNLJ_BURVG RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|134139191|gb|ABO54934.1| DNA ligase, NAD-dependent [Burkholderia vietnamiensis G4] Length = 691 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L L+ PEL D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFGELQQLEADHPELVTPDSPTQRVG 72 >gi|327402054|ref|YP_004342892.1| DNA ligase [Fluviicola taffensis DSM 16823] gi|327317562|gb|AEA42054.1| DNA ligase [Fluviicola taffensis DSM 16823] Length = 670 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EA +++E L K H YY +P +D +D + + L L+ QFPEL + P V Sbjct: 5 EAQLKIEQLTKELTLHNHNYYVESNPTISDYEFDVLLKELQDLETQFPELASDLSPTKRV 64 Query: 118 G 118 G Sbjct: 65 G 65 >gi|85713360|ref|ZP_01044373.1| NAD-dependent DNA ligase [Idiomarina baltica OS145] gi|85692818|gb|EAQ30803.1| NAD-dependent DNA ligase [Idiomarina baltica OS145] Length = 449 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + K YY LD+P D YD++ L L+ PEL + P VG Sbjct: 21 YNKEYYELDEPTIPDSEYDKLFRELQTLEANNPELKSQHSPTEKVG 66 >gi|312114833|ref|YP_004012429.1| DNA ligase, NAD-dependent [Rhodomicrobium vannielii ATCC 17100] gi|311219962|gb|ADP71330.1| DNA ligase, NAD-dependent [Rhodomicrobium vannielii ATCC 17100] Length = 777 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 3/71 (4%) Query: 49 KKVTSLSKGEAMIEVEYLV-KIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 K LS +A E + L +IA H Y+ P +D YDR+ RL+AL+ FP L Sbjct: 54 KHAEHLSAEDAKDEHDALAAEIARH--DLLYQDAAPEISDAEYDRLRLRLNALEAAFPSL 111 Query: 108 FDEDHPWNTVG 118 + P TVG Sbjct: 112 ITPESPSQTVG 122 >gi|254465633|ref|ZP_05079044.1| DNA ligase, NAD-dependent [Rhodobacterales bacterium Y4I] gi|206686541|gb|EDZ47023.1| DNA ligase, NAD-dependent [Rhodobacterales bacterium Y4I] Length = 750 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 34/73 (46%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 + K VT+L+ +A E L Y++ D P +D YD + +R AL E FP Sbjct: 4 NSEKDVTALTAEDARAEFLALEDQLRAADLAYHQADAPEISDAEYDSLKQRYRALAEAFP 63 Query: 106 ELFDEDHPWNTVG 118 +L D + VG Sbjct: 64 DLADAATHLDAVG 76 >gi|114563631|ref|YP_751144.1| DNA ligase, NAD-dependent [Shewanella frigidimarina NCIMB 400] gi|122299383|sp|Q080K9|DNLJ_SHEFN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|114334924|gb|ABI72306.1| DNA ligase, NAD-dependent [Shewanella frigidimarina NCIMB 400] Length = 670 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 26/57 (45%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E++ L H YY D P D YDR+ +RL L+ +P+ D P VG Sbjct: 7 EMDQLTHTINQHNIRYYVDDAPSIPDAEYDRLIKRLTELEGDYPQFKSVDSPTQRVG 63 >gi|117926963|ref|YP_867580.1| Fis family transcriptional regulator [Magnetococcus sp. MC-1] gi|166215818|sp|A0LDY1|DNLJ_MAGSM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|117610719|gb|ABK46174.1| transcriptional regulator, Fis family [Magnetococcus sp. MC-1] Length = 768 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H+ Y+ LD L +D YDR+ L +L+ P L D P + VG Sbjct: 15 HYAHSYHTLDTSLVSDAEYDRLFRELQSLEAADPTLISADSPTHRVG 61 >gi|260436246|ref|ZP_05790216.1| DNA ligase, NAD-dependent [Synechococcus sp. WH 8109] gi|260414120|gb|EEX07416.1| DNA ligase, NAD-dependent [Synechococcus sp. WH 8109] Length = 680 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E E+ +L+ A H YY LD P+ D +YDR+ L L++ P L D P V Sbjct: 6 ERAAELRHLLNRAGHA---YYVLDAPVMEDAVYDRLYRELLELEQNDPGLQRPDSPTQRV 62 Query: 118 G 118 G Sbjct: 63 G 63 >gi|325143946|gb|EGC66256.1| DNA ligase, NAD-dependent [Neisseria meningitidis M01-240013] gi|325206489|gb|ADZ01942.1| DNA ligase, NAD-dependent [Neisseria meningitidis M04-240196] Length = 841 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 36/83 (43%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PE D P VG Sbjct: 63 ELEALELNHPEFKLPDSPTQRVG 85 >gi|66045063|ref|YP_234904.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. syringae B728a] gi|75502608|sp|Q4ZVF6|DNLJ_PSEU2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|63255770|gb|AAY36866.1| NAD-dependent DNA ligase [Pseudomonas syringae pv. syringae B728a] Length = 787 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 17 QHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|320173862|gb|EFW49042.1| DNA ligase [Shigella dysenteriae CDC 74-1112] Length = 671 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L L+ + EL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDAEYDRLMRELRELETKHLELITPDSPTQRVG 63 >gi|161760708|ref|YP_062356.2| NAD-dependent DNA ligase LigA [Leifsonia xyli subsp. xyli str. CTCB07] Length = 755 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 32/62 (51%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 +A E + L L + YY LD L +D YDR+ RL+ L+ PEL +D P T Sbjct: 11 ADARAEAQGLTTRILELRDAYYELDTVLVSDEEYDRMLRRLEELERLHPELQSQDSPTQT 70 Query: 117 VG 118 VG Sbjct: 71 VG 72 >gi|330960233|gb|EGH60493.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. maculicola str. ES4326] Length = 787 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 17 QHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|330897709|gb|EGH29128.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. japonica str. M301072PT] Length = 657 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 18 HNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|237799321|ref|ZP_04587782.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022177|gb|EGI02234.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. oryzae str. 1_6] Length = 703 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 17 QHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|308233598|ref|ZP_07664335.1| DNA ligase, NAD-dependent [Atopobium vaginae DSM 15829] gi|328944216|ref|ZP_08241680.1| DNA ligase [Atopobium vaginae DSM 15829] gi|327491135|gb|EGF22910.1| DNA ligase [Atopobium vaginae DSM 15829] Length = 792 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 29/56 (51%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V L K+ +H YY LD PL TD +D + L L++ +P L DE + +G Sbjct: 87 VRELRKLLEYHAYRYYALDAPLITDNQFDSYLQELLHLEKTYPYLDDEHSYTHRIG 142 >gi|330981936|gb|EGH80039.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 787 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 17 QHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|218710253|ref|YP_002417874.1| NAD-dependent DNA ligase LigA [Vibrio splendidus LGP32] gi|254782307|sp|B7VIK3|DNLJ_VIBSL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218323272|emb|CAV19449.1| DNA ligase [Vibrio splendidus LGP32] Length = 670 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 31/63 (49%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 K + +E L + +H YY D P D YDR+ ++L ++++ PEL D P Sbjct: 2 KESIQVTLEQLRETLHYHAVRYYVEDSPEIPDVEYDRLMQQLLKIEDENPELVTVDSPSQ 61 Query: 116 TVG 118 VG Sbjct: 62 RVG 64 >gi|81390835|sp|Q6AEE5|DNLJ_LEIXX RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|50951550|gb|AAT89251.1| DNA ligase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 747 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 32/62 (51%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 +A E + L L + YY LD L +D YDR+ RL+ L+ PEL +D P T Sbjct: 3 ADARAEAQGLTTRILELRDAYYELDTVLVSDEEYDRMLRRLEELERLHPELQSQDSPTQT 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|254252054|ref|ZP_04945372.1| NAD-dependent DNA ligase [Burkholderia dolosa AUO158] gi|124894663|gb|EAY68543.1| NAD-dependent DNA ligase [Burkholderia dolosa AUO158] Length = 691 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L L+ PEL D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFLELQQLEADHPELVTPDSPTQRVG 72 >gi|281414409|ref|ZP_06246151.1| DNA ligase, NAD-dependent [Micrococcus luteus NCTC 2665] Length = 248 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 28/57 (49%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E E LV+ + YY+ D P +D YD + RL+ L+ PEL D P VG Sbjct: 24 EYEDLVERVRAARTAYYQRDAPEISDAEYDALYRRLEDLEALHPELVSNDSPTQEVG 80 >gi|257066474|ref|YP_003152730.1| NAD-dependent DNA ligase LigA [Anaerococcus prevotii DSM 20548] gi|256798354|gb|ACV29009.1| DNA ligase, NAD-dependent [Anaerococcus prevotii DSM 20548] Length = 666 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+PL +DG YD++ + L L+E+ + D D P VG Sbjct: 21 YYTLDEPLVSDGEYDQIYDELRKLEEETGYVRD-DSPTQVVG 61 >gi|88703478|ref|ZP_01101194.1| DNA ligase [Congregibacter litoralis KT71] gi|88702192|gb|EAQ99295.1| DNA ligase [Congregibacter litoralis KT71] Length = 674 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 3/48 (6%) Query: 74 QKW---YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++W YY LD P D YD L L+E PEL D P VG Sbjct: 18 ERWNHEYYILDSPTVPDQEYDGALRELQTLEEAHPELRDASSPTQRVG 65 >gi|319943831|ref|ZP_08018112.1| DNA ligase [Lautropia mirabilis ATCC 51599] gi|319743064|gb|EFV95470.1| DNA ligase [Lautropia mirabilis ATCC 51599] Length = 779 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 23/48 (47%) Query: 71 LHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L H + YY D P D +YD + L L+ ++P L D P VG Sbjct: 35 LAHNRAYYEEDAPTVEDSVYDGLFLELQQLEARWPALLTPDSPTQRVG 82 >gi|330939980|gb|EGH43181.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. pisi str. 1704B] Length = 731 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 17 QHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|221198328|ref|ZP_03571374.1| DNA ligase, NAD-dependent [Burkholderia multivorans CGD2M] gi|221208267|ref|ZP_03581271.1| DNA ligase, NAD-dependent [Burkholderia multivorans CGD2] gi|221171915|gb|EEE04358.1| DNA ligase, NAD-dependent [Burkholderia multivorans CGD2] gi|221182260|gb|EEE14661.1| DNA ligase, NAD-dependent [Burkholderia multivorans CGD2M] Length = 691 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L L+ P+L D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFRELQQLESDHPDLVTPDSPTQRVG 72 >gi|325127826|gb|EGC50734.1| DNA ligase, NAD-dependent [Neisseria meningitidis N1568] Length = 841 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 35/83 (42%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTDLTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALELNHPELKLPDSPTQRVG 85 >gi|206890248|ref|YP_002249789.1| DNA ligase, NAD-dependent [Thermodesulfovibrio yellowstonii DSM 11347] gi|254781443|sp|B5YIF8|DNLJ_THEYD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|206742186|gb|ACI21243.1| DNA ligase, NAD-dependent [Thermodesulfovibrio yellowstonii DSM 11347] Length = 670 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+E LVK +H YY LD P+ +D YD + RL L+E++ + D P VG Sbjct: 11 EIEKLVKELNYHNYRYYVLDSPVISDEEYDMMLRRLKELEEKWGYILP-DSPTQRVG 66 >gi|307132386|ref|YP_003884402.1| DNA ligase, NAD(+)-dependent [Dickeya dadantii 3937] gi|306529915|gb|ADM99845.1| DNA ligase, NAD(+)-dependent [Dickeya dadantii 3937] Length = 683 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 28/58 (48%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++E L +H+ Y+ D P D YD++ L L++ PEL D P VG Sbjct: 17 VQIEALRAQLRYHEYKYHVEDAPEIPDAEYDKLMNALKTLEQAHPELVTPDSPTQRVG 74 >gi|221215451|ref|ZP_03588415.1| DNA ligase, NAD-dependent [Burkholderia multivorans CGD1] gi|221164635|gb|EED97117.1| DNA ligase, NAD-dependent [Burkholderia multivorans CGD1] Length = 691 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L L+ P+L D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFRELQQLESDHPDLVTPDSPTQRVG 72 >gi|163736311|ref|ZP_02143730.1| DNA ligase, NAD-dependent [Phaeobacter gallaeciensis BS107] gi|161390181|gb|EDQ14531.1| DNA ligase, NAD-dependent [Phaeobacter gallaeciensis BS107] Length = 752 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y++ DDP +D YD AL E FPEL D TVG Sbjct: 35 YHQADDPEISDADYDAKKREYRALAEHFPELADGATALETVG 76 >gi|161524425|ref|YP_001579437.1| DNA ligase, NAD-dependent [Burkholderia multivorans ATCC 17616] gi|189350820|ref|YP_001946448.1| NAD-dependent DNA ligase [Burkholderia multivorans ATCC 17616] gi|254781276|sp|A9AIK9|DNLJ_BURM1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|160341854|gb|ABX14940.1| DNA ligase, NAD-dependent [Burkholderia multivorans ATCC 17616] gi|189334842|dbj|BAG43912.1| NAD-dependent DNA ligase [Burkholderia multivorans ATCC 17616] Length = 691 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L L+ P+L D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFRELQQLESDHPDLVTPDSPTQRVG 72 >gi|317125504|ref|YP_004099616.1| DNA ligase, NAD-dependent [Intrasporangium calvum DSM 43043] gi|315589592|gb|ADU48889.1| DNA ligase, NAD-dependent [Intrasporangium calvum DSM 43043] Length = 715 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ D P +D YD + RL+AL+ Q+P L D P VG Sbjct: 36 YHVKDAPTISDAEYDGLIRRLNALEAQWPSLRTPDSPTQKVG 77 >gi|194289797|ref|YP_002005704.1| DNA ligase [Cupriavidus taiwanensis LMG 19424] gi|254781303|sp|B3R2C2|DNLJ_CUPTR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|193223632|emb|CAQ69639.1| DNA ligase [Cupriavidus taiwanensis LMG 19424] Length = 709 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 22/46 (47%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P D YD + L AL+ + PEL D P VG Sbjct: 38 HNYQYYVLDAPTVPDAEYDALFSELMALELEHPELQTPDSPTQRVG 83 >gi|163741160|ref|ZP_02148552.1| DNA ligase, NAD-dependent [Phaeobacter gallaeciensis 2.10] gi|161385513|gb|EDQ09890.1| DNA ligase, NAD-dependent [Phaeobacter gallaeciensis 2.10] Length = 741 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y++ DDP +D YD AL E FPEL D TVG Sbjct: 24 YHQADDPEISDADYDAKKREYRALAEHFPELADGATALETVG 65 >gi|121594439|ref|YP_986335.1| DNA ligase [Acidovorax sp. JS42] gi|166215384|sp|A1W7N4|DNLJ_ACISJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|120606519|gb|ABM42259.1| DNA ligase, NAD-dependent [Acidovorax sp. JS42] Length = 731 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 8/67 (11%) Query: 56 KGEAMIEVEYLVKIALHHQ--KW---YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 KG A++ + +K AL Q +W YY D P D YDR ++L AL+ +P+L Sbjct: 14 KGSALVATK--IK-ALREQLNRWAHEYYVQDTPSVPDAEYDRAFQQLQALEGAYPDLVTP 70 Query: 111 DHPWNTV 117 D P V Sbjct: 71 DSPTQRV 77 >gi|330428943|gb|AEC20277.1| DNA ligase [Pusillimonas sp. T7-7] Length = 698 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D P+ +D YD++ L L++ PEL + P VG Sbjct: 25 HNHRYYVQDAPVVSDAAYDKLMTELIELEQTHPELITPESPTQRVG 70 >gi|149928191|ref|ZP_01916436.1| DNA ligase (NAD+) [Limnobacter sp. MED105] gi|149823082|gb|EDM82322.1| DNA ligase (NAD+) [Limnobacter sp. MED105] Length = 597 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Query: 47 KAKKVTSLSKGEA-MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 K S S+GE+ + + L+ + + YY LD P D YD+V L ++ P Sbjct: 10 KGSGDNSDSRGESPTVAMRRLIDLLNRWEYAYYVLDAPEVPDSEYDKVYRSLQQIENNHP 69 Query: 106 ELFDEDHPWNTVG 118 EL D P VG Sbjct: 70 ELIQNDSPTQRVG 82 >gi|325133819|gb|EGC56475.1| DNA ligase, NAD-dependent [Neisseria meningitidis M13399] Length = 841 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 36/83 (43%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PE D P VG Sbjct: 63 ELEALELNHPEFKLPDSPTQRVG 85 >gi|89896634|ref|YP_520121.1| hypothetical protein DSY3888 [Desulfitobacterium hafniense Y51] gi|122997178|sp|Q24QL5|DNLJ_DESHY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|89336082|dbj|BAE85677.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 659 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P +D YD + + L L+++ PE D P VG Sbjct: 22 YYGLDQPTLSDAEYDALLQELIRLEKEHPEFLTPDSPSQRVG 63 >gi|219667570|ref|YP_002458005.1| DNA ligase, NAD-dependent [Desulfitobacterium hafniense DCB-2] gi|254781313|sp|B8FP44|DNLJ_DESHD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219537830|gb|ACL19569.1| DNA ligase, NAD-dependent [Desulfitobacterium hafniense DCB-2] Length = 659 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P +D YD + + L L+++ PE D P VG Sbjct: 22 YYGLDQPTLSDAEYDALLQELIRLEKEHPEFLTPDSPSQRVG 63 >gi|331013366|gb|EGH93422.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 787 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 18 HNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|330986172|gb|EGH84275.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. lachrymans str. M301315] Length = 787 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 18 HNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|320323491|gb|EFW79576.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. glycinea str. B076] Length = 787 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 18 HNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|302185110|ref|ZP_07261783.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. syringae 642] Length = 787 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 18 HNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|71737941|ref|YP_274013.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. phaseolicola 1448A] gi|123775130|sp|Q48KR2|DNLJ_PSE14 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|71558494|gb|AAZ37705.1| DNA ligase, NAD-dependent [Pseudomonas syringae pv. phaseolicola 1448A] gi|320329466|gb|EFW85458.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. glycinea str. race 4] Length = 787 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 18 HNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|317127163|ref|YP_004093445.1| DNA ligase, NAD-dependent [Bacillus cellulosilyticus DSM 2522] gi|315472111|gb|ADU28714.1| DNA ligase, NAD-dependent [Bacillus cellulosilyticus DSM 2522] Length = 670 Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++K + E++ L I + YY LD P +D YD++ L L+E +PE +D P Sbjct: 1 MAKDDIKQEIDRLTNILNDYAYHYYVLDQPKVSDAEYDQLLHELTKLEEAYPEWKRDDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SERVG 65 >gi|307692294|ref|ZP_07634531.1| DNA ligase, NAD-dependent [Ruminococcaceae bacterium D16] Length = 657 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY DDP +D YD RL+ L+ PEL D P VG Sbjct: 21 YYVKDDPTMSDYDYDHKLRRLEELEGAHPELITPDSPTQRVG 62 >gi|227523032|ref|ZP_03953081.1| NAD-dependent DNA ligase [Lactobacillus hilgardii ATCC 8290] gi|227089850|gb|EEI25162.1| NAD-dependent DNA ligase [Lactobacillus hilgardii ATCC 8290] Length = 675 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Query: 75 KW---YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 KW YY D P D +YD+ ++L L+ FP++ D P VG Sbjct: 24 KWADEYYTYDSPSVEDSVYDQTYQQLVDLETTFPQIVTPDSPTQKVG 70 >gi|227512904|ref|ZP_03942953.1| NAD-dependent DNA ligase [Lactobacillus buchneri ATCC 11577] gi|227083904|gb|EEI19216.1| NAD-dependent DNA ligase [Lactobacillus buchneri ATCC 11577] Length = 675 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Query: 75 KW---YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 KW YY D P D +YD+ ++L L+ FP++ D P VG Sbjct: 24 KWADEYYTYDSPSVEDSVYDQTYQQLVDLETTFPQIVTPDSPTQKVG 70 >gi|330889906|gb|EGH22567.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. mori str. 301020] Length = 787 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 18 HNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|282861257|ref|ZP_06270322.1| DNA ligase, NAD-dependent [Streptomyces sp. ACTE] gi|282563915|gb|EFB69452.1| DNA ligase, NAD-dependent [Streptomyces sp. ACTE] Length = 732 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 +A+++T +S EA L + H+ YY D P+ +D +DR+ L+A++++ P+ Sbjct: 6 QARELTGVS-AEARERHALLSEQIEEHRFRYYVKDQPVVSDAEFDRLMRELEAVEDENPQ 64 Query: 107 LFDEDHPWNTVG 118 L D P V Sbjct: 65 LRTPDSPTQKVA 76 >gi|86138407|ref|ZP_01056981.1| DNA ligase, NAD-dependent [Roseobacter sp. MED193] gi|85824932|gb|EAQ45133.1| DNA ligase, NAD-dependent [Roseobacter sp. MED193] Length = 752 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 52 TSLSKGEAMIE-VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + LS+ +A E +E ++A Q Y++ D P +D YD R L E FPEL D Sbjct: 10 SGLSQEQAQAEFLELQTQLAAADQA-YHQNDAPFLSDAAYDAAKRRYKVLAEAFPELKDI 68 Query: 111 DHPWNTVG 118 ++VG Sbjct: 69 ATQLDSVG 76 >gi|323359739|ref|YP_004226135.1| NAD-dependent DNA ligase [Microbacterium testaceum StLB037] gi|323276110|dbj|BAJ76255.1| NAD-dependent DNA ligase [Microbacterium testaceum StLB037] Length = 810 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 34/69 (49%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 ++ LS +A E L + ++ YY D L D YD RL+AL+ + PEL Sbjct: 6 QLPDLSLDDARAEAIDLTQRITDAREAYYGRDAELVDDATYDGWMHRLEALERRHPELQG 65 Query: 110 EDHPWNTVG 118 +D P +VG Sbjct: 66 QDSPTLSVG 74 >gi|295836378|ref|ZP_06823311.1| DNA ligase, NAD-dependent [Streptomyces sp. SPB74] gi|295825992|gb|EDY45591.2| DNA ligase, NAD-dependent [Streptomyces sp. SPB74] Length = 818 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H+ YY D P+ +D +D + RL AL+E+ P+L D P V Sbjct: 66 HRYRYYVNDQPVVSDADFDALLRRLTALEEEHPQLRTPDSPTQKVA 111 >gi|295135415|ref|YP_003586091.1| DNA ligase [Zunongwangia profunda SM-A87] gi|294983430|gb|ADF53895.1| DNA ligase [Zunongwangia profunda SM-A87] Length = 812 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY LD+P +D +D + L L+E+ PE D + P VG Sbjct: 16 HHNYQYYVLDNPEISDYDFDMKLKELQELEEKHPEFNDPNSPTQRVG 62 >gi|294155884|ref|YP_003560268.1| DNA ligase (NAD(+)) [Mycoplasma crocodyli MP145] gi|291600422|gb|ADE19918.1| DNA ligase (NAD(+)) [Mycoplasma crocodyli MP145] Length = 657 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Query: 64 EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E + KI ++ + YY LD P +D YD + + L +++Q P++ ++D P +G Sbjct: 11 ELIAKIKQYNNE-YYNLDQPSVSDAEYDALYKELLEIEKQNPKIINQDSPSQIIG 64 >gi|283458551|ref|YP_003363181.1| NAD-dependent DNA ligase [Rothia mucilaginosa DY-18] gi|283134596|dbj|BAI65361.1| NAD-dependent DNA ligase [Rothia mucilaginosa DY-18] Length = 747 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 23/45 (51%) Query: 74 QKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ YY D P +D YD + RL+ ++ + P L D P VG Sbjct: 50 RRAYYNEDAPFLSDAEYDALYRRLEIIEAEHPHLIANDSPTQEVG 94 >gi|327541957|gb|EGF28460.1| NAD-dependent DNA ligase LigA [Rhodopirellula baltica WH47] Length = 754 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V+ LV H + YY P TD YD++ L L+ ++PEL D P VG Sbjct: 64 VQQLVDEINRHNRLYYDDAAPEITDLQYDQLLAELTQLENEYPELRQPDSPTQLVG 119 >gi|330817444|ref|YP_004361149.1| DNA ligase [Burkholderia gladioli BSR3] gi|327369837|gb|AEA61193.1| DNA ligase [Burkholderia gladioli BSR3] Length = 691 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L ++ + P+L D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFRELQQIEAEHPDLITPDSPTQRVG 72 >gi|295702476|ref|YP_003595551.1| DNA ligase, NAD-dependent [Bacillus megaterium DSM 319] gi|294800135|gb|ADF37201.1| DNA ligase, NAD-dependent [Bacillus megaterium DSM 319] Length = 668 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YD++ L +++ FPEL D P +G Sbjct: 24 YYVLDQPSVPDAEYDKLMNELIEIEDSFPELKTADSPTQRIG 65 >gi|283779823|ref|YP_003370578.1| DNA ligase, NAD-dependent [Pirellula staleyi DSM 6068] gi|283438276|gb|ADB16718.1| DNA ligase, NAD-dependent [Pirellula staleyi DSM 6068] Length = 676 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 28/61 (45%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + ++ L + H YY P +D YDR+ + L ++ FPEL D P V Sbjct: 7 EILERLQALREAIRRHDYLYYVRAQPEISDLEYDRLMQDLTTIEASFPELVTPDSPTQRV 66 Query: 118 G 118 G Sbjct: 67 G 67 >gi|330837729|ref|YP_004412370.1| DNA ligase [Spirochaeta coccoides DSM 17374] gi|329749632|gb|AEC02988.1| DNA ligase [Spirochaeta coccoides DSM 17374] Length = 716 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L +I L Q YY L P +D YD + + L AL+ P++ + D P VG Sbjct: 14 LSRILLDAQHEYYVLGRPSMSDKEYDTLMDELAALEAAHPDVKEADSPTQRVG 66 >gi|303281478|ref|XP_003060031.1| predicted protein [Micromonas pusilla CCMP1545] gi|226458686|gb|EEH55983.1| predicted protein [Micromonas pusilla CCMP1545] Length = 887 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 6/81 (7%) Query: 38 KRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 +R ++W ++L E + L + + Y+ DP+ +D YD RL Sbjct: 67 RRDAQAW------ASALPASEVPAAMASLAEFISRADEAYHNDADPVASDAAYDATRLRL 120 Query: 98 DALQEQFPELFDEDHPWNTVG 118 +AL+ P + ED P VG Sbjct: 121 EALEALHPAMIREDSPIGAVG 141 >gi|313668860|ref|YP_004049144.1| DNA ligase [Neisseria lactamica ST-640] gi|313006322|emb|CBN87785.1| putative DNA ligase [Neisseria lactamica 020-06] Length = 827 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YD++ L+AL+ PEL D P VG Sbjct: 30 YYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVG 71 >gi|309378943|emb|CBX22396.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 827 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YD++ L+AL+ PEL D P VG Sbjct: 30 YYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVG 71 >gi|254514186|ref|ZP_05126247.1| DNA ligase, NAD-dependent [gamma proteobacterium NOR5-3] gi|219676429|gb|EED32794.1| DNA ligase, NAD-dependent [gamma proteobacterium NOR5-3] Length = 675 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 69 IALHHQ--KW---YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +AL Q +W YY LD+P D YD L L+ + PEL D P VG Sbjct: 12 VALREQLERWNHQYYVLDEPTVPDQDYDAALRELQKLETEHPELQDPSSPTQRVG 66 >gi|323499974|ref|ZP_08104932.1| NAD-dependent DNA ligase LigA [Vibrio sinaloensis DSM 21326] gi|323314991|gb|EGA68044.1| NAD-dependent DNA ligase LigA [Vibrio sinaloensis DSM 21326] Length = 669 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 22/47 (46%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY D P D YDR+ L L+ Q P+L D P VG Sbjct: 18 YHGVKYYVEDSPEIPDAEYDRLMRELMELESQHPDLMSLDSPSQRVG 64 >gi|320157090|ref|YP_004189469.1| DNA ligase [Vibrio vulnificus MO6-24/O] gi|319932402|gb|ADV87266.1| DNA ligase [Vibrio vulnificus MO6-24/O] Length = 669 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Query: 64 EYL--VKIALH-HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +YL +K LH H YY D+P D YDR+ L A++ + PE D P VG Sbjct: 7 QYLEELKQQLHYHAVRYYVEDNPEIPDAEYDRMMRELMAIEAEHPEWISVDSPSQRVG 64 >gi|319744895|gb|EFV97229.1| NAD-dependent DNA ligase LigA [Streptococcus agalactiae ATCC 13813] Length = 652 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 28/53 (52%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + K YY D+P +D YD++ L L+EQ PE + P + VG Sbjct: 8 LVSLLNQYAKEYYTQDNPTVSDSQYDQLYRELVELEEQHPENILPNSPTHRVG 60 >gi|150025890|ref|YP_001296716.1| DNA ligase (NAD+) [Flavobacterium psychrophilum JIP02/86] gi|166215404|sp|A6H0N9|DNLJ_FLAPJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|149772431|emb|CAL43913.1| DNA ligase (NAD+) [Flavobacterium psychrophilum JIP02/86] Length = 666 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P +D +D L +L++ PE FDE+ P VG Sbjct: 17 HNYNYYVLDNPTISDYDFDVKLTDLQSLEKNNPEYFDENSPTQRVG 62 >gi|25010923|ref|NP_735318.1| NAD-dependent DNA ligase LigA [Streptococcus agalactiae NEM316] gi|81457056|sp|Q8E5W1|DNLJ_STRA3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|23095302|emb|CAD46512.1| Unknown [Streptococcus agalactiae NEM316] Length = 652 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 28/53 (52%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + K YY D+P +D YD++ L L+EQ PE + P + VG Sbjct: 8 LVSLLNQYAKEYYTQDNPTVSDSQYDQLYRELVELEEQHPENILPNSPTHRVG 60 >gi|6179416|emb|CAB59902.1| DNA ligase [Campylobacter jejuni] Length = 245 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Query: 60 MIEVEYLVKIALHHQ--KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 M + EYL K+AL + YY D+PL +D YD + L A +EQ + +D P + Sbjct: 1 MTKKEYLEKVALAASWMRAYYEKDEPLASDEEYDALIRELRAFEEQNKDEISKDSPTQKI 60 Query: 118 G 118 Sbjct: 61 A 61 >gi|27363688|ref|NP_759216.1| NAD-dependent DNA ligase LigA [Vibrio vulnificus CMCP6] gi|81449211|sp|Q8DFK5|DNLJ_VIBVU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|27359804|gb|AAO08743.1| DNA ligase, NAD-dependent [Vibrio vulnificus CMCP6] Length = 669 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Query: 64 EYL--VKIALH-HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +YL +K LH H YY D+P D YDR+ L A++ + PE D P VG Sbjct: 7 QYLEELKQQLHYHAVRYYVEDNPEIPDAEYDRMMRELMAIEAEHPEWISVDSPSQRVG 64 >gi|56696562|ref|YP_166919.1| DNA ligase, NAD-dependent [Ruegeria pomeroyi DSS-3] gi|81349987|sp|Q5LST6|DNLJ_SILPO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|56678299|gb|AAV94965.1| DNA ligase, NAD-dependent [Ruegeria pomeroyi DSS-3] Length = 739 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ EA E+ L + Y+ LD P +D YD + +R ++ +FP L D P Sbjct: 1 MTEAEAAQELARLAGLLAQANLAYHTLDAPEISDADYDALKQRNAEIEARFPHLKRPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SEQVG 65 >gi|119386790|ref|YP_917845.1| DNA ligase, NAD-dependent [Paracoccus denitrificans PD1222] gi|166216224|sp|A1B9F5|DNLJ_PARDP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|119377385|gb|ABL72149.1| DNA ligase, NAD-dependent [Paracoccus denitrificans PD1222] Length = 765 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY+ D P +D YD RL+ ++ +FP+L P VG Sbjct: 51 YYQEDAPFISDAEYDASKRRLEEIEARFPDLAHSGSPTAQVG 92 >gi|315083671|gb|EFT55647.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL027PA2] Length = 740 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + L Q YY D P +D YDR+ L +++ PEL D P VG Sbjct: 27 LAQRILDAQDAYYARDAPTISDAEYDRLMVELKKVEDDHPELRTPDSPTQRVG 79 >gi|317455470|pdb|3PN1|A Chain A, Novel Bacterial Nad+-Dependent Dna Ligase Inhibitors With Broad Spectrum Potency And Antibacterial Efficacy In Vivo Length = 318 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 7 QLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|145627933|ref|ZP_01783734.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae 22.1-21] gi|145640788|ref|ZP_01796371.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae R3021] gi|144979708|gb|EDJ89367.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae 22.1-21] gi|145274714|gb|EDK14577.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae 22.4-21] Length = 278 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 7 QLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|37679166|ref|NP_933775.1| NAD-dependent DNA ligase LigA [Vibrio vulnificus YJ016] gi|81758078|sp|Q7MMT5|DNLJ_VIBVY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|37197908|dbj|BAC93746.1| NAD-dependent DNA ligase [Vibrio vulnificus YJ016] Length = 669 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Query: 64 EYL--VKIALH-HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +YL +K LH H YY D+P D YDR+ L A++ + PE D P VG Sbjct: 7 QYLEELKQQLHYHAVRYYVEDNPEIPDAEYDRMMRELMAIEAEHPEWISVDSPSQRVG 64 >gi|159904348|ref|YP_001551692.1| NAD-dependent DNA ligase LigA [Prochlorococcus marinus str. MIT 9211] gi|254781392|sp|A9BDC5|DNLJ_PROM4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|159889524|gb|ABX09738.1| NAD-dependent DNA ligase (contains BRCT domain type II) [Prochlorococcus marinus str. MIT 9211] Length = 697 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD PL D +YDR+ L +++ P L D P +G Sbjct: 26 YYVLDTPLMEDTVYDRLYRELLNIEKNHPSLITADSPSQRLG 67 >gi|314957538|gb|EFT01641.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL002PA1] Length = 724 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + L Q YY D P +D YDR+ L +++ PEL D P VG Sbjct: 11 LAQRILDAQDAYYARDAPTISDAEYDRLMVELKKVEDDHPELRTPDSPTQRVG 63 >gi|313681943|ref|YP_004059681.1| DNA ligase, nad-dependent [Sulfuricurvum kujiense DSM 16994] gi|313154803|gb|ADR33481.1| DNA ligase, NAD-dependent [Sulfuricurvum kujiense DSM 16994] Length = 676 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 4/56 (7%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 VE L K + H YY LDDP+ TD YD + ++ A + + P D P VG Sbjct: 10 VEQLKKYSYH----YYVLDDPITTDEEYDILYHKVVAYEHEHPSEIISDSPTQRVG 61 >gi|229542656|ref|ZP_04431716.1| DNA ligase, NAD-dependent [Bacillus coagulans 36D1] gi|229327076|gb|EEN92751.1| DNA ligase, NAD-dependent [Bacillus coagulans 36D1] Length = 668 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L ++ PEL D P VG Sbjct: 24 YYVLDRPSVPDAEYDRLLRELQEIENAHPELITPDSPTQRVG 65 >gi|84686905|ref|ZP_01014789.1| DNA ligase, NAD-dependent [Maritimibacter alkaliphilus HTCC2654] gi|84665102|gb|EAQ11582.1| DNA ligase, NAD-dependent [Rhodobacterales bacterium HTCC2654] Length = 710 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 30/68 (44%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L + A E+ L + Y+ D P +D YD R ++ +FPEL + Sbjct: 9 VEKLDEAGARAELARLADLLASANTAYHTEDAPEMSDAAYDAAKRRNAEIEARFPELKRD 68 Query: 111 DHPWNTVG 118 D P + VG Sbjct: 69 DSPTDQVG 76 >gi|313836700|gb|EFS74414.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL037PA2] gi|314929893|gb|EFS93724.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL044PA1] gi|314972321|gb|EFT16418.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL037PA3] gi|328907750|gb|EGG27514.1| NAD-dependent DNA ligase LigA [Propionibacterium sp. P08] Length = 740 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query: 45 LDKAKKVTSLSKGEAMIEVEY----LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +D + + L EA E + L + L Q YY D P +D YD++ L + Sbjct: 2 VDDSTRGGELEASEAGAEARHRWTELAQRILDAQDAYYANDAPTMSDAAYDQLMVELKKV 61 Query: 101 QEQFPELFDEDHPWNTVG 118 ++ PEL D P VG Sbjct: 62 EDDHPELRSPDSPTQRVG 79 >gi|229107967|ref|ZP_04237594.1| DNA ligase [Bacillus cereus Rock1-15] gi|228675470|gb|EEL30687.1| DNA ligase [Bacillus cereus Rock1-15] Length = 669 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|77414096|ref|ZP_00790264.1| DNA ligase, NAD-dependent [Streptococcus agalactiae 515] gi|77159848|gb|EAO70991.1| DNA ligase, NAD-dependent [Streptococcus agalactiae 515] Length = 648 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 28/53 (52%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + K YY D+P +D YD++ L L+EQ PE + P + VG Sbjct: 4 LVSLLNQYAKEYYTQDNPTVSDSQYDQLYRELVELEEQHPENILPNSPTHRVG 56 >gi|229083590|ref|ZP_04215919.1| DNA ligase [Bacillus cereus Rock3-44] gi|228699722|gb|EEL52378.1| DNA ligase [Bacillus cereus Rock3-44] Length = 669 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK +A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEKAKQRIEELRDMLNACNYQYHVLDNPSVSDAEYDRDMQELIKLEAENPEFLTEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TVRVG 65 >gi|223936891|ref|ZP_03628800.1| DNA ligase, NAD-dependent [bacterium Ellin514] gi|223894460|gb|EEF60912.1| DNA ligase, NAD-dependent [bacterium Ellin514] Length = 680 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ EA LV+ H YY P +D YDR+ L L+++FP+L D P Sbjct: 1 MTHNEAKTRHTQLVEEIRGHDNAYYVEAKPTISDQAYDRLYHELLDLEKKFPDLITSDSP 60 >gi|228919228|ref|ZP_04082598.1| DNA ligase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840335|gb|EEM85606.1| DNA ligase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 669 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|314966144|gb|EFT10243.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL082PA2] Length = 740 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + L Q YY D P +D YDR+ L +++ PEL D P VG Sbjct: 27 LAQRILDAQDAYYASDAPTISDAEYDRLMVELKKVEDDHPELRTPDSPTQRVG 79 >gi|42779416|ref|NP_976663.1| NAD-dependent DNA ligase LigA [Bacillus cereus ATCC 10987] gi|81411242|sp|Q73EM3|DNLJ_BACC1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|42735332|gb|AAS39271.1| DNA ligase, NAD-dependent [Bacillus cereus ATCC 10987] Length = 669 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD+P +D YDR + L L+ + PE ED P VG Sbjct: 24 YHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSPSVRVG 65 >gi|324324305|gb|ADY19565.1| NAD-dependent DNA ligase LigA [Bacillus thuringiensis serovar finitimus YBT-020] Length = 669 Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD+P +D YDR + L L+ + PE ED P VG Sbjct: 24 YHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSPSVRVG 65 >gi|315095035|gb|EFT67011.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL060PA1] Length = 740 Score = 35.8 bits (81), Expect = 1.7, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + L Q YY D P +D YDR+ L +++ PEL D P VG Sbjct: 27 LAQRILDAQDAYYASDAPTISDAEYDRLMVELKKVEDDHPELRTPDSPTQRVG 79 >gi|314923733|gb|EFS87564.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL001PA1] gi|315104373|gb|EFT76349.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL050PA2] gi|327328187|gb|EGE69956.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL103PA1] Length = 740 Score = 35.8 bits (81), Expect = 1.7, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + L Q YY D P +D YDR+ L +++ PEL D P VG Sbjct: 27 LAQRILDAQDAYYASDAPTISDAEYDRLMVELKKVEDDHPELRTPDSPTQRVG 79 >gi|300118925|ref|ZP_07056636.1| NAD-dependent DNA ligase LigA [Bacillus cereus SJ1] gi|298723541|gb|EFI64272.1| NAD-dependent DNA ligase LigA [Bacillus cereus SJ1] Length = 669 Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD+P +D YDR + L L+ + PE ED P VG Sbjct: 24 YHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSPSVRVG 65 >gi|282854737|ref|ZP_06264072.1| DNA ligase (NAD(+)) [Propionibacterium acnes J139] gi|282582319|gb|EFB87701.1| DNA ligase (NAD(+)) [Propionibacterium acnes J139] gi|314982008|gb|EFT26101.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL110PA3] gi|315090823|gb|EFT62799.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL110PA4] Length = 740 Score = 35.8 bits (81), Expect = 1.7, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + L Q YY D P +D YDR+ L +++ PEL D P VG Sbjct: 27 LAQRILDAQDAYYASDAPTISDAEYDRLMVELKKVEDDHPELRTPDSPTQRVG 79 >gi|229194680|ref|ZP_04321473.1| DNA ligase [Bacillus cereus m1293] gi|228588783|gb|EEK46808.1| DNA ligase [Bacillus cereus m1293] Length = 669 Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD+P +D YDR + L L+ + PE ED P VG Sbjct: 24 YHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSPSVRVG 65 >gi|206974389|ref|ZP_03235306.1| DNA ligase, NAD-dependent [Bacillus cereus H3081.97] gi|217957864|ref|YP_002336408.1| NAD-dependent DNA ligase LigA [Bacillus cereus AH187] gi|254781553|sp|B7HSW5|DNLJ_BACC7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781554|sp|B9J1L6|DNLJ_BACCQ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|206747629|gb|EDZ59019.1| DNA ligase, NAD-dependent [Bacillus cereus H3081.97] gi|217064176|gb|ACJ78426.1| DNA ligase, NAD-dependent [Bacillus cereus AH187] Length = 669 Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD+P +D YDR + L L+ + PE ED P VG Sbjct: 24 YHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSPSVRVG 65 >gi|30018549|ref|NP_830180.1| NAD-dependent DNA ligase LigA [Bacillus cereus ATCC 14579] gi|229125792|ref|ZP_04254818.1| DNA ligase [Bacillus cereus BDRD-Cer4] gi|81436035|sp|Q81IP2|DNLJ_BACCR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|29894090|gb|AAP07381.1| NAD-dependent DNA ligase [Bacillus cereus ATCC 14579] gi|228657649|gb|EEL13461.1| DNA ligase [Bacillus cereus BDRD-Cer4] Length = 669 Score = 35.8 bits (81), Expect = 1.7, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|226310273|ref|YP_002770167.1| NAD-dependent DNA ligase [Brevibacillus brevis NBRC 100599] gi|254781268|sp|C0Z4D6|DNLJ_BREBN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|226093221|dbj|BAH41663.1| NAD-dependent DNA ligase [Brevibacillus brevis NBRC 100599] Length = 671 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 29/60 (48%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A +++ L K H + Y+ D P +D YD++ L L+ FP+L D P VG Sbjct: 6 AETKIKELAKRIERHNRLYHEEDRPEISDQEYDQLMRELRELETSFPDLQSPDSPSLRVG 65 >gi|229042193|ref|ZP_04189947.1| DNA ligase [Bacillus cereus AH676] gi|228727128|gb|EEL78331.1| DNA ligase [Bacillus cereus AH676] Length = 669 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|229101110|ref|ZP_04231876.1| DNA ligase [Bacillus cereus Rock3-28] gi|228682238|gb|EEL36349.1| DNA ligase [Bacillus cereus Rock3-28] Length = 669 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|229095009|ref|ZP_04226005.1| DNA ligase [Bacillus cereus Rock3-29] gi|229113962|ref|ZP_04243388.1| DNA ligase [Bacillus cereus Rock1-3] gi|228669421|gb|EEL24837.1| DNA ligase [Bacillus cereus Rock1-3] gi|228688339|gb|EEL42221.1| DNA ligase [Bacillus cereus Rock3-29] Length = 669 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|49479078|ref|YP_034626.1| NAD-dependent DNA ligase LigA [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118476055|ref|YP_893206.1| NAD-dependent DNA ligase LigA [Bacillus thuringiensis str. Al Hakam] gi|225862344|ref|YP_002747722.1| DNA ligase, NAD-dependent [Bacillus cereus 03BB102] gi|229182688|ref|ZP_04309929.1| DNA ligase [Bacillus cereus BGSC 6E1] gi|81397398|sp|Q6HP94|DNLJ_BACHK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166215395|sp|A0R906|DNLJ_BACAH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781551|sp|C1EV74|DNLJ_BACC3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|49330634|gb|AAT61280.1| DNA ligase(NAD+) (NAD-dependent DNA ligase) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118415280|gb|ABK83699.1| NAD-dependent DNA ligase [Bacillus thuringiensis str. Al Hakam] gi|225789655|gb|ACO29872.1| DNA ligase (NAD(+)) [Bacillus cereus 03BB102] gi|228600773|gb|EEK58352.1| DNA ligase [Bacillus cereus BGSC 6E1] Length = 669 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD+P +D YDR + L L+ + PE ED P VG Sbjct: 24 YHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSPSVRVG 65 >gi|325197886|gb|ADY93342.1| DNA ligase, NAD-dependent [Neisseria meningitidis G2136] Length = 841 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YD++ L+AL+ PEL D P VG Sbjct: 44 YYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVG 85 >gi|301052018|ref|YP_003790229.1| DNA ligase [Bacillus anthracis CI] gi|300374187|gb|ADK03091.1| DNA ligase [Bacillus cereus biovar anthracis str. CI] Length = 669 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD+P +D YDR + L L+ + PE ED P VG Sbjct: 24 YHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSPSVRVG 65 >gi|218230787|ref|YP_002365135.1| NAD-dependent DNA ligase LigA [Bacillus cereus B4264] gi|254781552|sp|B7H4U8|DNLJ_BACC4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218158744|gb|ACK58736.1| DNA ligase (NAD(+)) [Bacillus cereus B4264] Length = 669 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|52144941|ref|YP_081888.1| NAD-dependent DNA ligase LigA [Bacillus cereus E33L] gi|81689708|sp|Q63GS3|DNLJ_BACCZ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|51978410|gb|AAU19960.1| DNA ligase(NAD+) (NAD-dependent DNA ligase) [Bacillus cereus E33L] Length = 669 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD+P +D YDR + L L+ + PE ED P VG Sbjct: 24 YHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSPSVRVG 65 >gi|56962859|ref|YP_174586.1| NAD-dependent DNA ligase LigA [Bacillus clausii KSM-K16] gi|81366743|sp|Q5WJ30|DNLJ_BACSK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|56909098|dbj|BAD63625.1| DNA ligase [Bacillus clausii KSM-K16] Length = 671 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L L+ +P+L ED P +G Sbjct: 24 YYVLDTPKVPDSEYDRLMNELLQLEADYPDLVTEDSPSVRIG 65 >gi|121998657|ref|YP_001003444.1| DNA ligase, NAD-dependent [Halorhodospira halophila SL1] gi|166215780|sp|A1WY80|DNLJ_HALHL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|121590062|gb|ABM62642.1| DNA ligase, NAD-dependent [Halorhodospira halophila SL1] Length = 711 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P +D YD + L L+ +P+L D P V Sbjct: 25 HDYHYYVLDRPTISDAEYDALFRELQRLEAAYPDLVSSDSPTQRVA 70 >gi|323495433|ref|ZP_08100510.1| NAD-dependent DNA ligase LigA [Vibrio brasiliensis LMG 20546] gi|323310356|gb|EGA63543.1| NAD-dependent DNA ligase LigA [Vibrio brasiliensis LMG 20546] Length = 669 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 22/47 (46%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY D P D YDR+ L ++ Q PEL D P VG Sbjct: 18 YHGVKYYVEDSPEIPDAEYDRLMRELMEIEAQHPELVSLDSPSQRVG 64 >gi|228956728|ref|ZP_04118514.1| DNA ligase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229143090|ref|ZP_04271523.1| DNA ligase [Bacillus cereus BDRD-ST24] gi|296501121|ref|YP_003662821.1| NAD-dependent DNA ligase LigA [Bacillus thuringiensis BMB171] gi|228640363|gb|EEK96760.1| DNA ligase [Bacillus cereus BDRD-ST24] gi|228802916|gb|EEM49748.1| DNA ligase [Bacillus thuringiensis serovar pakistani str. T13001] gi|296322173|gb|ADH05101.1| NAD-dependent DNA ligase LigA [Bacillus thuringiensis BMB171] Length = 669 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|15676564|ref|NP_273708.1| DNA ligase [Neisseria meningitidis MC58] gi|161869603|ref|YP_001598770.1| DNA ligase [Neisseria meningitidis 053442] gi|304388085|ref|ZP_07370214.1| NAD-dependent DNA ligase LigA [Neisseria meningitidis ATCC 13091] gi|81784869|sp|Q9K0E3|DNLJ_NEIMB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190359266|sp|A9M2U7|DNLJ_NEIM0 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|7225892|gb|AAF41084.1| DNA ligase [Neisseria meningitidis MC58] gi|161595156|gb|ABX72816.1| DNA ligase [Neisseria meningitidis 053442] gi|304337942|gb|EFM04082.1| NAD-dependent DNA ligase LigA [Neisseria meningitidis ATCC 13091] gi|316983632|gb|EFV62613.1| DNA ligase, NAD-dependent [Neisseria meningitidis H44/76] gi|325139885|gb|EGC62416.1| DNA ligase, NAD-dependent [Neisseria meningitidis CU385] gi|325200648|gb|ADY96103.1| DNA ligase, NAD-dependent [Neisseria meningitidis H44/76] Length = 841 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YD++ L+AL+ PEL D P VG Sbjct: 44 YYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVG 85 >gi|229148695|ref|ZP_04276945.1| DNA ligase [Bacillus cereus m1550] gi|228634703|gb|EEK91282.1| DNA ligase [Bacillus cereus m1550] Length = 669 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|222110866|ref|YP_002553130.1| NAD-dependent DNA ligase [Acidovorax ebreus TPSY] gi|254781316|sp|B9MIW4|DNLJ_DIAST RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|221730310|gb|ACM33130.1| DNA ligase, NAD-dependent [Acidovorax ebreus TPSY] Length = 740 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 8/67 (11%) Query: 56 KGEAMIEVEYLVKIALHHQ--KW---YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 KG A++ + +K AL Q +W YY D P D YDR + L AL+ +P+L Sbjct: 23 KGSALVAAK--IK-ALREQLNRWAHEYYVQDTPSVPDAEYDRAFQELQALEGAYPDLVTP 79 Query: 111 DHPWNTV 117 D P V Sbjct: 80 DSPTQRV 86 >gi|154498024|ref|ZP_02036402.1| hypothetical protein BACCAP_02004 [Bacteroides capillosus ATCC 29799] gi|150273014|gb|EDN00171.1| hypothetical protein BACCAP_02004 [Bacteroides capillosus ATCC 29799] Length = 664 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+P +D +D RL+ L++ P+ ED P VG Sbjct: 21 YYVLDNPTMSDYDFDHKLRRLEELEQAHPDQITEDSPTRRVG 62 >gi|289450450|ref|YP_003474988.1| DNA ligase (NAD+) [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184997|gb|ADC91422.1| DNA ligase (NAD+) [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 758 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 22/46 (47%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D P+ +D YD + RL+ L+ PE D P VG Sbjct: 106 HNNLYYVEDSPIISDYSYDAMLRRLEELETAHPEYMTTDSPTVKVG 151 >gi|218901495|ref|YP_002449329.1| DNA ligase, NAD-dependent [Bacillus cereus AH820] gi|254781549|sp|B7JM96|DNLJ_BACC0 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218535434|gb|ACK87832.1| DNA ligase, NAD-dependent [Bacillus cereus AH820] Length = 669 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|30260478|ref|NP_842855.1| NAD-dependent DNA ligase LigA [Bacillus anthracis str. Ames] gi|49183320|ref|YP_026572.1| NAD-dependent DNA ligase LigA [Bacillus anthracis str. Sterne] gi|50196911|ref|YP_052606.1| NAD-dependent DNA ligase LigA [Bacillus anthracis str. 'Ames Ancestor'] gi|65317730|ref|ZP_00390689.1| COG0272: NAD-dependent DNA ligase (contains BRCT domain type II) [Bacillus anthracis str. A2012] gi|165871348|ref|ZP_02215996.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0488] gi|167634237|ref|ZP_02392559.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0442] gi|167640082|ref|ZP_02398349.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0193] gi|170688355|ref|ZP_02879564.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0465] gi|170708762|ref|ZP_02899199.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0389] gi|177653653|ref|ZP_02935792.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0174] gi|190567340|ref|ZP_03020254.1| DNA ligase, NAD-dependent [Bacillus anthracis Tsiankovskii-I] gi|190567489|ref|ZP_03020402.1| DNA ligase, NAD-dependent [Bacillus anthracis Tsiankovskii-I] gi|196034623|ref|ZP_03102031.1| DNA ligase, NAD-dependent [Bacillus cereus W] gi|227812970|ref|YP_002812979.1| DNA ligase, NAD-dependent [Bacillus anthracis str. CDC 684] gi|228913034|ref|ZP_04076673.1| DNA ligase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228925550|ref|ZP_04088639.1| DNA ligase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228944102|ref|ZP_04106481.1| DNA ligase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229119952|ref|ZP_04249207.1| DNA ligase [Bacillus cereus 95/8201] gi|229604913|ref|YP_002864923.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0248] gi|254686689|ref|ZP_05150547.1| NAD-dependent DNA ligase LigA [Bacillus anthracis str. CNEVA-9066] gi|254739086|ref|ZP_05196788.1| NAD-dependent DNA ligase LigA [Bacillus anthracis str. Western North America USA6153] gi|254742292|ref|ZP_05199978.1| NAD-dependent DNA ligase LigA [Bacillus anthracis str. Kruger B] gi|254756068|ref|ZP_05208097.1| NAD-dependent DNA ligase LigA [Bacillus anthracis str. Vollum] gi|254761885|ref|ZP_05213734.1| NAD-dependent DNA ligase LigA [Bacillus anthracis str. Australia 94] gi|81584374|sp|Q81ZG1|DNLJ_BACAN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781547|sp|C3PBP1|DNLJ_BACAA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781548|sp|C3L543|DNLJ_BACAC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|30253846|gb|AAP24341.1| DNA ligase (NAD(+)) [Bacillus anthracis str. Ames] gi|49177247|gb|AAT52623.1| DNA ligase, NAD-dependent [Bacillus anthracis str. Sterne] gi|50082973|gb|AAT70114.1| DNA ligase, NAD-dependent [Bacillus anthracis str. 'Ames Ancestor'] gi|164712832|gb|EDR18361.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0488] gi|167511893|gb|EDR87272.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0193] gi|167530551|gb|EDR93266.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0442] gi|170126341|gb|EDS95231.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0389] gi|170667687|gb|EDT18441.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0465] gi|172081233|gb|EDT66308.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0174] gi|190561276|gb|EDV15248.1| DNA ligase, NAD-dependent [Bacillus anthracis Tsiankovskii-I] gi|190561467|gb|EDV15438.1| DNA ligase, NAD-dependent [Bacillus anthracis Tsiankovskii-I] gi|195992666|gb|EDX56626.1| DNA ligase, NAD-dependent [Bacillus cereus W] gi|227002604|gb|ACP12347.1| DNA ligase (NAD(+)) [Bacillus anthracis str. CDC 684] gi|228663418|gb|EEL19003.1| DNA ligase [Bacillus cereus 95/8201] gi|228815491|gb|EEM61733.1| DNA ligase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228834028|gb|EEM79576.1| DNA ligase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228846439|gb|EEM91452.1| DNA ligase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229269321|gb|ACQ50958.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0248] Length = 669 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|325529285|gb|EGD06234.1| NAD-dependent DNA ligase [Burkholderia sp. TJI49] Length = 691 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 19/42 (45%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L L+ PE D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFAELQQLEADHPEFVTPDSPTQRVG 72 >gi|298372045|ref|ZP_06982035.1| DNA ligase, NAD-dependent [Bacteroidetes oral taxon 274 str. F0058] gi|298274949|gb|EFI16500.1| DNA ligase, NAD-dependent [Bacteroidetes oral taxon 274 str. F0058] Length = 670 Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 28/46 (60%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY ++P +D +D ++L+++++ +PE FD++ P VG Sbjct: 20 HNHAYYVDNNPTISDFEFDMRLKQLESMEKAYPEYFDKNSPTQRVG 65 >gi|296270799|ref|YP_003653431.1| NAD-dependent DNA ligase [Thermobispora bispora DSM 43833] gi|296093586|gb|ADG89538.1| DNA ligase, NAD-dependent [Thermobispora bispora DSM 43833] Length = 732 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P +D YD + L+E++P+L D P VG Sbjct: 35 YYVLDSPTVSDAEYDAWMREIRELEERYPDLRTPDSPTQKVG 76 >gi|196040110|ref|ZP_03107412.1| DNA ligase (NAD(+)) [Bacillus cereus NVH0597-99] gi|196028965|gb|EDX67570.1| DNA ligase (NAD(+)) [Bacillus cereus NVH0597-99] Length = 669 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|261377933|ref|ZP_05982506.1| DNA ligase, NAD-dependent [Neisseria cinerea ATCC 14685] gi|269145793|gb|EEZ72211.1| DNA ligase, NAD-dependent [Neisseria cinerea ATCC 14685] Length = 831 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YD++ L+AL+ PEL D P VG Sbjct: 22 YYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVG 63 >gi|312865342|ref|ZP_07725570.1| DNA ligase (NAD+) [Streptococcus downei F0415] gi|311099453|gb|EFQ57669.1| DNA ligase (NAD+) [Streptococcus downei F0415] Length = 673 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + K YY D+P +D YD++ L L++ PEL D P + VG Sbjct: 35 RYAKEYYTQDNPSVSDAQYDKLYRELVDLEKAHPELVQADSPTHRVG 81 >gi|310826558|ref|YP_003958915.1| DNA ligase [Eubacterium limosum KIST612] gi|308738292|gb|ADO35952.1| DNA ligase [Eubacterium limosum KIST612] Length = 666 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P+ D YDR+ + L +L+ +P+ D P VG Sbjct: 26 YYDKDAPVIPDYAYDRMMQELISLETAYPQFLTSDSPSQRVG 67 >gi|296116447|ref|ZP_06835061.1| putative DNA ligase [Gluconacetobacter hansenii ATCC 23769] gi|295977040|gb|EFG83804.1| putative DNA ligase [Gluconacetobacter hansenii ATCC 23769] Length = 709 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S +A E+ L + + Y++ D P+ TD +YD + R L++ P +D P Sbjct: 24 MSASQAASELALLADVIAQLDRAYHQDDAPIVTDAVYDALRRRNSELEQAHPRERRDDSP 83 Query: 114 WNTVG 118 VG Sbjct: 84 DTRVG 88 >gi|311744048|ref|ZP_07717854.1| NAD-dependent DNA ligase LigA [Aeromicrobium marinum DSM 15272] gi|311313178|gb|EFQ83089.1| NAD-dependent DNA ligase LigA [Aeromicrobium marinum DSM 15272] Length = 782 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EA EV L++ ++ YY D L D YD +L+A++ + PEL +D P V Sbjct: 15 EARAEVTTLLERIAEAREAYYGQDASLVDDATYDGWLRQLEAVERRHPELQGQDSPTLNV 74 Query: 118 G 118 G Sbjct: 75 G 75 >gi|167619582|ref|ZP_02388213.1| DNA ligase, NAD-dependent [Burkholderia thailandensis Bt4] Length = 691 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L ++ + P+L D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFAELQQIEAEHPDLVTPDSPTQRVG 72 >gi|167581473|ref|ZP_02374347.1| DNA ligase, NAD-dependent [Burkholderia thailandensis TXDOH] Length = 691 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L ++ + P+L D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFAELQQIEAEHPDLVTPDSPTQRVG 72 >gi|145298235|ref|YP_001141076.1| NAD-dependent DNA ligase [Aeromonas salmonicida subsp. salmonicida A449] gi|166215387|sp|A4SKA6|DNLJ_AERS4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|142851007|gb|ABO89328.1| NAD-dependent DNA ligase [Aeromonas salmonicida subsp. salmonicida A449] Length = 664 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY LD+P D YDR+ L A++ + PEL P VG Sbjct: 20 HQ--YYVLDNPTVPDAEYDRLMRELIAIESEHPELKTSASPSVRVG 63 >gi|83720010|ref|YP_442546.1| DNA ligase, NAD-dependent [Burkholderia thailandensis E264] gi|257138755|ref|ZP_05587017.1| DNA ligase, NAD-dependent [Burkholderia thailandensis E264] gi|123753789|sp|Q2SX03|DNLJ_BURTA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|83653835|gb|ABC37898.1| DNA ligase, NAD-dependent [Burkholderia thailandensis E264] Length = 691 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L ++ + P+L D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFAELQQIEAEHPDLVTPDSPTQRVG 72 >gi|254724765|ref|ZP_05186548.1| NAD-dependent DNA ligase LigA [Bacillus anthracis str. A1055] Length = 669 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD+P +D YDR + L L+ + PE ED P VG Sbjct: 24 YHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSPSIRVG 65 >gi|228906068|ref|ZP_04069957.1| DNA ligase [Bacillus thuringiensis IBL 200] gi|228853477|gb|EEM98245.1| DNA ligase [Bacillus thuringiensis IBL 200] Length = 669 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRDMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|228931797|ref|ZP_04094693.1| DNA ligase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827777|gb|EEM73515.1| DNA ligase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 669 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD+P +D YDR + L L+ + PE ED P VG Sbjct: 24 YHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSPSIRVG 65 >gi|228937587|ref|ZP_04100225.1| DNA ligase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970474|ref|ZP_04131125.1| DNA ligase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977043|ref|ZP_04137446.1| DNA ligase [Bacillus thuringiensis Bt407] gi|228782660|gb|EEM30835.1| DNA ligase [Bacillus thuringiensis Bt407] gi|228789206|gb|EEM37134.1| DNA ligase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228822068|gb|EEM68058.1| DNA ligase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938080|gb|AEA13976.1| NAD-dependent DNA ligase LigA [Bacillus thuringiensis serovar chinensis CT-43] Length = 669 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRDMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|170692136|ref|ZP_02883299.1| DNA ligase, NAD-dependent [Burkholderia graminis C4D1M] gi|170142566|gb|EDT10731.1| DNA ligase, NAD-dependent [Burkholderia graminis C4D1M] Length = 693 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YD++ + L++++ + P+L D P VG Sbjct: 37 YYVLDQPDLPDAEYDKLFKELESIEAEHPDLIVPDSPTQRVG 78 >gi|218895413|ref|YP_002443824.1| DNA ligase, NAD-dependent [Bacillus cereus G9842] gi|228963387|ref|ZP_04124548.1| DNA ligase [Bacillus thuringiensis serovar sotto str. T04001] gi|254781550|sp|B7IUW5|DNLJ_BACC2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218545091|gb|ACK97485.1| DNA ligase, NAD-dependent [Bacillus cereus G9842] gi|228796281|gb|EEM43728.1| DNA ligase [Bacillus thuringiensis serovar sotto str. T04001] Length = 669 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|187924439|ref|YP_001896081.1| DNA ligase, NAD-dependent [Burkholderia phytofirmans PsJN] gi|254781278|sp|B2T5K0|DNLJ_BURPP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|187715633|gb|ACD16857.1| DNA ligase, NAD-dependent [Burkholderia phytofirmans PsJN] Length = 688 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YD++ + L++++ + P+L D P VG Sbjct: 32 YYVLDQPDLPDAEYDKLFKELESIETEHPDLIVPDSPTQRVG 73 >gi|229159446|ref|ZP_04287464.1| DNA ligase [Bacillus cereus R309803] gi|228624017|gb|EEK80825.1| DNA ligase [Bacillus cereus R309803] Length = 669 Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|238854176|ref|ZP_04644523.1| DNA ligase, NAD-dependent [Lactobacillus gasseri 202-4] gi|238833252|gb|EEQ25542.1| DNA ligase, NAD-dependent [Lactobacillus gasseri 202-4] Length = 668 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P+ D +YD+ + L L++QFP+L D VG Sbjct: 27 YYAKDAPVVEDAVYDKAYQELVELEKQFPDLVTSDSITQRVG 68 >gi|229089420|ref|ZP_04220691.1| DNA ligase [Bacillus cereus Rock3-42] gi|228693897|gb|EEL47589.1| DNA ligase [Bacillus cereus Rock3-42] Length = 669 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|229154059|ref|ZP_04282184.1| DNA ligase [Bacillus cereus ATCC 4342] gi|228629339|gb|EEK86041.1| DNA ligase [Bacillus cereus ATCC 4342] Length = 669 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|294776463|ref|ZP_06741938.1| DNA ligase (NAD(+)) [Bacteroides vulgatus PC510] gi|294449660|gb|EFG18185.1| DNA ligase (NAD(+)) [Bacteroides vulgatus PC510] Length = 665 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%) Query: 60 MIEVEYL--VKIALHHQKW-YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 M E+E + ++ LH + YY L+ P TD +D++ L L+E+ PE DE+ P Sbjct: 1 MTEIERIDQLREELHRHNYNYYVLNAPEITDQEFDKLMRELQDLEEKHPEHRDENSPSMR 60 Query: 117 VG 118 VG Sbjct: 61 VG 62 >gi|150005810|ref|YP_001300554.1| DNA ligase [Bacteroides vulgatus ATCC 8482] gi|237725408|ref|ZP_04555889.1| DNA ligase [Bacteroides sp. D4] gi|319640984|ref|ZP_07995691.1| DNA ligase [Bacteroides sp. 3_1_40A] gi|166215396|sp|A6L5G8|DNLJ_BACV8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|149934234|gb|ABR40932.1| DNA ligase [Bacteroides vulgatus ATCC 8482] gi|229436095|gb|EEO46172.1| DNA ligase [Bacteroides dorei 5_1_36/D4] gi|317387362|gb|EFV68234.1| DNA ligase [Bacteroides sp. 3_1_40A] Length = 665 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%) Query: 60 MIEVEYL--VKIALHHQKW-YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 M E+E + ++ LH + YY L+ P TD +D++ L L+E+ PE DE+ P Sbjct: 1 MTEIERIDQLREELHRHNYNYYVLNAPEITDQEFDKLMRELQDLEEKHPEHRDENSPSMR 60 Query: 117 VG 118 VG Sbjct: 61 VG 62 >gi|90962320|ref|YP_536236.1| NAD-dependent DNA ligase [Lactobacillus salivarius UCC118] gi|123391334|sp|Q1WSH6|DNLJ_LACS1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|90821514|gb|ABE00153.1| NAD-dependent DNA ligase [Lactobacillus salivarius UCC118] Length = 672 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D +YD+ +RL L++ P+L D P VG Sbjct: 24 YYVLDTPSVEDSVYDKHYQRLLELEQANPDLVTADSPSQRVG 65 >gi|28897574|ref|NP_797179.1| NAD-dependent DNA ligase LigA [Vibrio parahaemolyticus RIMD 2210633] gi|260878266|ref|ZP_05890621.1| DNA ligase (NAD+) [Vibrio parahaemolyticus AN-5034] gi|260895418|ref|ZP_05903914.1| DNA ligase (NAD+) [Vibrio parahaemolyticus Peru-466] gi|260903353|ref|ZP_05911748.1| DNA ligase (NAD+) [Vibrio parahaemolyticus AQ4037] gi|81728289|sp|Q87RJ4|DNLJ_VIBPA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|28805786|dbj|BAC59063.1| DNA ligase [Vibrio parahaemolyticus RIMD 2210633] gi|308088617|gb|EFO38312.1| DNA ligase (NAD+) [Vibrio parahaemolyticus Peru-466] gi|308090169|gb|EFO39864.1| DNA ligase (NAD+) [Vibrio parahaemolyticus AN-5034] gi|308107994|gb|EFO45534.1| DNA ligase (NAD+) [Vibrio parahaemolyticus AQ4037] Length = 670 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 67 VKIALH-HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +K +LH H YY D+P D YDR+ L ++ Q P+L D P VG Sbjct: 12 LKESLHYHAVRYYVEDNPEIPDAEYDRLMRELLEIEAQHPDLVTVDSPSQRVG 64 >gi|300214970|gb|ADJ79386.1| DNA ligase(Polydeoxyribonucleotide synthase [NAD+]) [Lactobacillus salivarius CECT 5713] Length = 672 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D +YD+ +RL L++ P+L D P VG Sbjct: 24 YYVLDTPSVEDSVYDKHYQRLLELEQANPDLVTADSPSQRVG 65 >gi|282851211|ref|ZP_06260576.1| DNA ligase (NAD(+)) [Lactobacillus gasseri 224-1] gi|282557179|gb|EFB62776.1| DNA ligase (NAD(+)) [Lactobacillus gasseri 224-1] Length = 668 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P+ D +YD+ + L L++QFP+L D VG Sbjct: 27 YYAKDAPVVEDAVYDKAYQELVELEKQFPDLVTSDSITQRVG 68 >gi|75759916|ref|ZP_00739987.1| NAD-dependent DNA ligase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228899023|ref|ZP_04063296.1| DNA ligase [Bacillus thuringiensis IBL 4222] gi|74492583|gb|EAO55728.1| NAD-dependent DNA ligase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228860598|gb|EEN04985.1| DNA ligase [Bacillus thuringiensis IBL 4222] Length = 669 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIELEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|328473436|gb|EGF44284.1| NAD-dependent DNA ligase LigA [Vibrio parahaemolyticus 10329] Length = 670 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 67 VKIALH-HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +K +LH H YY D+P D YDR+ L ++ Q P+L D P VG Sbjct: 12 LKESLHYHAVRYYVEDNPEIPDAEYDRLMRELLEIEAQHPDLVTVDSPSQRVG 64 >gi|295676829|ref|YP_003605353.1| DNA ligase, NAD-dependent [Burkholderia sp. CCGE1002] gi|295436672|gb|ADG15842.1| DNA ligase, NAD-dependent [Burkholderia sp. CCGE1002] Length = 687 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 67 VKIALHHQKW-YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L H + YY LD P D YD++ + L+ ++ + P+L D P VG Sbjct: 21 LRAELEHANYAYYVLDQPDLPDAEYDKLFKELERIEAEHPDLIVPDSPTQRVG 73 >gi|229028145|ref|ZP_04184287.1| DNA ligase [Bacillus cereus AH1271] gi|228733163|gb|EEL84003.1| DNA ligase [Bacillus cereus AH1271] Length = 669 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKQRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|229171138|ref|ZP_04298732.1| DNA ligase [Bacillus cereus MM3] gi|228612316|gb|EEK69544.1| DNA ligase [Bacillus cereus MM3] Length = 669 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKQRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|153838362|ref|ZP_01991029.1| DNA ligase, NAD-dependent [Vibrio parahaemolyticus AQ3810] gi|149748221|gb|EDM59080.1| DNA ligase, NAD-dependent [Vibrio parahaemolyticus AQ3810] Length = 670 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 67 VKIALH-HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +K +LH H YY D+P D YDR+ L ++ Q P+L D P VG Sbjct: 12 LKESLHYHAVRYYVEDNPEIPDAEYDRLMRELLEIEAQHPDLVTVDSPSQRVG 64 >gi|116630136|ref|YP_815308.1| NAD-dependent DNA ligase [Lactobacillus gasseri ATCC 33323] gi|122272927|sp|Q041K2|DNLJ_LACGA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116095718|gb|ABJ60870.1| NAD-dependent DNA ligase [Lactobacillus gasseri ATCC 33323] Length = 668 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P+ D +YD+ + L L++QFP+L D VG Sbjct: 27 YYAKDAPVVEDAVYDKAYQELVELEKQFPDLVTSDSITQRVG 68 >gi|311067136|ref|YP_003972059.1| NAD-dependent DNA ligase LigA [Bacillus atrophaeus 1942] gi|310867653|gb|ADP31128.1| NAD-dependent DNA ligase LigA [Bacillus atrophaeus 1942] Length = 668 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+P D YD++ + L L+E+ P+L D P VG Sbjct: 24 YYTLDEPSVPDSEYDKLMQELLDLEEEHPDLRTPDSPTQRVG 65 >gi|283832193|ref|ZP_06351934.1| DNA ligase, NAD-dependent [Citrobacter youngae ATCC 29220] gi|291071830|gb|EFE09939.1| DNA ligase, NAD-dependent [Citrobacter youngae ATCC 29220] Length = 671 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YD + +L L+ PEL D P VG Sbjct: 17 HHEYLYHVMDAPEIPDVEYDLLMHKLQWLEALHPELITPDSPTQRVG 63 >gi|254882009|ref|ZP_05254719.1| polydeoxyribonucleotide synthase [Bacteroides sp. 4_3_47FAA] gi|254834802|gb|EET15111.1| polydeoxyribonucleotide synthase [Bacteroides sp. 4_3_47FAA] Length = 665 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%) Query: 60 MIEVEYLVKI--ALHHQKW-YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 M E+E + ++ LH + YY L+ P TD +D++ L L+E+ PE DE+ P Sbjct: 1 MTEIERIDQLREELHRHNYNYYVLNAPEITDQEFDKLMRELQDLEEKHPEHRDENSPSMR 60 Query: 117 VG 118 VG Sbjct: 61 VG 62 >gi|227892258|ref|ZP_04010063.1| NAD-dependent DNA ligase [Lactobacillus salivarius ATCC 11741] gi|227865899|gb|EEJ73320.1| NAD-dependent DNA ligase [Lactobacillus salivarius ATCC 11741] Length = 672 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D +YD+ +RL L++ P+L D P VG Sbjct: 24 YYVLDTPSVEDSVYDKHYQRLLELEQANPDLVTADSPSQRVG 65 >gi|160945211|ref|ZP_02092437.1| hypothetical protein FAEPRAM212_02730 [Faecalibacterium prausnitzii M21/2] gi|158442942|gb|EDP19947.1| hypothetical protein FAEPRAM212_02730 [Faecalibacterium prausnitzii M21/2] Length = 671 Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 28/61 (45%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A V+ L I + + YY D P D YD ++ L L+ QFP+L P V Sbjct: 8 QAKKRVKELRAIIEKNNRLYYDQDAPELEDFEYDALTRELKELEAQFPQLVTAASPTQKV 67 Query: 118 G 118 G Sbjct: 68 G 68 >gi|241764431|ref|ZP_04762455.1| DNA ligase, NAD-dependent [Acidovorax delafieldii 2AN] gi|241366173|gb|EER60750.1| DNA ligase, NAD-dependent [Acidovorax delafieldii 2AN] Length = 697 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 2/45 (4%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 HQ YY +D+P D YD V L AL+ P+L D P V Sbjct: 28 HQ--YYVMDEPTVPDAEYDSVFRELQALETAHPDLITPDSPTQRV 70 >gi|289649545|ref|ZP_06480888.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. aesculi str. 2250] Length = 787 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 18 HNYRYHVLDEPSIPDVEYDRLFHELKALEVENPHLVTPDSPTQRVG 63 >gi|329667842|gb|AEB93790.1| NAD-dependent DNA ligase [Lactobacillus johnsonii DPC 6026] Length = 668 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%) Query: 75 KW---YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 KW YY D P+ D +YD+ + L L+EQFP+L + VG Sbjct: 22 KWADDYYAKDAPVVEDAVYDKTYQELVELEEQFPDLVTANSITQRVG 68 >gi|256372325|ref|YP_003110149.1| DNA ligase, NAD-dependent [Acidimicrobium ferrooxidans DSM 10331] gi|256008909|gb|ACU54476.1| DNA ligase, NAD-dependent [Acidimicrobium ferrooxidans DSM 10331] Length = 664 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY DDP+ +D +D + L AL+ PEL D P VG Sbjct: 23 YYVADDPIMSDDEFDGLVLELRALEAAHPELRSPDSPTERVG 64 >gi|229015686|ref|ZP_04172669.1| DNA ligase [Bacillus cereus AH1273] gi|229021878|ref|ZP_04178448.1| DNA ligase [Bacillus cereus AH1272] gi|228739424|gb|EEL89850.1| DNA ligase [Bacillus cereus AH1272] gi|228745603|gb|EEL95622.1| DNA ligase [Bacillus cereus AH1273] Length = 669 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD+P +D YDR + L L+ + PE ED P VG Sbjct: 24 YHVLDNPSVSDAEYDRNMQELIKLEAENPEFMGEDSPSIRVG 65 >gi|253701546|ref|YP_003022735.1| DNA ligase, NAD-dependent [Geobacter sp. M21] gi|251776396|gb|ACT18977.1| DNA ligase, NAD-dependent [Geobacter sp. M21] Length = 668 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 28/65 (43%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A +++L H + YY D P TD YD + L L+ P+L D P Sbjct: 1 MDKTAAAQRIKWLSSEIERHNRLYYEQDMPEITDAEYDALFRELKELEASHPDLALPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TGRVG 65 >gi|325267489|ref|ZP_08134142.1| NAD-dependent DNA ligase LigA [Kingella denitrificans ATCC 33394] gi|324981014|gb|EGC16673.1| NAD-dependent DNA ligase LigA [Kingella denitrificans ATCC 33394] Length = 804 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV+ + YY LD P D YDR+ L+ L+ ++P+ + P VG Sbjct: 32 IRTLVQTLNRYAHEYYTLDAPSVPDAEYDRLYRELETLEAEYPQFRLPESPTQRVG 87 >gi|265753576|ref|ZP_06088931.1| DNA ligase, NAD-dependent [Bacteroides sp. 3_1_33FAA] gi|263235290|gb|EEZ20814.1| DNA ligase, NAD-dependent [Bacteroides sp. 3_1_33FAA] Length = 665 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%) Query: 60 MIEVEYLVKI--ALHHQKW-YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 M E+E + ++ LH + YY L+ P TD +D++ L L+E+ PE DE+ P Sbjct: 1 MTEIERIDQLREELHRHNYNYYVLNAPEITDQEFDKLMRELQDLEEKHPEHRDENSPSMR 60 Query: 117 VG 118 VG Sbjct: 61 VG 62 >gi|228983547|ref|ZP_04143752.1| DNA ligase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228776143|gb|EEM24504.1| DNA ligase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 669 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|257439787|ref|ZP_05615542.1| DNA ligase, NAD-dependent [Faecalibacterium prausnitzii A2-165] gi|257197807|gb|EEU96091.1| DNA ligase, NAD-dependent [Faecalibacterium prausnitzii A2-165] Length = 209 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A E L I + + YY D P D YD ++ L AL+ +FP+L + P V Sbjct: 5 QARKRAEELRVIIERNNRLYYDQDAPELEDFEYDALTRELKALEAEFPQLVTANSPTQKV 64 Query: 118 G 118 G Sbjct: 65 G 65 >gi|237709923|ref|ZP_04540404.1| DNA ligase [Bacteroides sp. 9_1_42FAA] gi|229456016|gb|EEO61737.1| DNA ligase [Bacteroides sp. 9_1_42FAA] Length = 665 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%) Query: 60 MIEVEYLVKI--ALHHQKW-YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 M E+E + ++ LH + YY L+ P TD +D++ L L+E+ PE DE+ P Sbjct: 1 MTEIERIDQLREELHRHNYNYYVLNAPEITDQEFDKLMRELQDLEEKHPEHRDENSPSMR 60 Query: 117 VG 118 VG Sbjct: 61 VG 62 >gi|295394422|ref|ZP_06804646.1| NAD-dependent DNA ligase LigA [Brevibacterium mcbrellneri ATCC 49030] gi|294972774|gb|EFG48625.1| NAD-dependent DNA ligase LigA [Brevibacterium mcbrellneri ATCC 49030] Length = 740 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H++ YY D P +D +D + L+ L+ +PEL +D P VG Sbjct: 36 HREAYYVHDAPKISDKEFDELVHALEDLESAYPELARDDSPTQKVG 81 >gi|255327262|ref|ZP_05368336.1| DNA ligase, NAD-dependent [Rothia mucilaginosa ATCC 25296] gi|255295542|gb|EET74885.1| DNA ligase, NAD-dependent [Rothia mucilaginosa ATCC 25296] Length = 735 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 24/45 (53%) Query: 74 QKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ YY D P +D YD++ RL+ ++ + P + D P VG Sbjct: 38 RRAYYNEDAPFLSDAEYDKLYRRLEIIEAEHPLIIANDSPTQEVG 82 >gi|212693183|ref|ZP_03301311.1| hypothetical protein BACDOR_02690 [Bacteroides dorei DSM 17855] gi|212664288|gb|EEB24860.1| hypothetical protein BACDOR_02690 [Bacteroides dorei DSM 17855] Length = 665 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%) Query: 60 MIEVEYLVKI--ALHHQKW-YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 M E+E + ++ LH + YY L+ P TD +D++ L L+E+ PE DE+ P Sbjct: 1 MTEIERIDQLREELHRHNYNYYVLNAPEITDQEFDKLMRELQDLEEKHPEHRDENSPSMR 60 Query: 117 VG 118 VG Sbjct: 61 VG 62 >gi|42561289|ref|NP_975740.1| DNA ligase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81400468|sp|Q6MSK8|DNLJ_MYCMS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|42492787|emb|CAE77382.1| DNA ligase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320499|gb|ADK69142.1| DNA ligase (NAD(+)) [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 668 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK +A++ + L + K YY D+P D YD + L +L+ +PEL D P Sbjct: 1 MSKDKALLRINQLKEQLNLWSKQYYVDDNPSVDDTEYDLALKELISLETLYPELITSDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQKVG 65 >gi|12045108|ref|NP_072919.1| DNA ligase, NAD-dependent [Mycoplasma genitalium G37] gi|1352291|sp|P47496|DNLJ_MYCGE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|3844852|gb|AAC71474.1| DNA ligase, NAD-dependent [Mycoplasma genitalium G37] gi|166078824|gb|ABY79442.1| DNA ligase, NAD-dependent [synthetic Mycoplasma genitalium JCVI-1.0] Length = 659 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 31/58 (53%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++++ LV + ++ YY L +PL D YD + + L L++ P+L D P VG Sbjct: 6 LKIQQLVNLIKNYDYHYYVLSEPLIDDFEYDMLYKSLQQLEKDHPDLIQIDSPTQRVG 63 >gi|210621776|ref|ZP_03292805.1| hypothetical protein CLOHIR_00750 [Clostridium hiranonis DSM 13275] gi|210154540|gb|EEA85546.1| hypothetical protein CLOHIR_00750 [Clostridium hiranonis DSM 13275] Length = 678 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K + ++++ L+ +H YY D P +D YD + + L L+ + PE D P Sbjct: 1 MGKEDIKLQIDNLIDKINYHSDKYYNQDTPEISDFEYDMLMKELIKLEAENPEFKRVDSP 60 Query: 114 WNTVG 118 N VG Sbjct: 61 SNRVG 65 >gi|209695779|ref|YP_002263709.1| NAD-dependent DNA ligase LigA [Aliivibrio salmonicida LFI1238] gi|254781250|sp|B6EJQ6|DNLJ_ALISL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|208009732|emb|CAQ80037.1| NAD-dependent DNA ligase [Aliivibrio salmonicida LFI1238] Length = 669 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY D P D YDR+ ++L ++++ PE D P VG Sbjct: 16 YHAYRYYVEDSPELPDAEYDRMMQQLLLIEKEHPEFMTVDSPSQRVG 62 >gi|289422752|ref|ZP_06424592.1| DNA ligase (NAD(+)) [Peptostreptococcus anaerobius 653-L] gi|289156931|gb|EFD05556.1| DNA ligase (NAD(+)) [Peptostreptococcus anaerobius 653-L] Length = 700 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY D+P +D YDR+ L L++++P+L D P VG Sbjct: 41 YHSDSYYNKDNPEISDYQYDRMMRCLIGLEDKYPDLKAPDSPSVRVG 87 >gi|257869253|ref|ZP_05648906.1| NAD-dependent DNA ligase [Enterococcus gallinarum EG2] gi|257803417|gb|EEV32239.1| NAD-dependent DNA ligase [Enterococcus gallinarum EG2] Length = 676 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YDR+ + L L+ +P+L ED P VG Sbjct: 26 YYVKDQPSVEDYVYDRLYKELVQLETDYPQLVTEDSPTQRVG 67 >gi|229188563|ref|ZP_04315602.1| DNA ligase [Bacillus cereus ATCC 10876] gi|228594752|gb|EEK52532.1| DNA ligase [Bacillus cereus ATCC 10876] Length = 669 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD+P +D YDR + L L+ + PE ED P VG Sbjct: 24 YHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSPSVRVG 65 >gi|206967609|ref|ZP_03228565.1| DNA ligase, NAD-dependent [Bacillus cereus AH1134] gi|228950848|ref|ZP_04112971.1| DNA ligase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229068048|ref|ZP_04201356.1| DNA ligase [Bacillus cereus F65185] gi|229077651|ref|ZP_04210281.1| DNA ligase [Bacillus cereus Rock4-2] gi|229176884|ref|ZP_04304280.1| DNA ligase [Bacillus cereus 172560W] gi|206736529|gb|EDZ53676.1| DNA ligase, NAD-dependent [Bacillus cereus AH1134] gi|228606557|gb|EEK63982.1| DNA ligase [Bacillus cereus 172560W] gi|228705592|gb|EEL57948.1| DNA ligase [Bacillus cereus Rock4-2] gi|228715056|gb|EEL66923.1| DNA ligase [Bacillus cereus F65185] gi|228808777|gb|EEM55273.1| DNA ligase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 669 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD+P +D YDR + L L+ + PE ED P VG Sbjct: 24 YHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSPSVRVG 65 >gi|319789848|ref|YP_004151481.1| DNA ligase, NAD-dependent [Thermovibrio ammonificans HB-1] gi|317114350|gb|ADU96840.1| DNA ligase, NAD-dependent [Thermovibrio ammonificans HB-1] Length = 723 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 33/64 (51%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 LS EA E L ++ +H YY +P+ +D YD++ L+AL++ PE+ D P Sbjct: 32 LSTEEARELAEKLRRVIRYHDYKYYVQANPVISDYQYDKLFHALEALEKAHPEVVTPDSP 91 Query: 114 WNTV 117 + Sbjct: 92 TQRI 95 >gi|301299742|ref|ZP_07205992.1| DNA ligase (NAD(+)) [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852673|gb|EFK80307.1| DNA ligase (NAD(+)) [Lactobacillus salivarius ACS-116-V-Col5a] Length = 672 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D +YD+ +RL L++ P+L D P VG Sbjct: 24 YYVLDTPSVEDSVYDKHYQRLLELEQANPDLVTADSPSQRVG 65 >gi|255660255|ref|ZP_05405664.1| DNA ligase, NAD-dependent [Mycoplasma genitalium G37] Length = 658 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 31/58 (53%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++++ LV + ++ YY L +PL D YD + + L L++ P+L D P VG Sbjct: 5 LKIQQLVNLIKNYDYHYYVLSEPLIDDFEYDMLYKSLQQLEKDHPDLIQIDSPTQRVG 62 >gi|110679832|ref|YP_682839.1| DNA ligase, NAD-dependent [Roseobacter denitrificans OCh 114] gi|123172419|sp|Q166E0|DNLJ_ROSDO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|109455948|gb|ABG32153.1| DNA ligase, NAD-dependent [Roseobacter denitrificans OCh 114] Length = 705 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 SL++ A E+ L + Y+ D P+ +D +D R A++E+FP L D Sbjct: 8 SLTEKAAKKELSKLADLLDQANTAYHANDAPIISDADFDAYKRRNLAIEERFPHLKRADS 67 Query: 113 PWNTVG 118 P + VG Sbjct: 68 PTDRVG 73 >gi|196045221|ref|ZP_03112453.1| DNA ligase, NAD-dependent [Bacillus cereus 03BB108] gi|196023805|gb|EDX62480.1| DNA ligase, NAD-dependent [Bacillus cereus 03BB108] Length = 669 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD+P +D YDR + L L+ + PE ED P VG Sbjct: 24 YHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSPSVRVG 65 >gi|325479535|gb|EGC82631.1| DNA ligase (NAD+) [Anaerococcus prevotii ACS-065-V-Col13] Length = 669 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+PL +DG YD + +RL L+++ +E+ P VG Sbjct: 21 YYTLDEPLVSDGEYDEIYDRLVKLEDK-SGYINENSPTQKVG 61 >gi|317495223|ref|ZP_07953593.1| DNA ligase [Gemella moribillum M424] gi|316914645|gb|EFV36121.1| DNA ligase [Gemella moribillum M424] Length = 663 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 32/57 (56%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ LV + + YY D+P +D YD + ++L+ L++++PE ++ P VG Sbjct: 7 EIFKLVALLNKYSYDYYVEDNPQISDTEYDTLYKQLEKLEQEYPEFILDNSPTQRVG 63 >gi|149195296|ref|ZP_01872384.1| NAD-dependent DNA ligase LigA [Caminibacter mediatlanticus TB-2] gi|149134560|gb|EDM23048.1| NAD-dependent DNA ligase LigA [Caminibacter mediatlanticus TB-2] Length = 682 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%) Query: 74 QKW---YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +KW YY LD+PL TD YD++ + ++ ++ P+ D+ P +G Sbjct: 16 KKWAYYYYVLDNPLVTDEEYDKLYKEVEEYEKNHPDEVDKTSPTQRIG 63 >gi|326776439|ref|ZP_08235704.1| DNA ligase, NAD-dependent [Streptomyces cf. griseus XylebKG-1] gi|326656772|gb|EGE41618.1| DNA ligase, NAD-dependent [Streptomyces cf. griseus XylebKG-1] Length = 743 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H+ YY D P+ +D +DR L+AL+E+ P L D P V Sbjct: 31 HRFRYYVKDQPVVSDADFDRQLRSLEALEEEHPSLRTPDSPTQKVA 76 >gi|225025741|ref|ZP_03714933.1| hypothetical protein EIKCOROL_02645 [Eikenella corrodens ATCC 23834] gi|224941522|gb|EEG22731.1| hypothetical protein EIKCOROL_02645 [Eikenella corrodens ATCC 23834] Length = 778 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV+ + YY LD P D YDR+ L+AL+ + P+ + P VG Sbjct: 8 IRTLVQTLNRYAHEYYTLDAPSVPDAEYDRLYRELEALEAEHPQFRLPESPTQRVG 63 >gi|182435814|ref|YP_001823533.1| NAD-dependent DNA ligase LigA [Streptomyces griseus subsp. griseus NBRC 13350] gi|254778153|sp|B1VZW1|DNLJ2_STRGG RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 2 gi|178464330|dbj|BAG18850.1| putative DNA ligase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 743 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H+ YY D P+ +D +DR L+AL+E+ P L D P V Sbjct: 31 HRFRYYVKDQPVVSDADFDRQLRSLEALEEEHPSLRTPDSPTQKVA 76 >gi|229548668|ref|ZP_04437393.1| DNA ligase, NAD-dependent [Enterococcus faecalis ATCC 29200] gi|257420983|ref|ZP_05597973.1| DNA ligase [Enterococcus faecalis X98] gi|312953107|ref|ZP_07771956.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0102] gi|229306184|gb|EEN72180.1| DNA ligase, NAD-dependent [Enterococcus faecalis ATCC 29200] gi|257162807|gb|EEU92767.1| DNA ligase [Enterococcus faecalis X98] gi|310628941|gb|EFQ12224.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0102] gi|315153982|gb|EFT97998.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0031] gi|315156746|gb|EFU00763.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0043] Length = 676 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YDR+ + L ++ +FP+L D P VG Sbjct: 29 YYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVG 70 >gi|146301217|ref|YP_001195808.1| DNA ligase, NAD-dependent [Flavobacterium johnsoniae UW101] gi|190359257|sp|A5FE87|DNLJ_FLAJO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|146155635|gb|ABQ06489.1| DNA ligase, NAD-dependent [Flavobacterium johnsoniae UW101] Length = 668 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+ +D +D + L L+ + PE FDED P VG Sbjct: 16 QHNYNYYVLDNATISDYDFDIKLKELQDLENKHPEFFDEDSPTQRVG 62 >gi|82523924|emb|CAI78646.1| NAD-dependent DNA ligase [uncultured delta proteobacterium] Length = 670 Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L +I +H K YY+ D P +D YD + L L+ QFP+ P VG Sbjct: 14 LRQIIEYHNKRYYQQDAPEISDAEYDLLMRELHNLEAQFPDDELASSPTQRVG 66 >gi|297202535|ref|ZP_06919932.1| DNA ligase, NAD-dependent [Streptomyces sviceus ATCC 29083] gi|197709937|gb|EDY53971.1| DNA ligase, NAD-dependent [Streptomyces sviceus ATCC 29083] Length = 730 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 16/45 (35%), Positives = 27/45 (60%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 H+ YY D P+ +D +D++ L+AL++++PEL D P V Sbjct: 29 HRFRYYVNDAPVVSDADFDKLLRSLEALEDEYPELRTPDSPTQKV 73 >gi|163856016|ref|YP_001630314.1| DNA ligase [Bordetella petrii DSM 12804] gi|254781264|sp|A9II69|DNLJ_BORPD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|163259744|emb|CAP42045.1| DNA ligase [Bordetella petrii] Length = 697 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 G+A V L H YY DDP +D YD + L L+ PEL + P Sbjct: 6 GQAAQRVAALRNEIEQHNVRYYVHDDPSVSDAEYDALMRELIQLETDHPELVTPESPTQR 65 Query: 117 VG 118 VG Sbjct: 66 VG 67 >gi|33864448|ref|NP_896008.1| NAD-dependent DNA ligase LigA [Prochlorococcus marinus str. MIT 9313] gi|81576658|sp|Q7V3Z9|DNLJ_PROMM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|33641228|emb|CAE22358.1| NAD-dependent DNA ligase [Prochlorococcus marinus str. MIT 9313] Length = 696 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 TS++ + E+ L+ A H YY LD P D +YDR+ L L+ + L D Sbjct: 4 TSITPPKRAAELRQLLNQAAHS---YYVLDTPTMEDAVYDRLYRELLNLEAKDSSLLTPD 60 Query: 112 HPWNTVG 118 P +G Sbjct: 61 SPTQRIG 67 >gi|152974127|ref|YP_001373644.1| NAD-dependent DNA ligase LigA [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|190359228|sp|A7GKJ1|DNLJ_BACCN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|152022879|gb|ABS20649.1| DNA ligase, NAD-dependent [Bacillus cytotoxicus NVH 391-98] Length = 669 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEAVQQRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLETENPEFITEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|167586849|ref|ZP_02379237.1| DNA ligase, NAD-dependent [Burkholderia ubonensis Bu] Length = 691 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L ++ PEL D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFLELQQIEADHPELVTPDSPTQRVG 72 >gi|205355436|ref|ZP_03222207.1| DNA ligase [Campylobacter jejuni subsp. jejuni CG8421] gi|205346670|gb|EDZ33302.1| DNA ligase [Campylobacter jejuni subsp. jejuni CG8421] Length = 647 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 64 EYLVKIALHH--QKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL K+AL + + YY D+PL +D YD + L A +EQ + +D P + Sbjct: 5 EYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELRAFEEQNKDEISKDSPTQKIA 61 >gi|157414868|ref|YP_001482124.1| NAD-dependent DNA ligase LigA [Campylobacter jejuni subsp. jejuni 81116] gi|190359240|sp|A8FL10|DNLJ_CAMJ8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157385832|gb|ABV52147.1| DNA ligase [Campylobacter jejuni subsp. jejuni 81116] gi|315931784|gb|EFV10739.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni 327] Length = 647 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 64 EYLVKIALHH--QKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL K+AL + + YY D+PL +D YD + L A +EQ + +D P + Sbjct: 5 EYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELRAFEEQNKDEISKDSPTQKIA 61 >gi|229587518|ref|YP_002860556.1| hypothetical protein CLJ_0249 [Clostridium botulinum Ba4 str. 657] gi|229260200|gb|ACQ51237.1| hypothetical protein CLJ_0249 [Clostridium botulinum Ba4 str. 657] Length = 125 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 25/41 (60%) Query: 70 ALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 L H YYRL+D L D YD+ + L+ LQ+ +P+L ++ Sbjct: 44 VLVHSCTYYRLNDSLIDDYTYDKWARELENLQDMYPDLLED 84 >gi|121611375|ref|YP_999182.1| DNA ligase [Verminephrobacter eiseniae EF01-2] gi|166216275|sp|A1WRA7|DNLJ_VEREI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|121556015|gb|ABM60164.1| DNA ligase, NAD-dependent [Verminephrobacter eiseniae EF01-2] Length = 693 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 28/69 (40%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 LD + +A + L + +H Y+ LD P D YDR + L AL+ Sbjct: 5 LDHCPDPAQMDPAQADARIRALREQLVHWAHQYHVLDAPSVPDAEYDRAFQALQALEAAH 64 Query: 105 PELFDEDHP 113 P L D P Sbjct: 65 PALITPDSP 73 >gi|269960659|ref|ZP_06175031.1| DNA ligase [Vibrio harveyi 1DA3] gi|269834736|gb|EEZ88823.1| DNA ligase [Vibrio harveyi 1DA3] Length = 670 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 67 VKIALH-HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +K +LH H YY D+P D YDR+ L ++ + PEL D P VG Sbjct: 12 LKESLHYHAVRYYVEDNPEIPDAEYDRMMRELLDIEAEHPELVTVDSPSQRVG 64 >gi|260889570|ref|ZP_05900833.1| DNA ligase, NAD-dependent [Leptotrichia hofstadii F0254] gi|260860981|gb|EEX75481.1| DNA ligase, NAD-dependent [Leptotrichia hofstadii F0254] Length = 702 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 5/52 (9%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF-----DEDHPWNTVG 118 +H YY D PL +D YD + L L++++PEL E P +G Sbjct: 39 YHNNLYYNEDKPLISDMEYDALMRELKQLEQKYPELLKNEENGESSPTEKIG 90 >gi|116074145|ref|ZP_01471407.1| DNA ligase [Synechococcus sp. RS9916] gi|116069450|gb|EAU75202.1| DNA ligase [Synechococcus sp. RS9916] Length = 691 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L+ A H YY LD P+ D +YDR+ L L+ P L D P VG Sbjct: 11 ELRGLLNTAAHA---YYVLDAPVMEDPVYDRLYRELLELESADPSLVTVDSPTQRVG 64 >gi|163938297|ref|YP_001643181.1| NAD-dependent DNA ligase LigA [Bacillus weihenstephanensis KBAB4] gi|229165272|ref|ZP_04293059.1| DNA ligase [Bacillus cereus AH621] gi|254781256|sp|A9VRG3|DNLJ_BACWK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|163860494|gb|ABY41553.1| DNA ligase, NAD-dependent [Bacillus weihenstephanensis KBAB4] gi|228618097|gb|EEK75135.1| DNA ligase [Bacillus cereus AH621] Length = 669 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD+P +D YDR + L L+ + PE ED P VG Sbjct: 24 YHVLDNPSVSDAEYDRDMQELIKLEAENPEFMSEDSPSIRVG 65 >gi|256959858|ref|ZP_05564029.1| NAD-dependent DNA ligase [Enterococcus faecalis Merz96] gi|293385046|ref|ZP_06630880.1| DNA ligase, NAD-dependent [Enterococcus faecalis R712] gi|293389317|ref|ZP_06633778.1| DNA ligase, NAD-dependent [Enterococcus faecalis S613] gi|312906035|ref|ZP_07765048.1| DNA ligase, NAD-dependent [Enterococcus faecalis DAPTO 512] gi|312909381|ref|ZP_07768237.1| DNA ligase, NAD-dependent [Enterococcus faecalis DAPTO 516] gi|256950354|gb|EEU66986.1| NAD-dependent DNA ligase [Enterococcus faecalis Merz96] gi|291077724|gb|EFE15088.1| DNA ligase, NAD-dependent [Enterococcus faecalis R712] gi|291081339|gb|EFE18302.1| DNA ligase, NAD-dependent [Enterococcus faecalis S613] gi|310628030|gb|EFQ11313.1| DNA ligase, NAD-dependent [Enterococcus faecalis DAPTO 512] gi|311290405|gb|EFQ68961.1| DNA ligase, NAD-dependent [Enterococcus faecalis DAPTO 516] Length = 676 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YDR+ + L ++ +FP+L D P VG Sbjct: 29 YYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVG 70 >gi|229823252|ref|ZP_04449321.1| hypothetical protein GCWU000282_00550 [Catonella morbi ATCC 51271] gi|229787418|gb|EEP23532.1| hypothetical protein GCWU000282_00550 [Catonella morbi ATCC 51271] Length = 671 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EV++L+ +H YY LD L +D YD + L+ ++ PE D P VG Sbjct: 14 EVKHLLNDYAYH---YYVLDQSLVSDASYDALYRELEEIEAAHPEWITPDSPTQRVG 67 >gi|219681449|ref|YP_002467834.1| DNA ligase (NAD+) [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471124|ref|ZP_05635123.1| DNA ligase (NAD+) [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254781271|sp|B8D8M5|DNLJ_BUCA5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219624292|gb|ACL30447.1| DNA ligase (NAD+) [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 675 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 31/57 (54%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L KI L ++ +Y+ L+ + +D YD + +L L+ + EL D P VG Sbjct: 7 KIEKLRKILLKYEYFYHTLNQSIISDAEYDYLFRQLYELELKHKELIPSDSPTQKVG 63 >gi|218885555|ref|YP_002434876.1| DNA ligase, NAD-dependent [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|254781315|sp|B8DJT6|DNLJ_DESVM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218756509|gb|ACL07408.1| DNA ligase, NAD-dependent [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 808 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY LDD +D YD + L ++ ++P L D P + VG Sbjct: 46 YHSHRYYVLDDAEISDAEYDALFRELQDIEAEWPSLRTPDSPTHRVG 92 >gi|307747505|gb|ADN90775.1| DNA ligase [Campylobacter jejuni subsp. jejuni M1] Length = 647 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 64 EYLVKIALHH--QKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL K+AL + + YY D+PL +D YD + L A +EQ + +D P + Sbjct: 5 EYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELRAFEEQNKDEISKDSPTQKIA 61 >gi|290967938|ref|ZP_06559488.1| DNA ligase (NAD(+)) [Megasphaera genomosp. type_1 str. 28L] gi|290782077|gb|EFD94655.1| DNA ligase (NAD(+)) [Megasphaera genomosp. type_1 str. 28L] Length = 668 Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P +D YD + L+ L++++P+ D P +G Sbjct: 26 YYTLDAPTVSDYEYDMLYRELETLEKKYPQWVTPDSPTQRIG 67 >gi|229009789|ref|ZP_04167009.1| DNA ligase [Bacillus mycoides DSM 2048] gi|228751407|gb|EEM01213.1| DNA ligase [Bacillus mycoides DSM 2048] Length = 669 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD+P +D YDR + L L+ + PE ED P VG Sbjct: 24 YHVLDNPSVSDAEYDRDMQELIKLEAENPEFMSEDSPSIRVG 65 >gi|229131294|ref|ZP_04260196.1| DNA ligase [Bacillus cereus BDRD-ST196] gi|228652180|gb|EEL08115.1| DNA ligase [Bacillus cereus BDRD-ST196] Length = 669 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD+P +D YDR + L L+ + PE ED P VG Sbjct: 24 YHVLDNPSVSDAEYDRDMQELIKLEAENPEFMSEDSPSIRVG 65 >gi|229137130|ref|ZP_04265749.1| DNA ligase [Bacillus cereus BDRD-ST26] gi|228646302|gb|EEL02517.1| DNA ligase [Bacillus cereus BDRD-ST26] Length = 74 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|311029281|ref|ZP_07707371.1| NAD-dependent DNA ligase LigA [Bacillus sp. m3-13] Length = 668 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD P +D YD + + L L+++ PEL ED P VG Sbjct: 24 YHVLDKPSVSDAEYDSLLQELLTLEKEHPELQTEDSPTQRVG 65 >gi|237757130|ref|ZP_04585563.1| DNA ligase, NAD-dependent [Sulfurihydrogenibium yellowstonense SS-5] gi|237690707|gb|EEP59882.1| DNA ligase, NAD-dependent [Sulfurihydrogenibium yellowstonense SS-5] Length = 490 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 34/64 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+K EA VE L ++ H YY L P+ +D YD++ + L ++ ++PEL D P Sbjct: 25 LTKEEAKKIVEDLREVIRFHDWRYYILAQPVISDYEYDKLFKLLKDIENKYPELITPDSP 84 Query: 114 WNTV 117 + Sbjct: 85 TQRI 88 >gi|229055132|ref|ZP_04195560.1| DNA ligase [Bacillus cereus AH603] gi|228721208|gb|EEL72737.1| DNA ligase [Bacillus cereus AH603] Length = 669 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD+P +D YDR + L L+ + PE ED P VG Sbjct: 24 YHVLDNPSVSDAEYDRDMQELIKLEAENPEFMSEDSPSIRVG 65 >gi|218961271|ref|YP_001741046.1| DNA ligase, NAD-dependent [Candidatus Cloacamonas acidaminovorans] gi|167729928|emb|CAO80840.1| DNA ligase, NAD-dependent [Candidatus Cloacamonas acidaminovorans] Length = 667 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH + YY L P +D YD + + L L+ Q+ E E+ P VG Sbjct: 19 HHNRLYYTLAKPEISDYEYDMLVKELQELEAQYAEGAVEESPTQKVG 65 >gi|326392616|ref|ZP_08213952.1| DNA ligase (NAD(+)) [Thermoanaerobacter ethanolicus JW 200] gi|325991342|gb|EGD49998.1| DNA ligase (NAD(+)) [Thermoanaerobacter ethanolicus JW 200] Length = 210 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY LD P +D YD + L L+E++PE D P VG Sbjct: 21 YHNYRYYVLDQPEISDYEYDMLMRELIELEEKYPEFKTPDSPSQRVG 67 >gi|308176651|ref|YP_003916057.1| DNA ligase [Arthrobacter arilaitensis Re117] gi|307744114|emb|CBT75086.1| DNA ligase [Arthrobacter arilaitensis Re117] Length = 767 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 28/55 (50%) Query: 64 EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV+ H+ YY+ D PL +D YD + L L+ +P L +D P VG Sbjct: 33 DQLVEQIRAHRDAYYQNDAPLVSDVEYDALFHELQLLEATYPILAGQDSPTQEVG 87 >gi|294140434|ref|YP_003556412.1| DNA ligase, NAD-dependent [Shewanella violacea DSS12] gi|293326903|dbj|BAJ01634.1| DNA ligase, NAD-dependent [Shewanella violacea DSS12] Length = 683 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 30/73 (41%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 DK + S + E+ L I H YY D P D YDR+ ++L L+ P Sbjct: 4 DKIQDHASFNIQAVAQEIAELTDILNGHNYCYYVDDAPSIPDAEYDRLLKQLKVLETAHP 63 Query: 106 ELFDEDHPWNTVG 118 E D P VG Sbjct: 64 EYCFPDSPTQRVG 76 >gi|269836970|ref|YP_003319198.1| DNA ligase, NAD-dependent [Sphaerobacter thermophilus DSM 20745] gi|269786233|gb|ACZ38376.1| DNA ligase, NAD-dependent [Sphaerobacter thermophilus DSM 20745] Length = 680 Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P +D YD + L L+ PEL D P VG Sbjct: 24 YYVLDQPSVSDAEYDALMNELRELEAAHPELITPDSPTQRVG 65 >gi|189347498|ref|YP_001944027.1| DNA ligase, NAD-dependent [Chlorobium limicola DSM 245] gi|254781283|sp|B3EFT6|DNLJ_CHLL2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|189341645|gb|ACD91048.1| DNA ligase, NAD-dependent [Chlorobium limicola DSM 245] Length = 673 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + A E+ L K H YY +P+ +D +DR+ E+L AL+ P+L D P Sbjct: 1 MDRAMAADEIARLRKEIERHNYLYYVEAEPVISDYEFDRLLEQLIALERLHPDLVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SLRVG 65 >gi|290580089|ref|YP_003484481.1| DNA ligase [Streptococcus mutans NN2025] gi|254996988|dbj|BAH87589.1| DNA ligase [Streptococcus mutans NN2025] Length = 652 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 17/53 (32%), Positives = 30/53 (56%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV++ + + YY D+P +D YD++ L L+++FPE + P + VG Sbjct: 8 LVQLLNQYAREYYTKDNPSVSDAEYDKLYRELVELEKEFPEDILSNSPTHRVG 60 >gi|172060972|ref|YP_001808624.1| DNA ligase, NAD-dependent [Burkholderia ambifaria MC40-6] gi|254781273|sp|B1YSH2|DNLJ_BURA4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|171993489|gb|ACB64408.1| DNA ligase, NAD-dependent [Burkholderia ambifaria MC40-6] Length = 691 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L L+ P+L D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFGELQQLETDHPDLVTPDSPTQRVG 72 >gi|260911472|ref|ZP_05918061.1| DNA ligase [Prevotella sp. oral taxon 472 str. F0295] gi|260634401|gb|EEX52502.1| DNA ligase [Prevotella sp. oral taxon 472 str. F0295] Length = 666 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY + P +D +D + L L+ + PE++D + P VG Sbjct: 16 HHNYLYYVQNSPTLSDQEFDHLMRELQDLEAKHPEVYDPNSPTQRVG 62 >gi|115352108|ref|YP_773947.1| DNA ligase [Burkholderia ambifaria AMMD] gi|122322835|sp|Q0BE10|DNLJ_BURCM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|115282096|gb|ABI87613.1| DNA ligase, NAD-dependent [Burkholderia ambifaria AMMD] Length = 691 Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L L+ P+L D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFGELQQLETDHPDLVTPDSPTQRVG 72 >gi|167837047|ref|ZP_02463930.1| DNA ligase, NAD-dependent [Burkholderia thailandensis MSMB43] Length = 691 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L ++ + P+L D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFVELQQIEAEHPDLVTPDSPTQRVG 72 >gi|225849186|ref|YP_002729350.1| DNA ligase, NAD-dependent [Sulfurihydrogenibium azorense Az-Fu1] gi|254781434|sp|C1DW63|DNLJ_SULAA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|225644062|gb|ACN99112.1| DNA ligase, NAD-dependent [Sulfurihydrogenibium azorense Az-Fu1] Length = 701 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 35/67 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + S+ + +A +E L ++ H YY L P+ +D YD++ + L ++ ++P+L Sbjct: 22 IKSIDRKKAESIIEDLREVIRFHDWRYYVLAQPVISDYEYDKLFKLLKDIESKYPDLITP 81 Query: 111 DHPWNTV 117 D P V Sbjct: 82 DSPTQRV 88 >gi|254440003|ref|ZP_05053497.1| DNA ligase, NAD-dependent [Octadecabacter antarcticus 307] gi|198255449|gb|EDY79763.1| DNA ligase, NAD-dependent [Octadecabacter antarcticus 307] Length = 706 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 33/74 (44%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + + +L+K EA E+ L + Y++ D P D YD + R ++ +F Sbjct: 1 MSATTSIENLTKDEAAQELARLSALLAQANAEYHQADAPRIPDADYDALKLRNAMIEARF 60 Query: 105 PELFDEDHPWNTVG 118 +L D P TVG Sbjct: 61 SDLKRRDSPSETVG 74 >gi|170703080|ref|ZP_02893902.1| DNA ligase, NAD-dependent [Burkholderia ambifaria IOP40-10] gi|170132009|gb|EDT00515.1| DNA ligase, NAD-dependent [Burkholderia ambifaria IOP40-10] Length = 691 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L L+ P+L D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFGELQQLETDHPDLVTPDSPTQRVG 72 >gi|260363295|ref|ZP_05776162.1| DNA ligase (NAD+) [Vibrio parahaemolyticus K5030] gi|308113593|gb|EFO51133.1| DNA ligase (NAD+) [Vibrio parahaemolyticus K5030] Length = 655 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY D+P D YDR+ L ++ Q P+L D P VG Sbjct: 3 YHAVRYYVEDNPEIPDAEYDRLMRELLEIEAQHPDLVTVDSPSQRVG 49 >gi|163782033|ref|ZP_02177032.1| D-tyrosyl-tRNA deacylase [Hydrogenivirga sp. 128-5-R1-1] gi|159882565|gb|EDP76070.1| D-tyrosyl-tRNA deacylase [Hydrogenivirga sp. 128-5-R1-1] Length = 715 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 3/87 (3%) Query: 31 EAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLY 90 E + + R L S L++ +K K EA V+ L ++ +H YY P+ +D Y Sbjct: 7 ERELIELTRKLLSELERIRKA---GKEEAQEYVQELREVINYHDYKYYVQASPVISDYEY 63 Query: 91 DRVSERLDALQEQFPELFDEDHPWNTV 117 D++ L L++++PEL D P V Sbjct: 64 DQLFRALRDLEKKYPELITPDSPTQRV 90 >gi|227509971|ref|ZP_03940020.1| NAD-dependent DNA ligase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190577|gb|EEI70644.1| NAD-dependent DNA ligase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 675 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Query: 75 KW---YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 KW YY D P D +YD+ ++L L+ FP++ D P VG Sbjct: 24 KWADEYYTYDSPSVEDSVYDQTYQQLVDLETTFPQIVTPDSPTQKVG 70 >gi|215918993|ref|NP_819574.2| NAD-dependent DNA ligase [Coxiella burnetii RSA 493] gi|218512010|sp|Q83DZ6|DNLJ_COXBU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|206583878|gb|AAO90088.2| NAD-dependent DNA ligase [Coxiella burnetii RSA 493] Length = 673 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 22/46 (47%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY L P D +YD + L+ L++++PE P VG Sbjct: 24 HNYRYYVLSQPTIPDSVYDELFHELEKLEKKYPETITPSSPTQRVG 69 >gi|71082725|ref|YP_265444.1| DNA ligase [Candidatus Pelagibacter ubique HTCC1062] gi|123775550|sp|Q4FPL3|DNLJ_PELUB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|71061838|gb|AAZ20841.1| DNA ligase [Candidatus Pelagibacter ubique HTCC1062] Length = 676 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Query: 61 IEVEYLVKIAL--HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E+EYL KI L H K YY + P+ +D +D + + + L+ ++ L E P ++G Sbjct: 6 LEIEYLKKIDLFQRHNKHYYDKNKPIVSDQEFDLLKKDIIDLERKYKFLKSEYSPTKSIG 65 Query: 119 Y 119 + Sbjct: 66 F 66 >gi|330830678|ref|YP_004393630.1| NAD-dependent DNA ligase LigA [Aeromonas veronii B565] gi|328805814|gb|AEB51013.1| NAD-dependent DNA ligase LigA [Aeromonas veronii B565] Length = 787 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY LD+P D YDR+ L AL+ PEL P VG Sbjct: 20 HQ--YYVLDNPTVPDAEYDRLMRELIALEADHPELKTPASPSVRVG 63 >gi|291454298|ref|ZP_06593688.1| NAD-dependent DNA ligase LigA [Streptomyces albus J1074] gi|291357247|gb|EFE84149.1| NAD-dependent DNA ligase LigA [Streptomyces albus J1074] Length = 736 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 27/55 (49%) Query: 64 EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++L + H+ YY D P+ +D +DR L L+EQ+P L D P V Sbjct: 27 KHLAEQVEEHRFRYYVNDQPVVSDAEFDRQLRALTQLEEQYPPLRTPDSPTQKVA 81 >gi|239982451|ref|ZP_04704975.1| NAD-dependent DNA ligase LigA [Streptomyces albus J1074] Length = 728 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 27/55 (49%) Query: 64 EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++L + H+ YY D P+ +D +DR L L+EQ+P L D P V Sbjct: 19 KHLAEQVEEHRFRYYVNDQPVVSDAEFDRQLRALTQLEEQYPPLRTPDSPTQKVA 73 >gi|89097084|ref|ZP_01169975.1| DNA ligase [Bacillus sp. NRRL B-14911] gi|89088464|gb|EAR67574.1| DNA ligase [Bacillus sp. NRRL B-14911] Length = 668 Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ + L L+ + P+L D P VG Sbjct: 24 YYVLDKPSVPDSEYDRLLKELMELENEHPQLKTADSPTQRVG 65 >gi|307326508|ref|ZP_07605703.1| DNA ligase, NAD-dependent [Streptomyces violaceusniger Tu 4113] gi|306887916|gb|EFN18907.1| DNA ligase, NAD-dependent [Streptomyces violaceusniger Tu 4113] Length = 732 Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 25/46 (54%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H+ YY D P+ +D +D++ L+AL+E+ P L D P V Sbjct: 27 HRFRYYVKDAPVVSDAEFDKLMRELEALEEETPALRTPDSPTQKVA 72 >gi|317056400|ref|YP_004104867.1| DNA ligase, NAD-dependent [Ruminococcus albus 7] gi|315448669|gb|ADU22233.1| DNA ligase, NAD-dependent [Ruminococcus albus 7] Length = 659 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 30/63 (47%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 K A ++ LV+I +H + YY D +D YD + L L+ P+L +D P Sbjct: 4 KESAKKRIDELVEILNYHSRLYYVEDRNEISDYEYDMLQNELKKLEAANPDLIRKDSPTQ 63 Query: 116 TVG 118 VG Sbjct: 64 RVG 66 >gi|255533202|ref|YP_003093574.1| DNA ligase, NAD-dependent [Pedobacter heparinus DSM 2366] gi|255346186|gb|ACU05512.1| DNA ligase, NAD-dependent [Pedobacter heparinus DSM 2366] Length = 670 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S E ++ LVK H YY L P D +D+ E L L+ +PE D + P Sbjct: 1 MSGSEVKTNMDALVKELNQHSYNYYVLAMPTIADYTFDKKLEELAQLELAYPEFADPNSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TRKVG 65 >gi|240142614|ref|YP_002967127.1| DNA ligase, NAD(+)-dependent [Methylobacterium extorquens AM1] gi|240012561|gb|ACS43786.1| DNA ligase, NAD(+)-dependent [Methylobacterium extorquens AM1] Length = 712 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 30/72 (41%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 +A V LS +A IE L H + Y+ D P+ TD YD + R ++ P Sbjct: 8 RAVPVAELSNEDARIEHAALASEIAEHDERYHGQDAPIVTDAEYDALRRRAAEIEAAHPA 67 Query: 107 LFDEDHPWNTVG 118 L E VG Sbjct: 68 LAAESEVAKKVG 79 >gi|227485017|ref|ZP_03915333.1| DNA ligase (NAD(+)) [Anaerococcus lactolyticus ATCC 51172] gi|227237014|gb|EEI87029.1| DNA ligase (NAD(+)) [Anaerococcus lactolyticus ATCC 51172] Length = 667 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD PL +DG YD++ +L LQ+ E+ P N VG Sbjct: 21 YYTLDKPLVSDGEYDKLYNQLIKLQKNLA-YVPENSPTNRVG 61 >gi|157964864|ref|YP_001499688.1| NAD-dependent DNA ligase LigA [Rickettsia massiliae MTU5] gi|166216234|sp|A8F2K5|DNLJ_RICM5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157844640|gb|ABV85141.1| DNA ligase, NAD-dependent [Rickettsia massiliae MTU5] Length = 689 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Query: 54 LSKGEAMIEVEYLV-KIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +S+ EA +E L KIA ++ +Y D+PL +D YD++ L+++FP L E+ Sbjct: 7 ISEKEAQKLLEELADKIAAYNHAYYIE-DNPLVSDSEYDQLFNTNLKLEQKFPHLILENS 65 Query: 113 PWNTVG 118 P VG Sbjct: 66 PSKKVG 71 >gi|117618613|ref|YP_855770.1| DNA ligase, NAD-dependent [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166215386|sp|A0KHL9|DNLJ_AERHH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|117560020|gb|ABK36968.1| DNA ligase, NAD-dependent [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 668 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L ++ + + YY LD+P D YDR+ L L+ + PEL P VG Sbjct: 11 LCELLIEYGHQYYVLDNPTVPDAEYDRLMRELIVLEAEHPELKTPASPSVRVG 63 >gi|312796238|ref|YP_004029160.1| NAD-dependent DNA ligase [Burkholderia rhizoxinica HKI 454] gi|312168013|emb|CBW75016.1| NAD-dependent DNA ligase (EC 6.5.1.2) [Burkholderia rhizoxinica HKI 454] Length = 681 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YD++ + L+ ++ P+L D P VG Sbjct: 31 YYVLDRPEIPDAEYDKLFKELEQIEADHPDLITPDSPTQRVG 72 >gi|152997408|ref|YP_001342243.1| DNA ligase, NAD-dependent [Marinomonas sp. MWYL1] gi|190359264|sp|A6W0S9|DNLJ_MARMS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|150838332|gb|ABR72308.1| DNA ligase, NAD-dependent [Marinomonas sp. MWYL1] Length = 672 Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ D+P+ D +YDR +L +++ + PE D P VG Sbjct: 20 YHVKDEPIVPDAVYDRDYRQLQSIEAEHPEWIQADSPTQRVG 61 >gi|332169163|gb|AEE18418.1| DNA ligase, NAD-dependent [Krokinobacter diaphorus 4H-3-7-5] Length = 664 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 26/46 (56%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P +D +D+ ++L+AL+ PE D + P + VG Sbjct: 17 HNHSYYVLDTPTISDFDFDQKLKQLEALEAAHPEFDDPNSPTHRVG 62 >gi|325681379|ref|ZP_08160905.1| DNA ligase (NAD+) [Ruminococcus albus 8] gi|324106869|gb|EGC01159.1| DNA ligase (NAD+) [Ruminococcus albus 8] Length = 665 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 27/63 (42%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 K A ++ LV +H YY D +D YD + L L+ Q+PE D P Sbjct: 10 KDNAKKRIDELVATLNYHAHLYYVEDRNEISDYDYDMMQNELKKLEAQYPEFIRPDSPTQ 69 Query: 116 TVG 118 VG Sbjct: 70 RVG 72 >gi|255009394|ref|ZP_05281520.1| putative DNA ligase [Bacteroides fragilis 3_1_12] gi|313147153|ref|ZP_07809346.1| DNA ligase [Bacteroides fragilis 3_1_12] gi|313135920|gb|EFR53280.1| DNA ligase [Bacteroides fragilis 3_1_12] Length = 665 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 67 VKIALHHQKW-YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++I LH + YY L+ P +D +D + L L+++ PE DE+ P VG Sbjct: 10 LRIQLHQHNYNYYVLNAPEISDKEFDDLMRELQTLEQEHPEYKDENSPTMRVG 62 >gi|238026897|ref|YP_002911128.1| DNA ligase, NAD-dependent [Burkholderia glumae BGR1] gi|237876091|gb|ACR28424.1| DNA ligase, NAD-dependent [Burkholderia glumae BGR1] Length = 747 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L ++ + P+ D P VG Sbjct: 32 YYVLDQPELLDAEYDRLFRELQQIEAEHPDFITPDSPTQRVG 73 >gi|124024594|ref|YP_001018901.1| NAD-dependent DNA ligase LigA [Prochlorococcus marinus str. MIT 9303] gi|166216228|sp|A2CDS6|DNLJ_PROM3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|123964880|gb|ABM79636.1| NAD-dependent DNA ligase [Prochlorococcus marinus str. MIT 9303] Length = 696 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 TS + E E+ L+ A H YY LD P D +YDR+ L L+ + L D Sbjct: 4 TSRTPPERAAELRQLLNQAAHS---YYVLDTPTMEDAVYDRLYRELLDLEVKDSSLLTPD 60 Query: 112 HPWNTVG 118 P +G Sbjct: 61 SPTQRIG 67 >gi|122971128|sp|Q14L37|DNLJ_SPICI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|110005471|emb|CAK99793.1| dna ligase protein [Spiroplasma citri] Length = 667 Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%) Query: 74 QKW---YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +KW YY D+P +D YDR + L A+++Q+ EL D P V Sbjct: 18 EKWNYEYYVNDNPSVSDQEYDRALQELIAIEQQYSELITIDSPTQRV 64 >gi|53719773|ref|YP_108759.1| DNA ligase [Burkholderia pseudomallei K96243] gi|167816389|ref|ZP_02448069.1| DNA ligase [Burkholderia pseudomallei 91] gi|81379503|sp|Q63T07|DNLJ_BURPS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|52210187|emb|CAH36166.1| DNA ligase [Burkholderia pseudomallei K96243] Length = 691 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L ++ + P+L D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFVELQRIEAEHPDLVTPDSPTQRVG 72 >gi|116493340|ref|YP_805075.1| NAD-dependent DNA ligase [Pediococcus pentosaceus ATCC 25745] gi|122265196|sp|Q03DT9|DNLJ_PEDPA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116103490|gb|ABJ68633.1| NAD-dependent DNA ligase [Pediococcus pentosaceus ATCC 25745] Length = 675 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 31/70 (44%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 KK+ + EA + L +I K YY D P D YD L AL+E FPE+ Sbjct: 5 KKLEEMQVEEASKLAQNLREILDRWSKLYYTKDAPEVEDYEYDEKYADLVALEEAFPEII 64 Query: 109 DEDHPWNTVG 118 +D VG Sbjct: 65 TQDSITQRVG 74 >gi|224372650|ref|YP_002607022.1| NAD-dependent DNA ligase LigA [Nautilia profundicola AmH] gi|254781379|sp|B9L8R4|DNLJ_NAUPA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|223589900|gb|ACM93636.1| DNA ligase, NAD-dependent [Nautilia profundicola AmH] Length = 656 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 15/43 (34%), Positives = 25/43 (58%) Query: 76 WYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +YY LD+PL TD YD++ ++ +++ P+ D P VG Sbjct: 21 YYYVLDNPLVTDEEYDKLYHEVEEYEKKHPDKIDPTSPTQRVG 63 >gi|209522379|ref|ZP_03270993.1| DNA ligase, NAD-dependent [Burkholderia sp. H160] gi|209497185|gb|EDZ97426.1| DNA ligase, NAD-dependent [Burkholderia sp. H160] Length = 688 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YD++ + L+ ++ + P+L D P VG Sbjct: 32 YYVLDQPDLPDAEYDKLFKELERIEAEHPDLIVPDSPTQRVG 73 >gi|163788595|ref|ZP_02183040.1| putative DNA ligase [Flavobacteriales bacterium ALC-1] gi|159875832|gb|EDP69891.1| putative DNA ligase [Flavobacteriales bacterium ALC-1] Length = 664 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L + H YY LD+ +D +D + L AL+E PE FD + P VG Sbjct: 7 IEILREELRQHNYNYYILDNATISDYEFDIKLKELQALEEANPEFFDPNSPTQRVG 62 >gi|312863154|ref|ZP_07723392.1| DNA ligase (NAD+) [Streptococcus vestibularis F0396] gi|322516268|ref|ZP_08069198.1| NAD-dependent DNA ligase LigA [Streptococcus vestibularis ATCC 49124] gi|311100690|gb|EFQ58895.1| DNA ligase (NAD+) [Streptococcus vestibularis F0396] gi|322125241|gb|EFX96614.1| NAD-dependent DNA ligase LigA [Streptococcus vestibularis ATCC 49124] Length = 652 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + K YY D+P +D YD++ L L+ + PEL D P + VG Sbjct: 14 QYAKEYYTEDNPSVSDADYDKLYRELVDLEVEHPELVQADSPTHRVG 60 >gi|161831535|ref|YP_001596473.1| DNA ligase, NAD-dependent [Coxiella burnetii RSA 331] gi|190359249|sp|A9NC33|DNLJ_COXBR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|161763402|gb|ABX79044.1| DNA ligase, NAD-dependent [Coxiella burnetii RSA 331] Length = 670 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 15/46 (32%), Positives = 22/46 (47%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY L P D +YD + L+ L++++PE P VG Sbjct: 21 HNYRYYVLSQPTIPDSVYDELFHELEKLEKKYPETITPSSPTQRVG 66 >gi|76810783|ref|YP_333980.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 1710b] gi|167720173|ref|ZP_02403409.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei DM98] gi|167911510|ref|ZP_02498601.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 112] gi|254189298|ref|ZP_04895809.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei Pasteur 52237] gi|254259109|ref|ZP_04950163.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 1710a] gi|254297202|ref|ZP_04964655.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 406e] gi|123771899|sp|Q3JR23|DNLJ_BURP1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|76580236|gb|ABA49711.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 1710b] gi|157807762|gb|EDO84932.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 406e] gi|157936977|gb|EDO92647.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei Pasteur 52237] gi|254217798|gb|EET07182.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 1710a] Length = 691 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L ++ + P+L D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFVELQRIEAEHPDLVTPDSPTQRVG 72 >gi|126453906|ref|YP_001066758.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 1106a] gi|134277579|ref|ZP_01764294.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 305] gi|167739178|ref|ZP_02411952.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 14] gi|167824768|ref|ZP_02456239.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 9] gi|167846299|ref|ZP_02471807.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei B7210] gi|167894881|ref|ZP_02482283.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 7894] gi|167903270|ref|ZP_02490475.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei NCTC 13177] gi|167919520|ref|ZP_02506611.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei BCC215] gi|217421846|ref|ZP_03453350.1| DNA ligase (NAD(+)) [Burkholderia pseudomallei 576] gi|226198948|ref|ZP_03794511.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei Pakistan 9] gi|237812814|ref|YP_002897265.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei MSHR346] gi|242317106|ref|ZP_04816122.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 1106b] gi|254179316|ref|ZP_04885915.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 1655] gi|254198094|ref|ZP_04904516.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei S13] gi|166215566|sp|A3NWN7|DNLJ_BURP0 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|126227548|gb|ABN91088.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 1106a] gi|134251229|gb|EBA51308.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 305] gi|169654835|gb|EDS87528.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei S13] gi|184209856|gb|EDU06899.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 1655] gi|217395588|gb|EEC35606.1| DNA ligase (NAD(+)) [Burkholderia pseudomallei 576] gi|225929048|gb|EEH25072.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei Pakistan 9] gi|237506455|gb|ACQ98773.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei MSHR346] gi|242140345|gb|EES26747.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 1106b] Length = 691 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L ++ + P+L D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFVELQRIEAEHPDLVTPDSPTQRVG 72 >gi|53723744|ref|YP_103200.1| DNA ligase, NAD-dependent [Burkholderia mallei ATCC 23344] gi|67639492|ref|ZP_00438344.1| DNA ligase, NAD-dependent [Burkholderia mallei GB8 horse 4] gi|121600643|ref|YP_993378.1| DNA ligase, NAD-dependent [Burkholderia mallei SAVP1] gi|124385135|ref|YP_001029185.1| DNA ligase, NAD-dependent [Burkholderia mallei NCTC 10229] gi|126450807|ref|YP_001080885.1| DNA ligase, NAD-dependent [Burkholderia mallei NCTC 10247] gi|167004074|ref|ZP_02269848.1| DNA ligase, NAD-dependent [Burkholderia mallei PRL-20] gi|254178005|ref|ZP_04884660.1| DNA ligase, NAD-dependent [Burkholderia mallei ATCC 10399] gi|254206491|ref|ZP_04912843.1| DNA ligase, NAD-dependent [Burkholderia mallei JHU] gi|254358100|ref|ZP_04974373.1| DNA ligase, NAD-dependent [Burkholderia mallei 2002721280] gi|81604820|sp|Q62JB9|DNLJ_BURMA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166215563|sp|A3MKU9|DNLJ_BURM7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166215564|sp|A2SB66|DNLJ_BURM9 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166215565|sp|A1V575|DNLJ_BURMS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|52427167|gb|AAU47760.1| DNA ligase, NAD-dependent [Burkholderia mallei ATCC 23344] gi|121229453|gb|ABM51971.1| DNA ligase, NAD-dependent [Burkholderia mallei SAVP1] gi|124293155|gb|ABN02424.1| DNA ligase (NAD(+)) [Burkholderia mallei NCTC 10229] gi|126243677|gb|ABO06770.1| DNA ligase (NAD(+)) [Burkholderia mallei NCTC 10247] gi|147753934|gb|EDK60999.1| DNA ligase, NAD-dependent [Burkholderia mallei JHU] gi|148027227|gb|EDK85248.1| DNA ligase, NAD-dependent [Burkholderia mallei 2002721280] gi|160699044|gb|EDP89014.1| DNA ligase, NAD-dependent [Burkholderia mallei ATCC 10399] gi|238520039|gb|EEP83503.1| DNA ligase, NAD-dependent [Burkholderia mallei GB8 horse 4] gi|243060513|gb|EES42699.1| DNA ligase, NAD-dependent [Burkholderia mallei PRL-20] Length = 691 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L ++ + P+L D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFVELQRIEAEHPDLVTPDSPTQRVG 72 >gi|126441747|ref|YP_001059474.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 668] gi|166215567|sp|A3NAV3|DNLJ_BURP6 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|126221240|gb|ABN84746.1| DNA ligase (NAD(+)) [Burkholderia pseudomallei 668] Length = 691 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L ++ + P+L D P VG Sbjct: 31 YYVLDQPDLPDAEYDRLFVELQRIEAEHPDLVTPDSPTQRVG 72 >gi|293363574|ref|ZP_06610330.1| DNA ligase (NAD(+)) [Mycoplasma alligatoris A21JP2] gi|292552923|gb|EFF41677.1| DNA ligase (NAD(+)) [Mycoplasma alligatoris A21JP2] Length = 660 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%) Query: 75 KW---YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 KW YY LD P TD +YD+ + L ++ +PE E+ P +G Sbjct: 18 KWNNEYYNLDTPSVTDEVYDQEYQELLEIESMYPEAILENSPSQIIG 64 >gi|156407081|ref|XP_001641373.1| predicted protein [Nematostella vectensis] gi|156228511|gb|EDO49310.1| predicted protein [Nematostella vectensis] Length = 358 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 7/84 (8%) Query: 17 HNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKW 76 HN P +W L +A+ K A E L+ A + KGE + + + I Q W Sbjct: 228 HNAAPLRWSAALAKDAQAWAGKLAREGRLEHASREDRYYKGENICRMSHHFDIGDALQIW 287 Query: 77 Y-----YRLDDPLF--TDGLYDRV 93 Y Y+ D+P F T G + ++ Sbjct: 288 YNESESYQYDNPGFALTTGHFTQI 311 >gi|78357136|ref|YP_388585.1| DNA ligase, NAD-dependent [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123768784|sp|Q30ZK6|DNLJ_DESDG RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|78219541|gb|ABB38890.1| DNA ligase, NAD-dependent [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 705 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L + +H YY +D+P +D YD + L L+E+ PE P + VG Sbjct: 19 MEELRTLLEYHGHRYYVMDEPEISDAEYDALFRELVRLEEEHPEHIHPGSPTHKVG 74 >gi|331703733|ref|YP_004400420.1| DNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802288|emb|CBW54442.1| DNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 668 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK +A++ + L + K YY D+P D YD + L +L+ +PEL D P Sbjct: 1 MSKDKALLRINQLKEQLNLWSKQYYVDDNPSVDDIEYDLALKELISLETLYPELITSDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQKVG 65 >gi|327475235|gb|AEA77212.1| DNA ligase [Exiguobacterium sp. EPVM] Length = 664 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L ++ +PEL D P VG Sbjct: 21 YYVLDRPSVPDAEYDRLMNELIEIETDYPELRSPDSPTQRVG 62 >gi|315452902|ref|YP_004073172.1| DNA ligase [Helicobacter felis ATCC 49179] gi|315131954|emb|CBY82582.1| DNA ligase [Helicobacter felis ATCC 49179] Length = 733 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 26/52 (50%) Query: 67 VKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V+ A + YY LDDPL +D YD + +++ + PE E P VG Sbjct: 12 VERACQYAHHYYVLDDPLVSDFEYDTLYQQIQDYEHAHPEQILEHSPTQRVG 63 >gi|256383839|gb|ACU78409.1| DNA ligase, NAD-dependent [Mycoplasma mycoides subsp. capri str. GM12] gi|256384670|gb|ACU79239.1| DNA ligase, NAD-dependent [Mycoplasma mycoides subsp. capri str. GM12] gi|296455996|gb|ADH22231.1| DNA ligase, NAD-dependent [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 668 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK +A++ + L + K YY D+P D YD + L +L+ +PEL D P Sbjct: 1 MSKDKALLRINQLKEQLNLWSKQYYVDDNPSVDDIEYDLALKELISLETLYPELITSDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQKVG 65 >gi|170727191|ref|YP_001761217.1| DNA ligase, NAD-dependent [Shewanella woodyi ATCC 51908] gi|254781418|sp|B1KJT5|DNLJ_SHEWM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|169812538|gb|ACA87122.1| DNA ligase, NAD-dependent [Shewanella woodyi ATCC 51908] Length = 670 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A+ E++ L + H YY D P D YDR+ RL L+ + P L P VG Sbjct: 3 AIEEIKQLTETINEHNHSYYVEDSPSVPDAEYDRLINRLKQLEGENPHLCLPTSPTQRVG 62 >gi|330995784|ref|ZP_08319681.1| DNA ligase [Paraprevotella xylaniphila YIT 11841] gi|329574514|gb|EGG56079.1| DNA ligase [Paraprevotella xylaniphila YIT 11841] Length = 669 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 27/61 (44%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E ++E L H YY L+ P +D +DR+ L L+ PE D D P V Sbjct: 4 EVKEQIERLRSELHRHNYNYYVLNAPEISDQEFDRMMRELQDLEAAHPEFDDPDSPTRRV 63 Query: 118 G 118 G Sbjct: 64 G 64 >gi|222086432|ref|YP_002544966.1| DNA ligase, NAD-dependent [Agrobacterium radiobacter K84] gi|254781247|sp|B9JH39|DNLJ_AGRRK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|221723880|gb|ACM27036.1| DNA ligase, NAD-dependent [Agrobacterium radiobacter K84] Length = 717 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ D P +D YD + R DA++ +FP L D P VG Sbjct: 34 YHGNDAPEISDAEYDALKRRNDAIEARFPALVRADSPSRRVG 75 >gi|153003607|ref|YP_001377932.1| DNA ligase, NAD-dependent [Anaeromyxobacter sp. Fw109-5] gi|166215389|sp|A7H8A2|DNLJ_ANADF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|152027180|gb|ABS24948.1| DNA ligase, NAD-dependent [Anaeromyxobacter sp. Fw109-5] Length = 699 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 20/41 (48%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY LD P+ D YDR+ L ++ PEL D P V Sbjct: 28 YYVLDRPVLADAEYDRLVRELAEIEAAHPELATSDSPTQRV 68 >gi|329767007|ref|ZP_08258535.1| DNA ligase [Gemella haemolysans M341] gi|328837732|gb|EGF87357.1| DNA ligase [Gemella haemolysans M341] Length = 663 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV + + YY D+P +D YD + ++L+ L+E PE E+ P VG Sbjct: 7 KISKLVSLLNKYSYDYYVEDNPQISDTEYDTLYKQLEKLEENHPEYILENSPTQRVG 63 >gi|325002847|ref|ZP_08123959.1| NAD-dependent DNA ligase LigA [Pseudonocardia sp. P1] Length = 615 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY LD P+ +DG +D + L L++ P L P VG Sbjct: 23 HQFRYYVLDAPVVSDGQFDELWHELLGLEDAHPGLATPQSPTQKVG 68 >gi|289679597|ref|ZP_06500487.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. syringae FF5] Length = 102 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 18 HNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|259047691|ref|ZP_05738092.1| DNA ligase, NAD-dependent [Granulicatella adiacens ATCC 49175] gi|259035882|gb|EEW37137.1| DNA ligase, NAD-dependent [Granulicatella adiacens ATCC 49175] Length = 668 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P TD YD+ L AL+++ PE D P VG Sbjct: 25 YYVEDKPTATDAEYDKAYHELLALEKEHPEFVTADSPTQRVG 66 >gi|24379931|ref|NP_721886.1| NAD-dependent DNA ligase LigA [Streptococcus mutans UA159] gi|81451132|sp|Q8DT49|DNLJ_STRMU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|24377912|gb|AAN59192.1|AE014986_3 DNA ligase [Streptococcus mutans UA159] Length = 652 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 17/53 (32%), Positives = 30/53 (56%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV++ + + YY D+P +D YD++ L L+++FPE + P + VG Sbjct: 8 LVQLLNQYAREYYTKDNPSVSDAEYDKLYRELVELEKEFPEDILPNSPTHRVG 60 >gi|304321380|ref|YP_003855023.1| NAD-dependent DNA ligase [Parvularcula bermudensis HTCC2503] gi|303300282|gb|ADM09881.1| NAD-dependent DNA ligase [Parvularcula bermudensis HTCC2503] Length = 727 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 LS+ EA E+ L + Y DP+ TD YD + R +A++ +FP L D P Sbjct: 10 LSEAEAADELARLAH-EMAAADIAYENADPVMTDAAYDALRRRNEAIEARFPHLRRADSP 68 Query: 114 WNTVG 118 VG Sbjct: 69 SLRVG 73 >gi|157828943|ref|YP_001495185.1| NAD-dependent DNA ligase LigA [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933668|ref|YP_001650457.1| NAD-dependent DNA ligase LigA [Rickettsia rickettsii str. Iowa] gi|166216235|sp|A8GTF2|DNLJ_RICRS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190359278|sp|B0BUZ1|DNLJ_RICRO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157801424|gb|ABV76677.1| NAD-dependent DNA ligase LigA [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908755|gb|ABY73051.1| NAD-dependent DNA ligase [Rickettsia rickettsii str. Iowa] Length = 689 Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Query: 54 LSKGEAMIEVEYLV-KIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +S+ EA +E L KIA ++ +Y D+PL +D YD++ L+++FP L E+ Sbjct: 7 ISEEEAQKLLEELADKIAAYNHAYYIE-DNPLVSDSEYDQLFNTNLKLEQKFPHLILENS 65 Query: 113 PWNTVG 118 P VG Sbjct: 66 PSKKVG 71 >gi|91762853|ref|ZP_01264818.1| DNA ligase [Candidatus Pelagibacter ubique HTCC1002] gi|91718655|gb|EAS85305.1| DNA ligase [Candidatus Pelagibacter ubique HTCC1002] Length = 676 Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Query: 61 IEVEYLVKIALH--HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E+EYL KI L H K YY + P+ +D +D + + + L+ ++ L E P ++G Sbjct: 6 LEIEYLKKIDLFQTHNKHYYDKNKPIVSDQEFDLLKKDIIDLESKYKFLKSEYSPTKSIG 65 Query: 119 Y 119 + Sbjct: 66 F 66 >gi|167041226|gb|ABZ05983.1| putative NAD-dependent DNA ligase adenylation domain protein [uncultured marine microorganism HF4000_001N02] Length = 727 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 25/54 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + +G +E L ++ HH YY P+ TD YD + + L L P+L Sbjct: 6 IEEGAQSARIEELAQLLAHHSDLYYNEAAPVITDAEYDLLFDELKRLDPTHPQL 59 >gi|254796855|ref|YP_003081692.1| DNA ligase, NAD-dependent [Neorickettsia risticii str. Illinois] gi|254590064|gb|ACT69426.1| DNA ligase, NAD-dependent [Neorickettsia risticii str. Illinois] Length = 670 Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 25/50 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 +A E++ L + L H K YY+ D P TD YD + R L E P L Sbjct: 2 KAKKEIQELYEKLLRHNKKYYQDDSPEITDAEYDSIKGRYLKLLEANPSL 51 >gi|227499502|ref|ZP_03929609.1| DNA ligase (NAD(+)) [Anaerococcus tetradius ATCC 35098] gi|227218381|gb|EEI83632.1| DNA ligase (NAD(+)) [Anaerococcus tetradius ATCC 35098] Length = 666 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+PL +DG YD++ ++L L+ + + D + P VG Sbjct: 21 YYTLDEPLVSDGEYDKLYDKLKKLENESGIVLD-NSPTQIVG 61 >gi|222152820|ref|YP_002561997.1| NAD-dependent DNA ligase LigA [Streptococcus uberis 0140J] gi|254781430|sp|B9DRS2|DNLJ_STRU0 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|222113633|emb|CAR41520.1| DNA ligase [Streptococcus uberis 0140J] Length = 652 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 27/47 (57%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ YY D+P +D YD++ L L++++PE +D P VG Sbjct: 14 QYRQEYYTNDNPSVSDQEYDKLYHELIDLEKEYPEYIQKDSPSQAVG 60 >gi|144899097|emb|CAM75961.1| NAD-dependent DNA ligase [Magnetospirillum gryphiswaldense MSR-1] Length = 693 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 30/58 (51%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 ++ +L+ EA IE L + + Y++ D P D YD RL A++ +FPEL Sbjct: 4 EIDALTPFEARIEASALREKLIRWDLAYHQADAPEVDDATYDAAKLRLLAIEARFPEL 61 >gi|254283004|ref|ZP_04957972.1| DNA ligase, NAD-dependent [gamma proteobacterium NOR51-B] gi|219679207|gb|EED35556.1| DNA ligase, NAD-dependent [gamma proteobacterium NOR51-B] Length = 675 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 3/48 (6%) Query: 74 QKW---YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++W YY+ D P D YD RL L+ PEL D P VG Sbjct: 17 KRWALEYYQQDAPSVPDADYDAAFRRLHELESAHPELASPDSPTRRVG 64 >gi|15616692|ref|NP_239904.1| DNA ligase (NAD+) [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11132251|sp|P57172|DNLJ_BUCAI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|25294009|pir||F84937 DNA ligase (NAD) (EC 6.5.1.2) [imported] - Buchnera sp. (strain APS) gi|10038755|dbj|BAB12790.1| DNA ligase (NAD+) [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 675 Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 31/57 (54%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L KI L ++ +Y+ L+ + +D YD + +L L+ + EL D P VG Sbjct: 7 KIEKLRKILLKYEYFYHTLNQSIISDAEYDYLFRQLYELELKNKELIPSDSPTQKVG 63 >gi|311086964|gb|ADP67044.1| DNA ligase (NAD+) [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 678 Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 31/57 (54%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L KI L ++ +Y+ L+ + +D YD + +L L+ + EL D P VG Sbjct: 7 KIEKLRKILLKYEYFYHTLNQSIISDAEYDYLFRQLYELELKNKELIPSDSPTQKVG 63 >gi|219682005|ref|YP_002468389.1| DNA ligase (NAD+) [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254781272|sp|B8D6X9|DNLJ_BUCAT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219621738|gb|ACL29894.1| DNA ligase (NAD+) [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311085811|gb|ADP65893.1| DNA ligase (NAD+) [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086384|gb|ADP66465.1| DNA ligase (NAD+) [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 676 Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 31/57 (54%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L KI L ++ +Y+ L+ + +D YD + +L L+ + EL D P VG Sbjct: 7 KIEKLRKILLKYEYFYHTLNQSIISDAEYDYLFRQLYELELKNKELIPSDSPTQKVG 63 >gi|15893019|ref|NP_360733.1| NAD-dependent DNA ligase LigA [Rickettsia conorii str. Malish 7] gi|81527939|sp|Q92GM7|DNLJ_RICCN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|15620219|gb|AAL03634.1| DNA ligase [Rickettsia conorii str. Malish 7] Length = 689 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Query: 54 LSKGEAMIEVEYLV-KIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +S+ EA +E L KIA ++ +Y D+PL +D YD++ L+++FP L E+ Sbjct: 7 ISEEEAQKLLEELADKIAAYNHAYYIE-DNPLVSDSEYDQLFNTNLKLEQKFPHLILENS 65 Query: 113 PWNTVG 118 P VG Sbjct: 66 PSKKVG 71 >gi|34581289|ref|ZP_00142769.1| DNA ligase [Rickettsia sibirica 246] gi|28262674|gb|EAA26178.1| DNA ligase [Rickettsia sibirica 246] Length = 689 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Query: 54 LSKGEAMIEVEYLV-KIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +S+ EA +E L KIA ++ +Y D+PL +D YD++ L+++FP L E+ Sbjct: 7 ISEEEAQKLLEELADKIAAYNHAYYIE-DNPLVSDSEYDQLFNTNLKLEQKFPHLILENS 65 Query: 113 PWNTVG 118 P VG Sbjct: 66 PSKKVG 71 >gi|188584367|ref|YP_001927812.1| DNA ligase, NAD-dependent [Methylobacterium populi BJ001] gi|254781367|sp|B1Z9P1|DNLJ_METPB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|179347865|gb|ACB83277.1| DNA ligase, NAD-dependent [Methylobacterium populi BJ001] Length = 814 Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 27/57 (47%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 V SLS+ A L + YY D P TD YD + + L+A++ +FP L Sbjct: 10 VESLSEDAAQARHAELSRAIERANHLYYNEDAPELTDAEYDALRQELEAIEARFPAL 66 >gi|229587074|ref|YP_002845575.1| NAD-dependent DNA ligase LigA [Rickettsia africae ESF-5] gi|254781406|sp|C3PLJ2|DNLJ_RICAE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|228022124|gb|ACP53832.1| DNA ligase, NAD-dependent [Rickettsia africae ESF-5] Length = 689 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Query: 54 LSKGEAMIEVEYLV-KIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +S+ EA +E L KIA ++ +Y D+PL +D YD++ L+++FP L E+ Sbjct: 7 ISEEEAQKLLEELADKIAAYNHAYYIE-DNPLVSDSEYDQLFNTNLKLEQKFPHLILENS 65 Query: 113 PWNTVG 118 P VG Sbjct: 66 PSKKVG 71 >gi|171914081|ref|ZP_02929551.1| DNA ligase, NAD-dependent [Verrucomicrobium spinosum DSM 4136] Length = 669 Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + V +L + HH + YY+ P +D +D + L L++ P L D P VG Sbjct: 10 ASLRVAHLREEIEHHNRLYYQNAAPEISDQAFDALLRELQDLEKAHPSLITPDSPTQRVG 69 >gi|312898543|ref|ZP_07757933.1| DNA ligase, NAD-dependent [Megasphaera micronuciformis F0359] gi|310620462|gb|EFQ04032.1| DNA ligase, NAD-dependent [Megasphaera micronuciformis F0359] Length = 672 Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 21/43 (48%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 YY LD P TD YD + L+ ++ PE D P VG+ Sbjct: 24 YYTLDKPTITDYDYDMLYRELETIEGAHPEWVTADSPTQRVGH 66 >gi|238650378|ref|YP_002916230.1| NAD-dependent DNA ligase LigA [Rickettsia peacockii str. Rustic] gi|257096313|sp|C4K0T1|DNLJ_RICPU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|238624476|gb|ACR47182.1| NAD-dependent DNA ligase LigA [Rickettsia peacockii str. Rustic] Length = 689 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Query: 54 LSKGEAMIEVEYLV-KIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +S+ EA +E L KIA ++ +Y D+PL +D YD++ L+++FP L E+ Sbjct: 7 ISEEEAQKLLEELADKIAAYNHAYYIE-DNPLVSDSEYDQLFNTNLKLEQKFPHLILENS 65 Query: 113 PWNTVG 118 P VG Sbjct: 66 PSKKVG 71 >gi|83312957|ref|YP_423221.1| NAD-dependent DNA ligase [Magnetospirillum magneticum AMB-1] gi|123726860|sp|Q2W0G3|DNLJ_MAGMM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|82947798|dbj|BAE52662.1| NAD-dependent DNA ligase [Magnetospirillum magneticum AMB-1] Length = 698 Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 V +L+ EA IE LV+ + Y+ D P D +YD RL ++ +FPEL Sbjct: 4 VEALTPFEARIEHAELVETIARWDEAYHAKDAPEVPDDVYDGAKRRLARIEGRFPEL 60 >gi|307289585|ref|ZP_07569529.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0109] gi|306499399|gb|EFM68772.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0109] gi|315164584|gb|EFU08601.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX1302] Length = 676 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YDR+ + L ++ +FP+L D P VG Sbjct: 29 YYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVG 70 >gi|256617609|ref|ZP_05474455.1| NAD-dependent DNA ligase [Enterococcus faecalis ATCC 4200] gi|257089149|ref|ZP_05583510.1| NAD-dependent DNA ligase [Enterococcus faecalis CH188] gi|312904259|ref|ZP_07763421.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0635] gi|256597136|gb|EEU16312.1| NAD-dependent DNA ligase [Enterococcus faecalis ATCC 4200] gi|256997961|gb|EEU84481.1| NAD-dependent DNA ligase [Enterococcus faecalis CH188] gi|310632355|gb|EFQ15638.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0635] gi|315578805|gb|EFU90996.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0630] Length = 676 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YDR+ + L ++ +FP+L D P VG Sbjct: 29 YYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVG 70 >gi|193213809|ref|YP_001995008.1| NAD-dependentDNA ligase [Chloroherpeton thalassium ATCC 35110] gi|254781288|sp|B3QSH0|DNLJ_CHLT3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|193087286|gb|ACF12561.1| DNA ligase, NAD-dependent [Chloroherpeton thalassium ATCC 35110] Length = 684 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++K EA ++ L + H YY L P +D +D + L L+ ++P+L D P Sbjct: 1 MNKSEAEAKIRALRREINEHNYNYYNLAKPKISDYDFDALLRTLAELEAKYPDLVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|94676849|ref|YP_588544.1| DNA ligase, NAD-dependent [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123260587|sp|Q1LU20|DNLJ_BAUCH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|94219999|gb|ABF14158.1| DNA ligase, NAD-dependent [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 671 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 64 EYLVKIALHHQKW---YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 +Y+ ++ + W YY D P +D YD + +L L+ Q+P+L D P +GY Sbjct: 6 QYIEQLRQQLRYWNFLYYAKDAPEVSDVEYDWLMMKLRELERQWPDLKTADSPTQHIGY 64 >gi|315161924|gb|EFU05941.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0645] Length = 676 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YDR+ + L ++ +FP+L D P VG Sbjct: 29 YYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVG 70 >gi|256957407|ref|ZP_05561578.1| NAD-dependent DNA ligase [Enterococcus faecalis DS5] gi|257077597|ref|ZP_05571958.1| NAD-dependent DNA ligase [Enterococcus faecalis JH1] gi|294779927|ref|ZP_06745308.1| DNA ligase (NAD(+)) [Enterococcus faecalis PC1.1] gi|256947903|gb|EEU64535.1| NAD-dependent DNA ligase [Enterococcus faecalis DS5] gi|256985627|gb|EEU72929.1| NAD-dependent DNA ligase [Enterococcus faecalis JH1] gi|294452976|gb|EFG21397.1| DNA ligase (NAD(+)) [Enterococcus faecalis PC1.1] gi|295114065|emb|CBL32702.1| DNA ligase, NAD-dependent [Enterococcus sp. 7L76] gi|315036101|gb|EFT48033.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0027] gi|315172192|gb|EFU16209.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX1346] Length = 676 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YDR+ + L ++ +FP+L D P VG Sbjct: 29 YYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVG 70 >gi|255971181|ref|ZP_05421767.1| NAD-dependent DNA ligase [Enterococcus faecalis T1] gi|255962199|gb|EET94675.1| NAD-dependent DNA ligase [Enterococcus faecalis T1] Length = 676 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YDR+ + L ++ +FP+L D P VG Sbjct: 29 YYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVG 70 >gi|300861866|ref|ZP_07107946.1| DNA ligase (NAD(+)) [Enterococcus faecalis TUSoD Ef11] gi|300848391|gb|EFK76148.1| DNA ligase (NAD(+)) [Enterococcus faecalis TUSoD Ef11] Length = 676 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YDR+ + L ++ +FP+L D P VG Sbjct: 29 YYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVG 70 >gi|229546559|ref|ZP_04435284.1| NAD-dependent DNA ligase [Enterococcus faecalis TX1322] gi|256854411|ref|ZP_05559775.1| DNA ligase [Enterococcus faecalis T8] gi|307274689|ref|ZP_07555861.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX2134] gi|307296388|ref|ZP_07576212.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0411] gi|229308304|gb|EEN74291.1| NAD-dependent DNA ligase [Enterococcus faecalis TX1322] gi|256709971|gb|EEU25015.1| DNA ligase [Enterococcus faecalis T8] gi|306496043|gb|EFM65628.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0411] gi|306508618|gb|EFM77716.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX2134] gi|315029103|gb|EFT41035.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX4000] gi|315157732|gb|EFU01749.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0312] gi|323479918|gb|ADX79357.1| DNA ligase, NAD-dependent [Enterococcus faecalis 62] Length = 676 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YDR+ + L ++ +FP+L D P VG Sbjct: 29 YYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVG 70 >gi|153956080|ref|YP_001396845.1| DNA ligase [Clostridium kluyveri DSM 555] gi|146348938|gb|EDK35474.1| DNA ligase [Clostridium kluyveri DSM 555] Length = 60 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D+ TD YD++S +L L++++PE +D P VG Sbjct: 16 YYNKDESEITDHEYDKLSLKLRKLEKEYPEYARKDSPTQKVG 57 >gi|71892277|ref|YP_278011.1| DNA ligase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|123747814|sp|Q492G5|DNLJ_BLOPB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|71796383|gb|AAZ41134.1| DNA ligase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 595 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K H + YY ++ +D YD + E+L+ L++ +P L E P +G Sbjct: 7 KIQKLRKKLRHWEYLYYTKNESAVSDEKYDAMLEKLNQLEQIYPHLIAESSPTQRIG 63 >gi|29375318|ref|NP_814472.1| DNA ligase, NAD-dependent [Enterococcus faecalis V583] gi|227554838|ref|ZP_03984885.1| DNA ligase, NAD-dependent [Enterococcus faecalis HH22] gi|256761492|ref|ZP_05502072.1| NAD-dependent DNA ligase [Enterococcus faecalis T3] gi|257415292|ref|ZP_05592286.1| NAD-dependent DNA ligase [Enterococcus faecalis AR01/DG] gi|257418334|ref|ZP_05595328.1| NAD-dependent DNA ligase [Enterococcus faecalis T11] gi|81437298|sp|Q837V6|DNLJ_ENTFA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|29342778|gb|AAO80542.1| DNA ligase, NAD-dependent [Enterococcus faecalis V583] gi|227176007|gb|EEI56979.1| DNA ligase, NAD-dependent [Enterococcus faecalis HH22] gi|256682743|gb|EEU22438.1| NAD-dependent DNA ligase [Enterococcus faecalis T3] gi|257157120|gb|EEU87080.1| NAD-dependent DNA ligase [Enterococcus faecalis ARO1/DG] gi|257160162|gb|EEU90122.1| NAD-dependent DNA ligase [Enterococcus faecalis T11] gi|315031451|gb|EFT43383.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0017] gi|315166929|gb|EFU10946.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX1341] gi|315575350|gb|EFU87541.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0309B] gi|315581380|gb|EFU93571.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0309A] Length = 676 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YDR+ + L ++ +FP+L D P VG Sbjct: 29 YYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVG 70 >gi|330879787|gb|EGH13936.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. glycinea str. race 4] Length = 347 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 18 HNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|312900318|ref|ZP_07759629.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0470] gi|311292506|gb|EFQ71062.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0470] Length = 676 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YDR+ + L ++ +FP+L D P VG Sbjct: 29 YYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVG 70 >gi|307269776|ref|ZP_07551106.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX4248] gi|306513886|gb|EFM82488.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX4248] Length = 676 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YDR+ + L ++ +FP+L D P VG Sbjct: 29 YYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVG 70 >gi|271501855|ref|YP_003334881.1| DNA ligase [Dickeya dadantii Ech586] gi|270345410|gb|ACZ78175.1| DNA ligase, NAD-dependent [Dickeya dadantii Ech586] Length = 683 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 26/57 (45%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +VE L +H+ Y+ D P D YD + L L++ PEL D P VG Sbjct: 18 QVEALRAQLRYHEYKYHVEDAPEIPDAEYDTLMNTLKVLEQAHPELVTPDSPTQRVG 74 >gi|255973805|ref|ZP_05424391.1| NAD-dependent DNA ligase [Enterococcus faecalis T2] gi|256964440|ref|ZP_05568611.1| NAD-dependent DNA ligase [Enterococcus faecalis HIP11704] gi|257080988|ref|ZP_05575349.1| NAD-dependent DNA ligase [Enterococcus faecalis E1Sol] gi|307272536|ref|ZP_07553789.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0855] gi|307284516|ref|ZP_07564678.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0860] gi|255966677|gb|EET97299.1| NAD-dependent DNA ligase [Enterococcus faecalis T2] gi|256954936|gb|EEU71568.1| NAD-dependent DNA ligase [Enterococcus faecalis HIP11704] gi|256989018|gb|EEU76320.1| NAD-dependent DNA ligase [Enterococcus faecalis E1Sol] gi|306503193|gb|EFM72447.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0860] gi|306510821|gb|EFM79838.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0855] gi|315151576|gb|EFT95592.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0012] gi|315170712|gb|EFU14729.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX1342] gi|327534312|gb|AEA93146.1| NAD-dependent DNA ligase LigA [Enterococcus faecalis OG1RF] Length = 676 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YDR+ + L ++ +FP+L D P VG Sbjct: 29 YYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVG 70 >gi|227517688|ref|ZP_03947737.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0104] gi|257083650|ref|ZP_05578011.1| NAD-dependent DNA ligase [Enterococcus faecalis Fly1] gi|227074843|gb|EEI12806.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0104] gi|256991680|gb|EEU78982.1| NAD-dependent DNA ligase [Enterococcus faecalis Fly1] gi|315146961|gb|EFT90977.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX4244] Length = 676 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YDR+ + L ++ +FP+L D P VG Sbjct: 29 YYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVG 70 >gi|327475237|gb|AEA77213.1| DNA ligase [Bacillus aquimaris] Length = 668 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD P D YD++ L L++QFP+L D P VG Sbjct: 24 YHVLDKPSVPDSEYDQLLRELIELEDQFPDLKTSDSPSERVG 65 >gi|322411466|gb|EFY02374.1| NAD-dependent DNA ligase LigA [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 652 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ YY D P +D YD++ L L+ Q+PE +D P VG Sbjct: 14 RYRQEYYTNDSPSVSDSEYDKLYRELVELENQYPEHVLQDSPTQNVG 60 >gi|315145225|gb|EFT89241.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX2141] Length = 676 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YDR+ + L ++ +FP+L D P VG Sbjct: 29 YYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVG 70 >gi|257086082|ref|ZP_05580443.1| NAD-dependent DNA ligase [Enterococcus faecalis D6] gi|256994112|gb|EEU81414.1| NAD-dependent DNA ligase [Enterococcus faecalis D6] gi|315025779|gb|EFT37711.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX2137] Length = 676 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YDR+ + L ++ +FP+L D P VG Sbjct: 29 YYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVG 70 >gi|120434999|ref|YP_860685.1| DNA ligase [Gramella forsetii KT0803] gi|166215777|sp|A0LZ23|DNLJ_GRAFK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|117577149|emb|CAL65618.1| DNA ligase [Gramella forsetii KT0803] Length = 664 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 25/47 (53%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P +D +D + L L+E++PE D++ P VG Sbjct: 16 QHNYNYYVLDKPQISDYEFDIKLKELQELEEKYPEFEDDNSPTRRVG 62 >gi|329576880|gb|EGG58365.1| DNA ligase [Enterococcus faecalis TX1467] Length = 676 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YDR+ + L ++ +FP+L D P VG Sbjct: 29 YYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVG 70 >gi|125973550|ref|YP_001037460.1| DNA ligase, NAD-dependent [Clostridium thermocellum ATCC 27405] gi|256003369|ref|ZP_05428360.1| DNA ligase, NAD-dependent [Clostridium thermocellum DSM 2360] gi|281417755|ref|ZP_06248775.1| DNA ligase, NAD-dependent [Clostridium thermocellum JW20] gi|166215580|sp|A3DE88|DNLJ_CLOTH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|125713775|gb|ABN52267.1| DNA ligase, NAD-dependent [Clostridium thermocellum ATCC 27405] gi|255992659|gb|EEU02750.1| DNA ligase, NAD-dependent [Clostridium thermocellum DSM 2360] gi|281409157|gb|EFB39415.1| DNA ligase, NAD-dependent [Clostridium thermocellum JW20] gi|316940208|gb|ADU74242.1| DNA ligase, NAD-dependent [Clostridium thermocellum DSM 1313] Length = 663 Score = 34.7 bits (78), Expect = 4.6, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L +I +H YY D P +D YD + L+ L+++ P+L D P +G Sbjct: 10 LREILNYHSHKYYVEDAPEISDFEYDELYRELEKLEQERPDLITPDSPTQRIG 62 >gi|268319976|ref|YP_003293632.1| DNA ligase, NAD-dependent [Lactobacillus johnsonii FI9785] gi|262398351|emb|CAX67365.1| DNA ligase, NAD-dependent [Lactobacillus johnsonii FI9785] Length = 668 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%) Query: 75 KW---YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 KW YY D P+ D +YD+ + L L+++FP+L D VG Sbjct: 22 KWADDYYAKDAPVVEDAVYDKTYQELVELEQKFPDLVTADSITQRVG 68 >gi|253996456|ref|YP_003048520.1| DNA ligase, NAD-dependent [Methylotenera mobilis JLW8] gi|253983135|gb|ACT47993.1| DNA ligase, NAD-dependent [Methylotenera mobilis JLW8] Length = 677 Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 20/41 (48%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY LD P D YD++ L L++ +P L D P V Sbjct: 27 YYVLDAPSVPDSEYDKIYRELQTLEQAYPSLVVADSPTQRV 67 >gi|227889453|ref|ZP_04007258.1| NAD-dependent DNA ligase [Lactobacillus johnsonii ATCC 33200] gi|227849931|gb|EEJ60017.1| NAD-dependent DNA ligase [Lactobacillus johnsonii ATCC 33200] Length = 668 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%) Query: 75 KW---YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 KW YY D P+ D +YD+ + L L+++FP+L D VG Sbjct: 22 KWADDYYAKDAPVVEDAVYDKTYQELVELEQKFPDLVTADSITQRVG 68 >gi|329116783|ref|ZP_08245500.1| DNA ligase (NAD+) [Streptococcus parauberis NCFD 2020] gi|326907188|gb|EGE54102.1| DNA ligase (NAD+) [Streptococcus parauberis NCFD 2020] Length = 654 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P +D YDR+ L L+E++PE +D P VG Sbjct: 19 YYTNDSPSVSDQDYDRLYHELVQLEEEYPEYALKDSPTQAVG 60 >gi|255283571|ref|ZP_05348126.1| DNA ligase, NAD-dependent [Bryantella formatexigens DSM 14469] gi|255265833|gb|EET59038.1| DNA ligase, NAD-dependent [Bryantella formatexigens DSM 14469] Length = 667 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 H+ YY L+ P TD YDR+ + L AL+++ + P TVGY Sbjct: 18 HRNAYYNLNAPTITDQEYDRLYDELAALEKETGVILSYS-PTQTVGY 63 >gi|22537014|ref|NP_687865.1| NAD-dependent DNA ligase LigA [Streptococcus agalactiae 2603V/R] gi|81454504|sp|Q8E084|DNLJ_STRA5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|22533870|gb|AAM99737.1|AE014230_17 DNA ligase, NAD-dependent [Streptococcus agalactiae 2603V/R] Length = 652 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 28/53 (52%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + K YY D+P +D YD++ L L++Q PE + P + VG Sbjct: 8 LVSLLNQYAKEYYTQDNPTVSDSQYDQLYRELVELEKQHPENILPNSPTHRVG 60 >gi|254564006|ref|YP_003071101.1| DNA ligase [Methylobacterium extorquens DM4] gi|254271284|emb|CAX27296.1| DNA ligase, NAD(+)-dependent [Methylobacterium extorquens DM4] Length = 814 Score = 34.7 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 V +LS+ A L + + YY D P TD YD + + L+A++ +FP L Sbjct: 10 VEALSEDAAQARHAELSRAIERANQLYYNEDAPELTDAEYDALRQELEAIEARFPAL 66 >gi|76787534|ref|YP_329595.1| NAD-dependent DNA ligase LigA [Streptococcus agalactiae A909] gi|123771969|sp|Q3K1K8|DNLJ_STRA1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|76562591|gb|ABA45175.1| DNA ligase, NAD-dependent [Streptococcus agalactiae A909] Length = 652 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 28/53 (52%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + K YY D+P +D YD++ L L++Q PE + P + VG Sbjct: 8 LVSLLNQYAKEYYTQDNPTVSDSQYDQLYRELVELEKQHPENILPNSPTHRVG 60 >gi|212212963|ref|YP_002303899.1| NAD-dependent DNA ligase [Coxiella burnetii CbuG_Q212] gi|254781302|sp|B6J1C6|DNLJ_COXB2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|212011373|gb|ACJ18754.1| NAD-dependent DNA ligase [Coxiella burnetii CbuG_Q212] Length = 677 Score = 34.7 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 21/46 (45%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY L P D +YD + L L++++PE P VG Sbjct: 24 HNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQRVG 69 >gi|229917963|ref|YP_002886609.1| DNA ligase, NAD-dependent [Exiguobacterium sp. AT1b] gi|229469392|gb|ACQ71164.1| DNA ligase, NAD-dependent [Exiguobacterium sp. AT1b] Length = 664 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L ++ +PEL D P VG Sbjct: 21 YYVLDRPSVPDSEYDRLMNELIQIETDYPELRTPDSPTQRVG 62 >gi|187251632|ref|YP_001876114.1| DNA ligase, NAD-dependent [Elusimicrobium minutum Pei191] gi|254781329|sp|B2KE31|DNLJ_ELUMP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|186971792|gb|ACC98777.1| DNA ligase, NAD-dependent [Elusimicrobium minutum Pei191] Length = 656 Score = 34.7 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 26/57 (45%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+E L +H YY LD+ +D YD + RL L+ P+ D P +G Sbjct: 7 EIEDLRSKINYHNNLYYNLDNAEISDAEYDGLYARLKFLEAMNPDYADAASPTQKIG 63 >gi|209364099|ref|YP_001424866.2| NAD-dependent DNA ligase [Coxiella burnetii Dugway 5J108-111] gi|207082032|gb|ABS76887.2| NAD-dependent DNA ligase [Coxiella burnetii Dugway 5J108-111] Length = 673 Score = 34.7 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 21/46 (45%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY L P D +YD + L L++++PE P VG Sbjct: 24 HNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQRVG 69 >gi|322385709|ref|ZP_08059353.1| NAD-dependent DNA ligase LigA [Streptococcus cristatus ATCC 51100] gi|321270447|gb|EFX53363.1| NAD-dependent DNA ligase LigA [Streptococcus cristatus ATCC 51100] Length = 652 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LVK+ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 8 LVKLLNRYAHEYYTADRPSVSDSEYDRLYRELVELEEKYPTDILPDSPTHRVG 60 >gi|269794376|ref|YP_003313831.1| DNA ligase, NAD-dependent [Sanguibacter keddieii DSM 10542] gi|269096561|gb|ACZ20997.1| DNA ligase, NAD-dependent [Sanguibacter keddieii DSM 10542] Length = 871 Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 22/46 (47%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HQ YY D P +D YD + L ++E P+L D P VG Sbjct: 58 HQFAYYVRDAPTVSDAEYDTLLRELGDIEEAHPQLRTPDSPTQRVG 103 >gi|323342976|ref|ZP_08083207.1| NAD-dependent DNA ligase LigA [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463040|gb|EFY08235.1| NAD-dependent DNA ligase LigA [Erysipelothrix rhusiopathiae ATCC 19414] Length = 659 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 71 LHHQKW-YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LH + Y+ +D P D YD++ L+ L+ + PE FD + P VG Sbjct: 13 LHQYNYEYHVMDQPTIADVEYDQLLRELNELEVKHPEFFDINSPTQKVG 61 >gi|148925946|ref|ZP_01809633.1| DNA ligase [Campylobacter jejuni subsp. jejuni CG8486] gi|145844932|gb|EDK22036.1| DNA ligase [Campylobacter jejuni subsp. jejuni CG8486] Length = 647 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 64 EYLVKIALHH--QKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL K+AL + + YY D+PL +D YD + L +EQ + +D P + Sbjct: 5 EYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELSVFEEQNKDEISKDSPTQKIA 61 >gi|212218835|ref|YP_002305622.1| NAD-dependent DNA ligase [Coxiella burnetii CbuK_Q154] gi|254781301|sp|B6J878|DNLJ_COXB1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|212013097|gb|ACJ20477.1| NAD-dependent DNA ligase [Coxiella burnetii CbuK_Q154] Length = 673 Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 21/46 (45%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY L P D +YD + L L++++PE P VG Sbjct: 24 HNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQRVG 69 >gi|320008426|gb|ADW03276.1| DNA ligase, NAD-dependent [Streptomyces flavogriseus ATCC 33331] Length = 731 Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H+ YY D P+ D +DR L+A++ + PEL D P V Sbjct: 31 HRFRYYVKDQPVVDDAEFDRQMRALEAIEHEHPELRTPDSPTQKVA 76 >gi|86153540|ref|ZP_01071744.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843266|gb|EAQ60477.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni HB93-13] Length = 647 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 64 EYLVKIALHH--QKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL K+AL + + YY D+PL +D YD + L +EQ + +D P + Sbjct: 5 EYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELSVFEEQNKDEISKDSPTQKIA 61 >gi|325278944|ref|YP_004251486.1| DNA ligase [Odoribacter splanchnicus DSM 20712] gi|324310753|gb|ADY31306.1| DNA ligase [Odoribacter splanchnicus DSM 20712] Length = 829 Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 27/47 (57%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY + P +D +D + L+ L+E++PE++D + P VG Sbjct: 17 YHNYKYYIENAPEISDREFDGLMHDLEKLEEKYPEMYDPNSPTQRVG 63 >gi|218532981|ref|YP_002423797.1| DNA ligase, NAD-dependent [Methylobacterium chloromethanicum CM4] gi|254781363|sp|B7KU78|DNLJ_METC4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218525284|gb|ACK85869.1| DNA ligase, NAD-dependent [Methylobacterium chloromethanicum CM4] Length = 814 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 V +LS+ A L + + YY D P TD YD + + L+A++ +FP L Sbjct: 10 VEALSEDAAQARHAELSRAIERANQLYYNEDAPELTDAEYDALRQELEAIEARFPAL 66 >gi|190359248|sp|A9KCS0|DNLJ_COXBN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 670 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 21/46 (45%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY L P D +YD + L L++++PE P VG Sbjct: 21 HNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQRVG 66 >gi|315641089|ref|ZP_07896168.1| NAD-dependent DNA ligase LigA [Enterococcus italicus DSM 15952] gi|315483097|gb|EFU73614.1| NAD-dependent DNA ligase LigA [Enterococcus italicus DSM 15952] Length = 671 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P+ D YD++ ++L AL+ PE D P VG Sbjct: 23 YYVKDQPVVDDAYYDQLYQQLVALETAHPEYQTSDSPTQRVG 64 >gi|240141492|ref|YP_002965972.1| DNA ligase, NAD(+)-dependent [Methylobacterium extorquens AM1] gi|240011469|gb|ACS42695.1| DNA ligase, NAD(+)-dependent [Methylobacterium extorquens AM1] Length = 814 Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 V +LS+ A L + + YY D P TD YD + + L+A++ +FP L Sbjct: 10 VEALSEDAAQARHAELSRAIERANQLYYNEDAPELTDAEYDALRQELEAIEARFPAL 66 >gi|76798177|ref|ZP_00780429.1| DNA ligase, NAD-dependent [Streptococcus agalactiae 18RS21] gi|77405561|ref|ZP_00782652.1| DNA ligase, NAD-dependent [Streptococcus agalactiae H36B] gi|77410701|ref|ZP_00787060.1| DNA ligase, NAD-dependent [Streptococcus agalactiae CJB111] gi|76586485|gb|EAO62991.1| DNA ligase, NAD-dependent [Streptococcus agalactiae 18RS21] gi|77163237|gb|EAO74189.1| DNA ligase, NAD-dependent [Streptococcus agalactiae CJB111] gi|77175868|gb|EAO78646.1| DNA ligase, NAD-dependent [Streptococcus agalactiae H36B] Length = 648 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 28/53 (52%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + K YY D+P +D YD++ L L++Q PE + P + VG Sbjct: 4 LVSLLNQYAKEYYTQDNPTVSDSQYDQLYRELVELEKQHPENILPNSPTHRVG 56 >gi|260433791|ref|ZP_05787762.1| DNA ligase, NAD-dependent [Silicibacter lacuscaerulensis ITI-1157] gi|260417619|gb|EEX10878.1| DNA ligase, NAD-dependent [Silicibacter lacuscaerulensis ITI-1157] Length = 708 Score = 34.3 bits (77), Expect = 5.4, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 31/68 (45%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ +A E+ L L + Y+ D P +D YD + R ++ +FP L Sbjct: 7 VQELTEDQAKEELARLASALLRANELYHGQDAPEISDAEYDALKRRNLEIEARFPHLKRP 66 Query: 111 DHPWNTVG 118 D P VG Sbjct: 67 DSPTEQVG 74 >gi|300361107|ref|ZP_07057284.1| NAD-dependent DNA ligase LigA [Lactobacillus gasseri JV-V03] gi|300353726|gb|EFJ69597.1| NAD-dependent DNA ligase LigA [Lactobacillus gasseri JV-V03] Length = 668 Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust. Identities = 15/42 (35%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P+ D +YD+ + L L+++FP+L D VG Sbjct: 27 YYAKDAPIVEDAVYDKAYQELVELEKRFPDLVTSDSITQRVG 68 >gi|146277206|ref|YP_001167365.1| DNA ligase, NAD-dependent [Rhodobacter sphaeroides ATCC 17025] gi|166216230|sp|A4WRP6|DNLJ_RHOS5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145555447|gb|ABP70060.1| DNA ligase, NAD-dependent [Rhodobacter sphaeroides ATCC 17025] Length = 704 Score = 34.3 bits (77), Expect = 5.4, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ D P +D YD + R A++E+FP L D P VG Sbjct: 33 YHTHDAPRISDADYDALKRRNRAIEERFPALRRSDSPSERVG 74 >gi|163854038|ref|YP_001642081.1| DNA ligase, NAD-dependent [Methylobacterium extorquens PA1] gi|254781364|sp|A9VWA4|DNLJ_METEP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|163665643|gb|ABY33010.1| DNA ligase, NAD-dependent [Methylobacterium extorquens PA1] Length = 814 Score = 34.3 bits (77), Expect = 5.4, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 V +LS+ A L + + YY D P TD YD + + L+A++ +FP L Sbjct: 10 VEALSEDAAQARHAELSRAIERANQLYYNEDAPELTDAEYDALRQELEAIEARFPAL 66 >gi|89069525|ref|ZP_01156869.1| DNA ligase, NAD-dependent [Oceanicola granulosus HTCC2516] gi|89044860|gb|EAR50950.1| DNA ligase, NAD-dependent [Oceanicola granulosus HTCC2516] Length = 739 Score = 34.3 bits (77), Expect = 5.4, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 19/36 (52%) Query: 83 PLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 P+ D YD + R AL+ +FPEL D P VG Sbjct: 30 PIMDDAAYDALKRRNAALEARFPELMRADSPTGQVG 65 >gi|294340191|emb|CAZ88563.1| DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) [Thiomonas sp. 3As] Length = 686 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD PL D YD + L ++ PEL D P VG Sbjct: 28 YYVLDAPLAPDADYDALFRELQQIEADHPELRTPDSPTQRVG 69 >gi|296135970|ref|YP_003643212.1| DNA ligase, NAD-dependent [Thiomonas intermedia K12] gi|295796092|gb|ADG30882.1| DNA ligase, NAD-dependent [Thiomonas intermedia K12] Length = 688 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD PL D YD + L ++ PEL D P VG Sbjct: 28 YYVLDAPLAPDADYDALFRELQQIEADHPELRTPDSPTQRVG 69 >gi|262199205|ref|YP_003270414.1| DNA ligase, NAD-dependent [Haliangium ochraceum DSM 14365] gi|262082552|gb|ACY18521.1| DNA ligase, NAD-dependent [Haliangium ochraceum DSM 14365] Length = 751 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S A E LV H + YY +P+ +D YD++ ++L A++E+ P E P Sbjct: 1 MSDDTARAEYLGLVDELSDHDRRYYVEAEPIISDVEYDKLLKKLRAIEEEHPAWVVEWSP 60 Query: 114 WNTVGY 119 VG+ Sbjct: 61 TQRVGH 66 >gi|222055066|ref|YP_002537428.1| DNA ligase, NAD-dependent [Geobacter sp. FRC-32] gi|254781339|sp|B9M861|DNLJ_GEOSF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|221564355|gb|ACM20327.1| DNA ligase, NAD-dependent [Geobacter sp. FRC-32] Length = 669 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + A + ++ L + H YY D P TD YD + L L+++FP+L D P Sbjct: 1 MDRTAAQLRIQELHREINRHNYLYYVEDRPEITDAEYDLLLRELQQLEKEFPDLVTADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|83951899|ref|ZP_00960631.1| DNA ligase, NAD-dependent [Roseovarius nubinhibens ISM] gi|83836905|gb|EAP76202.1| DNA ligase, NAD-dependent [Roseovarius nubinhibens ISM] Length = 748 Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ D P +D YD + +R ++ +FPEL +D P VG Sbjct: 33 YHGADAPEISDAEYDALKQRNAEIEARFPELKRDDSPSEQVG 74 >gi|325288902|ref|YP_004265083.1| DNA ligase [Syntrophobotulus glycolicus DSM 8271] gi|324964303|gb|ADY55082.1| DNA ligase [Syntrophobotulus glycolicus DSM 8271] Length = 671 Score = 34.3 bits (77), Expect = 5.6, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LDDP TD YD + L ++ PE D P VG Sbjct: 29 YYVLDDPQITDKEYDLLMRELVEIEGAHPEWVSPDSPSQRVG 70 >gi|193216704|ref|YP_001999946.1| DNA ligase [Mycoplasma arthritidis 158L3-1] gi|254781372|sp|B3PMJ0|DNLJ_MYCA5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|193002027|gb|ACF07242.1| DNA ligase [Mycoplasma arthritidis 158L3-1] Length = 665 Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 22/40 (55%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 YY LD PL D +YDR +L L+EQ+ F + N+ Sbjct: 25 YYNLDAPLVEDAIYDREILKLKKLEEQYSSYFSFEELANS 64 >gi|123774771|sp|Q47SC6|DNLJ_THEFY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|71914739|gb|AAZ54641.1| NAD-dependent DNA ligase [Thermobifida fusca YX] Length = 745 Score = 34.3 bits (77), Expect = 5.6, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 22/43 (51%) Query: 76 WYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + Y L P+ +D YD++ L L+ Q+P L D P VG Sbjct: 46 YRYYLGSPIISDAEYDQLMAELRDLEAQYPSLVTPDSPTQKVG 88 >gi|165923886|ref|ZP_02219718.1| DNA ligase, NAD-dependent [Coxiella burnetii RSA 334] gi|165916671|gb|EDR35275.1| DNA ligase, NAD-dependent [Coxiella burnetii RSA 334] Length = 670 Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust. Identities = 15/46 (32%), Positives = 21/46 (45%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY L P D +YD + L L++++PE P VG Sbjct: 21 HNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQRVG 66 >gi|283954134|ref|ZP_06371659.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni 414] gi|283794413|gb|EFC33157.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni 414] Length = 647 Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 64 EYLVKIALHHQ--KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL K+AL + + YY D+PL +D YD + L A +EQ + +D P + Sbjct: 5 EYLEKVALANSWMRAYYEKDEPLASDEEYDALIRELRAFEEQNKDEILKDSPTQKIA 61 >gi|163841673|ref|YP_001626078.1| NAD-dependent DNA ligase [Renibacterium salmoninarum ATCC 33209] gi|190359277|sp|A9WTZ3|DNLJ_RENSM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|162955149|gb|ABY24664.1| NAD-dependent DNA ligase [Renibacterium salmoninarum ATCC 33209] Length = 758 Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E LV+ H++ YY + L +D +D + RL+ ++ PEL D P VG Sbjct: 35 EYSKLVEDIRHYRFAYYNEAESLVSDAEFDVLFRRLEEIEALHPELISNDSPTQEVG 91 >gi|161723110|ref|YP_288664.2| NAD-dependent DNA ligase LigA [Thermobifida fusca YX] Length = 731 Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 22/43 (51%) Query: 76 WYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + Y L P+ +D YD++ L L+ Q+P L D P VG Sbjct: 32 YRYYLGSPIISDAEYDQLMAELRDLEAQYPSLVTPDSPTQKVG 74 >gi|126737638|ref|ZP_01753368.1| DNA ligase, NAD-dependent [Roseobacter sp. SK209-2-6] gi|126721031|gb|EBA17735.1| DNA ligase, NAD-dependent [Roseobacter sp. SK209-2-6] Length = 749 Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 30/59 (50%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 K ++ LS+ EA E+ L + + ++ D +DG YDR RL L + FP+L Sbjct: 3 KPISDLSENEAQEELNELKLLIWSADRLHHTHDISEISDGAYDREKRRLKELVDTFPKL 61 >gi|251782129|ref|YP_002996431.1| NAD-dependent DNA ligase LigA [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390758|dbj|BAH81217.1| NAD-dependent DNA ligase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 652 Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 29/56 (51%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L ++ +++ YY D P +D YD++ L L+ Q+PE +D P VG Sbjct: 5 IRELTELLNRYRQEYYTNDSPSVSDSEYDKLYRELVDLENQYPEHVLQDSPTQNVG 60 >gi|163802586|ref|ZP_02196478.1| NAD-dependent DNA ligase LigA [Vibrio sp. AND4] gi|159173669|gb|EDP58488.1| NAD-dependent DNA ligase LigA [Vibrio sp. AND4] Length = 670 Score = 34.3 bits (77), Expect = 5.9, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 58 EAMIEVEYLVKIALH-HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E++++ +K +LH H YY D+P D YDR+ L ++ + P+L D P Sbjct: 3 ESVLQQLEELKESLHYHAVRYYVEDNPEIPDAEYDRMMRELLDIEAEHPDLVTVDSPSQR 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|153207803|ref|ZP_01946403.1| DNA ligase, NAD-dependent [Coxiella burnetii 'MSU Goat Q177'] gi|120576355|gb|EAX32979.1| DNA ligase, NAD-dependent [Coxiella burnetii 'MSU Goat Q177'] Length = 670 Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust. Identities = 15/46 (32%), Positives = 21/46 (45%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY L P D +YD + L L++++PE P VG Sbjct: 21 HNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQRVG 66 >gi|309777086|ref|ZP_07672052.1| DNA ligase, NAD-dependent [Erysipelotrichaceae bacterium 3_1_53] gi|308915156|gb|EFP60930.1| DNA ligase, NAD-dependent [Erysipelotrichaceae bacterium 3_1_53] Length = 665 Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 24/42 (57%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P +D YDR + L AL+E++P+ D + VG Sbjct: 20 YYVLDQPSMSDQEYDRYYQELVALEEKYPQYRDPNSITQRVG 61 >gi|323126984|gb|ADX24281.1| NAD-dependent DNA ligase LigA [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 652 Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 29/56 (51%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L ++ +++ YY D P +D YD++ L L+ Q+PE +D P VG Sbjct: 5 IRELTELLNRYRQEYYTNDSPSVSDSEYDKLYRELVDLENQYPEHVLQDSPTQNVG 60 >gi|254445017|ref|ZP_05058493.1| DNA ligase, NAD-dependent [Verrucomicrobiae bacterium DG1235] gi|198259325|gb|EDY83633.1| DNA ligase, NAD-dependent [Verrucomicrobiae bacterium DG1235] Length = 668 Score = 34.3 bits (77), Expect = 6.1, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK + +E L H + YYR +P +D YD + L L+ PEL E P Sbjct: 1 MSKASDLKRIEQLRAEIRRHDELYYRNAEPEISDFDYDGLKRELADLEAANPELPMEASP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQAVG 65 >gi|291288208|ref|YP_003505024.1| DNA ligase, NAD-dependent [Denitrovibrio acetiphilus DSM 12809] gi|290885368|gb|ADD69068.1| DNA ligase, NAD-dependent [Denitrovibrio acetiphilus DSM 12809] Length = 652 Score = 34.3 bits (77), Expect = 6.1, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ K YY DDP+ D YD++ L ++ + P + D P VG Sbjct: 12 YYSKKYYVEDDPVVADAEYDKLYNELLRIEAEDPSIISHDSPSQRVG 58 >gi|323490410|ref|ZP_08095622.1| DNA ligase [Planococcus donghaensis MPA1U2] gi|323395909|gb|EGA88743.1| DNA ligase [Planococcus donghaensis MPA1U2] Length = 668 Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D +YD++ L L+ +P+L D P VG Sbjct: 24 YYVLDKPAVPDAIYDQLLNELIDLETLYPDLVFPDSPTQRVG 65 >gi|7674018|sp|Q9ZFY8|DNLJ_THESK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|4235370|gb|AAD13188.1| NAD-dependent DNA ligase [Thermus sp. AK16D] Length = 674 Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EA V L + +H YY LD P +D YDR+ L L+E+FPEL D P V Sbjct: 5 EARRRVNELRDLIRYHNYLYYVLDAPEISDAEYDRLLRELKELEERFPELKSPDSPTEQV 64 Query: 118 G 118 G Sbjct: 65 G 65 >gi|56966057|pdb|1TA8|A Chain A, Structural Rearrangement Accompanying Nad+ Synthesis Within A Bacterial Dna Ligase Crystal Length = 332 Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YDR+ + L ++ +FP+L D P VG Sbjct: 29 YYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVG 70 >gi|228904740|ref|ZP_04068794.1| DNA ligase [Bacillus thuringiensis IBL 4222] gi|228854754|gb|EEM99358.1| DNA ligase [Bacillus thuringiensis IBL 4222] Length = 656 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY +D P+ +D YDR+ + L ++E PE P N VG Sbjct: 20 HH---YYTMDKPIASDAEYDRLYDELVKIEELHPEWTVAHSPSNRVG 63 >gi|77409440|ref|ZP_00786135.1| DNA ligase, NAD-dependent [Streptococcus agalactiae COH1] gi|77171952|gb|EAO75126.1| DNA ligase, NAD-dependent [Streptococcus agalactiae COH1] Length = 643 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 24/44 (54%) Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 K YY D+P +D YD++ L L+EQ PE + P + VG Sbjct: 8 KEYYTQDNPTVSDSQYDQLYRELVELEEQHPENILPNSPTHRVG 51 >gi|269792802|ref|YP_003317706.1| DNA-directed RNA polymerase, beta subunit [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100437|gb|ACZ19424.1| DNA-directed RNA polymerase, beta subunit [Thermanaerovibrio acidaminovorans DSM 6589] Length = 1201 Score = 34.3 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 10/56 (17%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLD-DPLFTDGLYDRVSERLDALQEQFPELF 108 L K + +IE+ LV++ H +W+++ D DP F RL LQE F E+F Sbjct: 15 LGKQKDLIELPDLVEVQRHSYEWFFQADEDPNF---------RRLQGLQELFKEVF 61 >gi|189219712|ref|YP_001940353.1| NAD-dependent DNA ligase [Methylacidiphilum infernorum V4] gi|254781365|sp|B3DWU2|DNLJ_METI4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|189186570|gb|ACD83755.1| NAD-dependent DNA ligase [Methylacidiphilum infernorum V4] Length = 689 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 33/72 (45%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 KA + SL E + LVK+ + YY PL +D YD + L+ L++ PE Sbjct: 18 KAPSLDSLGYEEIKKRHDELVKLIRKYDYAYYVEAHPLVSDQEYDNLYHELETLEKLHPE 77 Query: 107 LFDEDHPWNTVG 118 L D P +G Sbjct: 78 LITPDSPTQRIG 89 >gi|119356312|ref|YP_910956.1| DNA ligase, NAD-dependent [Chlorobium phaeobacteroides DSM 266] gi|166215573|sp|A1BDQ5|DNLJ_CHLPD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|119353661|gb|ABL64532.1| DNA ligase, NAD-dependent [Chlorobium phaeobacteroides DSM 266] Length = 676 Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY P +D +DR+ ERL L++ FP+ D P + VG Sbjct: 20 RHNTLYYVDARPEISDYEFDRLMERLIELEKAFPDFVTPDSPSHRVG 66 >gi|325288193|ref|YP_004263983.1| DNA ligase [Cellulophaga lytica DSM 7489] gi|324323647|gb|ADY31112.1| DNA ligase [Cellulophaga lytica DSM 7489] Length = 664 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 24/46 (52%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P +D +D + L AL+ + PE +D + P VG Sbjct: 17 HNHNYYVLDTPTISDYDFDIKLKELQALEAKHPEFYDANSPTLRVG 62 >gi|58336856|ref|YP_193441.1| DNA ligase [Lactobacillus acidophilus NCFM] gi|227903415|ref|ZP_04021220.1| DNA ligase [Lactobacillus acidophilus ATCC 4796] gi|75357942|sp|Q5FLL4|DNLJ_LACAC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|58254173|gb|AAV42410.1| DNA ligase [Lactobacillus acidophilus NCFM] gi|227868891|gb|EEJ76312.1| DNA ligase [Lactobacillus acidophilus ATCC 4796] Length = 668 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 17/77 (22%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKW---YYRLDDPLFTDGLYDRVSERLDALQ 101 LD+AKK SL + + KW YY D P D +YD+ RL L+ Sbjct: 6 LDEAKKEASLLRNQL--------------DKWADAYYSKDAPEVEDNVYDQKYSRLLELE 51 Query: 102 EQFPELFDEDHPWNTVG 118 +QFPE+ D VG Sbjct: 52 KQFPEIVTPDSITQRVG 68 >gi|225858927|ref|YP_002740437.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae 70585] gi|254781425|sp|C1C7B1|DNLJ_STRP7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|225720821|gb|ACO16675.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae 70585] Length = 652 Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 8 LVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|56966058|pdb|1TAE|A Chain A, Structural Rearrangement Accompanying Nad+ Synthesis Within A Bacterial Dna Ligase Crystal gi|56966059|pdb|1TAE|B Chain B, Structural Rearrangement Accompanying Nad+ Synthesis Within A Bacterial Dna Ligase Crystal gi|56966060|pdb|1TAE|C Chain C, Structural Rearrangement Accompanying Nad+ Synthesis Within A Bacterial Dna Ligase Crystal gi|56966061|pdb|1TAE|D Chain D, Structural Rearrangement Accompanying Nad+ Synthesis Within A Bacterial Dna Ligase Crystal gi|212374930|pdb|3BA8|A Chain A, Structural Basis For The Inhibition Of Bacterial Nad+ Dependent Dna Ligase gi|212374931|pdb|3BA9|A Chain A, Structural Basis For Inhbition Of Nad-Dependent Ligase gi|212374932|pdb|3BAA|A Chain A, Structural Basis For The Inhibition Of Bacterial Nad+ Dependent Dna Ligase gi|212374933|pdb|3BAB|A Chain A, Structural Basis For The Inhibition Of Bacterial Nad+ Dependent Dna Ligase Length = 332 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YDR+ + L ++ +FP+L D P VG Sbjct: 29 YYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSPTQRVG 70 >gi|307067701|ref|YP_003876667.1| NAD-dependent DNA ligase (contains BRCT domain type II) [Streptococcus pneumoniae AP200] gi|306409238|gb|ADM84665.1| NAD-dependent DNA ligase (contains BRCT domain type II) [Streptococcus pneumoniae AP200] Length = 648 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 4 LVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 56 >gi|168486469|ref|ZP_02710977.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae CDC1087-00] gi|183570508|gb|EDT91036.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae CDC1087-00] Length = 652 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 8 LVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|149024919|ref|ZP_01836320.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP23-BS72] gi|303259779|ref|ZP_07345754.1| DNA ligase [Streptococcus pneumoniae SP-BS293] gi|303262954|ref|ZP_07348889.1| DNA ligase [Streptococcus pneumoniae SP14-BS292] gi|303264916|ref|ZP_07350832.1| DNA ligase [Streptococcus pneumoniae BS397] gi|303266897|ref|ZP_07352775.1| DNA ligase [Streptococcus pneumoniae BS457] gi|303268933|ref|ZP_07354718.1| DNA ligase [Streptococcus pneumoniae BS458] gi|147929542|gb|EDK80536.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP23-BS72] gi|301794230|emb|CBW36650.1| DNA ligase [Streptococcus pneumoniae INV104] gi|302635931|gb|EFL66431.1| DNA ligase [Streptococcus pneumoniae SP14-BS292] gi|302638984|gb|EFL69444.1| DNA ligase [Streptococcus pneumoniae SP-BS293] gi|302641551|gb|EFL71913.1| DNA ligase [Streptococcus pneumoniae BS458] gi|302643595|gb|EFL73864.1| DNA ligase [Streptococcus pneumoniae BS457] gi|302645604|gb|EFL75835.1| DNA ligase [Streptococcus pneumoniae BS397] Length = 652 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 8 LVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|305431677|ref|ZP_07400846.1| NAD-dependent DNA ligase LigA [Campylobacter coli JV20] gi|304445272|gb|EFM37916.1| NAD-dependent DNA ligase LigA [Campylobacter coli JV20] Length = 647 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Query: 60 MIEVEYLVKIALHHQ--KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 M + EYL K+AL + YY D+PL +D YD + L +EQ + +D P + Sbjct: 1 MTKKEYLEKVALAASWMRAYYEKDEPLASDEEYDALIRELRVFEEQNKDEISKDSPTQKI 60 Query: 118 G 118 Sbjct: 61 A 61 >gi|148986045|ref|ZP_01819066.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP3-BS71] gi|147921879|gb|EDK73005.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP3-BS71] gi|301800082|emb|CBW32679.1| DNA ligase [Streptococcus pneumoniae OXC141] Length = 652 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 8 LVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|111658008|ref|ZP_01408712.1| hypothetical protein SpneT_02000805 [Streptococcus pneumoniae TIGR4] Length = 648 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 4 LVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 56 >gi|15900984|ref|NP_345588.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae TIGR4] gi|81531953|sp|Q97QT2|DNLJ_STRPN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|14972593|gb|AAK75228.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae TIGR4] Length = 652 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 8 LVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|148994566|ref|ZP_01823725.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP9-BS68] gi|168488962|ref|ZP_02713161.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP195] gi|147927160|gb|EDK78197.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP9-BS68] gi|183572496|gb|EDT93024.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP195] gi|332073479|gb|EGI83958.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae GA17570] Length = 652 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 8 LVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|149003762|ref|ZP_01828594.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP14-BS69] gi|237650785|ref|ZP_04525037.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae CCRI 1974] gi|237822373|ref|ZP_04598218.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae CCRI 1974M2] gi|147758208|gb|EDK65210.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP14-BS69] Length = 652 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 8 LVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|148998387|ref|ZP_01825829.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP11-BS70] gi|168576158|ref|ZP_02722052.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae MLV-016] gi|194398076|ref|YP_002037745.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae G54] gi|225861080|ref|YP_002742589.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae Taiwan19F-14] gi|298230922|ref|ZP_06964603.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254162|ref|ZP_06977748.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502866|ref|YP_003724806.1| DNA ligase (NAD(+)) [Streptococcus pneumoniae TCH8431/19A] gi|254781424|sp|B5E4M9|DNLJ_STRP4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781433|sp|C1CRL7|DNLJ_STRZT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|147755784|gb|EDK62829.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP11-BS70] gi|183577935|gb|EDT98463.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae MLV-016] gi|194357743|gb|ACF56191.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae G54] gi|225727034|gb|ACO22885.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae Taiwan19F-14] gi|298238461|gb|ADI69592.1| DNA ligase (NAD(+)) [Streptococcus pneumoniae TCH8431/19A] gi|327389325|gb|EGE87670.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae GA04375] gi|332075071|gb|EGI85542.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae GA17545] Length = 652 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 8 LVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|46199040|ref|YP_004707.1| NAD-dependent DNA ligase [Thermus thermophilus HB27] gi|81405933|sp|Q72JN8|DNLJ_THET2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|46196664|gb|AAS81080.1| NAD-dependent DNA ligase [Thermus thermophilus HB27] Length = 676 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EA V L + +H YY L DP +D YDR+ L L+E+FPEL D P V Sbjct: 5 EARKRVNELRDLIRYHNYRYYVLADPEISDAEYDRLLRELKELEERFPELKSPDSPTEQV 64 Query: 118 G 118 G Sbjct: 65 G 65 >gi|169834268|ref|YP_001694538.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae Hungary19A-6] gi|254781426|sp|B1IBQ3|DNLJ_STRPI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|168996770|gb|ACA37382.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae Hungary19A-6] Length = 652 Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 8 LVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|149012887|ref|ZP_01833800.1| DNA ligase [Streptococcus pneumoniae SP19-BS75] gi|182684133|ref|YP_001835880.1| DNA ligase [Streptococcus pneumoniae CGSP14] gi|254781428|sp|B2IPZ1|DNLJ_STRPS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|147763176|gb|EDK70116.1| DNA ligase [Streptococcus pneumoniae SP19-BS75] gi|182629467|gb|ACB90415.1| DNA ligase [Streptococcus pneumoniae CGSP14] gi|301801994|emb|CBW34723.1| DNA ligase [Streptococcus pneumoniae INV200] Length = 652 Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 8 LVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|325570045|ref|ZP_08145970.1| NAD-dependent DNA ligase LigA [Enterococcus casseliflavus ATCC 12755] gi|325156873|gb|EGC69044.1| NAD-dependent DNA ligase LigA [Enterococcus casseliflavus ATCC 12755] Length = 687 Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D LYD++ L ++ +P+L ED P VG Sbjct: 37 YYVKDQPSVEDYLYDQLYAELVEIETNYPQLVTEDSPTQRVG 78 >gi|242010879|ref|XP_002426185.1| heat shock protein 70 HSP70 interacting protein, putative [Pediculus humanus corporis] gi|212510236|gb|EEB13447.1| heat shock protein 70 HSP70 interacting protein, putative [Pediculus humanus corporis] Length = 944 Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 31/119 (26%) Query: 9 RSSKFENEHNITPAQWK----KLLTLEAK----FLPNKRALESWLDKAKK---------- 50 R +N NI +W LTL+A+ + +KRAL++ L+ AK Sbjct: 520 RRYLIDNSKNIDSRRWAAEGLSYLTLDAEVKEILIEDKRALQALLELAKSGEQMVVYGVV 579 Query: 51 ------VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQ 103 V + K E + E+ L K A HH + DDP D V++R++ L ++ Sbjct: 580 TTFVNLVNAYEKQEILPEMVELAKFAKHHIPQEHEFDDP-------DFVTKRVEILAKE 631 >gi|149006206|ref|ZP_01829918.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP18-BS74] gi|225856757|ref|YP_002738268.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae P1031] gi|307127352|ref|YP_003879383.1| NAD-dependent DNA ligase [Streptococcus pneumoniae 670-6B] gi|254781432|sp|C1CKI0|DNLJ_STRZP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|147761983|gb|EDK68945.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP18-BS74] gi|225725530|gb|ACO21382.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae P1031] gi|306484414|gb|ADM91283.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae 670-6B] gi|332075451|gb|EGI85920.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae GA41301] Length = 652 Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 8 LVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|15903068|ref|NP_358618.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae R6] gi|116516470|ref|YP_816476.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae D39] gi|81449679|sp|Q8DPS9|DNLJ_STRR6 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|122278638|sp|Q04KH2|DNLJ_STRP2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|15458641|gb|AAK99828.1| DNA ligase [Streptococcus pneumoniae R6] gi|116077046|gb|ABJ54766.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae D39] Length = 652 Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 8 LVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|260584784|ref|ZP_05852529.1| DNA ligase, NAD-dependent [Granulicatella elegans ATCC 700633] gi|260157441|gb|EEW92512.1| DNA ligase, NAD-dependent [Granulicatella elegans ATCC 700633] Length = 668 Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P TD YD L L+ ++P+L D P VG Sbjct: 23 YYVQDRPTVTDHEYDETYHELVRLETEYPQLVTSDSPTQRVG 64 >gi|194016164|ref|ZP_03054779.1| DNA ligase, NAD-dependent [Bacillus pumilus ATCC 7061] gi|194012519|gb|EDW22086.1| DNA ligase, NAD-dependent [Bacillus pumilus ATCC 7061] Length = 668 Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A +E L +I + Y+ LD P D YD L +L+E+ P+L D P Sbjct: 1 MDKEAAKRRIEELHQILNQYNYEYHTLDRPSVPDAEYDARMRELISLEEEHPDLKAADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|257865964|ref|ZP_05645617.1| DNA ligase [Enterococcus casseliflavus EC30] gi|257872297|ref|ZP_05651950.1| DNA ligase [Enterococcus casseliflavus EC10] gi|257799898|gb|EEV28950.1| DNA ligase [Enterococcus casseliflavus EC30] gi|257806461|gb|EEV35283.1| DNA ligase [Enterococcus casseliflavus EC10] Length = 676 Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D LYD++ L ++ +P+L ED P VG Sbjct: 26 YYVKDQPSVEDYLYDQLYAELVEIETNYPQLVTEDSPTQRVG 67 >gi|171779630|ref|ZP_02920586.1| hypothetical protein STRINF_01467 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281732|gb|EDT47166.1| hypothetical protein STRINF_01467 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 652 Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++K YY D P +D YD++ L L++ P+L D P VG Sbjct: 14 QYRKEYYTQDQPTVSDSEYDKLYRELVELEKANPDLILPDSPTQAVG 60 >gi|257875591|ref|ZP_05655244.1| DNA ligase [Enterococcus casseliflavus EC20] gi|257809757|gb|EEV38577.1| DNA ligase [Enterococcus casseliflavus EC20] Length = 676 Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 22/42 (52%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D LYD++ L ++ +P+L ED P VG Sbjct: 26 YYVKDQPSVEDYLYDQLYAELVEIETNYPQLVTEDSPTQRVG 67 >gi|154499783|ref|ZP_02037821.1| hypothetical protein BACCAP_03440 [Bacteroides capillosus ATCC 29799] gi|150271381|gb|EDM98638.1| hypothetical protein BACCAP_03440 [Bacteroides capillosus ATCC 29799] Length = 673 Score = 33.9 bits (76), Expect = 7.4, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 YY L+ P +D +YDR+ E L L E + + P NTVGY Sbjct: 23 YYNLNSPSVSDAVYDRLFEELQEL-ESATGVQMSNSPTNTVGY 64 >gi|57168176|ref|ZP_00367315.1| DNA ligase (NAD) Cj0586 [Campylobacter coli RM2228] gi|57020550|gb|EAL57219.1| DNA ligase (NAD) Cj0586 [Campylobacter coli RM2228] Length = 467 Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Query: 60 MIEVEYLVKIALHHQ--KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 M + EYL K+AL + YY D+PL +D YD + L +EQ + +D P + Sbjct: 1 MTKKEYLEKVALAASWMRAYYEKDEPLASDEEYDALIRELRVFEEQNKDEISKDSPTQKI 60 Query: 118 G 118 Sbjct: 61 A 61 >gi|225022751|ref|ZP_03711943.1| hypothetical protein CORMATOL_02796 [Corynebacterium matruchotii ATCC 33806] gi|224944472|gb|EEG25681.1| hypothetical protein CORMATOL_02796 [Corynebacterium matruchotii ATCC 33806] Length = 699 Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E + L H++ YY P TD +D + ++L+AL+ PEL D P VG Sbjct: 17 EWQRLASEVTRHRELYYN-QTPEITDAEFDALFKKLEALEADHPELATPDSPTQQVG 72 >gi|322368190|ref|ZP_08042759.1| NAD-dependent DNA ligase LigA [Haladaptatus paucihalophilus DX253] gi|320552206|gb|EFW93851.1| NAD-dependent DNA ligase LigA [Haladaptatus paucihalophilus DX253] Length = 685 Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V + + A + E L + HH YY +DP D YD + RL L+E F ++ Sbjct: 22 VAEMDEAGASEQAELLREAIRHHDYRYYVENDPRIGDRTYDALFTRLQELEEAF-DVQTP 80 Query: 111 DHPWNTVG 118 D P VG Sbjct: 81 DSPTRRVG 88 >gi|305682056|ref|ZP_07404860.1| DNA ligase (NAD+) [Corynebacterium matruchotii ATCC 14266] gi|305658529|gb|EFM48032.1| DNA ligase (NAD+) [Corynebacterium matruchotii ATCC 14266] Length = 715 Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E + L H++ YY P TD +D + ++L+AL+ PEL D P VG Sbjct: 24 EWQRLASEVTRHRELYYN-QTPEITDAEFDALFKKLEALEADHPELATPDSPTQQVG 79 >gi|281490961|ref|YP_003352941.1| NAD-dependent DNA ligase [Lactococcus lactis subsp. lactis KF147] gi|281374719|gb|ADA64239.1| NAD-dependent DNA ligase [Lactococcus lactis subsp. lactis KF147] Length = 654 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+P D YDR+ + L L+ + P+L D P + G Sbjct: 21 YYTLDEPSVEDSEYDRLYQELVKLEAENPQLTRADSPTHRTG 62 >gi|297538570|ref|YP_003674339.1| DNA ligase, NAD-dependent [Methylotenera sp. 301] gi|297257917|gb|ADI29762.1| DNA ligase, NAD-dependent [Methylotenera sp. 301] Length = 682 Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 27/65 (41%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 SL + + + L ++ + YY LD P D YD V L ++ Q P L D Sbjct: 13 SLGQPNLALRCQQLRQLIAQYDHEYYVLDAPSVPDSEYDLVYRDLQDIERQHPNLITPDS 72 Query: 113 PWNTV 117 P V Sbjct: 73 PTQRV 77 >gi|257467825|ref|ZP_05631921.1| NAD-dependent DNA ligase [Fusobacterium ulcerans ATCC 49185] Length = 688 Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 29/56 (51%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L L + ++YY ++ L +D YD + L L+E++PE E P VG Sbjct: 21 IEKLRADLLKYNQYYYTNNESLISDVEYDMLMNELKELEEKYPEYKSEASPTVIVG 76 >gi|148989161|ref|ZP_01820551.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae SP6-BS73] gi|147925384|gb|EDK76462.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae SP6-BS73] Length = 374 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 4 LVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 56 >gi|15672401|ref|NP_266575.1| NAD-dependent DNA ligase LigA [Lactococcus lactis subsp. lactis Il1403] gi|81538437|sp|Q9CIE4|DNLJ_LACLA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|12723294|gb|AAK04517.1|AE006278_8 DNA ligase [Lactococcus lactis subsp. lactis Il1403] gi|326405996|gb|ADZ63067.1| NAD-dependent DNA ligase [Lactococcus lactis subsp. lactis CV56] Length = 654 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+P D YDR+ + L L+ + P+L D P + G Sbjct: 21 YYTLDEPSVEDSEYDRLYQELVKLEAENPQLTRADSPTHRTG 62 >gi|227540068|ref|ZP_03970117.1| DNA ligase (NAD(+)) [Sphingobacterium spiritivorum ATCC 33300] gi|227240084|gb|EEI90099.1| DNA ligase (NAD(+)) [Sphingobacterium spiritivorum ATCC 33300] Length = 673 Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H+ YY L L +D +D+ + L+AL+ Q+P+ D + P VG Sbjct: 19 HYNYQYYVLAQSLISDYDFDQKLKELEALESQYPQFADPNSPTRRVG 65 >gi|86149767|ref|ZP_01067996.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597007|ref|ZP_01100243.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni 84-25] gi|218562237|ref|YP_002344016.1| NAD-dependent DNA ligase LigA [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|122952953|sp|Q0PAT1|DNLJ_CAMJE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|85839585|gb|EAQ56845.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190696|gb|EAQ94669.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni 84-25] gi|112359943|emb|CAL34732.1| DNA ligase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925847|gb|ADC28199.1| NAD-dependent DNA ligase LigA [Campylobacter jejuni subsp. jejuni IA3902] gi|315927323|gb|EFV06667.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930607|gb|EFV09637.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni 305] Length = 647 Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 64 EYLVKIALHH--QKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL K+AL + + YY D+PL +D YD + L +EQ + +D P + Sbjct: 5 EYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELRVFEEQNKDEISKDSPTQKIA 61 >gi|283955998|ref|ZP_06373487.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni 1336] gi|283792474|gb|EFC31254.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni 1336] Length = 647 Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 64 EYLVKIALHH--QKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL K+AL + + YY D+PL +D YD + L +EQ + +D P + Sbjct: 5 EYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELRVFEEQNKDEISKDSPTQKIA 61 >gi|300771799|ref|ZP_07081670.1| NAD-dependent DNA ligase LigA [Sphingobacterium spiritivorum ATCC 33861] gi|300761185|gb|EFK58010.1| NAD-dependent DNA ligase LigA [Sphingobacterium spiritivorum ATCC 33861] Length = 673 Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 26/47 (55%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H+ YY L L +D +D+ + L+AL+ Q+P+ D + P VG Sbjct: 19 HYNYQYYVLAQSLISDYDFDQKLKELEALESQYPQFADPNSPTRRVG 65 >gi|134034096|sp|Q4UN15|DNLJ_RICFE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 689 Score = 33.9 bits (76), Expect = 8.0, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 68 KIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 KIA ++ YY D+PL +D YD++ L+++FP L E+ P +G Sbjct: 22 KIAAYNHA-YYIEDNPLVSDSEYDQLFNTNLKLEQKFPHLVLENSPSKKIG 71 >gi|57238218|ref|YP_178701.1| NAD-dependent DNA ligase LigA [Campylobacter jejuni RM1221] gi|81353856|sp|Q5HVI4|DNLJ_CAMJR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|57167022|gb|AAW35801.1| DNA ligase, NAD-dependent [Campylobacter jejuni RM1221] gi|315058000|gb|ADT72329.1| DNA ligase [Campylobacter jejuni subsp. jejuni S3] Length = 647 Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 64 EYLVKIALHH--QKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EYL K+AL + + YY D+PL +D YD + L +EQ + +D P + Sbjct: 5 EYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELRVFEEQNKDEISKDSPTQKIA 61 >gi|67458584|ref|YP_246208.1| NAD-dependent DNA ligase LigA [Rickettsia felis URRWXCal2] gi|67004117|gb|AAY61043.1| DNA ligase, NAD-dependent [Rickettsia felis URRWXCal2] Length = 706 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 68 KIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 KIA ++ +Y D+PL +D YD++ L+++FP L E+ P +G Sbjct: 39 KIAAYNHAYYIE-DNPLVSDSEYDQLFNTNLKLEQKFPHLVLENSPSKKIG 88 >gi|1352293|sp|P49422|DNLJ_THESC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|609276|emb|CAA82645.1| DNA ligase [Thermus scotoductus] gi|1093606|prf||2104272A DNA ligase Length = 674 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EA V L + +H YY L DP +D YDR+ L L+E+FPEL D P V Sbjct: 5 EARKRVNELRDLIRYHNYRYYVLADPEISDAEYDRLLRELKELEERFPELKSPDSPTEQV 64 Query: 118 G 118 G Sbjct: 65 G 65 >gi|146296740|ref|YP_001180511.1| DNA ligase, NAD-dependent [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166215569|sp|A4XK85|DNLJ_CALS8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145410316|gb|ABP67320.1| DNA ligase, NAD-dependent [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 673 Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + +H YY D+P +D YD + L L++Q+PE D P VG Sbjct: 12 LVDLINYHDYKYYVEDNPEISDYEYDMLYRELVELEKQYPEYIFPDSPTQRVG 64 >gi|157691416|ref|YP_001485878.1| NAD-dependent DNA ligase LigA [Bacillus pumilus SAFR-032] gi|190359234|sp|A8FAQ1|DNLJ_BACP2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157680174|gb|ABV61318.1| DNA ligase (NAD(+)) [Bacillus pumilus SAFR-032] Length = 668 Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A +E L +I + Y+ LD P D YD L +L+E+ P+L D P Sbjct: 1 MDKEAAKRRIEELHEILNQYNYEYHTLDRPSVPDAEYDARMRELISLEEEHPDLKAADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|255324552|ref|ZP_05365669.1| DNA ligase, NAD-dependent [Corynebacterium tuberculostearicum SK141] gi|255298458|gb|EET77758.1| DNA ligase, NAD-dependent [Corynebacterium tuberculostearicum SK141] Length = 689 Score = 33.9 bits (76), Expect = 8.4, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H+ YY +P D +D + +RL AL+E+ PEL D P VG Sbjct: 24 HRNLYYN-GEPAIPDADFDALFQRLLALEEEHPELAVPDSPTQQVG 68 >gi|311740579|ref|ZP_07714406.1| NAD-dependent DNA ligase LigA [Corynebacterium pseudogenitalium ATCC 33035] gi|311304099|gb|EFQ80175.1| NAD-dependent DNA ligase LigA [Corynebacterium pseudogenitalium ATCC 33035] Length = 689 Score = 33.5 bits (75), Expect = 8.6, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H+ YY +P D +D + +RL AL+E+ PEL D P VG Sbjct: 24 HRNLYYN-GEPAIPDADFDALFQRLLALEEEHPELAVPDSPTQQVG 68 >gi|303234054|ref|ZP_07320703.1| DNA ligase (NAD+) [Finegoldia magna BVS033A4] gi|302494979|gb|EFL54736.1| DNA ligase (NAD+) [Finegoldia magna BVS033A4] Length = 662 Score = 33.5 bits (75), Expect = 8.7, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++YLV I + YY LDDPL D YD + + L L+++ + + P N +G Sbjct: 7 IKYLVDILNKYAYHYYTLDDPLIADSEYDVLYDELVNLEKETGIVL-PNSPTNRIG 61 >gi|169824266|ref|YP_001691877.1| NAD-dependent DNA ligase LigA [Finegoldia magna ATCC 29328] gi|254781333|sp|B0RZW0|DNLJ_FINM2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|167831071|dbj|BAG07987.1| NAD-dependent DNA ligase [Finegoldia magna ATCC 29328] Length = 662 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++YLV I + YY LDDPL D YD + + L L+++ + + P N +G Sbjct: 7 IKYLVDILNKYAYHYYTLDDPLIADSEYDVLYDELVNLEKETGIVL-PNSPTNRIG 61 >gi|312135376|ref|YP_004002714.1| DNA ligase, nad-dependent [Caldicellulosiruptor owensensis OL] gi|311775427|gb|ADQ04914.1| DNA ligase, NAD-dependent [Caldicellulosiruptor owensensis OL] Length = 673 Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + +H YY D+P +D YD + L L++Q+PE D P VG Sbjct: 12 LVDLINYHDYKYYVEDNPEISDYEYDMLYRELVELEKQYPEYVLPDSPTQRVG 64 >gi|189485424|ref|YP_001956365.1| DNA ligase (NAD+) [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|254781446|sp|B1H072|DNLJ_UNCTG RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|170287383|dbj|BAG13904.1| DNA ligase (NAD+) [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 674 Score = 33.5 bits (75), Expect = 9.0, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 G ++YL K + H YY ++P +D YD +++ L+ ++++ P D P Sbjct: 4 GNIQNRIDYLRKELIRHNGLYYESNNPEISDSEYDNLAKELEQIEKENPLFALPDSP 60 >gi|188585101|ref|YP_001916646.1| DNA ligase, NAD-dependent [Natranaerobius thermophilus JW/NM-WN-LF] gi|254781378|sp|B2A5W5|DNLJ_NATTJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|179349788|gb|ACB84058.1| DNA ligase, NAD-dependent [Natranaerobius thermophilus JW/NM-WN-LF] Length = 663 Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 28/57 (49%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +VE L + +H YY LD P +D +D + L L++ +PE D P VG Sbjct: 8 KVEALREKIEYHNHRYYVLDAPEISDQEFDALMNELIELEQTYPEYQSPDSPSQRVG 64 >gi|313904335|ref|ZP_07837713.1| DNA ligase, NAD-dependent [Eubacterium cellulosolvens 6] gi|313470885|gb|EFR66209.1| DNA ligase, NAD-dependent [Eubacterium cellulosolvens 6] Length = 670 Score = 33.5 bits (75), Expect = 9.1, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY LD+P +D YD++ L +++ P+ D P +G Sbjct: 15 YHMDRYYNLDEPEISDYEYDQLMIALKKAEKEHPDWISPDSPSQKIG 61 >gi|325696052|gb|EGD37943.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK160] Length = 652 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV++ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 8 LVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEEKYPTDILPDSPTHRVG 60 >gi|325694926|gb|EGD36831.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK150] Length = 652 Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV++ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 8 LVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEEKYPTDILPDSPTHRVG 60 >gi|325687188|gb|EGD29210.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK72] Length = 652 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV++ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 8 LVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEEKYPTDILPDSPTHRVG 60 >gi|323351288|ref|ZP_08086944.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis VMC66] gi|322122512|gb|EFX94223.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis VMC66] Length = 652 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV++ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 8 LVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEEKYPTDILPDSPTHRVG 60 >gi|312878358|ref|ZP_07738269.1| DNA ligase (NAD(+)) [Caldicellulosiruptor lactoaceticus 6A] gi|311794859|gb|EFR11277.1| DNA ligase (NAD(+)) [Caldicellulosiruptor lactoaceticus 6A] Length = 259 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + +H YY D+P +D YD + L L++Q+PE D P VG Sbjct: 12 LVDLINYHDYKYYVEDNPEISDYEYDMLYRELVELEKQYPEYVFPDSPTQRVG 64 >gi|227893041|ref|ZP_04010846.1| DNA ligase [Lactobacillus ultunensis DSM 16047] gi|227865154|gb|EEJ72575.1| DNA ligase [Lactobacillus ultunensis DSM 16047] Length = 667 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P D +YD+ RL L+ QFPE+ D VG Sbjct: 27 YYSKDAPEVEDNVYDQSYNRLLELERQFPEIVTPDSITQRVG 68 >gi|125718295|ref|YP_001035428.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK36] gi|166216249|sp|A3CNX3|DNLJ_STRSV RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|125498212|gb|ABN44878.1| DNA ligase, putative [Streptococcus sanguinis SK36] Length = 652 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV++ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 8 LVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEEKYPTDILPDSPTHRVG 60 >gi|327489925|gb|EGF21714.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK1058] Length = 652 Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV++ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 8 LVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEEKYPTDILPDSPTHRVG 60 >gi|302871618|ref|YP_003840254.1| DNA ligase, NAD-dependent [Caldicellulosiruptor obsidiansis OB47] gi|302574477|gb|ADL42268.1| DNA ligase, NAD-dependent [Caldicellulosiruptor obsidiansis OB47] Length = 673 Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV + +H YY D+P +D YD + L L++Q+PE D P VG Sbjct: 12 LVDLINYHDYKYYVEDNPEISDYEYDMLYRELVELEKQYPEYVLPDSPTQRVG 64 >gi|327470726|gb|EGF16182.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK330] Length = 652 Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV++ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 8 LVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEEKYPTDILPDSPTHRVG 60 >gi|325690880|gb|EGD32881.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK115] Length = 652 Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV++ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 8 LVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEEKYPTDILPDSPTHRVG 60 Searching..................................................done Results from round 2 >gi|254781196|ref|YP_003065609.1| DNA ligase, NAD-dependent [Candidatus Liberibacter asiaticus str. psy62] gi|254040873|gb|ACT57669.1| DNA ligase, NAD-dependent [Candidatus Liberibacter asiaticus str. psy62] Length = 119 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 118/119 (99%), Positives = 119/119 (100%) Query: 1 MYNFDRVFRSSKFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAM 60 MYNFDRVFRSSKFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAM Sbjct: 1 MYNFDRVFRSSKFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAM 60 Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 IEVEYLVKIALHHQKWYYRLD+PLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY Sbjct: 61 IEVEYLVKIALHHQKWYYRLDNPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 >gi|254780131|ref|YP_003064544.1| DNA ligase, NAD-dependent [Candidatus Liberibacter asiaticus str. psy62] gi|254039808|gb|ACT56604.1| DNA ligase, NAD-dependent [Candidatus Liberibacter asiaticus str. psy62] gi|317120701|gb|ADV02524.1| DNA ligase [Liberibacter phage SC1] gi|317120744|gb|ADV02566.1| DNA ligase [Liberibacter phage SC2] gi|317120758|gb|ADV02579.1| DNA ligase [Liberibacter phage SC2] gi|317120805|gb|ADV02626.1| DNA ligase [Liberibacter phage SC1] gi|317120845|gb|ADV02666.1| DNA ligase [Candidatus Liberibacter asiaticus] Length = 119 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 119/119 (100%), Positives = 119/119 (100%) Query: 1 MYNFDRVFRSSKFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAM 60 MYNFDRVFRSSKFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAM Sbjct: 1 MYNFDRVFRSSKFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAM 60 Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY Sbjct: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 >gi|85708859|ref|ZP_01039925.1| DNA ligase [Erythrobacter sp. NAP1] gi|85690393|gb|EAQ30396.1| DNA ligase [Erythrobacter sp. NAP1] Length = 698 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 41/78 (52%) Query: 42 ESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQ 101 ES A V+ +S+ +A E+ L K HH + Y+ DDP +D YD + R L+ Sbjct: 5 ESAEVSANPVSQMSEADAANELMRLAKQIAHHDRLYHADDDPEISDQEYDALVRRNRELE 64 Query: 102 EQFPELFDEDHPWNTVGY 119 E FP+L ED P VG+ Sbjct: 65 EAFPQLVREDSPSKRVGH 82 >gi|13471538|ref|NP_103104.1| DNA ligase [Mesorhizobium loti MAFF303099] gi|75543387|sp|Q98KC4|DNLJ_RHILO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|14022280|dbj|BAB48890.1| DNA ligase [Mesorhizobium loti MAFF303099] Length = 734 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 38/70 (54%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K V SLS+ EA E++ L + H + Y+ D P TD YD + R A++E+FP L Sbjct: 4 KPVDSLSESEAEAELKRLAEEIAGHDRRYHAEDAPTITDAEYDALRRRNLAIEERFPGLV 63 Query: 109 DEDHPWNTVG 118 ED P VG Sbjct: 64 REDSPSRRVG 73 >gi|86358438|ref|YP_470330.1| NAD-dependent DNA ligase LigA [Rhizobium etli CFN 42] gi|123738303|sp|Q2K6D3|DNLJ_RHIEC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|86282540|gb|ABC91603.1| DNA ligase (NAD+) protein [Rhizobium etli CFN 42] Length = 718 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 37/68 (54%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L+ EA E+E L + HH Y+ D P +D YD + R DAL+ +FPEL E Sbjct: 8 VETLTIEEAAAELERLAREIAHHDALYHGKDQPEISDADYDALKRRNDALEARFPELIRE 67 Query: 111 DHPWNTVG 118 D P VG Sbjct: 68 DSPSRRVG 75 >gi|316933200|ref|YP_004108182.1| NAD-dependent DNA ligase [Rhodopseudomonas palustris DX-1] gi|315600914|gb|ADU43449.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris DX-1] Length = 715 Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 42/73 (57%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 + A + +L+K +A +E+ L + H K YY+ D P +D YD + RL+A++++FP Sbjct: 6 NPAPDIATLTKAKAKVELMRLRLVIEGHDKAYYQDDAPKISDADYDALRRRLEAIEQKFP 65 Query: 106 ELFDEDHPWNTVG 118 EL P TVG Sbjct: 66 ELVSASSPTQTVG 78 >gi|92116846|ref|YP_576575.1| DNA ligase, NAD-dependent [Nitrobacter hamburgensis X14] gi|123083742|sp|Q1QNT2|DNLJ_NITHX RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|91799740|gb|ABE62115.1| DNA ligase, NAD-dependent [Nitrobacter hamburgensis X14] Length = 714 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 40/72 (55%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 V SL++ +A IE + L H + YY+ D P +D YD + +RL+A++ +FP+ Sbjct: 7 TPPPVDSLTRAQAKIEHKRLALEIETHNERYYQKDAPTVSDAAYDALRQRLEAIEARFPD 66 Query: 107 LFDEDHPWNTVG 118 L + P TVG Sbjct: 67 LITANSPTQTVG 78 >gi|190892570|ref|YP_001979112.1| DNA ligase (NAD+) protein [Rhizobium etli CIAT 652] gi|254781398|sp|B3PTU7|DNLJ_RHIE6 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190697849|gb|ACE91934.1| DNA ligase (NAD+) protein [Rhizobium etli CIAT 652] Length = 718 Score = 119 bits (300), Expect = 8e-26, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 37/68 (54%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L+ EA E+E L K HH Y+ D P +D YD + R DAL+ +FPEL E Sbjct: 8 VDTLTIEEAAAELERLAKEIAHHDALYHGKDQPEISDADYDALKRRNDALEARFPELIRE 67 Query: 111 DHPWNTVG 118 D P VG Sbjct: 68 DSPSRHVG 75 >gi|260462100|ref|ZP_05810344.1| DNA ligase, NAD-dependent [Mesorhizobium opportunistum WSM2075] gi|259031960|gb|EEW33227.1| DNA ligase, NAD-dependent [Mesorhizobium opportunistum WSM2075] Length = 734 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 38/70 (54%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K V SLS+ EA E++ L + H + Y+ D P TD YD + R A++E+FP L Sbjct: 4 KPVDSLSESEAEAELQRLAEEIAEHDRRYHTEDAPTITDAEYDALRRRNLAIEERFPGLV 63 Query: 109 DEDHPWNTVG 118 ED P VG Sbjct: 64 REDSPSLRVG 73 >gi|241205543|ref|YP_002976639.1| NAD-dependent DNA ligase LigA [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859433|gb|ACS57100.1| DNA ligase, NAD-dependent [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 718 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 39/72 (54%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 ++ V +L+ EA E+E L K HH Y+ D P +D YD + R DAL+ +FPE Sbjct: 4 ESSAVDTLTIEEAAAELERLAKEIAHHDALYHGKDRPEISDADYDALKRRNDALEVRFPE 63 Query: 107 LFDEDHPWNTVG 118 L ED P VG Sbjct: 64 LIREDSPSRHVG 75 >gi|154252874|ref|YP_001413698.1| DNA ligase, NAD-dependent [Parvibaculum lavamentivorans DS-1] gi|190359267|sp|A7HVV8|DNLJ_PARL1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|154156824|gb|ABS64041.1| DNA ligase, NAD-dependent [Parvibaculum lavamentivorans DS-1] Length = 710 Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 38/71 (53%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 K V L+ EA E+E L H K YY+ D P +D YD + R +A++ ++PEL Sbjct: 14 QKDVDHLTLEEAPEELERLAAEIEKHDKLYYQKDAPRISDAEYDTLRRRNEAIEARYPEL 73 Query: 108 FDEDHPWNTVG 118 ED P + VG Sbjct: 74 VREDSPSHRVG 84 >gi|86749131|ref|YP_485627.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris HaA2] gi|123004307|sp|Q2IYJ4|DNLJ_RHOP2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|86572159|gb|ABD06716.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris HaA2] Length = 714 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 38/78 (48%) Query: 41 LESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 + A + +L+K +A +E L H YY+ D P +D YD + RL+A+ Sbjct: 1 MTKAPKPAPDIATLTKAKAKVEAMRLRLEIERHNSAYYQHDAPTVSDAEYDALRRRLEAI 60 Query: 101 QEQFPELFDEDHPWNTVG 118 + +FPEL P TVG Sbjct: 61 EAKFPELVSASSPTQTVG 78 >gi|209550159|ref|YP_002282076.1| NAD-dependent DNA ligase LigA [Rhizobium leguminosarum bv. trifolii WSM2304] gi|254781399|sp|B5ZWH9|DNLJ_RHILW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|209535915|gb|ACI55850.1| DNA ligase, NAD-dependent [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 718 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 30/68 (44%), Positives = 37/68 (54%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L+ EA E+E L K HH Y+ D P +D YD + R DAL+ QFPEL E Sbjct: 8 VDTLTIEEAAAELERLAKEIAHHDALYHGKDRPQISDADYDALKRRNDALEVQFPELIRE 67 Query: 111 DHPWNTVG 118 D P VG Sbjct: 68 DSPSRRVG 75 >gi|206895761|ref|YP_002246502.1| DNA ligase, NAD-dependent [Coprothermobacter proteolyticus DSM 5265] gi|254781298|sp|B5Y6V5|DNLJ_COPPD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|206738378|gb|ACI17456.1| DNA ligase, NAD-dependent [Coprothermobacter proteolyticus DSM 5265] Length = 666 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ EA +E L ++ +H YY LD P +D YD++ L L++QFPE D P Sbjct: 1 MTREEAKKRIERLRELIEYHNYRYYVLDSPEISDEEYDKLYRELVTLEKQFPEFITPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|327194610|gb|EGE61460.1| DNA ligase (NAD+) protein [Rhizobium etli CNPAF512] Length = 718 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 37/68 (54%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L+ EA E+E L K HH Y+ D P +D YD + R DAL+ +FPEL E Sbjct: 8 VDTLTIEEAAAELERLAKEIAHHDSLYHGKDQPEISDADYDALKRRNDALEVRFPELIRE 67 Query: 111 DHPWNTVG 118 D P VG Sbjct: 68 DSPSRHVG 75 >gi|192292401|ref|YP_001993006.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris TIE-1] gi|254781404|sp|B3QFL8|DNLJ_RHOPT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|192286150|gb|ACF02531.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris TIE-1] Length = 715 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 41/72 (56%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 A + +L+K +A +E+ L H K YY+ D P +D YD + RL+A++++FPE Sbjct: 7 PAPDIATLTKPKAKVELMRLRLEIEGHDKAYYQDDAPKISDADYDALRRRLEAIEQKFPE 66 Query: 107 LFDEDHPWNTVG 118 L + P TVG Sbjct: 67 LVNASSPTQTVG 78 >gi|166216284|sp|Q6N423|DNLJ_RHOPA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 715 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 41/72 (56%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 A + +L+K +A +E+ L H K YY+ D P +D YD + RL+A++++FPE Sbjct: 7 PAPDIATLTKPKAKVELMRLRLEIEGHDKAYYQDDAPKISDADYDALRRRLEAIEQKFPE 66 Query: 107 LFDEDHPWNTVG 118 L + P TVG Sbjct: 67 LVNASSPTQTVG 78 >gi|319782858|ref|YP_004142334.1| DNA ligase, NAD-dependent [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168746|gb|ADV12284.1| DNA ligase, NAD-dependent [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 734 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 40/70 (57%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K V SLS+ EA E++ L + H + Y+ D P+ TD YD ++ R A++E+FP L Sbjct: 4 KPVDSLSESEAEAELKRLAEEIAEHDRRYHTEDAPVITDAEYDALARRNLAIEERFPALV 63 Query: 109 DEDHPWNTVG 118 ED P VG Sbjct: 64 REDSPSLRVG 73 >gi|121533514|ref|ZP_01665342.1| DNA ligase, NAD-dependent [Thermosinus carboxydivorans Nor1] gi|121308073|gb|EAX48987.1| DNA ligase, NAD-dependent [Thermosinus carboxydivorans Nor1] Length = 673 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 32/64 (50%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + +A E E L + +H YY LD P +D +D + RL A++E +P L D P Sbjct: 8 TLEQAAREAEQLRRQIHYHNHRYYVLDAPEISDAEFDALMRRLIAIEEAYPSLITPDSPT 67 Query: 115 NTVG 118 VG Sbjct: 68 QRVG 71 >gi|114705256|ref|ZP_01438164.1| DNA ligase, NAD-dependent [Fulvimarina pelagi HTCC2506] gi|114540041|gb|EAU43161.1| DNA ligase, NAD-dependent [Fulvimarina pelagi HTCC2506] Length = 821 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 34/70 (48%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 V +L + EA E+E L + H + YY D P +D YD + R A++ +FP L Sbjct: 4 TPVENLDETEAASELERLAREIAEHDRAYYGDDAPTLSDADYDALRRRNTAIEARFPALI 63 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 64 RADSPSKRVG 73 >gi|153009084|ref|YP_001370299.1| NAD-dependent DNA ligase LigA [Ochrobactrum anthropi ATCC 49188] gi|166216221|sp|A6WZR6|DNLJ_OCHA4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|151560972|gb|ABS14470.1| DNA ligase, NAD-dependent [Ochrobactrum anthropi ATCC 49188] Length = 721 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 37/70 (52%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 V L++ EA+ E+E L + HH + Y+ D P +D YD + R DA++ +FP L Sbjct: 4 TPVEKLTEPEAVSELERLAREIAHHDELYHANDRPEISDAEYDALKRRNDAIEARFPHLV 63 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 64 RTDSPSLRVG 73 >gi|218678588|ref|ZP_03526485.1| NAD-dependent DNA ligase LigA [Rhizobium etli CIAT 894] Length = 264 Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 37/68 (54%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L+ EA E+E L K HH Y+ D P +D YD + R DAL+ +FPEL E Sbjct: 8 VDTLTIEEAAAELERLAKEIAHHDALYHGKDQPEISDADYDALKRRNDALEVRFPELIRE 67 Query: 111 DHPWNTVG 118 D P VG Sbjct: 68 DSPSRRVG 75 >gi|115524134|ref|YP_781045.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris BisA53] gi|115518081|gb|ABJ06065.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris BisA53] Length = 730 Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%) Query: 36 PNKR-------ALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDG 88 P R ++S V +L+K +A +E+ L H K YY+ D P +D Sbjct: 4 PAPRNDSRSVLQMKSKSKTVPDVATLTKAKAKVELMRLALEIERHDKAYYQEDAPKVSDA 63 Query: 89 LYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YD + RL+ ++ +FPEL P VG Sbjct: 64 DYDALRRRLEEIEHKFPELVSGASPSQKVG 93 >gi|90418183|ref|ZP_01226095.1| DNA ligase [Aurantimonas manganoxydans SI85-9A1] gi|90337855|gb|EAS51506.1| DNA ligase [Aurantimonas manganoxydans SI85-9A1] Length = 703 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 37/70 (52%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K V +L + EA E+E L H + YYR D P TD YD + R A++ +FPEL Sbjct: 4 KAVETLDRDEAAAELERLAGEIAAHDRAYYREDAPTVTDAEYDTLRRRNAAIEARFPELI 63 Query: 109 DEDHPWNTVG 118 ED P VG Sbjct: 64 REDSPSARVG 73 >gi|90424785|ref|YP_533155.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris BisB18] gi|123275077|sp|Q211V0|DNLJ_RHOPB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|90106799|gb|ABD88836.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris BisB18] Length = 795 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 38/71 (53%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + +LSK +A +E++ L H YY+ D P +D YD + R++A++ +FPEL Sbjct: 9 PTDLDTLSKAKAKVELKRLSLEIERHNNAYYQDDAPKISDAEYDALRHRVEAIEAKFPEL 68 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 69 VSSDSPTQKVG 79 >gi|218460243|ref|ZP_03500334.1| NAD-dependent DNA ligase LigA [Rhizobium etli Kim 5] Length = 327 Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 37/68 (54%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L+ EA E+E L K HH Y+ D P +D YD + R DAL+ +FPEL E Sbjct: 8 VDTLTIEEAAAELERLAKEIAHHDALYHGKDQPEISDADYDALKRRNDALEARFPELIRE 67 Query: 111 DHPWNTVG 118 D P VG Sbjct: 68 DSPSRHVG 75 >gi|75675255|ref|YP_317676.1| NAD-dependent DNA ligase [Nitrobacter winogradskyi Nb-255] gi|123773282|sp|Q3STR7|DNLJ_NITWN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|74420125|gb|ABA04324.1| NAD-dependent DNA ligase [Nitrobacter winogradskyi Nb-255] Length = 716 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 38/72 (52%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 V SL++ +A +E + L H + YY+ D P +D YD + RL+A++ +FP+ Sbjct: 7 TPPPVDSLTRSQARVEHKRLALEIETHNERYYQQDAPTVSDATYDALQRRLEAIEARFPD 66 Query: 107 LFDEDHPWNTVG 118 L P TVG Sbjct: 67 LVTASSPTQTVG 78 >gi|169831769|ref|YP_001717751.1| DNA ligase, NAD-dependent [Candidatus Desulforudis audaxviator MP104C] gi|254781311|sp|B1I551|DNLJ_DESAP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|169638613|gb|ACA60119.1| DNA ligase, NAD-dependent [Candidatus Desulforudis audaxviator MP104C] Length = 672 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + EA E L + +H YY LDDP+ D YDR+ L AL+ +PEL D P Sbjct: 1 MKPEEARARAEELRREIEYHDHRYYVLDDPVIEDAEYDRLVRELVALETAYPELVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|218515813|ref|ZP_03512653.1| NAD-dependent DNA ligase LigA [Rhizobium etli 8C-3] Length = 216 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 37/68 (54%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L+ EA E+E L K HH Y+ D P +D YD + R DAL+ +FPEL E Sbjct: 8 VDTLTIEEAAAELERLAKEIAHHDALYHGKDQPEISDADYDALKRRNDALEARFPELIRE 67 Query: 111 DHPWNTVG 118 D P VG Sbjct: 68 DSPSRHVG 75 >gi|166216283|sp|Q07PR9|DNLJ_RHOP5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 715 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 39/78 (50%) Query: 41 LESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 ++S V +L+K +A +E+ L H K YY+ D P +D YD + RL+ + Sbjct: 1 MKSKSKTVPDVATLTKAKAKVELMRLALEIERHDKAYYQEDAPKVSDADYDALRRRLEEI 60 Query: 101 QEQFPELFDEDHPWNTVG 118 + +FPEL P VG Sbjct: 61 EHKFPELVSGASPSQKVG 78 >gi|91977847|ref|YP_570506.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris BisB5] gi|123735250|sp|Q133Y4|DNLJ_RHOPS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|91684303|gb|ABE40605.1| DNA ligase, NAD-dependent [Rhodopseudomonas palustris BisB5] Length = 714 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 37/71 (52%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 A + L+K +A +E+ L H K YY+ D P D YD + RL+A++ +FPEL Sbjct: 9 APDIDKLTKPKAKVELMRLRLAIEGHDKAYYQDDAPKIPDADYDALRRRLEAIEAKFPEL 68 Query: 108 FDEDHPWNTVG 118 P TVG Sbjct: 69 LSASSPSQTVG 79 >gi|148257407|ref|YP_001241992.1| DNA ligase (polydeoxyribonucleotide synthase (NAD+)) [Bradyrhizobium sp. BTAi1] gi|166215399|sp|A5EPJ2|DNLJ_BRASB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|146409580|gb|ABQ38086.1| DNA ligase (Polydeoxyribonucleotide synthase (NAD+)) [Bradyrhizobium sp. BTAi1] Length = 716 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 37/72 (51%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 K V L+K +A +E + L H + YY+ D P +D YD + R +A++ +FPE Sbjct: 9 KPVDVAELTKAQAKVEWKRLALELEVHDRLYYQDDAPKISDAEYDELRRRFNAIETRFPE 68 Query: 107 LFDEDHPWNTVG 118 L + P VG Sbjct: 69 LVSSESPSQKVG 80 >gi|239832299|ref|ZP_04680628.1| DNA ligase, NAD-dependent [Ochrobactrum intermedium LMG 3301] gi|239824566|gb|EEQ96134.1| DNA ligase, NAD-dependent [Ochrobactrum intermedium LMG 3301] Length = 734 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 36/69 (52%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V L++ EA+ E+ L + HH + Y+ D P +D YD + R DA++ +FP L Sbjct: 20 PVEKLTEPEAVSELGRLAREIAHHDELYHANDRPEISDAEYDALKRRNDAIEARFPHLVR 79 Query: 110 EDHPWNTVG 118 D P VG Sbjct: 80 TDSPSLRVG 88 >gi|299131914|ref|ZP_07025109.1| DNA ligase, NAD-dependent [Afipia sp. 1NLS2] gi|298592051|gb|EFI52251.1| DNA ligase, NAD-dependent [Afipia sp. 1NLS2] Length = 706 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 41/70 (58%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 V +L+K +A +E+ L H + YY+ D P +D YD++ +RL A++E+FPEL Sbjct: 10 TPVENLTKAQAKVELTRLALEISMHDERYYQKDAPTVSDADYDKLRQRLSAIEERFPELV 69 Query: 109 DEDHPWNTVG 118 +D P VG Sbjct: 70 AKDSPSQKVG 79 >gi|83592275|ref|YP_426027.1| DNA ligase (NAD+) [Rhodospirillum rubrum ATCC 11170] gi|123753272|sp|Q2RVV5|DNLJ_RHORT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|83575189|gb|ABC21740.1| DNA ligase (NAD+) [Rhodospirillum rubrum ATCC 11170] Length = 698 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 35/69 (50%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V L++ EA E+E L H + Y++ D P TDG YD + R + ++ FPEL Sbjct: 3 PVADLTEAEAARELERLAAEIARHDRLYHQQDAPEITDGEYDALVRRNNEIEAAFPELVR 62 Query: 110 EDHPWNTVG 118 D P VG Sbjct: 63 GDSPSAHVG 71 >gi|146342488|ref|YP_001207536.1| DNA ligase [Bradyrhizobium sp. ORS278] gi|166215400|sp|A4YZJ3|DNLJ_BRASO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|146195294|emb|CAL79319.1| DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) [Bradyrhizobium sp. ORS278] Length = 716 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 40/72 (55%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 ++ V L+K +A +E + L H + YY+ D P +D YD + R +A++++FPE Sbjct: 9 QSVDVADLTKAQAKVEWKRLALELETHDRLYYQEDAPKISDAAYDELRRRFNAIEKRFPE 68 Query: 107 LFDEDHPWNTVG 118 L D P TVG Sbjct: 69 LVSRDSPSQTVG 80 >gi|209884394|ref|YP_002288251.1| DNA ligase, NAD-dependent [Oligotropha carboxidovorans OM5] gi|254781382|sp|B6JB45|DNLJ_OLICO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|209872590|gb|ACI92386.1| DNA ligase, NAD-dependent [Oligotropha carboxidovorans OM5] Length = 706 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 38/70 (54%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 V L+K +A +E + L H + YY+ D P +D YD + +RL+A++ +FPEL Sbjct: 10 PSVDQLTKAQAKVEHKRLALEIAMHDERYYQKDAPTVSDAAYDSLRQRLNAVEARFPELV 69 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 70 TTDSPSQKVG 79 >gi|328950509|ref|YP_004367844.1| DNA ligase [Marinithermus hydrothermalis DSM 14884] gi|328450833|gb|AEB11734.1| DNA ligase [Marinithermus hydrothermalis DSM 14884] Length = 676 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 34/65 (52%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ EA V L + +H YY LDDP +D YD + L AL+ ++P+L D P Sbjct: 1 MTREEAKKRVLELRQAIRYHNYRYYVLDDPEISDAEYDALMRELKALEARYPDLVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQVVG 65 >gi|103486042|ref|YP_615603.1| DNA ligase, NAD-dependent [Sphingopyxis alaskensis RB2256] gi|123078573|sp|Q1GVQ2|DNLJ_SPHAL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|98976119|gb|ABF52270.1| DNA ligase, NAD-dependent [Sphingopyxis alaskensis RB2256] Length = 714 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 36/70 (51%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K V SL++ EA E+ L K HH K Y+ D P +D YD + R A++E FP L Sbjct: 2 KDVGSLTEAEAANELMRLAKQIAHHNKLYHAEDSPEISDADYDALVRRNTAIEEAFPHLI 61 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 62 RADSPNRLVG 71 >gi|222149123|ref|YP_002550080.1| NAD-dependent DNA ligase LigA [Agrobacterium vitis S4] gi|254781248|sp|B9JY41|DNLJ_AGRVS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|221736108|gb|ACM37071.1| DNA ligase [Agrobacterium vitis S4] Length = 719 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 34/73 (46%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D V LS+ +A E+ L HH Y+ D P +D YD + R DA++ +FP Sbjct: 3 DALIPVEDLSEEQAGQELIRLAAAIAHHDALYHGKDQPEISDADYDALKRRNDAIEARFP 62 Query: 106 ELFDEDHPWNTVG 118 L D P VG Sbjct: 63 TLVRSDSPSQRVG 75 >gi|85714986|ref|ZP_01045971.1| NAD-dependent DNA ligase [Nitrobacter sp. Nb-311A] gi|85698183|gb|EAQ36055.1| NAD-dependent DNA ligase [Nitrobacter sp. Nb-311A] Length = 705 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 39/71 (54%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 V SL++ +A +E + LV H + YY+ D P +D YD + RL+A++ +FP+L Sbjct: 8 PPPVDSLTRSQARVEHKRLVLEIEAHNERYYQQDAPTVSDAAYDAMQRRLEAIEARFPDL 67 Query: 108 FDEDHPWNTVG 118 P TVG Sbjct: 68 VTASSPTQTVG 78 >gi|306844319|ref|ZP_07476911.1| DNA ligase, NAD-dependent [Brucella sp. BO1] gi|306275391|gb|EFM57132.1| DNA ligase, NAD-dependent [Brucella sp. BO1] Length = 719 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 37/68 (54%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ +FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDSPEISDAAYDALKRRNEAIEARFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|27381702|ref|NP_773231.1| DNA ligase [Bradyrhizobium japonicum USDA 110] gi|81735382|sp|Q89FV8|DNLJ_BRAJA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|27354871|dbj|BAC51856.1| DNA ligase [Bradyrhizobium japonicum USDA 110] Length = 716 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 38/70 (54%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 + V L+K +A +E+ L H K YY+ D P TD YD + +R +A++++FPE Sbjct: 12 RDVAELTKAQAKVELMRLALELEGHDKRYYQDDAPTVTDAEYDALRQRFNAIEKRFPEFV 71 Query: 109 DEDHPWNTVG 118 + P VG Sbjct: 72 SAESPSQKVG 81 >gi|148658591|ref|YP_001278796.1| DNA ligase [Roseiflexus sp. RS-1] gi|166216236|sp|A5V1U3|DNLJ_ROSS1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|148570701|gb|ABQ92846.1| DNA ligase, NAD-dependent [Roseiflexus sp. RS-1] Length = 726 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ VE L + +H YY LD+P+ +D YD + L AL+ PEL D P Sbjct: 1 MNNDHLTRRVEALREQIRYHNYRYYVLDEPVISDAEYDALMRELRALEAAHPELVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|306843233|ref|ZP_07475843.1| DNA ligase, NAD-dependent [Brucella sp. BO2] gi|306286556|gb|EFM58135.1| DNA ligase, NAD-dependent [Brucella sp. BO2] Length = 719 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDSPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|294852747|ref|ZP_06793420.1| DNA ligase [Brucella sp. NVSL 07-0026] gi|294821336|gb|EFG38335.1| DNA ligase [Brucella sp. NVSL 07-0026] Length = 719 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|256255361|ref|ZP_05460897.1| NAD-dependent DNA ligase LigA [Brucella ceti B1/94] gi|261222562|ref|ZP_05936843.1| NAD-dependent DNA ligase LigA [Brucella ceti B1/94] gi|260921146|gb|EEX87799.1| NAD-dependent DNA ligase LigA [Brucella ceti B1/94] Length = 719 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|83858905|ref|ZP_00952427.1| NAD-dependent DNA ligase [Oceanicaulis alexandrii HTCC2633] gi|83853728|gb|EAP91580.1| NAD-dependent DNA ligase [Oceanicaulis alexandrii HTCC2633] Length = 695 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 38/70 (54%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K V +L+ EA E+E L + H K YY D P +D YD + R A++ +FPEL Sbjct: 6 KDVNALTSDEAASELERLAREISRHDKAYYEKDAPKISDAAYDALRARNSAIEARFPELK 65 Query: 109 DEDHPWNTVG 118 +D P + VG Sbjct: 66 RKDSPSDRVG 75 >gi|225852902|ref|YP_002733135.1| NAD-dependent DNA ligase LigA [Brucella melitensis ATCC 23457] gi|256263616|ref|ZP_05466148.1| DNA ligase [Brucella melitensis bv. 2 str. 63/9] gi|254781270|sp|C0RE59|DNLJ_BRUMB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|225641267|gb|ACO01181.1| DNA ligase, NAD-dependent [Brucella melitensis ATCC 23457] gi|263093668|gb|EEZ17673.1| DNA ligase [Brucella melitensis bv. 2 str. 63/9] gi|326409444|gb|ADZ66509.1| NAD-dependent DNA ligase LigA [Brucella melitensis M28] gi|326539150|gb|ADZ87365.1| DNA ligase, NAD-dependent [Brucella melitensis M5-90] Length = 719 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|256061478|ref|ZP_05451622.1| NAD-dependent DNA ligase LigA [Brucella neotomae 5K33] gi|261325484|ref|ZP_05964681.1| NAD-dependent DNA ligase LigA [Brucella neotomae 5K33] gi|261301464|gb|EEY04961.1| NAD-dependent DNA ligase LigA [Brucella neotomae 5K33] Length = 719 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|114570616|ref|YP_757296.1| DNA ligase [Maricaulis maris MCS10] gi|122315591|sp|Q0AMX9|DNLJ_MARMM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|114341078|gb|ABI66358.1| DNA ligase, NAD-dependent [Maricaulis maris MCS10] Length = 701 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 36/70 (51%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K V L++ EA E L + H K YY+ D P +D YD + +L+A++ +FP+ Sbjct: 5 KDVDQLTEAEARAEHARLAREIAGHDKAYYQSDAPKISDAAYDALRRKLEAIEVRFPQFI 64 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 65 DLLSPTQRVG 74 >gi|17986872|ref|NP_539506.1| NAD-dependent DNA ligase LigA [Brucella melitensis bv. 1 str. 16M] gi|256045051|ref|ZP_05447952.1| NAD-dependent DNA ligase LigA [Brucella melitensis bv. 1 str. Rev.1] gi|260565350|ref|ZP_05835834.1| DNA ligase [Brucella melitensis bv. 1 str. 16M] gi|265991477|ref|ZP_06104034.1| NAD-dependent DNA ligase LigA [Brucella melitensis bv. 1 str. Rev.1] gi|81852173|sp|Q8YI56|DNLJ_BRUME RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|17982511|gb|AAL51770.1| nad-dependent DNA ligase [Brucella melitensis bv. 1 str. 16M] gi|260151418|gb|EEW86512.1| DNA ligase [Brucella melitensis bv. 1 str. 16M] gi|263002261|gb|EEZ14836.1| NAD-dependent DNA ligase LigA [Brucella melitensis bv. 1 str. Rev.1] Length = 719 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|302390293|ref|YP_003826114.1| DNA ligase, NAD-dependent [Thermosediminibacter oceani DSM 16646] gi|302200921|gb|ADL08491.1| DNA ligase, NAD-dependent [Thermosediminibacter oceani DSM 16646] Length = 672 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 39/65 (60%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + EA ++ L ++ +H + YY D+P+ +D YD++ +L+ L++QFPEL D P Sbjct: 1 MDRSEAEARIKELRELINYHNRQYYVYDNPVISDAEYDKLMRQLEKLEKQFPELITPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|254719452|ref|ZP_05181263.1| NAD-dependent DNA ligase LigA [Brucella sp. 83/13] gi|265984457|ref|ZP_06097192.1| NAD-dependent DNA ligase LigA [Brucella sp. 83/13] gi|306839229|ref|ZP_07472046.1| DNA ligase, NAD-dependent [Brucella sp. NF 2653] gi|264663049|gb|EEZ33310.1| NAD-dependent DNA ligase LigA [Brucella sp. 83/13] gi|306405776|gb|EFM62038.1| DNA ligase, NAD-dependent [Brucella sp. NF 2653] Length = 719 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDSPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|254702142|ref|ZP_05163970.1| NAD-dependent DNA ligase LigA [Brucella suis bv. 5 str. 513] gi|261752711|ref|ZP_05996420.1| NAD-dependent DNA ligase LigA [Brucella suis bv. 5 str. 513] gi|261742464|gb|EEY30390.1| NAD-dependent DNA ligase LigA [Brucella suis bv. 5 str. 513] Length = 719 Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|148560656|ref|YP_001259312.1| NAD-dependent DNA ligase LigA [Brucella ovis ATCC 25840] gi|166215401|sp|A5VRG5|DNLJ_BRUO2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|148371913|gb|ABQ61892.1| DNA ligase, NAD-dependent [Brucella ovis ATCC 25840] Length = 719 Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|254714455|ref|ZP_05176266.1| NAD-dependent DNA ligase LigA [Brucella ceti M644/93/1] gi|254717353|ref|ZP_05179164.1| NAD-dependent DNA ligase LigA [Brucella ceti M13/05/1] gi|261219183|ref|ZP_05933464.1| NAD-dependent DNA ligase LigA [Brucella ceti M13/05/1] gi|261322244|ref|ZP_05961441.1| NAD-dependent DNA ligase LigA [Brucella ceti M644/93/1] gi|260924272|gb|EEX90840.1| NAD-dependent DNA ligase LigA [Brucella ceti M13/05/1] gi|261294934|gb|EEX98430.1| NAD-dependent DNA ligase LigA [Brucella ceti M644/93/1] Length = 719 Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|23502291|ref|NP_698418.1| NAD-dependent DNA ligase LigA [Brucella suis 1330] gi|62290313|ref|YP_222106.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 1 str. 9-941] gi|82700237|ref|YP_414811.1| NAD-dependent DNA ligase LigA [Brucella melitensis biovar Abortus 2308] gi|161619368|ref|YP_001593255.1| NAD-dependent DNA ligase LigA [Brucella canis ATCC 23365] gi|163843675|ref|YP_001628079.1| NAD-dependent DNA ligase LigA [Brucella suis ATCC 23445] gi|189024547|ref|YP_001935315.1| DNA ligase [Brucella abortus S19] gi|225627871|ref|ZP_03785908.1| DNA ligase, NAD-dependent [Brucella ceti str. Cudo] gi|254689615|ref|ZP_05152869.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 6 str. 870] gi|254694105|ref|ZP_05155933.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 3 str. Tulya] gi|254697757|ref|ZP_05159585.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 2 str. 86/8/59] gi|254704678|ref|ZP_05166506.1| NAD-dependent DNA ligase LigA [Brucella suis bv. 3 str. 686] gi|254708093|ref|ZP_05169921.1| NAD-dependent DNA ligase LigA [Brucella pinnipedialis M163/99/10] gi|254710462|ref|ZP_05172273.1| NAD-dependent DNA ligase LigA [Brucella pinnipedialis B2/94] gi|254730646|ref|ZP_05189224.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 4 str. 292] gi|256031956|ref|ZP_05445570.1| NAD-dependent DNA ligase LigA [Brucella pinnipedialis M292/94/1] gi|256113974|ref|ZP_05454757.1| NAD-dependent DNA ligase LigA [Brucella melitensis bv. 3 str. Ether] gi|256160155|ref|ZP_05457849.1| NAD-dependent DNA ligase LigA [Brucella ceti M490/95/1] gi|256257864|ref|ZP_05463400.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 9 str. C68] gi|256369836|ref|YP_003107347.1| DNA ligase [Brucella microti CCM 4915] gi|260169093|ref|ZP_05755904.1| NAD-dependent DNA ligase LigA [Brucella sp. F5/99] gi|260546856|ref|ZP_05822595.1| DNA ligase [Brucella abortus NCTC 8038] gi|260566074|ref|ZP_05836544.1| DNA ligase [Brucella suis bv. 4 str. 40] gi|260755142|ref|ZP_05867490.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 6 str. 870] gi|260758361|ref|ZP_05870709.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 4 str. 292] gi|260762187|ref|ZP_05874530.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 2 str. 86/8/59] gi|260884154|ref|ZP_05895768.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 9 str. C68] gi|261214403|ref|ZP_05928684.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 3 str. Tulya] gi|261315595|ref|ZP_05954792.1| NAD-dependent DNA ligase LigA [Brucella pinnipedialis M163/99/10] gi|261318033|ref|ZP_05957230.1| NAD-dependent DNA ligase LigA [Brucella pinnipedialis B2/94] gi|261755371|ref|ZP_05999080.1| NAD-dependent DNA ligase LigA [Brucella suis bv. 3 str. 686] gi|261758598|ref|ZP_06002307.1| DNA ligase [Brucella sp. F5/99] gi|265989064|ref|ZP_06101621.1| NAD-dependent DNA ligase LigA [Brucella pinnipedialis M292/94/1] gi|265995315|ref|ZP_06107872.1| NAD-dependent DNA ligase LigA [Brucella melitensis bv. 3 str. Ether] gi|265998527|ref|ZP_06111084.1| NAD-dependent DNA ligase LigA [Brucella ceti M490/95/1] gi|297248700|ref|ZP_06932418.1| DNA ligase, NAD-dependent [Brucella abortus bv. 5 str. B3196] gi|75496544|sp|Q57C89|DNLJ_BRUAB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|81752355|sp|Q8FZQ3|DNLJ_BRUSU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|123768412|sp|Q2YLZ6|DNLJ_BRUA2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190359236|sp|A9M679|DNLJ_BRUC2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190359237|sp|B0CHK8|DNLJ_BRUSI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781269|sp|B2S6P4|DNLJ_BRUA1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|23348266|gb|AAN30333.1| DNA ligase, NAD-dependent [Brucella suis 1330] gi|62196445|gb|AAX74745.1| LigA, DNA ligase, NAD-dependent [Brucella abortus bv. 1 str. 9-941] gi|82616338|emb|CAJ11395.1| BRCT domain:NAD-dependent DNA ligase:ATP/GTP-binding site motif A (P-loop):Zn-finger in NAD-dependent DNA ligase, C4 type:NAD [Brucella melitensis biovar Abortus 2308] gi|161336179|gb|ABX62484.1| DNA ligase, NAD-dependent [Brucella canis ATCC 23365] gi|163674398|gb|ABY38509.1| DNA ligase, NAD-dependent [Brucella suis ATCC 23445] gi|189020119|gb|ACD72841.1| DNA ligase [Brucella abortus S19] gi|225617876|gb|EEH14921.1| DNA ligase, NAD-dependent [Brucella ceti str. Cudo] gi|255999999|gb|ACU48398.1| DNA ligase [Brucella microti CCM 4915] gi|260095906|gb|EEW79783.1| DNA ligase [Brucella abortus NCTC 8038] gi|260155592|gb|EEW90672.1| DNA ligase [Brucella suis bv. 4 str. 40] gi|260668679|gb|EEX55619.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 4 str. 292] gi|260672619|gb|EEX59440.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 2 str. 86/8/59] gi|260675250|gb|EEX62071.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 6 str. 870] gi|260873682|gb|EEX80751.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 9 str. C68] gi|260916010|gb|EEX82871.1| NAD-dependent DNA ligase LigA [Brucella abortus bv. 3 str. Tulya] gi|261297256|gb|EEY00753.1| NAD-dependent DNA ligase LigA [Brucella pinnipedialis B2/94] gi|261304621|gb|EEY08118.1| NAD-dependent DNA ligase LigA [Brucella pinnipedialis M163/99/10] gi|261738582|gb|EEY26578.1| DNA ligase [Brucella sp. F5/99] gi|261745124|gb|EEY33050.1| NAD-dependent DNA ligase LigA [Brucella suis bv. 3 str. 686] gi|262553151|gb|EEZ08985.1| NAD-dependent DNA ligase LigA [Brucella ceti M490/95/1] gi|262766428|gb|EEZ12217.1| NAD-dependent DNA ligase LigA [Brucella melitensis bv. 3 str. Ether] gi|264661261|gb|EEZ31522.1| NAD-dependent DNA ligase LigA [Brucella pinnipedialis M292/94/1] gi|297175869|gb|EFH35216.1| DNA ligase, NAD-dependent [Brucella abortus bv. 5 str. B3196] Length = 719 Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|52425821|ref|YP_088958.1| NAD-dependent DNA ligase LigA [Mannheimia succiniciproducens MBEL55E] gi|81386743|sp|Q65RN7|DNLJ_MANSM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|52307873|gb|AAU38373.1| Lig protein [Mannheimia succiniciproducens MBEL55E] Length = 675 Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + +++ L +H+ Y+ LDDP D YDR+ +L AL++Q PEL D P Sbjct: 1 MTIMDINQQIKQLRDTLRYHEYQYHVLDDPKIPDAEYDRLFHQLKALEQQHPELITADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|237815820|ref|ZP_04594817.1| DNA ligase, NAD-dependent [Brucella abortus str. 2308 A] gi|237789118|gb|EEP63329.1| DNA ligase, NAD-dependent [Brucella abortus str. 2308 A] Length = 725 Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 12 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 71 Query: 111 DHPWNTVG 118 D P VG Sbjct: 72 DSPSRRVG 79 >gi|326387612|ref|ZP_08209218.1| DNA ligase, NAD-dependent [Novosphingobium nitrogenifigens DSM 19370] gi|326207658|gb|EGD58469.1| DNA ligase, NAD-dependent [Novosphingobium nitrogenifigens DSM 19370] Length = 687 Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 34/69 (49%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + ++++ +A E+ L + +H + Y+ LD P D YD + R ++ FP L Sbjct: 3 IDAMTEADAANELMRLARQIAYHDRLYHTLDTPEIADAEYDALVRRNAEIEAAFPHLIRA 62 Query: 111 DHPWNTVGY 119 D P VG+ Sbjct: 63 DSPSRKVGH 71 >gi|209963935|ref|YP_002296850.1| DNA ligase, NAD-dependent [Rhodospirillum centenum SW] gi|254781401|sp|B6IRF1|DNLJ_RHOCS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|209957401|gb|ACI98037.1| DNA ligase, NAD-dependent [Rhodospirillum centenum SW] Length = 719 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 35/69 (50%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V +L+ +A E LV+ HH+ YY D P D YD + RL L+ +FPEL Sbjct: 11 PVETLTLDQAAAEHAALVREIAHHRALYYGKDAPEIADSAYDALEHRLAGLEARFPELVT 70 Query: 110 EDHPWNTVG 118 D P TVG Sbjct: 71 PDSPTQTVG 79 >gi|260892973|ref|YP_003239070.1| DNA ligase, NAD-dependent [Ammonifex degensii KC4] gi|260865114|gb|ACX52220.1| DNA ligase, NAD-dependent [Ammonifex degensii KC4] Length = 672 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 LSK EA +E L + +H YY LD P+ +D YDR+ L AL+E FPE + P Sbjct: 5 LSKEEAKRRIEELRREIAYHDYRYYVLDSPVISDAEYDRLVLELMALEEAFPEFITPNSP 64 Query: 114 WNTVG 118 VG Sbjct: 65 TQRVG 69 >gi|307944884|ref|ZP_07660221.1| DNA ligase, NAD-dependent [Roseibium sp. TrichSKD4] gi|307771808|gb|EFO31032.1| DNA ligase, NAD-dependent [Roseibium sp. TrichSKD4] Length = 721 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 36/69 (52%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V +L+ +A E+E L H K Y++ D P +D YD + R A++ +FP+L Sbjct: 14 DVEALTSEQAETELERLANAIAKHDKLYHQDDAPAISDADYDALRRRNTAIEARFPDLVR 73 Query: 110 EDHPWNTVG 118 +D P VG Sbjct: 74 DDSPSRNVG 82 >gi|110634347|ref|YP_674555.1| DNA ligase, NAD-dependent [Mesorhizobium sp. BNC1] gi|123162160|sp|Q11GT5|DNLJ_MESSB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|110285331|gb|ABG63390.1| DNA ligase, NAD-dependent [Chelativorans sp. BNC1] Length = 703 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 33/69 (47%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V L++ +A E+ L + H + YY D P +D YD + R A+++ FP L Sbjct: 7 PVDELTEEQAKDELARLAQEIGRHDRLYYSEDAPEVSDAEYDALRRRNLAIEQAFPNLIR 66 Query: 110 EDHPWNTVG 118 D P +G Sbjct: 67 ADSPSKRIG 75 >gi|108803178|ref|YP_643115.1| DNA ligase, NAD-dependent [Rubrobacter xylanophilus DSM 9941] gi|122976160|sp|Q1AZ75|DNLJ_RUBXD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|108764421|gb|ABG03303.1| DNA ligase, NAD-dependent [Rubrobacter xylanophilus DSM 9941] Length = 685 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 31/62 (50%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 EA VE L + +H + YY D P +D YD + L+ L+ +FPEL D P Sbjct: 18 AEARQRVEELREQIRYHNRKYYVEDAPEISDAEYDALYRELEELESRFPELVTPDSPTQR 77 Query: 117 VG 118 VG Sbjct: 78 VG 79 >gi|134300185|ref|YP_001113681.1| NAD-dependent DNA ligase [Desulfotomaculum reducens MI-1] gi|190359251|sp|A4J703|DNLJ_DESRM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|134052885|gb|ABO50856.1| DNA ligase, NAD-dependent [Desulfotomaculum reducens MI-1] Length = 670 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 32/62 (51%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ VE L + HH YY LD P TD YD++ + L L+E+ PEL D P Sbjct: 6 QQSKARVEALRREINHHNYQYYVLDQPTITDAQYDQLMQELLRLEERHPELVTPDSPTQR 65 Query: 117 VG 118 VG Sbjct: 66 VG 67 >gi|156740882|ref|YP_001431011.1| DNA ligase, NAD-dependent [Roseiflexus castenholzii DSM 13941] gi|190359279|sp|A7NHP6|DNLJ_ROSCS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|156232210|gb|ABU56993.1| DNA ligase, NAD-dependent [Roseiflexus castenholzii DSM 13941] Length = 718 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + + E L + +H YY LD+P+ +D YD + L L+ PEL D P Sbjct: 1 MTSNDPVRRAETLREQIRYHNYRYYVLDEPVISDAEYDALMRELRELEAAHPELVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|296132371|ref|YP_003639618.1| DNA ligase, NAD-dependent [Thermincola sp. JR] gi|296030949|gb|ADG81717.1| DNA ligase, NAD-dependent [Thermincola potens JR] Length = 665 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A + L K H +YY LD P TD YDR+ L L++Q+P+L D P Sbjct: 1 MDKAAAAKRINELRKQIEEHNYYYYVLDRPRITDAEYDRLMRELTELEQQYPDLVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|20807100|ref|NP_622271.1| NAD-dependent DNA ligase [Thermoanaerobacter tengcongensis MB4] gi|81482513|sp|Q8RC42|DNLJ_THETN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|20515592|gb|AAM23875.1| NAD-dependent DNA ligase (contains BRCT domain type II) [Thermoanaerobacter tengcongensis MB4] Length = 666 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + EA +E L + +H YY LD P +D YD + L L+E++PE D P Sbjct: 1 MDREEARKRIEELREKINYHNYRYYVLDQPEISDYEYDMLMRELIELEEKYPEFKTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|313903518|ref|ZP_07836909.1| DNA ligase, NAD-dependent [Thermaerobacter subterraneus DSM 13965] gi|313466339|gb|EFR61862.1| DNA ligase, NAD-dependent [Thermaerobacter subterraneus DSM 13965] Length = 817 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Query: 44 WLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQ 103 A+ V + A VE L + HH YY LD P D YD + +L L+++ Sbjct: 43 AERPAEDVPA-DLEAARARVEALREQIRHHDYLYYVLDRPEIDDAAYDALMRQLRELEQR 101 Query: 104 FPELFDEDHPWNTVG 118 FPEL D P VG Sbjct: 102 FPELVTPDSPTQRVG 116 >gi|297566494|ref|YP_003685466.1| DNA ligase, NAD-dependent [Meiothermus silvanus DSM 9946] gi|296850943|gb|ADH63958.1| DNA ligase, NAD-dependent [Meiothermus silvanus DSM 9946] Length = 670 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 33/61 (54%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EA + L + +H YY LDDP+ +D YDR+ L L+ ++PEL D P TV Sbjct: 10 EAQRRIHQLREEIRYHNYRYYVLDDPVISDAEYDRLLRELKELEARYPELVTPDSPTQTV 69 Query: 118 G 118 G Sbjct: 70 G 70 >gi|73541575|ref|YP_296095.1| NAD-dependent DNA ligase [Ralstonia eutropha JMP134] gi|123732913|sp|Q470D2|DNLJ_RALEJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|72118988|gb|AAZ61251.1| NAD-dependent DNA ligase [Ralstonia eutropha JMP134] Length = 711 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 30/73 (41%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D + L A V++L H YY LD P D YD + L AL+ + P Sbjct: 11 DASAPAGGLPPATAAERVQWLRDELDRHNYQYYVLDAPTIPDAEYDALFTELQALEAEHP 70 Query: 106 ELFDEDHPWNTVG 118 EL D P VG Sbjct: 71 ELLTPDSPTQRVG 83 >gi|163760776|ref|ZP_02167856.1| DNA ligase, NAD-dependent [Hoeflea phototrophica DFL-43] gi|162282098|gb|EDQ32389.1| DNA ligase, NAD-dependent [Hoeflea phototrophica DFL-43] Length = 739 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 37/72 (51%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 K + +LS+ EA E++ L H + Y+R D P+ +D YD R A++E+FP Sbjct: 40 DTKPIEALSEAEAKAELDRLAAEIARHDEAYHRKDAPIVSDAEYDAFKRRNLAIEERFPH 99 Query: 107 LFDEDHPWNTVG 118 L D P VG Sbjct: 100 LRLADSPSLKVG 111 >gi|315121970|ref|YP_004062459.1| DNA ligase, NAD-dependent [Candidatus Liberibacter solanacearum CLso-ZC1] gi|315122938|ref|YP_004063427.1| DNA ligase, NAD-dependent [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495372|gb|ADR51971.1| DNA ligase, NAD-dependent [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496340|gb|ADR52939.1| DNA ligase, NAD-dependent [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 127 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 49/99 (49%), Positives = 61/99 (61%), Gaps = 2/99 (2%) Query: 23 QWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRL-D 81 Q K LL EAKFLP R L ++ K V+ LS EA+IE EYL KI LHH++WYYRL D Sbjct: 29 QLKSLLKFEAKFLPTPRQLLKIINDFKPVSQLSFWEALIETEYLTKIVLHHRRWYYRLSD 88 Query: 82 DPLFTDGLYDRVSERLDALQEQFPELFDEDHP-WNTVGY 119 + D YD++ R+ L E FPEL+ HP + VGY Sbjct: 89 ETPLLDADYDKIEIRIIKLAEHFPELYSLAHPIISEVGY 127 >gi|296285034|ref|ZP_06863032.1| DNA ligase [Citromicrobium bathyomarinum JL354] Length = 733 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Query: 45 LDKAKKVTS-LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQ 103 +D K + LS+ EA E+ L + H + Y+ D P TD YD + R +AL+ Sbjct: 1 MDDQKDLAEPLSEAEAANELMRLARTIRKHNRLYHAEDAPEITDQEYDALVRRNEALEAA 60 Query: 104 FPELFDEDHPWNTVGY 119 FP+L D P VG+ Sbjct: 61 FPDLVRPDSPSKGVGH 76 >gi|146312580|ref|YP_001177654.1| NAD-dependent DNA ligase LigA [Enterobacter sp. 638] gi|190359255|sp|A4WD23|DNLJ_ENT38 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145319456|gb|ABP61603.1| DNA ligase, NAD-dependent [Enterobacter sp. 638] Length = 671 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q PEL D P VG Sbjct: 4 IEQQLTQLRTTLRHHEYLYHVMDAPEVPDAEYDRLMRELRELEAQHPELVTPDSPTQRVG 63 >gi|83590843|ref|YP_430852.1| DNA ligase, NAD-dependent [Moorella thermoacetica ATCC 39073] gi|123739230|sp|Q2RGY0|DNLJ_MOOTA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|83573757|gb|ABC20309.1| DNA ligase, NAD-dependent [Moorella thermoacetica ATCC 39073] Length = 666 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + A VE L ++ H YY LD P +D YD + + L AL+E +PEL D P Sbjct: 1 MDLAAARQRVEELRRLIEEHNYRYYVLDQPSISDREYDALMQELIALEEAYPELRTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|261868202|ref|YP_003256124.1| NAD-dependent DNA ligase LigA [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413534|gb|ACX82905.1| DNA ligase, NAD-dependent [Aggregatibacter actinomycetemcomitans D11S-1] Length = 670 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 33/60 (55%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K HH+ Y+ LDDP D YDR+ +L AL++Q PEL D P VG Sbjct: 5 IQQQIDDLRKTLRHHEYQYHVLDDPQIPDSEYDRLFHQLKALEQQHPELVTADSPTQRVG 64 >gi|293391716|ref|ZP_06636050.1| DNA ligase, NAD-dependent [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952250|gb|EFE02369.1| DNA ligase, NAD-dependent [Aggregatibacter actinomycetemcomitans D7S-1] Length = 671 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 33/60 (55%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K HH+ Y+ LDDP D YDR+ +L AL++Q PEL D P VG Sbjct: 5 IQQQIDDLRKTLRHHEYQYHVLDDPQIPDSEYDRLFHQLKALEQQHPELVTADSPTQRVG 64 >gi|261340751|ref|ZP_05968609.1| DNA ligase, NAD-dependent [Enterobacter cancerogenus ATCC 35316] gi|288317173|gb|EFC56111.1| DNA ligase, NAD-dependent [Enterobacter cancerogenus ATCC 35316] Length = 671 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q PEL D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEVPDAEYDRLMRELRELEAQHPELITPDSPTQRVG 63 >gi|152979719|ref|YP_001345348.1| NAD-dependent DNA ligase LigA [Actinobacillus succinogenes 130Z] gi|190359224|sp|A6VR16|DNLJ_ACTSZ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|150841442|gb|ABR75413.1| DNA ligase, NAD-dependent [Actinobacillus succinogenes 130Z] Length = 672 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 32/61 (52%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++ L HH+ Y+ LD+P D YDR+ RL AL++Q PEL D P V Sbjct: 3 DIQNQINQLRNTLRHHEYQYHVLDNPEIPDSEYDRLFHRLKALEQQHPELISADSPTQRV 62 Query: 118 G 118 G Sbjct: 63 G 63 >gi|289208742|ref|YP_003460808.1| DNA ligase, NAD-dependent [Thioalkalivibrio sp. K90mix] gi|288944373|gb|ADC72072.1| DNA ligase, NAD-dependent [Thioalkalivibrio sp. K90mix] Length = 697 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 35/71 (49%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 ++ T+ + GE +E L + HH YY LDDP +D +D + L+ L+ P+L Sbjct: 7 SRDGTTGAAGEVGERIEQLRRQIEHHNYRYYVLDDPEVSDAEFDALMRELEQLEADHPDL 66 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 67 VTPDSPTQRVG 77 >gi|283786048|ref|YP_003365913.1| DNA ligase [Citrobacter rodentium ICC168] gi|282949502|emb|CBG89116.1| DNA ligase [Citrobacter rodentium ICC168] Length = 671 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ Q PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEVPDAEYDRLMRELRELEAQHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|253988889|ref|YP_003040245.1| NAD-dependent DNA ligase LigA [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780339|emb|CAQ83500.1| DNA ligase [Photorhabdus asymbiotica] Length = 672 Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L K HH+ Y+ +D P +D YDR+ + L L+ Q PEL D P VG Sbjct: 5 AQQIENLRKTLRHHEYLYHVMDAPEISDAEYDRLMQELKTLEGQHPELITSDSPTQRVG 63 >gi|149184723|ref|ZP_01863041.1| DNA ligase [Erythrobacter sp. SD-21] gi|148832043|gb|EDL50476.1| DNA ligase [Erythrobacter sp. SD-21] Length = 690 Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 +K V +++ EA E+ L + H K Y+ D P TD +D + R L+EQFP L Sbjct: 4 SKPVD-MTEAEAANELMRLARAIAKHNKLYHAEDAPEITDQEFDALVRRNAELEEQFPHL 62 Query: 108 FDEDHPWNTVGY 119 ED P VG+ Sbjct: 63 VREDSPSKVVGH 74 >gi|85374270|ref|YP_458332.1| DNA ligase [Erythrobacter litoralis HTCC2594] gi|123409617|sp|Q2N9V6|DNLJ_ERYLH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|84787353|gb|ABC63535.1| DNA ligase [Erythrobacter litoralis HTCC2594] Length = 736 Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 35/71 (49%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 ++ +LS+ EA E+ L + H + Y+ D P TD YD + R L+ FP L Sbjct: 3 TELENLSEAEAANELMRLARQIAKHDRLYHAEDAPEITDQEYDALVRRNAELEAAFPHLV 62 Query: 109 DEDHPWNTVGY 119 ED P VG+ Sbjct: 63 REDSPSRKVGH 73 >gi|323967844|gb|EGB63256.1| DNA ligase [Escherichia coli M863] gi|327252066|gb|EGE63738.1| DNA ligase, NAD-dependent [Escherichia coli STEC_7v] Length = 671 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|226945096|ref|YP_002800169.1| NAD-dependent DNA ligase LigA [Azotobacter vinelandii DJ] gi|254781546|sp|C1DN27|DNLJ_AZOVD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|226720023|gb|ACO79194.1| DNA ligase, NAD-dependent [Azotobacter vinelandii DJ] Length = 784 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 54 LSKGE-AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++ + A + L H YY LD P D YDR+ L AL+ + PEL + Sbjct: 1 MTDAQTAAERIARLRSEIDEHNYRYYVLDAPSVPDAEYDRLFNELKALEAEHPELVTPES 60 Query: 113 PWNTVG 118 P VG Sbjct: 61 PTQRVG 66 >gi|322437173|ref|YP_004219385.1| DNA ligase, NAD-dependent [Acidobacterium sp. MP5ACTX9] gi|321164900|gb|ADW70605.1| DNA ligase, NAD-dependent [Acidobacterium sp. MP5ACTX9] Length = 704 Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 36/65 (55%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SKG +V+ L + HH+ YY +D P TDG YD + RL AL+ + PE+ D P Sbjct: 1 MSKGSVEEQVKELREQLEHHEHLYYVMDTPELTDGQYDSLMNRLKALEAEHPEMVTSDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|154245706|ref|YP_001416664.1| DNA ligase, NAD-dependent [Xanthobacter autotrophicus Py2] gi|254782313|sp|A7IG64|DNLJ_XANP2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|154159791|gb|ABS67007.1| DNA ligase, NAD-dependent [Xanthobacter autotrophicus Py2] Length = 720 Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 27/72 (37%), Positives = 37/72 (51%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 +A V LS EA E + L + H YYR D P+ +D YD + R +A++E+FP Sbjct: 17 RAIPVDDLSPAEAASEHKALAQEITGHDAAYYREDAPVVSDAEYDALRHRYEAIEERFPG 76 Query: 107 LFDEDHPWNTVG 118 L ED VG Sbjct: 77 LRGEDSLSEKVG 88 >gi|310823543|ref|YP_003955901.1| DNA ligase [Stigmatella aurantiaca DW4/3-1] gi|309396615|gb|ADO74074.1| DNA ligase [Stigmatella aurantiaca DW4/3-1] Length = 673 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 28/65 (43%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + A L + HH YY LD P +D YDR+ L L+ QFP L D P Sbjct: 1 MDLKTAETRARDLRRELAHHNHRYYVLDSPEVSDAEYDRLMRELQGLEAQFPALATPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|197105771|ref|YP_002131148.1| DNA ligase, NAD-dependent [Phenylobacterium zucineum HLK1] gi|254781386|sp|B4RFE9|DNLJ_PHEZH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|196479191|gb|ACG78719.1| DNA ligase, NAD-dependent [Phenylobacterium zucineum HLK1] Length = 692 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 34/70 (48%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K V SL++ EA E+ L H YYR D P +D YD + R D L+ FP L Sbjct: 2 KSVESLTEAEAAEELTRLADEIAAHDIRYYREDAPTISDAAYDALRRRNDELEAAFPHLI 61 Query: 109 DEDHPWNTVG 118 E+ P +G Sbjct: 62 RENSPSLRIG 71 >gi|254470147|ref|ZP_05083551.1| DNA ligase, NAD-dependent [Pseudovibrio sp. JE062] gi|211960458|gb|EEA95654.1| DNA ligase, NAD-dependent [Pseudovibrio sp. JE062] Length = 722 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 39/72 (54%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 K + +L+ EA +E+E L ++ + + Y+ D P+ D YD + R AL+ +FPE Sbjct: 7 SQKDIEALNAEEAALELERLARLIAEYDEAYHTQDAPIVDDATYDGLRRRNAALEAKFPE 66 Query: 107 LFDEDHPWNTVG 118 L D P N VG Sbjct: 67 LVRADSPSNRVG 78 >gi|319899147|ref|YP_004159240.1| DNA ligase [Bartonella clarridgeiae 73] gi|319403111|emb|CBI76669.1| DNA ligase [Bartonella clarridgeiae 73] Length = 718 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 35/68 (51%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + +L+ EA E+E+L K H YYR D P +D YD + R A++ FPEL Sbjct: 6 IKNLTALEAASELEWLAKEIARHDVLYYRDDQPEISDAEYDALRRRNGAIENLFPELIRA 65 Query: 111 DHPWNTVG 118 D P +G Sbjct: 66 DSPTFKIG 73 >gi|227822641|ref|YP_002826613.1| NAD-dependent DNA ligase LigA [Sinorhizobium fredii NGR234] gi|254781400|sp|C3MEL9|DNLJ_RHISN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|227341642|gb|ACP25860.1| DNA ligase [Sinorhizobium fredii NGR234] Length = 717 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 38/74 (51%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 L++ K V L++ EA E+ +LV H Y+ D P +D YD + R D ++E F Sbjct: 2 LNEKKPVEQLTETEAAEELAFLVTELARHDALYHGQDAPEISDADYDALKRRNDLIEELF 61 Query: 105 PELFDEDHPWNTVG 118 P L ED P +G Sbjct: 62 PALIREDSPSRKIG 75 >gi|157144662|ref|YP_001451981.1| NAD-dependent DNA ligase LigA [Citrobacter koseri ATCC BAA-895] gi|166215574|sp|A8ADI2|DNLJ_CITK8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157081867|gb|ABV11545.1| hypothetical protein CKO_00382 [Citrobacter koseri ATCC BAA-895] Length = 671 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQHPDLITPDSPSQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|78043193|ref|YP_359946.1| DNA ligase, NAD-dependent [Carboxydothermus hydrogenoformans Z-2901] gi|123743192|sp|Q3AD38|DNLJ_CARHZ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|77995308|gb|ABB14207.1| DNA ligase, NAD-dependent [Carboxydothermus hydrogenoformans Z-2901] Length = 664 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K +E L + +H YY LD P +D YDR+ L +L++Q+PE D P Sbjct: 1 MDKEAVKKRIEELRALLHYHNYRYYVLDQPEISDAEYDRMLRELISLEQQYPEFITPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|222099565|ref|YP_002534133.1| DNA ligase [Thermotoga neapolitana DSM 4359] gi|254781438|sp|B9K734|DNLJ_THENN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|221571955|gb|ACM22767.1| DNA ligase [Thermotoga neapolitana DSM 4359] Length = 693 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 34/63 (53%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 E + EVE L + +H YY L+DP+ TD YDR+ RL L+ +PEL D P Sbjct: 12 PKEVIEEVERLREEIEYHNYRYYVLNDPVITDEEYDRLMRRLIELERMYPELVTPDSPTQ 71 Query: 116 TVG 118 VG Sbjct: 72 RVG 74 >gi|15603581|ref|NP_246655.1| NAD-dependent DNA ligase LigA [Pasteurella multocida subsp. multocida str. Pm70] gi|81636517|sp|Q9CKA9|DNLJ_PASMU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|12722128|gb|AAK03800.1| Lig [Pasteurella multocida subsp. multocida str. Pm70] Length = 673 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 34/60 (56%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E+E L + +H+ Y+ LD+P D YDR+ RL L++Q+P+ F D P VG Sbjct: 5 IKLEIEQLRQTLRYHEYQYHVLDNPQIPDAEYDRLFHRLKTLEQQYPQWFSPDSPTQRVG 64 >gi|332089820|gb|EGI94921.1| DNA ligase, NAD-dependent [Shigella dysenteriae 155-74] Length = 671 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|296104078|ref|YP_003614224.1| NAD-dependent DNA ligase LigA [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058537|gb|ADF63275.1| NAD-dependent DNA ligase LigA [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 671 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q PEL D P VG Sbjct: 4 IEQQITELRTTLRHHEYLYHVMDAPEVPDAEYDRLMRELRDLEAQHPELITPDSPTQRVG 63 >gi|87199755|ref|YP_497012.1| DNA ligase, NAD-dependent [Novosphingobium aromaticivorans DSM 12444] gi|123763512|sp|Q2G7J5|DNLJ_NOVAD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|87135436|gb|ABD26178.1| DNA ligase, NAD-dependent [Novosphingobium aromaticivorans DSM 12444] Length = 721 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 33/68 (48%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++L++ EA E+ L + H + Y+ D P TD YD + R L+ FP L D Sbjct: 4 SALTEAEAANELMRLARQIAKHNRLYHAEDSPEITDAEYDALVRRNAELEAAFPHLIRPD 63 Query: 112 HPWNTVGY 119 P +G+ Sbjct: 64 SPSAQIGH 71 >gi|332088205|gb|EGI93327.1| DNA ligase, NAD-dependent [Shigella boydii 5216-82] Length = 671 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|331673883|ref|ZP_08374646.1| DNA ligase, NAD-dependent [Escherichia coli TA280] gi|331069156|gb|EGI40548.1| DNA ligase, NAD-dependent [Escherichia coli TA280] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|331653837|ref|ZP_08354838.1| DNA ligase, NAD-dependent [Escherichia coli M718] gi|331048686|gb|EGI20762.1| DNA ligase, NAD-dependent [Escherichia coli M718] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|300940348|ref|ZP_07154941.1| DNA ligase, NAD-dependent [Escherichia coli MS 21-1] gi|300454839|gb|EFK18332.1| DNA ligase, NAD-dependent [Escherichia coli MS 21-1] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|281179485|dbj|BAI55815.1| DNA ligase [Escherichia coli SE15] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|218690549|ref|YP_002398761.1| NAD-dependent DNA ligase LigA [Escherichia coli ED1a] gi|254781322|sp|B7MY64|DNLJ_ECO81 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218428113|emb|CAR09030.2| DNA ligase, NAD(+)-dependent [Escherichia coli ED1a] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|218548148|ref|YP_002381939.1| NAD-dependent DNA ligase LigA [Escherichia fergusonii ATCC 35469] gi|331684067|ref|ZP_08384663.1| DNA ligase, NAD-dependent [Escherichia coli H299] gi|254781331|sp|B7LL73|DNLJ_ESCF3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218355689|emb|CAQ88301.1| DNA ligase, NAD(+)-dependent [Escherichia fergusonii ATCC 35469] gi|315298233|gb|EFU57493.1| DNA ligase, NAD-dependent [Escherichia coli MS 16-3] gi|331079019|gb|EGI50221.1| DNA ligase, NAD-dependent [Escherichia coli H299] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|301648064|ref|ZP_07247828.1| DNA ligase, NAD-dependent [Escherichia coli MS 146-1] gi|307139053|ref|ZP_07498409.1| NAD-dependent DNA ligase LigA [Escherichia coli H736] gi|331643032|ref|ZP_08344167.1| DNA ligase, NAD-dependent [Escherichia coli H736] gi|301073835|gb|EFK88641.1| DNA ligase, NAD-dependent [Escherichia coli MS 146-1] gi|331039830|gb|EGI12050.1| DNA ligase, NAD-dependent [Escherichia coli H736] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|301022290|ref|ZP_07186186.1| DNA ligase, NAD-dependent [Escherichia coli MS 69-1] gi|300397609|gb|EFJ81147.1| DNA ligase, NAD-dependent [Escherichia coli MS 69-1] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|293410811|ref|ZP_06654387.1| DNA ligase [Escherichia coli B354] gi|291471279|gb|EFF13763.1| DNA ligase [Escherichia coli B354] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|293415682|ref|ZP_06658325.1| DNA ligase [Escherichia coli B185] gi|291433330|gb|EFF06309.1| DNA ligase [Escherichia coli B185] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|218700877|ref|YP_002408506.1| NAD-dependent DNA ligase LigA [Escherichia coli IAI39] gi|254781321|sp|B7NPU7|DNLJ_ECO7I RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218370863|emb|CAR18680.1| DNA ligase, NAD(+)-dependent [Escherichia coli IAI39] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|16130337|ref|NP_416906.1| DNA ligase, NAD(+)-dependent [Escherichia coli str. K-12 substr. MG1655] gi|89109225|ref|AP_003005.1| DNA ligase, NAD(+)-dependent [Escherichia coli str. K-12 substr. W3110] gi|170019306|ref|YP_001724260.1| NAD-dependent DNA ligase LigA [Escherichia coli ATCC 8739] gi|170082020|ref|YP_001731340.1| DNA ligase, NAD(+)-dependent [Escherichia coli str. K-12 substr. DH10B] gi|188495579|ref|ZP_03002849.1| DNA ligase, NAD-dependent [Escherichia coli 53638] gi|238901574|ref|YP_002927370.1| DNA ligase, NAD(+)-dependent [Escherichia coli BW2952] gi|256021895|ref|ZP_05435760.1| NAD-dependent DNA ligase LigA [Escherichia sp. 4_1_40B] gi|300951893|ref|ZP_07165701.1| DNA ligase, NAD-dependent [Escherichia coli MS 116-1] gi|300957240|ref|ZP_07169472.1| DNA ligase, NAD-dependent [Escherichia coli MS 175-1] gi|301023745|ref|ZP_07187485.1| DNA ligase, NAD-dependent [Escherichia coli MS 196-1] gi|312973347|ref|ZP_07787519.1| DNA ligase, NAD-dependent [Escherichia coli 1827-70] gi|2506362|sp|P15042|DNLJ_ECOLI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781324|sp|B1XA82|DNLJ_ECODH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781325|sp|B1IX60|DNLJ_ECOLC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|149242732|pdb|2OWO|A Chain A, Last Stop On The Road To Repair: Structure Of E.Coli Dna Ligase Bound To Nicked Dna-Adenylate gi|146613|gb|AAA24070.1| DNA ligase (EC 6.5.1.2) [Escherichia coli] gi|1788750|gb|AAC75464.1| DNA ligase, NAD(+)-dependent [Escherichia coli str. K-12 substr. MG1655] gi|85675396|dbj|BAA16282.2| DNA ligase, NAD(+)-dependent [Escherichia coli str. K12 substr. W3110] gi|169754234|gb|ACA76933.1| DNA ligase, NAD-dependent [Escherichia coli ATCC 8739] gi|169889855|gb|ACB03562.1| DNA ligase, NAD(+)-dependent [Escherichia coli str. K-12 substr. DH10B] gi|188490778|gb|EDU65881.1| DNA ligase, NAD-dependent [Escherichia coli 53638] gi|238860822|gb|ACR62820.1| DNA ligase, NAD(+)-dependent [Escherichia coli BW2952] gi|260448502|gb|ACX38924.1| DNA ligase, NAD-dependent [Escherichia coli DH1] gi|299880716|gb|EFI88927.1| DNA ligase, NAD-dependent [Escherichia coli MS 196-1] gi|300315993|gb|EFJ65777.1| DNA ligase, NAD-dependent [Escherichia coli MS 175-1] gi|300448878|gb|EFK12498.1| DNA ligase, NAD-dependent [Escherichia coli MS 116-1] gi|309702699|emb|CBJ02028.1| DNA ligase [Escherichia coli ETEC H10407] gi|310331942|gb|EFP99177.1| DNA ligase, NAD-dependent [Escherichia coli 1827-70] gi|315137042|dbj|BAJ44201.1| NAD-dependent DNA ligase LigA [Escherichia coli DH1] gi|315615662|gb|EFU96294.1| DNA ligase, NAD-dependent [Escherichia coli 3431] gi|323936436|gb|EGB32725.1| DNA ligase [Escherichia coli E1520] gi|323941344|gb|EGB37529.1| DNA ligase [Escherichia coli E482] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|268593162|ref|ZP_06127383.1| DNA ligase, NAD-dependent [Providencia rettgeri DSM 1131] gi|291311208|gb|EFE51661.1| DNA ligase, NAD-dependent [Providencia rettgeri DSM 1131] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E++ L K HH+ Y+ LD P D YD++ +RL ++ Q PEL D P VG Sbjct: 4 KQEIDELKKQLRHHEYQYHVLDAPEIPDVEYDKLMQRLKEIEAQHPELVTSDSPTQRVG 62 >gi|325496534|gb|EGC94393.1| NAD-dependent DNA ligase LigA [Escherichia fergusonii ECD227] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|324009590|gb|EGB78809.1| DNA ligase, NAD-dependent [Escherichia coli MS 57-2] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|91211748|ref|YP_541734.1| NAD-dependent DNA ligase LigA [Escherichia coli UTI89] gi|117624619|ref|YP_853532.1| NAD-dependent DNA ligase LigA [Escherichia coli APEC O1] gi|218559359|ref|YP_002392272.1| NAD-dependent DNA ligase LigA [Escherichia coli S88] gi|237704934|ref|ZP_04535415.1| NAD-dependent DNA ligase LigA [Escherichia sp. 3_2_53FAA] gi|331658566|ref|ZP_08359510.1| DNA ligase, NAD-dependent [Escherichia coli TA206] gi|123084405|sp|Q1R8W1|DNLJ_ECOUT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166215402|sp|A1ADS8|DNLJ_ECOK1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781318|sp|B7MHR5|DNLJ_ECO45 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|91073322|gb|ABE08203.1| DNA ligase [Escherichia coli UTI89] gi|115513743|gb|ABJ01818.1| NAD-dependent DNA ligase LigA [Escherichia coli APEC O1] gi|218366128|emb|CAR03873.1| DNA ligase, NAD(+)-dependent [Escherichia coli S88] gi|226901300|gb|EEH87559.1| NAD-dependent DNA ligase LigA [Escherichia sp. 3_2_53FAA] gi|294491726|gb|ADE90482.1| DNA ligase, NAD-dependent [Escherichia coli IHE3034] gi|307626016|gb|ADN70320.1| NAD-dependent DNA ligase LigA [Escherichia coli UM146] gi|315288164|gb|EFU47564.1| DNA ligase, NAD-dependent [Escherichia coli MS 110-3] gi|323949546|gb|EGB45434.1| DNA ligase [Escherichia coli H252] gi|323955668|gb|EGB51426.1| DNA ligase [Escherichia coli H263] gi|331054231|gb|EGI26258.1| DNA ligase, NAD-dependent [Escherichia coli TA206] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|157161876|ref|YP_001459194.1| NAD-dependent DNA ligase LigA [Escherichia coli HS] gi|253772690|ref|YP_003035521.1| NAD-dependent DNA ligase LigA [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162394|ref|YP_003045502.1| NAD-dependent DNA ligase LigA [Escherichia coli B str. REL606] gi|297517308|ref|ZP_06935694.1| NAD-dependent DNA ligase LigA [Escherichia coli OP50] gi|300928569|ref|ZP_07144093.1| DNA ligase, NAD-dependent [Escherichia coli MS 187-1] gi|190359254|sp|A8A2Q7|DNLJ_ECOHS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157067556|gb|ABV06811.1| DNA ligase, NAD-dependent [Escherichia coli HS] gi|242378018|emb|CAQ32789.1| DNA ligase [Escherichia coli BL21(DE3)] gi|253323734|gb|ACT28336.1| DNA ligase, NAD-dependent [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974295|gb|ACT39966.1| NAD-dependent DNA ligase LigA [Escherichia coli B str. REL606] gi|253978462|gb|ACT44132.1| NAD-dependent DNA ligase LigA [Escherichia coli BL21(DE3)] gi|300463441|gb|EFK26934.1| DNA ligase, NAD-dependent [Escherichia coli MS 187-1] gi|323961212|gb|EGB56824.1| DNA ligase [Escherichia coli H489] gi|323970900|gb|EGB66151.1| DNA ligase [Escherichia coli TA007] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|330912204|gb|EGH40714.1| DNA ligase [Escherichia coli AA86] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|300923365|ref|ZP_07139409.1| DNA ligase, NAD-dependent [Escherichia coli MS 182-1] gi|300420362|gb|EFK03673.1| DNA ligase, NAD-dependent [Escherichia coli MS 182-1] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|82777805|ref|YP_404154.1| NAD-dependent DNA ligase LigA [Shigella dysenteriae Sd197] gi|309784866|ref|ZP_07679499.1| DNA ligase, NAD-dependent [Shigella dysenteriae 1617] gi|123728534|sp|Q32DE2|DNLJ_SHIDS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|81241953|gb|ABB62663.1| DNA ligase [Shigella dysenteriae Sd197] gi|308927236|gb|EFP72710.1| DNA ligase, NAD-dependent [Shigella dysenteriae 1617] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|15802944|ref|NP_288973.1| NAD-dependent DNA ligase LigA [Escherichia coli O157:H7 EDL933] gi|12516784|gb|AAG57530.1|AE005471_7 DNA ligase [Escherichia coli O157:H7 str. EDL933] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|324112923|gb|EGC06899.1| DNA ligase [Escherichia fergusonii B253] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|323170330|gb|EFZ55983.1| DNA ligase, NAD-dependent [Escherichia coli LT-68] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|320185101|gb|EFW59881.1| DNA ligase [Shigella flexneri CDC 796-83] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|146615|gb|AAA24071.1| lig peptide [Escherichia coli] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|74312947|ref|YP_311366.1| NAD-dependent DNA ligase LigA [Shigella sonnei Ss046] gi|123732314|sp|Q3YZD1|DNLJ_SHISS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|73856424|gb|AAZ89131.1| DNA ligase [Shigella sonnei Ss046] gi|323169148|gb|EFZ54825.1| DNA ligase, NAD-dependent [Shigella sonnei 53G] Length = 671 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|330808456|ref|YP_004352918.1| DNA ligase (NAD(+)) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376564|gb|AEA67914.1| DNA ligase (NAD(+)) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 785 Score = 109 bits (274), Expect = 8e-23, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L H Y+ LD+P D YDR+ L AL+EQ PEL D P VG Sbjct: 4 VETRIQQLRTELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEEQHPELVTSDSPTQRVG 63 >gi|320196260|gb|EFW70884.1| DNA ligase [Escherichia coli WV_060327] Length = 671 Score = 109 bits (274), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|331648073|ref|ZP_08349163.1| DNA ligase, NAD-dependent [Escherichia coli M605] gi|331042933|gb|EGI15073.1| DNA ligase, NAD-dependent [Escherichia coli M605] Length = 671 Score = 109 bits (274), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|26248787|ref|NP_754827.1| NAD-dependent DNA ligase LigA [Escherichia coli CFT073] gi|170680446|ref|YP_001744602.1| NAD-dependent DNA ligase LigA [Escherichia coli SMS-3-5] gi|227887457|ref|ZP_04005262.1| NAD-dependent DNA ligase LigA [Escherichia coli 83972] gi|300981618|ref|ZP_07175608.1| DNA ligase, NAD-dependent [Escherichia coli MS 45-1] gi|301046300|ref|ZP_07193464.1| DNA ligase, NAD-dependent [Escherichia coli MS 185-1] gi|81475373|sp|Q8FFC1|DNLJ_ECOL6 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781328|sp|B1LMK5|DNLJ_ECOSM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|26109193|gb|AAN81395.1|AE016764_77 DNA ligase [Escherichia coli CFT073] gi|170518164|gb|ACB16342.1| DNA ligase, NAD-dependent [Escherichia coli SMS-3-5] gi|227835807|gb|EEJ46273.1| NAD-dependent DNA ligase LigA [Escherichia coli 83972] gi|300301715|gb|EFJ58100.1| DNA ligase, NAD-dependent [Escherichia coli MS 185-1] gi|300408962|gb|EFJ92500.1| DNA ligase, NAD-dependent [Escherichia coli MS 45-1] gi|307554453|gb|ADN47228.1| DNA ligase [Escherichia coli ABU 83972] gi|315293473|gb|EFU52825.1| DNA ligase, NAD-dependent [Escherichia coli MS 153-1] gi|323977408|gb|EGB72494.1| DNA ligase [Escherichia coli TW10509] Length = 671 Score = 109 bits (274), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|110642595|ref|YP_670325.1| NAD-dependent DNA ligase LigA [Escherichia coli 536] gi|191174600|ref|ZP_03036093.1| DNA ligase, NAD-dependent [Escherichia coli F11] gi|300997757|ref|ZP_07181842.1| DNA ligase, NAD-dependent [Escherichia coli MS 200-1] gi|306814500|ref|ZP_07448662.1| NAD-dependent DNA ligase LigA [Escherichia coli NC101] gi|122958158|sp|Q0TF55|DNLJ_ECOL5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|110344187|gb|ABG70424.1| DNA ligase [Escherichia coli 536] gi|190905126|gb|EDV64772.1| DNA ligase, NAD-dependent [Escherichia coli F11] gi|222034142|emb|CAP76883.1| DNA ligase [Escherichia coli LF82] gi|300304141|gb|EFJ58661.1| DNA ligase, NAD-dependent [Escherichia coli MS 200-1] gi|305851894|gb|EFM52346.1| NAD-dependent DNA ligase LigA [Escherichia coli NC101] gi|312947007|gb|ADR27834.1| NAD-dependent DNA ligase LigA [Escherichia coli O83:H1 str. NRG 857C] gi|324011127|gb|EGB80346.1| DNA ligase, NAD-dependent [Escherichia coli MS 60-1] Length = 671 Score = 109 bits (274), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|157156100|ref|YP_001463741.1| NAD-dependent DNA ligase LigA [Escherichia coli E24377A] gi|193066723|ref|ZP_03047750.1| DNA ligase, NAD-dependent [Escherichia coli E22] gi|194430461|ref|ZP_03062941.1| DNA ligase, NAD-dependent [Escherichia coli B171] gi|209919893|ref|YP_002293977.1| NAD-dependent DNA ligase LigA [Escherichia coli SE11] gi|218554944|ref|YP_002387857.1| NAD-dependent DNA ligase LigA [Escherichia coli IAI1] gi|218696047|ref|YP_002403714.1| NAD-dependent DNA ligase LigA [Escherichia coli 55989] gi|256017438|ref|ZP_05431303.1| NAD-dependent DNA ligase LigA [Shigella sp. D9] gi|260845052|ref|YP_003222830.1| DNA ligase LigA, NAD(+)-dependent [Escherichia coli O103:H2 str. 12009] gi|260856513|ref|YP_003230404.1| DNA ligase LigA, NAD(+)-dependent [Escherichia coli O26:H11 str. 11368] gi|260869108|ref|YP_003235510.1| DNA ligase LigA, NAD(+)-dependent [Escherichia coli O111:H- str. 11128] gi|293446772|ref|ZP_06663194.1| DNA ligase [Escherichia coli B088] gi|300817349|ref|ZP_07097566.1| DNA ligase, NAD-dependent [Escherichia coli MS 107-1] gi|300820921|ref|ZP_07101071.1| DNA ligase, NAD-dependent [Escherichia coli MS 119-7] gi|300903139|ref|ZP_07121073.1| DNA ligase, NAD-dependent [Escherichia coli MS 84-1] gi|300921341|ref|ZP_07137704.1| DNA ligase, NAD-dependent [Escherichia coli MS 115-1] gi|301306250|ref|ZP_07212323.1| DNA ligase, NAD-dependent [Escherichia coli MS 124-1] gi|301328910|ref|ZP_07221944.1| DNA ligase, NAD-dependent [Escherichia coli MS 78-1] gi|307312589|ref|ZP_07592222.1| DNA ligase, NAD-dependent [Escherichia coli W] gi|309794543|ref|ZP_07688966.1| DNA ligase, NAD-dependent [Escherichia coli MS 145-7] gi|331669152|ref|ZP_08370000.1| DNA ligase, NAD-dependent [Escherichia coli TA271] gi|331678399|ref|ZP_08379074.1| DNA ligase, NAD-dependent [Escherichia coli H591] gi|190359253|sp|A7ZPL2|DNLJ_ECO24 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781319|sp|B7LCF6|DNLJ_ECO55 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781323|sp|B7M6S1|DNLJ_ECO8A RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781327|sp|B6I4Y8|DNLJ_ECOSE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157078130|gb|ABV17838.1| DNA ligase, NAD-dependent [Escherichia coli E24377A] gi|192925627|gb|EDV80294.1| DNA ligase, NAD-dependent [Escherichia coli E22] gi|194411494|gb|EDX27836.1| DNA ligase, NAD-dependent [Escherichia coli B171] gi|209913152|dbj|BAG78226.1| DNA ligase [Escherichia coli SE11] gi|218352779|emb|CAU98567.1| DNA ligase, NAD(+)-dependent [Escherichia coli 55989] gi|218361712|emb|CAQ99309.1| DNA ligase, NAD(+)-dependent [Escherichia coli IAI1] gi|257755162|dbj|BAI26664.1| DNA ligase LigA, NAD(+)-dependent [Escherichia coli O26:H11 str. 11368] gi|257760199|dbj|BAI31696.1| DNA ligase LigA, NAD(+)-dependent [Escherichia coli O103:H2 str. 12009] gi|257765464|dbj|BAI36959.1| DNA ligase LigA, NAD(+)-dependent [Escherichia coli O111:H- str. 11128] gi|291323602|gb|EFE63030.1| DNA ligase [Escherichia coli B088] gi|300404835|gb|EFJ88373.1| DNA ligase, NAD-dependent [Escherichia coli MS 84-1] gi|300411729|gb|EFJ95039.1| DNA ligase, NAD-dependent [Escherichia coli MS 115-1] gi|300526674|gb|EFK47743.1| DNA ligase, NAD-dependent [Escherichia coli MS 119-7] gi|300529975|gb|EFK51037.1| DNA ligase, NAD-dependent [Escherichia coli MS 107-1] gi|300838493|gb|EFK66253.1| DNA ligase, NAD-dependent [Escherichia coli MS 124-1] gi|300844712|gb|EFK72472.1| DNA ligase, NAD-dependent [Escherichia coli MS 78-1] gi|306907512|gb|EFN38016.1| DNA ligase, NAD-dependent [Escherichia coli W] gi|308121999|gb|EFO59261.1| DNA ligase, NAD-dependent [Escherichia coli MS 145-7] gi|315061736|gb|ADT76063.1| DNA ligase, NAD(+)-dependent [Escherichia coli W] gi|315256427|gb|EFU36395.1| DNA ligase, NAD-dependent [Escherichia coli MS 85-1] gi|320199974|gb|EFW74563.1| DNA ligase [Escherichia coli EC4100B] gi|323156318|gb|EFZ42476.1| DNA ligase, NAD-dependent [Escherichia coli EPECa14] gi|323159458|gb|EFZ45441.1| DNA ligase, NAD-dependent [Escherichia coli E128010] gi|323177463|gb|EFZ63051.1| DNA ligase, NAD-dependent [Escherichia coli 1180] gi|323184284|gb|EFZ69660.1| DNA ligase, NAD-dependent [Escherichia coli 1357] gi|323377683|gb|ADX49951.1| DNA ligase, NAD-dependent [Escherichia coli KO11] gi|323944634|gb|EGB40701.1| DNA ligase [Escherichia coli H120] gi|324020175|gb|EGB89394.1| DNA ligase, NAD-dependent [Escherichia coli MS 117-3] gi|324118125|gb|EGC12023.1| DNA ligase [Escherichia coli E1167] gi|331064346|gb|EGI36257.1| DNA ligase, NAD-dependent [Escherichia coli TA271] gi|331074859|gb|EGI46179.1| DNA ligase, NAD-dependent [Escherichia coli H591] gi|332100791|gb|EGJ04137.1| NAD-dependent DNA ligase LigA [Shigella sp. D9] Length = 671 Score = 109 bits (274), Expect = 8e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|15832537|ref|NP_311310.1| NAD-dependent DNA ligase LigA [Escherichia coli O157:H7 str. Sakai] gi|168768500|ref|ZP_02793507.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. EC4486] gi|168778374|ref|ZP_02803381.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. EC4076] gi|208813694|ref|ZP_03255023.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. EC4045] gi|208821178|ref|ZP_03261498.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. EC4042] gi|209399429|ref|YP_002271890.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. EC4115] gi|217326968|ref|ZP_03443051.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. TW14588] gi|254794365|ref|YP_003079202.1| NAD-dependent DNA ligase LigA [Escherichia coli O157:H7 str. TW14359] gi|261223146|ref|ZP_05937427.1| DNA ligase, NAD(+)-dependent [Escherichia coli O157:H7 str. FRIK2000] gi|261259301|ref|ZP_05951834.1| DNA ligase, NAD(+)-dependent [Escherichia coli O157:H7 str. FRIK966] gi|291283640|ref|YP_003500458.1| DNA ligase [Escherichia coli O55:H7 str. CB9615] gi|166215595|sp|Q8XBL5|DNLJ_ECO57 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781320|sp|B5YZV8|DNLJ_ECO5E RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|13362753|dbj|BAB36706.1| DNA ligase [Escherichia coli O157:H7 str. Sakai] gi|189003243|gb|EDU72229.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. EC4076] gi|189362250|gb|EDU80669.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. EC4486] gi|208734971|gb|EDZ83658.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. EC4045] gi|208741301|gb|EDZ88983.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. EC4042] gi|209160829|gb|ACI38262.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. EC4115] gi|209764248|gb|ACI80436.1| DNA ligase [Escherichia coli] gi|209764250|gb|ACI80437.1| DNA ligase [Escherichia coli] gi|209764252|gb|ACI80438.1| DNA ligase [Escherichia coli] gi|209764256|gb|ACI80440.1| DNA ligase [Escherichia coli] gi|217319335|gb|EEC27760.1| DNA ligase, NAD-dependent [Escherichia coli O157:H7 str. TW14588] gi|254593765|gb|ACT73126.1| DNA ligase, NAD(+)-dependent [Escherichia coli O157:H7 str. TW14359] gi|290763513|gb|ADD57474.1| DNA ligase [Escherichia coli O55:H7 str. CB9615] gi|320188751|gb|EFW63410.1| DNA ligase [Escherichia coli O157:H7 str. EC1212] gi|320640925|gb|EFX10409.1| NAD-dependent DNA ligase LigA [Escherichia coli O157:H7 str. G5101] gi|320646206|gb|EFX15133.1| NAD-dependent DNA ligase LigA [Escherichia coli O157:H- str. 493-89] gi|320651712|gb|EFX20092.1| NAD-dependent DNA ligase LigA [Escherichia coli O157:H- str. H 2687] gi|320657097|gb|EFX24906.1| NAD-dependent DNA ligase LigA [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662857|gb|EFX30185.1| NAD-dependent DNA ligase LigA [Escherichia coli O55:H7 str. USDA 5905] gi|320667743|gb|EFX34654.1| NAD-dependent DNA ligase LigA [Escherichia coli O157:H7 str. LSU-61] gi|326340214|gb|EGD64018.1| DNA ligase [Escherichia coli O157:H7 str. 1125] gi|326344216|gb|EGD67977.1| DNA ligase [Escherichia coli O157:H7 str. 1044] Length = 671 Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|315634861|ref|ZP_07890143.1| NAD-dependent DNA ligase LigA [Aggregatibacter segnis ATCC 33393] gi|315476413|gb|EFU67163.1| NAD-dependent DNA ligase LigA [Aggregatibacter segnis ATCC 33393] Length = 671 Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 33/60 (55%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K +H+ Y+ LDDP D YDR+ +L AL++Q PEL D P VG Sbjct: 5 IQQQIDDLRKTLRYHEYQYHVLDDPQIPDSEYDRLFHQLKALEQQHPELITADSPTQRVG 64 >gi|209764254|gb|ACI80439.1| DNA ligase [Escherichia coli] Length = 671 Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|15642875|ref|NP_227916.1| DNA ligase [Thermotoga maritima MSB8] gi|7674016|sp|Q9WXV5|DNLJ_THEMA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|4980590|gb|AAD35194.1|AE001696_8 DNA ligase [Thermotoga maritima MSB8] Length = 688 Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 34/63 (53%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 E + EVE L + +H YY L+DP+ TD YDR+ RL L+ +PEL D P Sbjct: 7 PKEVIEEVERLREEIEYHNYRYYVLNDPVITDEEYDRLMRRLIELERMYPELVTPDSPTQ 66 Query: 116 TVG 118 VG Sbjct: 67 RVG 69 >gi|260598800|ref|YP_003211371.1| NAD-dependent DNA ligase LigA [Cronobacter turicensis z3032] gi|260217977|emb|CBA32625.1| DNA ligase [Cronobacter turicensis z3032] Length = 672 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L AL+E PEL D P Sbjct: 2 ESIEEKLTQLRTTLRHHEFLYHVMDAPEVPDAEYDRLMRELRALEEAHPELVTPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|319407493|emb|CBI81141.1| DNA ligase [Bartonella sp. 1-1C] Length = 725 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + +L+ EA E+E+L K H Y+R D P +D YD + R + ++ FPEL Sbjct: 6 IKNLTALEAASELEWLAKEIARHDVLYHRDDQPEISDAEYDALCRRNEEIEALFPELIRA 65 Query: 111 DHPWNTVG 118 D P + +G Sbjct: 66 DSPSSKIG 73 >gi|291544905|emb|CBL18014.1| DNA ligase, NAD-dependent [Ruminococcus sp. 18P13] Length = 660 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + +A + + L K H YY LD P D YD + L A++ ++P+L P Sbjct: 1 MDFEQAKLRLAQLTKEIEQHNYAYYVLDAPTIEDCDYDALMRELKAIETEYPQLLSPHSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|323188282|gb|EFZ73575.1| DNA ligase, NAD-dependent [Escherichia coli RN587/1] Length = 671 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLIELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|170767420|ref|ZP_02901873.1| DNA ligase, NAD-dependent [Escherichia albertii TW07627] gi|170123754|gb|EDS92685.1| DNA ligase, NAD-dependent [Escherichia albertii TW07627] Length = 671 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQKLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|215487666|ref|YP_002330097.1| NAD-dependent DNA ligase LigA [Escherichia coli O127:H6 str. E2348/69] gi|312967700|ref|ZP_07781915.1| DNA ligase, NAD-dependent [Escherichia coli 2362-75] gi|254781317|sp|B7UGB2|DNLJ_ECO27 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|215265738|emb|CAS10145.1| DNA ligase, NAD(+)-dependent [Escherichia coli O127:H6 str. E2348/69] gi|312287897|gb|EFR15802.1| DNA ligase, NAD-dependent [Escherichia coli 2362-75] Length = 671 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLIELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|320354711|ref|YP_004196050.1| NAD-dependent DNA ligase [Desulfobulbus propionicus DSM 2032] gi|320123213|gb|ADW18759.1| DNA ligase, NAD-dependent [Desulfobulbus propionicus DSM 2032] Length = 670 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 36/65 (55%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + KG A +E L H YY LDDP+ +DG YD + L AL++++PEL D P Sbjct: 1 MDKGRAADRLEELRGQLRFHAHRYYVLDDPIISDGEYDALFRELLALEQEYPELVTADSP 60 Query: 114 WNTVG 118 + VG Sbjct: 61 SHRVG 65 >gi|156933031|ref|YP_001436947.1| NAD-dependent DNA ligase LigA [Cronobacter sakazakii ATCC BAA-894] gi|166215403|sp|A7MKW4|DNLJ_ENTS8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|156531285|gb|ABU76111.1| hypothetical protein ESA_00834 [Cronobacter sakazakii ATCC BAA-894] Length = 672 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L AL+E PEL D P Sbjct: 2 ESIEEKLTQLRTTLRHHEFLYHVMDAPEVPDAEYDRLMRELRALEEAHPELVTPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|261884935|ref|ZP_06008974.1| NAD-dependent DNA ligase LigA [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 195 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EA E+E L + HH + Y+ D P +D YD + R +A++ FP L + Sbjct: 6 VEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRD 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPSRRVG 73 >gi|187477571|ref|YP_785595.1| DNA ligase [Bordetella avium 197N] gi|123752160|sp|Q2KUU5|DNLJ_BORA1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|115422157|emb|CAJ48681.1| DNA ligase [Bordetella avium 197N] Length = 695 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 27/63 (42%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + A + L H YY D+P TD YD + L AL+ Q PEL D P Sbjct: 5 EQAAREQAARLRAEIAQHNIRYYVYDEPSITDADYDALMRELMALEAQHPELVTPDSPTQ 64 Query: 116 TVG 118 VG Sbjct: 65 RVG 67 >gi|290476106|ref|YP_003469005.1| DNA ligase [Xenorhabdus bovienii SS-2004] gi|289175438|emb|CBJ82241.1| DNA ligase [Xenorhabdus bovienii SS-2004] Length = 672 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 29/62 (46%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L HH+ Y+ +D P D YDR+ L L+EQ PEL D P Sbjct: 2 ESIIEKINKLRATLRHHEYLYHVMDAPEIPDAEYDRLLRELKVLEEQHPELITADSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|126462048|ref|YP_001043162.1| DNA ligase, NAD-dependent [Rhodobacter sphaeroides ATCC 17029] gi|166216229|sp|A3PJ74|DNLJ_RHOS1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|126103712|gb|ABN76390.1| DNA ligase, NAD-dependent [Rhodobacter sphaeroides ATCC 17029] Length = 704 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 36/74 (48%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + + V L++ EA E+ L + Y+ D P +D YD + R A++EQF Sbjct: 1 MQDERPVDQLTEAEAATELARLAEAIEAANTAYHTHDAPQISDADYDALKLRNRAIEEQF 60 Query: 105 PELFDEDHPWNTVG 118 PEL D P + VG Sbjct: 61 PELRRSDSPSDRVG 74 >gi|319404500|emb|CBI78105.1| DNA ligase [Bartonella rochalimae ATCC BAA-1498] Length = 725 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + +L+ EA E+E+L K H Y+R D P +D YD + R + ++ FPEL Sbjct: 6 IKNLTALEAASELEWLAKEIARHDVLYHRDDQPEISDAEYDALCRRNEEIEALFPELIRA 65 Query: 111 DHPWNTVG 118 D P + +G Sbjct: 66 DSPSSKIG 73 >gi|319405996|emb|CBI79627.1| DNA ligase [Bartonella sp. AR 15-3] Length = 718 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + +L+ EA E+E+L K H Y+R D P +D YD + R + ++ FPEL Sbjct: 6 IKNLTALEAEGELEWLAKEIARHDVLYHRDDQPEISDAEYDALRRRNEEIEALFPELVRV 65 Query: 111 DHPWNTVG 118 D P + +G Sbjct: 66 DSPSSKIG 73 >gi|269127766|ref|YP_003301136.1| DNA ligase, NAD-dependent [Thermomonospora curvata DSM 43183] gi|268312724|gb|ACY99098.1| DNA ligase, NAD-dependent [Thermomonospora curvata DSM 43183] Length = 722 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 28/64 (43%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + EA L + YY LD P +D YDR+ L L+E+ PEL D P Sbjct: 7 TPTEAARRHAELSREIDEANYRYYVLDRPTLSDAEYDRLMRELRELEERHPELVTPDSPT 66 Query: 115 NTVG 118 VG Sbjct: 67 QRVG 70 >gi|27262356|gb|AAN87459.1| NAD-dependent DNA ligase [Heliobacillus mobilis] Length = 677 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Query: 43 SWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQE 102 S L + + ++ EA + V+ L +I HH+ YY LD P TD YD + L A+++ Sbjct: 2 SALMVSPDLPK-NRVEAEVRVKELREIIRHHEYRYYVLDAPEITDADYDALMRELQAIED 60 Query: 103 QFPELFDEDHPWNTVG 118 +PEL + D P VG Sbjct: 61 TYPELVEADSPTRRVG 76 >gi|309792382|ref|ZP_07686850.1| DNA ligase, NAD-dependent [Oscillochloris trichoides DG6] gi|308225603|gb|EFO79363.1| DNA ligase, NAD-dependent [Oscillochloris trichoides DG6] Length = 674 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ E + +E L + H YY LDDP +D YD + L L+ PEL D P Sbjct: 1 MAESELVQRIERLRALLREHNYRYYVLDDPNVSDAEYDALMRELRHLEATHPELCSPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|325293451|ref|YP_004279315.1| DNA ligase [Agrobacterium sp. H13-3] gi|325061304|gb|ADY64995.1| DNA ligase [Agrobacterium sp. H13-3] Length = 724 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 34/73 (46%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 V +L++ EA E+ +L H Y+ D P +D YD + R DA++ FP Sbjct: 4 DQIPVENLTELEASSELAFLAAELARHDALYHGKDAPEISDADYDALKRRNDAIEAAFPA 63 Query: 107 LFDEDHPWNTVGY 119 L D P VG+ Sbjct: 64 LVRADSPSKKVGF 76 >gi|15889366|ref|NP_355047.1| NAD-dependent DNA ligase LigA [Agrobacterium tumefaciens str. C58] gi|166215388|sp|A9CIB3|DNLJ_AGRT5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|15157212|gb|AAK87832.1| DNA ligase [Agrobacterium tumefaciens str. C58] Length = 724 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 34/73 (46%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 V +L++ EA E+ +L H Y+ D P +D YD + R DA++ FP Sbjct: 4 DQIPVENLTELEASSELAFLAAELARHDALYHGKDAPEISDADYDALKRRNDAIEAAFPA 63 Query: 107 LFDEDHPWNTVGY 119 L D P VG+ Sbjct: 64 LVRADSPSKKVGF 76 >gi|320180401|gb|EFW55332.1| DNA ligase [Shigella boydii ATCC 9905] Length = 671 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELCELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|239501241|ref|ZP_04660551.1| DNA ligase, NAD-dependent [Acinetobacter baumannii AB900] Length = 678 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + ++ L+++ H YY +D P +D YD + +L AL+EQ+PEL D P Sbjct: 1 MAITSVIEQMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPELVQADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TTKVG 65 >gi|169797009|ref|YP_001714802.1| DNA ligase [Acinetobacter baumannii AYE] gi|169149936|emb|CAM87830.1| DNA ligase [Acinetobacter baumannii AYE] Length = 691 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + ++ L+++ H YY +D P +D YD + +L AL+EQ+PEL D P Sbjct: 14 MAITSVIEQMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPELVQADSP 73 Query: 114 WNTVG 118 VG Sbjct: 74 TTKVG 78 >gi|332092973|gb|EGI98039.1| DNA ligase, NAD-dependent [Shigella boydii 3594-74] Length = 671 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELCELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|237732406|ref|ZP_04562887.1| NAD-dependent DNA ligase LigA [Citrobacter sp. 30_2] gi|226907945|gb|EEH93863.1| NAD-dependent DNA ligase LigA [Citrobacter sp. 30_2] Length = 671 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ Q PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMCELRELEAQHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|254479199|ref|ZP_05092546.1| NAD-dependent DNA ligase adenylation domain subfamily [Carboxydibrachium pacificum DSM 12653] gi|214034862|gb|EEB75589.1| NAD-dependent DNA ligase adenylation domain subfamily [Carboxydibrachium pacificum DSM 12653] Length = 271 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + EA +E L + +H YY LD P +D YD + L L+E++PE D P Sbjct: 15 MDREEARKRIEELREKINYHNYRYYVLDQPEISDYEYDMLMRELIELEEKYPEFKTPDSP 74 Query: 114 WNTVG 118 VG Sbjct: 75 SQRVG 79 >gi|213156587|ref|YP_002318248.1| DNA ligase, NAD-dependent [Acinetobacter baumannii AB0057] gi|215484469|ref|YP_002326704.1| DNA ligase, NAD-dependent [Acinetobacter baumannii AB307-0294] gi|294838566|ref|ZP_06783249.1| DNA ligase, NAD-dependent [Acinetobacter sp. 6013113] gi|294840420|ref|ZP_06785103.1| DNA ligase, NAD-dependent [Acinetobacter sp. 6014059] gi|294859446|ref|ZP_06797215.1| DNA ligase, NAD-dependent [Acinetobacter sp. 6013150] gi|301347734|ref|ZP_07228475.1| DNA ligase, NAD-dependent [Acinetobacter baumannii AB056] gi|301512482|ref|ZP_07237719.1| DNA ligase, NAD-dependent [Acinetobacter baumannii AB058] gi|301594386|ref|ZP_07239394.1| DNA ligase, NAD-dependent [Acinetobacter baumannii AB059] gi|221222446|sp|A3M2U3|DNLJ_ACIBT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254778154|sp|B7GZ71|DNLJ_ACIB3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254778155|sp|B7I790|DNLJ_ACIB5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781253|sp|B0V8E4|DNLJ_ACIBY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|193076578|gb|ABO11237.2| DNA ligase [Acinetobacter baumannii ATCC 17978] gi|213055747|gb|ACJ40649.1| DNA ligase, NAD-dependent [Acinetobacter baumannii AB0057] gi|213986610|gb|ACJ56909.1| DNA ligase, NAD-dependent [Acinetobacter baumannii AB307-0294] Length = 678 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + ++ L+++ H YY +D P +D YD + +L AL+EQ+PEL D P Sbjct: 1 MAITSVIEQMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPELVQADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TTKVG 65 >gi|116626792|ref|YP_828948.1| DNA ligase, NAD-dependent [Candidatus Solibacter usitatus Ellin6076] gi|122251346|sp|Q01NV7|DNLJ_SOLUE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116229954|gb|ABJ88663.1| DNA ligase, NAD-dependent [Candidatus Solibacter usitatus Ellin6076] Length = 662 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E+E L + HH+ YY LD P TD YD + RL L+ + P+L D P VG Sbjct: 5 AVEIEKLREQLHHHEHLYYVLDKPEITDAEYDALMHRLQELETKHPDLLTPDSPTQRVG 63 >gi|281412160|ref|YP_003346239.1| DNA ligase, NAD-dependent [Thermotoga naphthophila RKU-10] gi|281373263|gb|ADA66825.1| DNA ligase, NAD-dependent [Thermotoga naphthophila RKU-10] Length = 688 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 34/63 (53%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 E + EVE L + +H YY L+DP+ TD YD++ RL L+ +PEL D P Sbjct: 7 PKEVIEEVERLREEIEYHNYRYYVLNDPVITDEEYDKLMRRLIELERMYPELVTPDSPTQ 66 Query: 116 TVG 118 VG Sbjct: 67 RVG 69 >gi|82544871|ref|YP_408818.1| NAD-dependent DNA ligase LigA [Shigella boydii Sb227] gi|123741957|sp|Q31Y68|DNLJ_SHIBS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|81246282|gb|ABB66990.1| DNA ligase [Shigella boydii Sb227] Length = 671 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELCELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|290508381|ref|ZP_06547752.1| DNA ligase, NAD-dependent [Klebsiella sp. 1_1_55] gi|289777775|gb|EFD85772.1| DNA ligase, NAD-dependent [Klebsiella sp. 1_1_55] Length = 671 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q PEL D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEVPDAEYDRLMRELRELESQHPELITPDSPTQRVG 63 >gi|206579402|ref|YP_002237241.1| DNA ligase, NAD-dependent [Klebsiella pneumoniae 342] gi|288934177|ref|YP_003438236.1| DNA ligase, NAD-dependent [Klebsiella variicola At-22] gi|254781350|sp|B5XVT4|DNLJ_KLEP3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|206568460|gb|ACI10236.1| DNA ligase, NAD-dependent [Klebsiella pneumoniae 342] gi|288888906|gb|ADC57224.1| DNA ligase, NAD-dependent [Klebsiella variicola At-22] Length = 671 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q PEL D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEVPDAEYDRLMRELRELESQHPELITPDSPTQRVG 63 >gi|37525354|ref|NP_928698.1| NAD-dependent DNA ligase LigA [Photorhabdus luminescens subsp. laumondii TTO1] gi|81416713|sp|Q7MBH2|DNLJ_PHOLL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|36784781|emb|CAE13691.1| DNA ligase (polydeoxyribonucleotide synthase [NAD+]) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 672 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L HH+ Y+ +D P D YDR+ + L L+EQ+PEL D P +G Sbjct: 5 AQQIEKLRTTLRHHEYLYHVMDAPEIPDAEYDRLMQELQDLEEQYPELITSDSPTQRIG 63 >gi|288941063|ref|YP_003443303.1| DNA ligase, NAD-dependent [Allochromatium vinosum DSM 180] gi|288896435|gb|ADC62271.1| DNA ligase, NAD-dependent [Allochromatium vinosum DSM 180] Length = 696 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 28/65 (43%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ +E L +H YY LDDP D YDR+ L L+ + P L D P Sbjct: 1 MTSSAITQRIEALRAEIRYHNHRYYVLDDPEIPDAEYDRLFAELQQLEAEHPALITPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|238759468|ref|ZP_04620632.1| DNA ligase [Yersinia aldovae ATCC 35236] gi|238702365|gb|EEP94918.1| DNA ligase [Yersinia aldovae ATCC 35236] Length = 670 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P Sbjct: 2 ESIIQQINQLRTSLRHHEHLYHVLDAPEIPDAEYDRLMQQLRELEAQHPELVTNDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|147669216|ref|YP_001214034.1| DNA ligase, NAD-dependent [Dehalococcoides sp. BAV1] gi|190359250|sp|A5FRL4|DNLJ_DEHSB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|146270164|gb|ABQ17156.1| DNA ligase, NAD-dependent [Dehalococcoides sp. BAV1] Length = 680 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 30/58 (51%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 IEVE L + H + YY D+P +D YD + RL L+E PEL D P VG Sbjct: 9 IEVENLRREINRHNQLYYVQDNPEISDAQYDTLIRRLKELEEAHPELVTPDSPTQRVG 66 >gi|332162521|ref|YP_004299098.1| NAD-dependent DNA ligase LigA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606605|emb|CBY28103.1| DNA ligase [Yersinia enterocolitica subsp. palearctica Y11] gi|325666751|gb|ADZ43395.1| NAD-dependent DNA ligase LigA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860741|emb|CBX71032.1| DNA ligase [Yersinia enterocolitica W22703] Length = 672 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P Sbjct: 2 ESIIQQINQLRTSLRHHEHLYHVLDAPEIPDAEYDRLMQQLRELEAQHPELITNDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|148269959|ref|YP_001244419.1| DNA ligase, NAD-dependent [Thermotoga petrophila RKU-1] gi|170288644|ref|YP_001738882.1| DNA ligase, NAD-dependent [Thermotoga sp. RQ2] gi|190359298|sp|A5IKX0|DNLJ_THEP1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781442|sp|B1LA51|DNLJ_THESQ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|147735503|gb|ABQ46843.1| DNA ligase, NAD-dependent [Thermotoga petrophila RKU-1] gi|170176147|gb|ACB09199.1| DNA ligase, NAD-dependent [Thermotoga sp. RQ2] Length = 688 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 34/63 (53%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 E + EVE L + +H YY L+DP+ TD YD++ RL L+ +PEL D P Sbjct: 7 PKEVIEEVERLREEIEYHNYRYYVLNDPVITDEEYDKLMRRLIELERMYPELVTPDSPTQ 66 Query: 116 TVG 118 VG Sbjct: 67 RVG 69 >gi|74316642|ref|YP_314382.1| NAD-dependent DNA ligase [Thiobacillus denitrificans ATCC 25259] gi|123745545|sp|Q3SL40|DNLJ_THIDA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|74056137|gb|AAZ96577.1| NAD-dependent DNA ligase [Thiobacillus denitrificans ATCC 25259] Length = 686 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 28/65 (43%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + L + H YY LD P D YDR+ L+AL+ PEL D P Sbjct: 1 MADRDVQARAAALRREIERHNYAYYVLDAPTIPDAEYDRLYHELEALEAAHPELVAADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TRRVG 65 >gi|161502427|ref|YP_001569539.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|190359281|sp|A9MIG0|DNLJ_SALAR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|160863774|gb|ABX20397.1| hypothetical protein SARI_00461 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 671 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L AL+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRALEAQRPDLITPDSPTQRVG 63 >gi|260555699|ref|ZP_05827919.1| DNA ligase, NAD-dependent [Acinetobacter baumannii ATCC 19606] gi|260410610|gb|EEX03908.1| DNA ligase, NAD-dependent [Acinetobacter baumannii ATCC 19606] Length = 691 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + ++ L+++ H YY +D P +D YD + +L AL+EQ+PEL D P Sbjct: 14 MAITSVIEQMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPELVQADSP 73 Query: 114 WNTVG 118 VG Sbjct: 74 TMKVG 78 >gi|268316781|ref|YP_003290500.1| DNA ligase, NAD-dependent [Rhodothermus marinus DSM 4252] gi|262334315|gb|ACY48112.1| DNA ligase, NAD-dependent [Rhodothermus marinus DSM 4252] Length = 712 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Query: 29 TLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDG 88 T EA+ L L + + + + ++ + EA L ++ H YY LD+PL D Sbjct: 9 TAEARLLEATHTLLQTV-RQRDLEAIDRKEAEALAARLREVLNQHAYRYYVLDNPLIPDA 67 Query: 89 LYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YD + + L L+ +FPEL D P VG Sbjct: 68 DYDLLMQALRKLEARFPELVTPDSPTQRVG 97 >gi|123441550|ref|YP_001005536.1| NAD-dependent DNA ligase LigA [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166216254|sp|A1JLA4|DNLJ_YERE8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|122088511|emb|CAL11304.1| DNA ligase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 672 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P Sbjct: 2 ESIIQQINQLRTSLRHHEHLYHVLDAPEIPDAEYDRLMQQLRELEAQHPELITNDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|1352292|sp|P49421|DNLJ_RHOMR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|607820|gb|AAA93198.1| DNA ligase [Rhodothermus marinus] Length = 712 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Query: 29 TLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDG 88 T EA+ L L + + + + ++ + EA L ++ H YY LD+PL D Sbjct: 9 TAEARLLEATHTLLQTV-RQRDLEAIDRKEAEALAARLREVLNQHAYRYYVLDNPLIPDA 67 Query: 89 LYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YD + + L L+ +FPEL D P VG Sbjct: 68 DYDLLMQALRKLEARFPELVTPDSPTQRVG 97 >gi|57234606|ref|YP_181338.1| DNA ligase, NAD-dependent [Dehalococcoides ethenogenes 195] gi|123759715|sp|Q3Z8W1|DNLJ_DEHE1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|57225054|gb|AAW40111.1| DNA ligase, NAD-dependent [Dehalococcoides ethenogenes 195] Length = 677 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+E L + H + YY D+P +D YD + RL L+E PEL D P VG Sbjct: 5 RTEIENLRREINRHNQLYYVQDNPEISDSEYDALLRRLKELEEAHPELVTADSPTQRVG 63 >gi|24113756|ref|NP_708266.1| NAD-dependent DNA ligase LigA [Shigella flexneri 2a str. 301] gi|30063805|ref|NP_837976.1| NAD-dependent DNA ligase LigA [Shigella flexneri 2a str. 2457T] gi|110806352|ref|YP_689872.1| NAD-dependent DNA ligase LigA [Shigella flexneri 5 str. 8401] gi|81723177|sp|Q83K81|DNLJ_SHIFL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|122366427|sp|Q0T298|DNLJ_SHIF8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|24052834|gb|AAN43973.1| DNA ligase [Shigella flexneri 2a str. 301] gi|30042060|gb|AAP17786.1| DNA ligase [Shigella flexneri 2a str. 2457T] gi|110615900|gb|ABF04567.1| DNA ligase [Shigella flexneri 5 str. 8401] gi|281601828|gb|ADA74812.1| DNA ligase, NAD-dependent [Shigella flexneri 2002017] gi|313650866|gb|EFS15266.1| DNA ligase, NAD-dependent [Shigella flexneri 2a str. 2457T] Length = 671 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLCHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|90021526|ref|YP_527353.1| DNA ligase (NAD+) [Saccharophagus degradans 2-40] gi|123090491|sp|Q21JI8|DNLJ_SACD2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|89951126|gb|ABD81141.1| DNA ligase, NAD-dependent [Saccharophagus degradans 2-40] Length = 674 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 33/57 (57%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L +H K YY LD P D YD++ + L A+++QFPEL ED P VG Sbjct: 10 KLESLKNQINYHNKLYYVLDAPELPDAEYDKLFQELQAIEQQFPELVTEDSPTQRVG 66 >gi|115379272|ref|ZP_01466385.1| DNA ligase [Stigmatella aurantiaca DW4/3-1] gi|115363713|gb|EAU62835.1| DNA ligase [Stigmatella aurantiaca DW4/3-1] Length = 443 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 10/84 (11%) Query: 35 LPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVS 94 LP+ L V + A L + HH YY LD P +D YDR+ Sbjct: 34 LPSPARL-------PPVDLKT---AETRARDLRRELAHHNHRYYVLDSPEVSDAEYDRLM 83 Query: 95 ERLDALQEQFPELFDEDHPWNTVG 118 L L+ QFP L D P VG Sbjct: 84 RELQGLEAQFPALATPDSPTQRVG 107 >gi|70729275|ref|YP_259012.1| NAD-dependent DNA ligase LigA [Pseudomonas fluorescens Pf-5] gi|123734866|sp|Q4KFH1|DNLJ_PSEF5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|68343574|gb|AAY91180.1| DNA ligase, NAD-dependent [Pseudomonas fluorescens Pf-5] Length = 788 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L H Y+ LD+P D YDR+ L AL+ + PEL D P VG Sbjct: 4 AETRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFRELKALEAEHPELVTSDSPTQRVG 63 >gi|330722383|gb|EGH00233.1| DNA ligase [gamma proteobacterium IMCC2047] Length = 258 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ EVE L H YY LD+P D YDR+ +L ++ Q PEL +D P Sbjct: 1 MTSAPLRQEVEALRAQLNQHNYRYYVLDEPSIPDVEYDRLLRQLQTIEAQHPELISQDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|113460523|ref|YP_718587.1| NAD-dependent DNA ligase LigA [Haemophilus somnus 129PT] gi|122945214|sp|Q0I2H6|DNLJ_HAES1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|112822566|gb|ABI24655.1| DNA ligase (NAD+) [Haemophilus somnus 129PT] Length = 673 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 35/60 (58%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L ++ HH+ Y+ LD+P D YDR+ +L AL++Q+PE E+ P VG Sbjct: 8 IKQQIEELRQLLRHHEYQYHVLDNPQIPDSEYDRLFHQLKALEQQYPEYASENSPTQRVG 67 >gi|322831833|ref|YP_004211860.1| DNA ligase, NAD-dependent [Rahnella sp. Y9602] gi|321167034|gb|ADW72733.1| DNA ligase, NAD-dependent [Rahnella sp. Y9602] Length = 673 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ LD P D YDR+ L L+ PEL D P Sbjct: 2 ATIEEQISQLRTQLRHHEYQYHVLDAPEVPDAEYDRLMRELRELETAHPELVTADSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|170718864|ref|YP_001784038.1| NAD-dependent DNA ligase LigA [Haemophilus somnus 2336] gi|254781341|sp|B0USD9|DNLJ_HAES2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|168826993|gb|ACA32364.1| DNA ligase, NAD-dependent [Haemophilus somnus 2336] Length = 667 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 35/60 (58%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L ++ HH+ Y+ LD+P D YDR+ +L AL++Q+PE E+ P VG Sbjct: 2 IKQQIEELRQLLRHHEYQYHVLDNPQIPDSEYDRLFHQLKALEQQYPEYASENSPTQRVG 61 >gi|311278661|ref|YP_003940892.1| DNA ligase, NAD-dependent [Enterobacter cloacae SCF1] gi|308747856|gb|ADO47608.1| DNA ligase, NAD-dependent [Enterobacter cloacae SCF1] Length = 671 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P VG Sbjct: 4 IEQQLTALRATLRHHEYLYHVMDAPELPDAEYDRLMRELRELEAKHPELITPDSPTQRVG 63 >gi|217979603|ref|YP_002363750.1| DNA ligase, NAD-dependent [Methylocella silvestris BL2] gi|254781370|sp|B8ETN6|DNLJ_METSB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|217504979|gb|ACK52388.1| DNA ligase, NAD-dependent [Methylocella silvestris BL2] Length = 700 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 32/72 (44%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 AK + +++ +A E L H YYR D P +D YDR+ R L+ FPE Sbjct: 2 SAKPIDAMTLAQARREHSRLGAEIAAHDARYYREDAPTVSDAEYDRLRRRYGELESAFPE 61 Query: 107 LFDEDHPWNTVG 118 L D VG Sbjct: 62 LASPDSLTKKVG 73 >gi|262042032|ref|ZP_06015211.1| DNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040623|gb|EEW41715.1| DNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 671 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ +L L+ Q PEL D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEVPDAEYDRLMRKLRELESQHPELITPDSPTQRVG 63 >gi|152971289|ref|YP_001336398.1| NAD-dependent DNA ligase LigA [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166215815|sp|A6TC47|DNLJ_KLEP7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|150956138|gb|ABR78168.1| DNA ligase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 671 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ +L L+ Q PEL D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEVPDAEYDRLMRKLRELESQHPELITPDSPTQRVG 63 >gi|301063517|ref|ZP_07204049.1| DNA ligase (NAD(+)) [delta proteobacterium NaphS2] gi|300442456|gb|EFK06689.1| DNA ligase (NAD(+)) [delta proteobacterium NaphS2] Length = 671 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 33/62 (53%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ E++ L + +H YY LDDP D YDR+ +RL L+ + PEL D P Sbjct: 2 EKSRQEIDELKQKIEYHNHRYYVLDDPEIPDADYDRLFQRLLELETKHPELRSPDSPTRK 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|238895883|ref|YP_002920619.1| NAD-dependent DNA ligase LigA [Klebsiella pneumoniae NTUH-K2044] gi|238548201|dbj|BAH64552.1| DNA ligase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 671 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ +L L+ Q PEL D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEVPDAEYDRLMRKLRELESQHPELITPDSPTQRVG 63 >gi|330013648|ref|ZP_08307732.1| DNA ligase [Klebsiella sp. MS 92-3] gi|328533421|gb|EGF60158.1| DNA ligase [Klebsiella sp. MS 92-3] Length = 671 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ +L L+ Q PEL D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEVPDAEYDRLMRKLRELESQHPELITPDSPTQRVG 63 >gi|116748867|ref|YP_845554.1| DNA ligase, NAD-dependent [Syntrophobacter fumaroxidans MPOB] gi|116697931|gb|ABK17119.1| DNA ligase, NAD-dependent [Syntrophobacter fumaroxidans MPOB] Length = 694 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 30/64 (46%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + +A +E L + HH YY LD P +D YD + L L+E +P L D P Sbjct: 22 DREKAHARIEALREEIRHHNYLYYVLDRPEISDEAYDGLFRELVRLEESYPALITPDSPT 81 Query: 115 NTVG 118 VG Sbjct: 82 QRVG 85 >gi|166216279|sp|A0LI67|DNLJ_SYNFM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 675 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 30/64 (46%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + +A +E L + HH YY LD P +D YD + L L+E +P L D P Sbjct: 3 DREKAHARIEALREEIRHHNYLYYVLDRPEISDEAYDGLFRELVRLEESYPALITPDSPT 62 Query: 115 NTVG 118 VG Sbjct: 63 QRVG 66 >gi|260550982|ref|ZP_05825187.1| DNA ligase [Acinetobacter sp. RUH2624] gi|260405930|gb|EEW99417.1| DNA ligase [Acinetobacter sp. RUH2624] Length = 691 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + ++ L+++ H YY +D P +D YD + +L AL+EQ+PEL D P Sbjct: 14 MAITSVIEQMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPELVQTDSP 73 Query: 114 WNTVG 118 VG Sbjct: 74 TTKVG 78 >gi|113868039|ref|YP_726528.1| NAD-dependent DNA ligase [Ralstonia eutropha H16] gi|123133949|sp|Q0KA11|DNLJ_RALEH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|113526815|emb|CAJ93160.1| NAD-dependent DNA ligase [Ralstonia eutropha H16] Length = 709 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 29/73 (39%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D + L A V +L H YY LD P D YD + L AL+ + P Sbjct: 11 DASAPAGPLPPEAAAKRVAWLRDELDRHNYQYYVLDAPTIPDAEYDALFSELQALELEHP 70 Query: 106 ELFDEDHPWNTVG 118 EL D P VG Sbjct: 71 ELQTPDSPTQRVG 83 >gi|322613832|gb|EFY10771.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617441|gb|EFY14340.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624929|gb|EFY21758.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629628|gb|EFY26404.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633942|gb|EFY30679.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635621|gb|EFY32332.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639981|gb|EFY36651.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644326|gb|EFY40867.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322655311|gb|EFY51620.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658357|gb|EFY54623.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664357|gb|EFY60554.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668412|gb|EFY64568.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673252|gb|EFY69358.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676644|gb|EFY72712.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683394|gb|EFY79408.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685720|gb|EFY81713.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192602|gb|EFZ77831.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196835|gb|EFZ81978.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202141|gb|EFZ87199.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208024|gb|EFZ92969.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212850|gb|EFZ97659.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217119|gb|EGA01841.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219619|gb|EGA04102.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323229192|gb|EGA13316.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235493|gb|EGA19577.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237321|gb|EGA21384.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245552|gb|EGA29550.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248968|gb|EGA32891.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253065|gb|EGA36897.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255865|gb|EGA39610.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261411|gb|EGA44996.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266454|gb|EGA49942.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269716|gb|EGA53166.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 671 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|224583040|ref|YP_002636838.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254781413|sp|C0PZB4|DNLJ_SALPC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|224467567|gb|ACN45397.1| DNA ligase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 671 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|207857840|ref|YP_002244491.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|254781409|sp|B5R3V4|DNLJ_SALEP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|206709643|emb|CAR33993.1| DNA ligase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 671 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|205353534|ref|YP_002227335.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|254781410|sp|B5RCP9|DNLJ_SALG2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|205273315|emb|CAR38285.1| DNA ligase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628629|gb|EGE34972.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 671 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|168466836|ref|ZP_02700690.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195630762|gb|EDX49354.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 671 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|168261543|ref|ZP_02683516.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205349337|gb|EDZ35968.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 671 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|194444893|ref|YP_002041687.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|254781412|sp|B4SZU5|DNLJ_SALNS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|194403556|gb|ACF63778.1| DNA ligase [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 671 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|168243193|ref|ZP_02668125.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194449589|ref|YP_002046491.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|254781411|sp|B4TCF6|DNLJ_SALHS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|194407893|gb|ACF68112.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205337689|gb|EDZ24453.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 671 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|204929538|ref|ZP_03220612.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321257|gb|EDZ06457.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 671 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|168238909|ref|ZP_02663967.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734182|ref|YP_002115493.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|254781415|sp|B4TQF8|DNLJ_SALSV RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|194709684|gb|ACF88905.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288317|gb|EDY27698.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 671 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|198243638|ref|YP_002216496.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|254781408|sp|B5FQB9|DNLJ_SALDC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|197938154|gb|ACH75487.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326624250|gb|EGE30595.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 671 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|167549563|ref|ZP_02343322.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325268|gb|EDZ13107.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 671 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|161612830|ref|YP_001586795.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|190359282|sp|A9N362|DNLJ_SALPB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|161362194|gb|ABX65962.1| hypothetical protein SPAB_00529 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 671 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|62180995|ref|YP_217412.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|75481868|sp|Q57LT1|DNLJ_SALCH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|62128628|gb|AAX66331.1| DNA ligase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715476|gb|EFZ07047.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 671 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|56412686|ref|YP_149761.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361620|ref|YP_002141256.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81362021|sp|Q5PNE2|DNLJ_SALPA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781414|sp|B5BB72|DNLJ_SALPK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|56126943|gb|AAV76449.1| DNA ligase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093096|emb|CAR58535.1| DNA ligase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 671 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|16765747|ref|NP_461362.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167991721|ref|ZP_02572820.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|197262860|ref|ZP_03162934.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|81522316|sp|Q8ZN89|DNLJ_SALTY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|16420966|gb|AAL21321.1| DNA ligase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197241115|gb|EDY23735.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205329843|gb|EDZ16607.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261247627|emb|CBG25454.1| DNA ligase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994529|gb|ACY89414.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158979|emb|CBW18492.1| DNA ligase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913414|dbj|BAJ37388.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321222873|gb|EFX47944.1| DNA ligase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130756|gb|ADX18186.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 671 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|197247622|ref|YP_002147380.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|254781407|sp|B5F0F5|DNLJ_SALA4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|197211325|gb|ACH48722.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 671 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|73748436|ref|YP_307675.1| DNA ligase, NAD-dependent [Dehalococcoides sp. CBDB1] gi|123759761|sp|Q3ZX08|DNLJ_DEHSC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|73660152|emb|CAI82759.1| DNA ligase, NAD-dependent [Dehalococcoides sp. CBDB1] Length = 677 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 30/58 (51%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 IEVE L + H + YY D+P +D YD + RL L+E PEL D P VG Sbjct: 6 IEVENLRREINRHNQLYYVQDNPEISDAQYDTLIRRLKELEEAHPELVTPDSPTQKVG 63 >gi|197285679|ref|YP_002151551.1| NAD-dependent DNA ligase LigA [Proteus mirabilis HI4320] gi|254781393|sp|B4EZR2|DNLJ_PROMH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|194683166|emb|CAR43788.1| DNA ligase [Proteus mirabilis HI4320] Length = 675 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L HH+ Y+ +D P D YDR+ +L AL+ + PEL D P VG Sbjct: 5 IQQQIDELRVTLRHHEYLYHVMDAPEIPDAEYDRLMNKLKALEAEHPELITPDSPTQRVG 64 >gi|227356188|ref|ZP_03840577.1| DNA ligase [Proteus mirabilis ATCC 29906] gi|227163652|gb|EEI48568.1| DNA ligase [Proteus mirabilis ATCC 29906] Length = 675 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L HH+ Y+ +D P D YDR+ +L AL+ + PEL D P VG Sbjct: 5 IQQQIDELRVTLRHHEYLYHVMDAPEIPDAEYDRLMNKLKALEAEHPELITPDSPTQRVG 64 >gi|168231967|ref|ZP_02657025.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194471791|ref|ZP_03077775.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194458155|gb|EDX46994.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333574|gb|EDZ20338.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 671 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|117927902|ref|YP_872453.1| DNA ligase, NAD-dependent [Acidothermus cellulolyticus 11B] gi|166215382|sp|A0LSQ7|DNLJ_ACIC1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|117648365|gb|ABK52467.1| DNA ligase, NAD-dependent [Acidothermus cellulolyticus 11B] Length = 695 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 28/63 (44%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S +A LVK H YY LD P +D YD + L+ ++ +PEL D P Sbjct: 12 SAADAARRHAELVKEIEEHAYRYYVLDAPTISDAEYDALMRELEEIENAYPELRTPDSPT 71 Query: 115 NTV 117 V Sbjct: 72 QKV 74 >gi|167631047|ref|YP_001681546.1| DNA ligase, nad-dependent [Heliobacterium modesticaldum Ice1] gi|254781344|sp|B0TDL0|DNLJ_HELMI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|167593787|gb|ABZ85535.1| DNA ligase, nad-dependent [Heliobacterium modesticaldum Ice1] Length = 675 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 28/63 (44%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 +A + L + H YY LD P +D YDR+ L L++ PEL D P Sbjct: 10 PADAAQRIAELREQIRRHDYCYYVLDAPEISDAEYDRLMRELLDLEQSHPELVTADSPSQ 69 Query: 116 TVG 118 VG Sbjct: 70 RVG 72 >gi|308375959|ref|ZP_07668156.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu007] gi|308344705|gb|EFP33556.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu007] Length = 614 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 35/71 (49%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + + E + + + L + HQ YY D P+ +D +D + RL+AL+EQ PEL Sbjct: 2 SSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPEL 61 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 62 RTPDSPTQLVG 72 >gi|200388789|ref|ZP_03215401.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605887|gb|EDZ04432.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 671 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|238792031|ref|ZP_04635667.1| DNA ligase [Yersinia intermedia ATCC 29909] gi|238728662|gb|EEQ20180.1| DNA ligase [Yersinia intermedia ATCC 29909] Length = 670 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 31/62 (50%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L HH+ Y+ LD P D YDR+ ++L +L+ Q PEL D P Sbjct: 2 ESIIQQINQLRTSLRHHEHLYHVLDAPEIPDAEYDRLMQQLRSLEAQHPELITHDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|238912842|ref|ZP_04656679.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 671 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|168817829|ref|ZP_02829829.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205345161|gb|EDZ31925.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086917|emb|CBY96687.1| DNA ligase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 671 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|78223924|ref|YP_385671.1| NAD-dependent DNA ligase C4-type [Geobacter metallireducens GS-15] gi|123756373|sp|Q39S28|DNLJ_GEOMG RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|78195179|gb|ABB32946.1| NAD-dependent DNA ligase C4-type [Geobacter metallireducens GS-15] Length = 671 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 28/65 (43%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + A + L H YY LD P TD YD + L L+E+ PEL D P Sbjct: 1 MDRNAAERRIAELRAEIRRHDHLYYVLDRPELTDAEYDALYRELLKLEEEHPELVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SRRVG 65 >gi|238756322|ref|ZP_04617636.1| DNA ligase [Yersinia ruckeri ATCC 29473] gi|238705475|gb|EEP97878.1| DNA ligase [Yersinia ruckeri ATCC 29473] Length = 674 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L HH+ Y+ LD P D YDR+ L L+ Q PEL D P Sbjct: 2 ESIIQQINQLRASLRHHEHQYHVLDAPEIPDAEYDRLMGELRELEAQHPELITADSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|215412865|ref|ZP_03421575.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis 94_M4241A] gi|298526485|ref|ZP_07013894.1| DNA ligase [NAD dependent] ligA [Mycobacterium tuberculosis 94_M4241A] gi|298496279|gb|EFI31573.1| DNA ligase [NAD dependent] ligA [Mycobacterium tuberculosis 94_M4241A] Length = 691 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 35/71 (49%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + + E + + + L + HQ YY D P+ +D +D + RL+AL+EQ PEL Sbjct: 2 SSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPEL 61 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 62 RTPDSPTQLVG 72 >gi|331663971|ref|ZP_08364881.1| DNA ligase, NAD-dependent [Escherichia coli TA143] gi|331059770|gb|EGI31747.1| DNA ligase, NAD-dependent [Escherichia coli TA143] Length = 671 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDVEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|300897228|ref|ZP_07115672.1| DNA ligase, NAD-dependent [Escherichia coli MS 198-1] gi|300358986|gb|EFJ74856.1| DNA ligase, NAD-dependent [Escherichia coli MS 198-1] Length = 671 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDVEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|218705919|ref|YP_002413438.1| NAD-dependent DNA ligase LigA [Escherichia coli UMN026] gi|293405854|ref|ZP_06649846.1| DNA ligase [Escherichia coli FVEC1412] gi|298381604|ref|ZP_06991203.1| DNA ligase [Escherichia coli FVEC1302] gi|254781326|sp|B7N602|DNLJ_ECOLU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218433016|emb|CAR13911.1| DNA ligase, NAD(+)-dependent [Escherichia coli UMN026] gi|284922366|emb|CBG35453.1| DNA ligase [Escherichia coli 042] gi|291428062|gb|EFF01089.1| DNA ligase [Escherichia coli FVEC1412] gi|298279046|gb|EFI20560.1| DNA ligase [Escherichia coli FVEC1302] Length = 671 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDVEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|118590881|ref|ZP_01548281.1| NAD-dependent DNA ligase LigA [Stappia aggregata IAM 12614] gi|118436403|gb|EAV43044.1| NAD-dependent DNA ligase LigA [Stappia aggregata IAM 12614] Length = 750 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 38/71 (53%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + +L++ EA +E++ L H + Y++ D P+ +D YD + R +++ +FP L Sbjct: 41 QTDIDALTQEEAQVELKRLAAEIAEHDRRYHQEDAPVISDADYDALRRRNASIEARFPNL 100 Query: 108 FDEDHPWNTVG 118 +D P VG Sbjct: 101 ILDDGPSAQVG 111 >gi|184157078|ref|YP_001845417.1| NAD-dependent DNA ligase [Acinetobacter baumannii ACICU] gi|254778156|sp|B2HUJ5|DNLJ_ACIBC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|183208672|gb|ACC56070.1| NAD-dependent DNA ligase [Acinetobacter baumannii ACICU] Length = 673 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 33/59 (55%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + ++ L+++ H YY +D P +D YD + +L AL+EQ+PEL D P VG Sbjct: 2 IEQMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPELVQADSPTTKVG 60 >gi|15610151|ref|NP_217530.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis H37Rv] gi|31794191|ref|NP_856684.1| NAD-dependent DNA ligase LigA [Mycobacterium bovis AF2122/97] gi|121638896|ref|YP_979120.1| NAD-dependent DNA ligase LigA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662865|ref|YP_001284388.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis H37Ra] gi|148824204|ref|YP_001288958.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis F11] gi|161350059|ref|NP_337609.2| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis CDC1551] gi|167967816|ref|ZP_02550093.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis H37Ra] gi|215431968|ref|ZP_03429887.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis EAS054] gi|219559049|ref|ZP_03538125.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis T17] gi|224991388|ref|YP_002646077.1| NAD-dependent DNA ligase [Mycobacterium bovis BCG str. Tokyo 172] gi|254365649|ref|ZP_04981694.1| DNA ligase [NAD dependent] ligA [Mycobacterium tuberculosis str. Haarlem] gi|260188040|ref|ZP_05765514.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis CPHL_A] gi|260206343|ref|ZP_05773834.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis K85] gi|289448688|ref|ZP_06438432.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis CPHL_A] gi|289553196|ref|ZP_06442406.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis KZN 605] gi|289571216|ref|ZP_06451443.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis T17] gi|289575722|ref|ZP_06455949.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis K85] gi|289755132|ref|ZP_06514510.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis EAS054] gi|294993895|ref|ZP_06799586.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis 210] gi|297635642|ref|ZP_06953422.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis KZN 4207] gi|297732640|ref|ZP_06961758.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis KZN R506] gi|306777310|ref|ZP_07415647.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu001] gi|306785860|ref|ZP_07424182.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu003] gi|306789901|ref|ZP_07428223.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu004] gi|306794711|ref|ZP_07433013.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu005] gi|306798954|ref|ZP_07437256.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu006] gi|306969091|ref|ZP_07481752.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu009] gi|306973427|ref|ZP_07486088.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu010] gi|307081136|ref|ZP_07490306.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu011] gi|307085740|ref|ZP_07494853.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu012] gi|313659972|ref|ZP_07816852.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis KZN V2475] gi|54036987|sp|P63973|DNLJ_MYCTU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|54036988|sp|P63974|DNLJ_MYCBO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166215822|sp|A1KN09|DNLJ_MYCBP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166216214|sp|A5U726|DNLJ_MYCTA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781375|sp|C1AGD0|DNLJ_MYCBT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|2791611|emb|CAA16099.1| PROBABLE DNA LIGASE [NAD DEPENDENT] LIGA (POLYDEOXYRIBONUCLEOTIDE SYNTHASE [NAD+]) [Mycobacterium tuberculosis H37Rv] gi|31619786|emb|CAD96726.1| PROBABLE DNA LIGASE [NAD DEPENDENT] LIGA (POLYDEOXYRIBONUCLEOTIDE SYNTHASE [NAD+]) [Mycobacterium bovis AF2122/97] gi|121494544|emb|CAL73025.1| Probable dna ligase [nad dependent] ligA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134151162|gb|EBA43207.1| DNA ligase [NAD dependent] ligA [Mycobacterium tuberculosis str. Haarlem] gi|148507017|gb|ABQ74826.1| DNA ligase (NAD dependent) LigA [Mycobacterium tuberculosis H37Ra] gi|148722731|gb|ABR07356.1| DNA ligase [NAD dependent] ligA [Mycobacterium tuberculosis F11] gi|224774503|dbj|BAH27309.1| NAD-dependent DNA ligase [Mycobacterium bovis BCG str. Tokyo 172] gi|289421646|gb|EFD18847.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis CPHL_A] gi|289437828|gb|EFD20321.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis KZN 605] gi|289540153|gb|EFD44731.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis K85] gi|289544970|gb|EFD48618.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis T17] gi|289695719|gb|EFD63148.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis EAS054] gi|308214358|gb|EFO73757.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu001] gi|308329532|gb|EFP18383.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu003] gi|308333670|gb|EFP22521.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu004] gi|308337029|gb|EFP25880.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu005] gi|308340842|gb|EFP29693.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu006] gi|308353381|gb|EFP42232.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu009] gi|308357226|gb|EFP46077.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu010] gi|308361179|gb|EFP50030.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu011] gi|308364771|gb|EFP53622.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu012] gi|323718395|gb|EGB27569.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis CDC1551A] gi|326904628|gb|EGE51561.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis W-148] gi|328457668|gb|AEB03091.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis KZN 4207] Length = 691 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 35/71 (49%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + + E + + + L + HQ YY D P+ +D +D + RL+AL+EQ PEL Sbjct: 2 SSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPEL 61 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 62 RTPDSPTQLVG 72 >gi|317491275|ref|ZP_07949711.1| DNA ligase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920822|gb|EFV42145.1| DNA ligase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 678 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 26/52 (50%) Query: 67 VKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ L AL+EQ PEL D P VG Sbjct: 17 RTALRHHEYQYHVLDAPEIPDAEYDRLMRELRALEEQHPELITPDSPTQRVG 68 >gi|90416525|ref|ZP_01224456.1| DNA ligase, NAD-dependent [marine gamma proteobacterium HTCC2207] gi|90331724|gb|EAS46952.1| DNA ligase, NAD-dependent [marine gamma proteobacterium HTCC2207] Length = 677 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 29/62 (46%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E E L H YY LD+P D YDR RL +++Q PEL +D P Sbjct: 6 EQVRAEYEQLKDELNQHNHRYYVLDEPTIPDSEYDRSMRRLQDIEQQHPELLSDDSPSQR 65 Query: 117 VG 118 VG Sbjct: 66 VG 67 >gi|294677201|ref|YP_003577816.1| DNA ligase [Rhodobacter capsulatus SB 1003] gi|294476021|gb|ADE85409.1| DNA ligase (NAD(+)) [Rhodobacter capsulatus SB 1003] Length = 707 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 35/72 (48%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 + SL++ EA EV LV Y+ LD P +D YD + RL A++ +FP+ Sbjct: 6 PFSDLDSLTRAEAEAEVPELVARIEAANHAYHTLDAPKISDADYDALKRRLAAIEARFPD 65 Query: 107 LFDEDHPWNTVG 118 L D P VG Sbjct: 66 LARADSPTMRVG 77 >gi|270307958|ref|YP_003330016.1| DNA ligase, NAD-dependent [Dehalococcoides sp. VS] gi|270153850|gb|ACZ61688.1| DNA ligase, NAD-dependent [Dehalococcoides sp. VS] Length = 680 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+E L + H + YY D+P +D YD + RL L+E PEL + P VG Sbjct: 8 QTEIENLRREINRHNQLYYVQDNPEISDSEYDALLRRLKELEEAHPELVTPNSPTQRVG 66 >gi|238799224|ref|ZP_04642672.1| DNA ligase [Yersinia mollaretii ATCC 43969] gi|238716921|gb|EEQ08789.1| DNA ligase [Yersinia mollaretii ATCC 43969] Length = 670 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P Sbjct: 2 ESIIQQINQLRTSLRHHEHQYHVLDAPEIPDAEYDRLMQQLRDLEAQHPELITSDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|127513305|ref|YP_001094502.1| DNA ligase, NAD-dependent [Shewanella loihica PV-4] gi|166216242|sp|A3QFJ5|DNLJ_SHELP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|126638600|gb|ABO24243.1| DNA ligase, NAD-dependent [Shewanella loihica PV-4] Length = 669 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E++ L H YY D P D YDR+ RL L+ + PEL D P VG Sbjct: 4 IQDEIKQLTDELNQHNYRYYVDDAPSIPDAEYDRLMRRLQELEAEHPELALADSPTQRVG 63 >gi|215405001|ref|ZP_03417182.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis 02_1987] gi|289746820|ref|ZP_06506198.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis 02_1987] gi|289687348|gb|EFD54836.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis 02_1987] Length = 691 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 35/71 (49%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + + E + + + L + HQ YY D P+ +D +D + RL+AL+EQ PEL Sbjct: 2 SSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPEL 61 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 62 RTPDSPTQLVG 72 >gi|238790828|ref|ZP_04634584.1| DNA ligase [Yersinia frederiksenii ATCC 33641] gi|238721075|gb|EEQ12759.1| DNA ligase [Yersinia frederiksenii ATCC 33641] Length = 670 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P Sbjct: 2 ESIIQQINQLRTSLRHHEHQYHVLDAPEIPDAEYDRLMQQLRDLEAQHPELITNDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|322652148|gb|EFY48510.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] Length = 571 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|238765534|ref|ZP_04626449.1| DNA ligase [Yersinia kristensenii ATCC 33638] gi|238696249|gb|EEP89051.1| DNA ligase [Yersinia kristensenii ATCC 33638] Length = 670 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P Sbjct: 2 ESIIQQINQLRTSLRHHEHQYHVLDAPEIPDAEYDRLMQQLRDLEAQHPELITNDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|254502790|ref|ZP_05114941.1| DNA ligase, NAD-dependent [Labrenzia alexandrii DFL-11] gi|222438861|gb|EEE45540.1| DNA ligase, NAD-dependent [Labrenzia alexandrii DFL-11] Length = 725 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 2/79 (2%) Query: 42 ESWLDKAKKVT--SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDA 99 ES A + L+ A E+E L H + Y++ D P +D YD + R A Sbjct: 7 ESSSTPAPDIAVLDLTPEAAKAELERLASEIAEHDRRYHQEDAPTISDADYDALRRRNSA 66 Query: 100 LQEQFPELFDEDHPWNTVG 118 ++ +FP+L D P VG Sbjct: 67 IEARFPDLILADGPSAQVG 85 >gi|192361192|ref|YP_001982383.1| DNA ligase, NAD-dependent [Cellvibrio japonicus Ueda107] gi|254781281|sp|B3PGQ8|DNLJ_CELJU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190687357|gb|ACE85035.1| DNA ligase, NAD-dependent [Cellvibrio japonicus Ueda107] Length = 680 Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ L + +H YY LD+P D YDR+ +RL L+ Q+P D P Sbjct: 8 DDVSAEIAQLREQIRYHNYRYYALDEPQIPDAEYDRLMQRLRELEAQYPASVTPDSPTQR 67 Query: 117 VG 118 VG Sbjct: 68 VG 69 >gi|254781232|sp|B0VU02|DNLJ_ACIBS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 678 Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + ++ L+++ H YY +D P +D YD + +L AL+EQ+PE D P Sbjct: 1 MAITSVIEQMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPEFVQADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TTKVG 65 >gi|169634132|ref|YP_001707868.1| DNA ligase [Acinetobacter baumannii SDF] gi|169152924|emb|CAP01965.1| DNA ligase [Acinetobacter baumannii] Length = 691 Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + ++ L+++ H YY +D P +D YD + +L AL+EQ+PE D P Sbjct: 14 MAITSVIEQMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPEFVQADSP 73 Query: 114 WNTVG 118 VG Sbjct: 74 TTKVG 78 >gi|293395040|ref|ZP_06639327.1| DNA ligase [Serratia odorifera DSM 4582] gi|291422447|gb|EFE95689.1| DNA ligase [Serratia odorifera DSM 4582] Length = 673 Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ LD P D YDR+ L L+E PEL D P VG Sbjct: 6 KKINQLRTSLRHHEYLYHVLDAPEIPDAEYDRLMRELRTLEEAHPELITADSPTQRVG 63 >gi|238752012|ref|ZP_04613496.1| DNA ligase [Yersinia rohdei ATCC 43380] gi|238709712|gb|EEQ01946.1| DNA ligase [Yersinia rohdei ATCC 43380] Length = 670 Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 30/62 (48%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L HH+ YY LD P D YDR+ ++L L+ Q PEL D P Sbjct: 2 ESIIQQINQLKTSLRHHEHQYYVLDAPEIPDAEYDRMMQQLRELEAQHPELITNDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|182677699|ref|YP_001831845.1| DNA ligase, NAD-dependent [Beijerinckia indica subsp. indica ATCC 9039] gi|254781257|sp|B2IGH4|DNLJ_BEII9 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|182633582|gb|ACB94356.1| DNA ligase, NAD-dependent [Beijerinckia indica subsp. indica ATCC 9039] Length = 699 Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 35/74 (47%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + K + SLS +A E L + H + YY+ D P +D YD + R +AL+ F Sbjct: 1 MTVQKPIESLSPAQAKREHRRLGEQITEHDRLYYQEDAPRVSDAEYDALRRRYEALETAF 60 Query: 105 PELFDEDHPWNTVG 118 PEL + +G Sbjct: 61 PELVSAESLTKKIG 74 >gi|317153517|ref|YP_004121565.1| DNA ligase, NAD-dependent [Desulfovibrio aespoeensis Aspo-2] gi|316943768|gb|ADU62819.1| DNA ligase, NAD-dependent [Desulfovibrio aespoeensis Aspo-2] Length = 678 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ E + +L + HH YY LDDP +D YD + L AL+ PEL D + P Sbjct: 1 MASSEIIDRAAWLRERIEHHNHRYYVLDDPEISDAEYDALFRELAALEAAHPELDDANSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TRRVG 65 >gi|254239878|ref|ZP_04933200.1| DNA ligase [Pseudomonas aeruginosa 2192] gi|126193256|gb|EAZ57319.1| DNA ligase [Pseudomonas aeruginosa 2192] Length = 794 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 54 LSKGEAMIE-VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++ +A E + L H YY LD+P D YDR+ L AL+ ++P+L D Sbjct: 1 MTDTQAAAERIAQLRTELDTHNYRYYVLDEPSIPDAEYDRLFRELQALEAEYPQLLTPDS 60 Query: 113 PWNTV 117 P V Sbjct: 61 PTQRV 65 >gi|15596726|ref|NP_250220.1| NAD-dependent DNA ligase LigA [Pseudomonas aeruginosa PAO1] gi|107100960|ref|ZP_01364878.1| hypothetical protein PaerPA_01001990 [Pseudomonas aeruginosa PACS2] gi|218892513|ref|YP_002441382.1| NAD-dependent DNA ligase LigA [Pseudomonas aeruginosa LESB58] gi|81541359|sp|Q9I3I4|DNLJ_PSEAE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781394|sp|B7UVJ3|DNLJ_PSEA8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|9947487|gb|AAG04918.1|AE004581_5 DNA ligase [Pseudomonas aeruginosa PAO1] gi|218772741|emb|CAW28526.1| DNA ligase [Pseudomonas aeruginosa LESB58] Length = 794 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 54 LSKGEAMIE-VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++ +A E + L H YY LD+P D YDR+ L AL+ ++P+L D Sbjct: 1 MTDTQAAAERIAQLRTELDTHNYRYYVLDEPSIPDAEYDRLFRELQALEAEYPQLLTPDS 60 Query: 113 PWNTV 117 P V Sbjct: 61 PTQRV 65 >gi|254234624|ref|ZP_04927947.1| DNA ligase [Pseudomonas aeruginosa C3719] gi|126166555|gb|EAZ52066.1| DNA ligase [Pseudomonas aeruginosa C3719] Length = 794 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 54 LSKGEAMIE-VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++ +A E + L H YY LD+P D YDR+ L AL+ ++P+L D Sbjct: 1 MTDTQAAAERIAQLRTELDTHNYRYYVLDEPSIPDAEYDRLFRELQALEAEYPQLLTPDS 60 Query: 113 PWNTV 117 P V Sbjct: 61 PTQRV 65 >gi|297570387|ref|YP_003691731.1| DNA ligase, NAD-dependent [Desulfurivibrio alkaliphilus AHT2] gi|296926302|gb|ADH87112.1| DNA ligase, NAD-dependent [Desulfurivibrio alkaliphilus AHT2] Length = 680 Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 30/63 (47%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 K +A V L + +H YY LDDP D YD + L L+E++P L D P Sbjct: 11 KEQARQRVAELREQIRYHNHRYYVLDDPEIPDAEYDALFRELQELEERYPGLAGADSPSR 70 Query: 116 TVG 118 VG Sbjct: 71 QVG 73 >gi|326573825|gb|EGE23778.1| NAD-dependent DNA ligase [Moraxella catarrhalis O35E] Length = 691 Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 38/73 (52%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D +K S + + + ++ L+K+ H YY +D P +DG YD + L L++Q P Sbjct: 10 DTSKNNPSKANDQIIAQMRALIKLLKRHNHAYYVMDAPTISDGEYDGLRRTLMMLEQQHP 69 Query: 106 ELFDEDHPWNTVG 118 L D P NTVG Sbjct: 70 NLIQPDSPINTVG 82 >gi|325274411|ref|ZP_08140498.1| NAD-dependent DNA ligase LigA [Pseudomonas sp. TJI-51] gi|324100446|gb|EGB98205.1| NAD-dependent DNA ligase LigA [Pseudomonas sp. TJI-51] Length = 776 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L H YY LD+P D YDR+ L AL+ + P L D P VG Sbjct: 3 AETRIHELRAELDQHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPHLVTPDSPTQRVG 62 >gi|212710592|ref|ZP_03318720.1| hypothetical protein PROVALCAL_01658 [Providencia alcalifaciens DSM 30120] gi|212686673|gb|EEB46201.1| hypothetical protein PROVALCAL_01658 [Providencia alcalifaciens DSM 30120] Length = 678 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 5/74 (6%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + K +L++ +++ L + HH+ Y+ +D P D YD++ + L AL+ + Sbjct: 1 MTTKKNPDALTQ-----KIDALKQQLRHHEYLYHVMDAPEIPDVEYDKLMQELKALEAEH 55 Query: 105 PELFDEDHPWNTVG 118 PEL D P VG Sbjct: 56 PELITTDSPTQRVG 69 >gi|167034833|ref|YP_001670064.1| NAD-dependent DNA ligase LigA [Pseudomonas putida GB-1] gi|190359275|sp|B0KPX3|DNLJ_PSEPG RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166861321|gb|ABY99728.1| DNA ligase, NAD-dependent [Pseudomonas putida GB-1] Length = 776 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L H YY LD+P D YDR+ L AL+ + P L D P VG Sbjct: 3 AETRIHELRAELDQHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPHLVTPDSPTQRVG 62 >gi|238785571|ref|ZP_04629551.1| DNA ligase [Yersinia bercovieri ATCC 43970] gi|238713506|gb|EEQ05538.1| DNA ligase [Yersinia bercovieri ATCC 43970] Length = 670 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P Sbjct: 2 ESIIQQINQLRTSLRHHEHQYHVLDAPEIPDAEYDRLMQQLRDLESQHPELITSDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|170722763|ref|YP_001750451.1| NAD-dependent DNA ligase LigA [Pseudomonas putida W619] gi|254781396|sp|B1JC06|DNLJ_PSEPW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|169760766|gb|ACA74082.1| DNA ligase, NAD-dependent [Pseudomonas putida W619] Length = 776 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L H YY LD+P D YDR+ L AL+ + P L D P VG Sbjct: 3 AESRIHALRAELDQHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPHLVTPDSPTQRVG 62 >gi|152984776|ref|YP_001349158.1| NAD-dependent DNA ligase LigA [Pseudomonas aeruginosa PA7] gi|190359272|sp|A6V7X3|DNLJ_PSEA7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|150959934|gb|ABR81959.1| DNA ligase, NAD-dependent [Pseudomonas aeruginosa PA7] Length = 794 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 54 LSKGEAMIE-VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++ +A E + L H YY LD+P D YDR+ L AL+ + P+L D Sbjct: 1 MTDTQAAAERIAQLRTELDTHNYRYYVLDEPSIPDAEYDRLFRELQALEAEHPQLLTPDS 60 Query: 113 PWNTV 117 P V Sbjct: 61 PTQRV 65 >gi|260887264|ref|ZP_05898527.1| DNA ligase, NAD-dependent [Selenomonas sputigena ATCC 35185] gi|330838979|ref|YP_004413559.1| DNA ligase, NAD-dependent [Selenomonas sputigena ATCC 35185] gi|260863326|gb|EEX77826.1| DNA ligase, NAD-dependent [Selenomonas sputigena ATCC 35185] gi|329746743|gb|AEC00100.1| DNA ligase, NAD-dependent [Selenomonas sputigena ATCC 35185] Length = 669 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 34/65 (52%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + E E+ L + HH YY D+P +D YD++ +L AL+ ++PEL E+ P Sbjct: 1 MDIQEVKKELAQLRRTIRHHNVRYYNDDNPEISDYEYDQLMLQLKALEREYPELITENSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQKVG 65 >gi|330502846|ref|YP_004379715.1| NAD-dependent DNA ligase LigA [Pseudomonas mendocina NK-01] gi|328917132|gb|AEB57963.1| NAD-dependent DNA ligase LigA [Pseudomonas mendocina NK-01] Length = 786 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 28/61 (45%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A + L H YY LD+P D YDR+ L AL+ + PEL + P V Sbjct: 3 DAAQRISELRNELDAHNYRYYVLDEPSVPDAEYDRLFRELQALEAEHPELVTPESPTQRV 62 Query: 118 G 118 G Sbjct: 63 G 63 >gi|293609092|ref|ZP_06691395.1| DNA ligase [Acinetobacter sp. SH024] gi|292829665|gb|EFF88027.1| DNA ligase [Acinetobacter sp. SH024] Length = 679 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + ++ L+++ H YY +D P +D YD + +L AL+EQ+P+L D P Sbjct: 1 MATTSVIEQMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPDLVQSDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TTKVG 65 >gi|307132386|ref|YP_003884402.1| DNA ligase, NAD(+)-dependent [Dickeya dadantii 3937] gi|306529915|gb|ADM99845.1| DNA ligase, NAD(+)-dependent [Dickeya dadantii 3937] Length = 683 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 ++K +S +++E L +H+ Y+ D P D YD++ L L++ PE Sbjct: 5 ESKPADDIST--VSVQIEALRAQLRYHEYKYHVEDAPEIPDAEYDKLMNALKTLEQAHPE 62 Query: 107 LFDEDHPWNTVG 118 L D P VG Sbjct: 63 LVTPDSPTQRVG 74 >gi|167647059|ref|YP_001684722.1| NAD-dependent DNA ligase [Caulobacter sp. K31] gi|190359242|sp|B0T1N5|DNLJ_CAUSK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|167349489|gb|ABZ72224.1| DNA ligase, NAD-dependent [Caulobacter sp. K31] Length = 792 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ +A E+E L H Y++ D P +D YD + R ++++FP L + Sbjct: 6 VADLTEAQAAEELERLADDLAAHDLRYHQQDAPTISDAEYDALKRRNLDIEDRFPHLVRD 65 Query: 111 DHPWNTVG 118 + P VG Sbjct: 66 NSPSMRVG 73 >gi|332109529|gb|EGJ10452.1| DNA ligase (NAD+) [Rubrivivax benzoatilyticus JA2] Length = 686 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 30/64 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S A L +I HH YY LD P D YDR+ + L A++ + P+L D P Sbjct: 1 MSPTSAAERAAELRRILSHHAHRYYVLDAPEIPDAEYDRLFQELQAIESEHPDLLTPDSP 60 Query: 114 WNTV 117 + Sbjct: 61 TQRI 64 >gi|295688860|ref|YP_003592553.1| DNA ligase, NAD-dependent [Caulobacter segnis ATCC 21756] gi|295430763|gb|ADG09935.1| DNA ligase, NAD-dependent [Caulobacter segnis ATCC 21756] Length = 783 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 35/69 (50%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V L++ +A+ E+E L H Y++ D+P +D YD + R ++ +FP L Sbjct: 5 PVADLTEAQAVEELERLADELTRHDLAYHQQDNPTISDADYDALKRRNLDIETRFPHLVR 64 Query: 110 EDHPWNTVG 118 ++ P VG Sbjct: 65 DNSPSMRVG 73 >gi|325121133|gb|ADY80656.1| DNA ligase [Acinetobacter calcoaceticus PHEA-2] Length = 679 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + ++ L+++ H YY +D P +D YD + +L AL+EQ+P+L D P Sbjct: 1 MATTSVIEQMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPDLVQSDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TTKVG 65 >gi|323702801|ref|ZP_08114460.1| DNA ligase, NAD-dependent [Desulfotomaculum nigrificans DSM 574] gi|323532189|gb|EGB22069.1| DNA ligase, NAD-dependent [Desulfotomaculum nigrificans DSM 574] Length = 669 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 32/61 (52%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E VE L + +H YY LD+P TDG YD++ + L L+ +PEL D P V Sbjct: 7 EIKARVEELRREINYHNHQYYVLDNPTITDGQYDQLVQELLRLENAYPELVSPDSPTQRV 66 Query: 118 G 118 G Sbjct: 67 G 67 >gi|326570074|gb|EGE20120.1| NAD-dependent DNA ligase [Moraxella catarrhalis BC7] Length = 691 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 38/73 (52%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 + +K S + + + ++ L+K+ H YY +D P +DG YD + L L++Q P Sbjct: 10 NTSKNNPSKANDQIIAQMRALIKLLKRHNHAYYVMDAPTISDGEYDGLRRTLMMLEQQHP 69 Query: 106 ELFDEDHPWNTVG 118 L D P NTVG Sbjct: 70 NLIQPDSPINTVG 82 >gi|146307768|ref|YP_001188233.1| NAD-dependent DNA ligase LigA [Pseudomonas mendocina ymp] gi|190359273|sp|A4XVY5|DNLJ_PSEMY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145575969|gb|ABP85501.1| DNA ligase, NAD-dependent [Pseudomonas mendocina ymp] Length = 786 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 28/61 (45%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A + L H YY LD+P D YDR+ L AL+ + PEL + P V Sbjct: 3 DAAQRISELRNELDAHNYRYYVLDEPSVPDAEYDRLFRELQALEAEHPELVTPESPTQRV 62 Query: 118 G 118 G Sbjct: 63 G 63 >gi|154248881|ref|YP_001409706.1| DNA ligase, NAD-dependent [Fervidobacterium nodosum Rt17-B1] gi|190359256|sp|A7HJG6|DNLJ_FERNB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|154152817|gb|ABS60049.1| DNA ligase, NAD-dependent [Fervidobacterium nodosum Rt17-B1] Length = 681 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + EVE L K +H YY L P+ +D YD++ +RL L+E++PEL D P Sbjct: 1 MVSEKIKQEVEKLRKEIEYHNYRYYVLAQPVISDEEYDKLMKRLMELEEKYPELKTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|51597030|ref|YP_071221.1| NAD-dependent DNA ligase LigA [Yersinia pseudotuberculosis IP 32953] gi|186896113|ref|YP_001873225.1| NAD-dependent DNA ligase LigA [Yersinia pseudotuberculosis PB1/+] gi|81638946|sp|Q668M6|DNLJ_YERPS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781913|sp|B2K917|DNLJ_YERPB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|51590312|emb|CAH21949.1| DNA ligase [Yersinia pseudotuberculosis IP 32953] gi|186699139|gb|ACC89768.1| DNA ligase, NAD-dependent [Yersinia pseudotuberculosis PB1/+] Length = 670 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P Sbjct: 2 ESIIQQINQLRTSLRHHEHQYHVLDAPEIPDAEYDRMMQQLRDLEAQHPELVTNDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|260433791|ref|ZP_05787762.1| DNA ligase, NAD-dependent [Silicibacter lacuscaerulensis ITI-1157] gi|260417619|gb|EEX10878.1| DNA ligase, NAD-dependent [Silicibacter lacuscaerulensis ITI-1157] Length = 708 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 32/74 (43%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + V L++ +A E+ L L + Y+ D P +D YD + R ++ +F Sbjct: 1 MSNPIPVQELTEDQAKEELARLASALLRANELYHGQDAPEISDAEYDALKRRNLEIEARF 60 Query: 105 PELFDEDHPWNTVG 118 P L D P VG Sbjct: 61 PHLKRPDSPTEQVG 74 >gi|153948204|ref|YP_001400300.1| NAD-dependent DNA ligase LigA [Yersinia pseudotuberculosis IP 31758] gi|170023674|ref|YP_001720179.1| NAD-dependent DNA ligase LigA [Yersinia pseudotuberculosis YPIII] gi|190359300|sp|A7FGC2|DNLJ_YERP3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781915|sp|B1JFZ0|DNLJ_YERPY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|152959699|gb|ABS47160.1| DNA ligase, NAD-dependent [Yersinia pseudotuberculosis IP 31758] gi|169750208|gb|ACA67726.1| DNA ligase, NAD-dependent [Yersinia pseudotuberculosis YPIII] Length = 670 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P Sbjct: 2 ESIIQQINQLRTSLRHHEHQYHVLDAPEIPDAEYDRMMQQLRDLEAQHPELVTNDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|22125389|ref|NP_668812.1| NAD-dependent DNA ligase LigA [Yersinia pestis KIM 10] gi|45442391|ref|NP_993930.1| NAD-dependent DNA ligase LigA [Yersinia pestis biovar Microtus str. 91001] gi|108808172|ref|YP_652088.1| NAD-dependent DNA ligase LigA [Yersinia pestis Antiqua] gi|108811556|ref|YP_647323.1| NAD-dependent DNA ligase LigA [Yersinia pestis Nepal516] gi|145599373|ref|YP_001163449.1| NAD-dependent DNA ligase LigA [Yersinia pestis Pestoides F] gi|149365146|ref|ZP_01887181.1| DNA ligase [Yersinia pestis CA88-4125] gi|162420672|ref|YP_001607138.1| NAD-dependent DNA ligase LigA [Yersinia pestis Angola] gi|165926903|ref|ZP_02222735.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Orientalis str. F1991016] gi|165940356|ref|ZP_02228875.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Orientalis str. IP275] gi|166011271|ref|ZP_02232169.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Antiqua str. E1979001] gi|166212520|ref|ZP_02238555.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Antiqua str. B42003004] gi|167398917|ref|ZP_02304441.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421338|ref|ZP_02313091.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424444|ref|ZP_02316197.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470665|ref|ZP_02335369.1| DNA ligase, NAD-dependent [Yersinia pestis FV-1] gi|218930038|ref|YP_002347913.1| NAD-dependent DNA ligase LigA [Yersinia pestis CO92] gi|229838581|ref|ZP_04458740.1| DNA ligase, NAD(+)-dependent [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895648|ref|ZP_04510819.1| DNA ligase, NAD(+)-dependent [Yersinia pestis Pestoides A] gi|229899147|ref|ZP_04514290.1| DNA ligase, NAD(+)-dependent [Yersinia pestis biovar Orientalis str. India 195] gi|229901826|ref|ZP_04516947.1| DNA ligase, NAD(+)-dependent [Yersinia pestis Nepal516] gi|270490015|ref|ZP_06207089.1| DNA ligase (NAD(+)) [Yersinia pestis KIM D27] gi|122980211|sp|Q1CJV7|DNLJ_YERPN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|123372308|sp|Q1C5X9|DNLJ_YERPA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|123776939|sp|Q7CJF3|DNLJ_YERPE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166216255|sp|A4TMG4|DNLJ_YERPP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781914|sp|A9QZH0|DNLJ_YERPG RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|21958274|gb|AAM85063.1|AE013752_4 DNA ligase [Yersinia pestis KIM 10] gi|45437255|gb|AAS62807.1| DNA ligase [Yersinia pestis biovar Microtus str. 91001] gi|108775204|gb|ABG17723.1| DNA ligase [Yersinia pestis Nepal516] gi|108780085|gb|ABG14143.1| DNA ligase [Yersinia pestis Antiqua] gi|115348649|emb|CAL21593.1| DNA ligase [Yersinia pestis CO92] gi|145211069|gb|ABP40476.1| DNA ligase [Yersinia pestis Pestoides F] gi|149291559|gb|EDM41633.1| DNA ligase [Yersinia pestis CA88-4125] gi|162353487|gb|ABX87435.1| DNA ligase, NAD-dependent [Yersinia pestis Angola] gi|165911711|gb|EDR30369.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Orientalis str. IP275] gi|165921254|gb|EDR38478.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Orientalis str. F1991016] gi|165989949|gb|EDR42250.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Antiqua str. E1979001] gi|166206451|gb|EDR50931.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Antiqua str. B42003004] gi|166960827|gb|EDR56848.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051421|gb|EDR62829.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056326|gb|EDR66095.1| DNA ligase, NAD-dependent [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680722|gb|EEO76817.1| DNA ligase, NAD(+)-dependent [Yersinia pestis Nepal516] gi|229687549|gb|EEO79622.1| DNA ligase, NAD(+)-dependent [Yersinia pestis biovar Orientalis str. India 195] gi|229694947|gb|EEO84994.1| DNA ligase, NAD(+)-dependent [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701454|gb|EEO89482.1| DNA ligase, NAD(+)-dependent [Yersinia pestis Pestoides A] gi|270338519|gb|EFA49296.1| DNA ligase (NAD(+)) [Yersinia pestis KIM D27] Length = 670 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P Sbjct: 2 ESIIQQINQLRTSLRHHEHQYHVLDAPEIPDAEYDRMMQQLRDLEAQHPELVTNDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|327394702|dbj|BAK12124.1| DNA ligase LigA [Pantoea ananatis AJ13355] Length = 672 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L HH+ Y+ +D P D YDR+ L L+EQ P+L D P VG Sbjct: 8 ITELRTTLRHHEYLYHVMDAPEVPDAEYDRLMRELRELEEQHPDLITPDSPTQRVG 63 >gi|291618312|ref|YP_003521054.1| LigA [Pantoea ananatis LMG 20103] gi|291153342|gb|ADD77926.1| LigA [Pantoea ananatis LMG 20103] Length = 672 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L HH+ Y+ +D P D YDR+ L L+EQ P+L D P VG Sbjct: 8 ITELRTTLRHHEYLYHVMDAPEVPDAEYDRLMRELRELEEQHPDLITPDSPTQRVG 63 >gi|114767408|ref|ZP_01446210.1| DNA ligase, NAD-dependent [Pelagibaca bermudensis HTCC2601] gi|114540493|gb|EAU43572.1| DNA ligase, NAD-dependent [Roseovarius sp. HTCC2601] Length = 757 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 36/69 (52%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V +LS+ +A E+E L + Y+ D P +D YD + R A++E+FPEL Sbjct: 14 DVEALSEDQARAELERLAGLLAQANLAYHTEDAPEISDADYDALKRRNVAIEERFPELKR 73 Query: 110 EDHPWNTVG 118 ED P VG Sbjct: 74 EDSPSEQVG 82 >gi|313106533|ref|ZP_07792762.1| DNA ligase [Pseudomonas aeruginosa 39016] gi|310879264|gb|EFQ37858.1| DNA ligase [Pseudomonas aeruginosa 39016] Length = 794 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 54 LSKGEAMIE-VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++ +A E + L H YY LD+P D YDR+ L AL+ ++P+L D Sbjct: 1 MTDTQAAAERIAQLRTELDTHNYRYYVLDEPSIPDAEYDRLFRELQALETEYPQLLTPDS 60 Query: 113 PWNTV 117 P V Sbjct: 61 PTQRV 65 >gi|296390104|ref|ZP_06879579.1| NAD-dependent DNA ligase LigA [Pseudomonas aeruginosa PAb1] Length = 794 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 54 LSKGEAMIE-VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++ +A E + L H YY LD+P D YDR+ L AL+ ++P+L D Sbjct: 1 MTDTQAAAERIAQLRTELDTHNYRYYVLDEPSIPDAEYDRLFRELQALETEYPQLLTPDS 60 Query: 113 PWNTV 117 P V Sbjct: 61 PTQRV 65 >gi|320014458|gb|ADV98029.1| DNA ligase, NAD(+)-dependent [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 670 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P Sbjct: 2 ESIIQQINQLRTSLRHHEHQYHVLDAPEIPDAEYDRMMQQLRDLEAQHPELVTNDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|261822799|ref|YP_003260905.1| NAD-dependent DNA ligase LigA [Pectobacterium wasabiae WPP163] gi|261606812|gb|ACX89298.1| DNA ligase, NAD-dependent [Pectobacterium wasabiae WPP163] Length = 681 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 29/60 (48%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + V L ++ HH+ Y+ D P D YD++ + L AL+ PEL D P VG Sbjct: 11 VALRVAELRRVLRHHEYKYHVEDAPEIPDSEYDKLMQELKALEADHPELVTSDSPTQRVG 70 >gi|218754780|ref|ZP_03533576.1| NAD-dependent DNA ligase LigA [Mycobacterium tuberculosis GM 1503] gi|289763195|ref|ZP_06522573.1| DNA ligase [NAD dependent] ligA [Mycobacterium tuberculosis GM 1503] gi|289710701|gb|EFD74717.1| DNA ligase [NAD dependent] ligA [Mycobacterium tuberculosis GM 1503] Length = 690 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 35/71 (49%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + + E + + + L + HQ YY D P+ +D +D + RL+AL+EQ PEL Sbjct: 2 SSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPEL 61 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 62 RTPDSPTQLVG 72 >gi|284047985|ref|YP_003398324.1| DNA ligase, NAD-dependent [Acidaminococcus fermentans DSM 20731] gi|283952206|gb|ADB47009.1| DNA ligase, NAD-dependent [Acidaminococcus fermentans DSM 20731] Length = 675 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 34/67 (50%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + ++K A ++ L + + YY D+PL TD YD + L AL+ ++PEL D Sbjct: 2 SEMTKEAAAARIDQLRAVMKKNSYLYYVQDNPLITDAEYDAMMRELKALEAEYPELVTPD 61 Query: 112 HPWNTVG 118 P VG Sbjct: 62 SPSQHVG 68 >gi|116049473|ref|YP_791724.1| NAD-dependent DNA ligase LigA [Pseudomonas aeruginosa UCBPP-PA14] gi|122258581|sp|Q02K12|DNLJ_PSEAB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|115584694|gb|ABJ10709.1| DNA ligase [Pseudomonas aeruginosa UCBPP-PA14] Length = 794 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 54 LSKGEAMIE-VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++ +A E + L H YY LD+P D YDR+ L AL+ ++P+L D Sbjct: 1 MTDTQAAAERIAQLRTELDTHNYRYYVLDEPSIPDAEYDRLFRELQALETEYPQLLTPDS 60 Query: 113 PWNTV 117 P V Sbjct: 61 PTQRV 65 >gi|220935192|ref|YP_002514091.1| DNA ligase (NAD(+)) [Thioalkalivibrio sp. HL-EbGR7] gi|254781444|sp|B8GTL0|DNLJ_THISH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219996502|gb|ACL73104.1| DNA ligase (NAD(+)) [Thioalkalivibrio sp. HL-EbGR7] Length = 675 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 27/63 (42%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + V L +H YY LDDP D YD + L L+ ++PEL D P Sbjct: 5 PEKVRKRVASLRDELDYHNHRYYVLDDPEIPDAAYDALMRELQDLEAKYPELVTPDSPTQ 64 Query: 116 TVG 118 VG Sbjct: 65 RVG 67 >gi|163794455|ref|ZP_02188426.1| NAD-dependent DNA ligase [alpha proteobacterium BAL199] gi|159180179|gb|EDP64702.1| NAD-dependent DNA ligase [alpha proteobacterium BAL199] Length = 696 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 33/69 (47%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K V LS EA E+ L + Y+ D P+ TD YD + R A++E+FP+L Sbjct: 10 KPVEELSDAEAKAELRRLSDAISEADRQYHVEDAPVLTDAEYDALRRRNQAIEERFPDLK 69 Query: 109 DEDHPWNTV 117 D P V Sbjct: 70 LADSPSERV 78 >gi|157363572|ref|YP_001470339.1| DNA ligase, NAD-dependent [Thermotoga lettingae TMO] gi|190359296|sp|A8F541|DNLJ_THELT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157314176|gb|ABV33275.1| DNA ligase, NAD-dependent [Thermotoga lettingae TMO] Length = 678 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 33/63 (52%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + +E L + +H YY L DP+ +D YDR+ + L L++++PEL D P Sbjct: 4 PEDIKKRIEKLREEIEYHNYRYYVLADPIISDEEYDRLMQELIELEKKYPELVTPDSPSQ 63 Query: 116 TVG 118 VG Sbjct: 64 RVG 66 >gi|167038089|ref|YP_001665667.1| DNA ligase, NAD-dependent [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116496|ref|YP_004186655.1| NAD-dependent DNA ligase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|254781439|sp|B0KBN6|DNLJ_THEP3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166856923|gb|ABY95331.1| DNA ligase, NAD-dependent [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929587|gb|ADV80272.1| DNA ligase, NAD-dependent [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 662 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + +H YY LD P +D YD + L L+E++PEL D P VG Sbjct: 4 KERIKELREKINYHNYRYYVLDQPEISDYEYDMLMRELIELEEKYPELKTPDSPSQRVG 62 >gi|167039197|ref|YP_001662182.1| DNA ligase, NAD-dependent [Thermoanaerobacter sp. X514] gi|256752857|ref|ZP_05493696.1| DNA ligase, NAD-dependent [Thermoanaerobacter ethanolicus CCSD1] gi|300913208|ref|ZP_07130525.1| DNA ligase, NAD-dependent [Thermoanaerobacter sp. X561] gi|307723778|ref|YP_003903529.1| NAD-dependent DNA ligase [Thermoanaerobacter sp. X513] gi|254781440|sp|B0K3S1|DNLJ_THEPX RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166853437|gb|ABY91846.1| DNA ligase, NAD-dependent [Thermoanaerobacter sp. X514] gi|256748259|gb|EEU61324.1| DNA ligase, NAD-dependent [Thermoanaerobacter ethanolicus CCSD1] gi|300889893|gb|EFK85038.1| DNA ligase, NAD-dependent [Thermoanaerobacter sp. X561] gi|307580839|gb|ADN54238.1| DNA ligase, NAD-dependent [Thermoanaerobacter sp. X513] Length = 662 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + +H YY LD P +D YD + L L+E++PEL D P VG Sbjct: 4 KERIKELREKINYHNYRYYVLDQPEISDYEYDMLMRELIELEEKYPELKTPDSPSQRVG 62 >gi|227498670|ref|ZP_03928814.1| DNA ligase [Acidaminococcus sp. D21] gi|226904126|gb|EEH90044.1| DNA ligase [Acidaminococcus sp. D21] Length = 674 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++K EA+++ + L K + YY D P TD YD + +L A++ ++PEL D P Sbjct: 1 MTKQEALLKAQALRKELERNSYLYYVEDMPTITDAEYDSLMRQLRAIEAEYPELVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQHVG 65 >gi|298293088|ref|YP_003695027.1| DNA ligase, NAD-dependent [Starkeya novella DSM 506] gi|296929599|gb|ADH90408.1| DNA ligase, NAD-dependent [Starkeya novella DSM 506] Length = 725 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 33/76 (43%) Query: 43 SWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQE 102 S V L+ EA E L H + YY+ D P +D YD + R +A++ Sbjct: 2 SARTPDIDVEKLTADEAAKEHARLGDEIAGHDRRYYQDDAPSVSDADYDALRRRYEAIEA 61 Query: 103 QFPELFDEDHPWNTVG 118 QFPEL D VG Sbjct: 62 QFPELKGIDSLSEKVG 77 >gi|227114832|ref|ZP_03828488.1| NAD-dependent DNA ligase LigA [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 684 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + V L ++ HH+ Y+ D P D YD++ + L AL+ PEL D P VG Sbjct: 14 AALRVAELRRVLRHHEYKYHVEDAPEIPDIEYDKLMQELKALEADHPELVTSDSPTQRVG 73 >gi|312962450|ref|ZP_07776941.1| DNA ligase [Pseudomonas fluorescens WH6] gi|311283377|gb|EFQ61967.1| DNA ligase [Pseudomonas fluorescens WH6] Length = 789 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L H Y+ LD+P D YDR+ L AL+ + PEL D P VG Sbjct: 4 AHTRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEAEHPELVTRDSPTQRVG 63 >gi|77458028|ref|YP_347533.1| NAD-dependent DNA ligase LigA [Pseudomonas fluorescens Pf0-1] gi|123731132|sp|Q3KFB2|DNLJ_PSEPF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|77382031|gb|ABA73544.1| DNA ligase [Pseudomonas fluorescens Pf0-1] Length = 785 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L H Y+ LD+P D YDR+ L AL+ PEL D P VG Sbjct: 4 AKDRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEAANPELITSDSPTQRVG 63 >gi|308050127|ref|YP_003913693.1| DNA ligase, NAD-dependent [Ferrimonas balearica DSM 9799] gi|307632317|gb|ADN76619.1| DNA ligase, NAD-dependent [Ferrimonas balearica DSM 9799] Length = 685 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 +S +A +E L ++ + YY LD+P D YDR+ L AL+ + P L Sbjct: 5 PPKNDMS--QAKDRIEQLSQLLNDYNHQYYVLDNPSVPDAEYDRLMRELQALEAEHPALR 62 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 63 QPDSPTQRVG 72 >gi|121998657|ref|YP_001003444.1| DNA ligase, NAD-dependent [Halorhodospira halophila SL1] gi|166215780|sp|A1WY80|DNLJ_HALHL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|121590062|gb|ABM62642.1| DNA ligase, NAD-dependent [Halorhodospira halophila SL1] Length = 711 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 28/66 (42%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + ++ +A + L H YY LD P +D YD + L L+ +P+L D Sbjct: 4 PTATREQAQQRMAQLRGEISEHDYHYYVLDRPTISDAEYDALFRELQRLEAAYPDLVSSD 63 Query: 112 HPWNTV 117 P V Sbjct: 64 SPTQRV 69 >gi|251793989|ref|YP_003008721.1| NAD-dependent DNA ligase LigA [Aggregatibacter aphrophilus NJ8700] gi|247535388|gb|ACS98634.1| DNA ligase, NAD-dependent [Aggregatibacter aphrophilus NJ8700] Length = 671 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 32/60 (53%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K +H+ Y+ LD+P D YDR+ +L AL++Q P L D P VG Sbjct: 5 IQQQIDDLRKTLRYHEYQYHVLDEPQIPDSEYDRLFHQLKALEQQHPALITADSPTQRVG 64 >gi|329297490|ref|ZP_08254826.1| NAD-dependent DNA ligase LigA [Plautia stali symbiont] Length = 672 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ P+L D P VG Sbjct: 4 VQEQITALRTTLRHHEYLYHVMDTPEIPDAEYDRLMRELRELESAHPDLITPDSPTQRVG 63 >gi|53803401|ref|YP_114852.1| DNA ligase, NAD-dependent [Methylococcus capsulatus str. Bath] gi|81681278|sp|Q604U8|DNLJ_METCA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|53757162|gb|AAU91453.1| DNA ligase, NAD-dependent [Methylococcus capsulatus str. Bath] Length = 673 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 33/63 (52%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 E + + L + H YYRLDDPL TD YDR+ L A++ ++PEL D P Sbjct: 4 PAEVVEKARKLREEIEFHNVRYYRLDDPLITDAEYDRLMAELLAIEARYPELVTPDSPTQ 63 Query: 116 TVG 118 VG Sbjct: 64 RVG 66 >gi|119774653|ref|YP_927393.1| DNA ligase (NAD(+)) [Shewanella amazonensis SB2B] gi|166216239|sp|A1S5R7|DNLJ_SHEAM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|119767153|gb|ABL99723.1| DNA ligase (NAD(+)) [Shewanella amazonensis SB2B] Length = 681 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 30/64 (46%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + + E++ L H YY D P D YDR+ +L AL+ ++P+ + D P Sbjct: 10 TIMQVKAEIQRLTAEINRHNIAYYVQDAPSIPDAEYDRLMNQLKALEAEYPQFAEPDSPT 69 Query: 115 NTVG 118 VG Sbjct: 70 QRVG 73 >gi|49475845|ref|YP_033886.1| NAD-dependent DNA ligase LigA [Bartonella henselae str. Houston-1] gi|81647763|sp|Q6G2R5|DNLJ_BARHE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|49238653|emb|CAF27899.1| DNA ligase [Bartonella henselae str. Houston-1] Length = 716 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 34/68 (50%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + +L+ EA E+E+L K H Y R D P +D YD + R ++ FPEL Sbjct: 6 IQNLTALEAASELEWLAKEITRHDVLYNRNDQPEISDAEYDALRRRNAEIEALFPELIRP 65 Query: 111 DHPWNTVG 118 D P + +G Sbjct: 66 DSPSHKIG 73 >gi|326574755|gb|EGE24691.1| NAD-dependent DNA ligase [Moraxella catarrhalis 101P30B1] Length = 691 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 37/73 (50%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D +K S + + + ++ L+K+ H YY +D P +D YD + L L++Q P Sbjct: 10 DTSKNNPSKANDQIIAQMRALIKLLKRHNHAYYVMDAPTISDDEYDGLRRTLMMLEQQHP 69 Query: 106 ELFDEDHPWNTVG 118 L D P NTVG Sbjct: 70 NLIQPDSPINTVG 82 >gi|326572929|gb|EGE22914.1| NAD-dependent DNA ligase [Moraxella catarrhalis CO72] Length = 691 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 37/73 (50%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D +K S + + + ++ L+K+ H YY +D P +D YD + L L++Q P Sbjct: 10 DTSKNNPSKANDQIIAQMRALIKLLKRHNHAYYVMDAPTISDDEYDGLRRTLMMLEQQHP 69 Query: 106 ELFDEDHPWNTVG 118 L D P NTVG Sbjct: 70 NLIQPDSPINTVG 82 >gi|326569993|gb|EGE20040.1| NAD-dependent DNA ligase [Moraxella catarrhalis BC1] Length = 691 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 37/73 (50%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D +K S + + + ++ L+K+ H YY +D P +D YD + L L++Q P Sbjct: 10 DTSKNNPSKANDQIIAQMRALIKLLKRHNHAYYVMDAPTISDDEYDGLRRTLMMLEQQHP 69 Query: 106 ELFDEDHPWNTVG 118 L D P NTVG Sbjct: 70 NLIQPDSPINTVG 82 >gi|326564268|gb|EGE14498.1| NAD-dependent DNA ligase [Moraxella catarrhalis 103P14B1] Length = 691 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 37/73 (50%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D +K S + + + ++ L+K+ H YY +D P +D YD + L L++Q P Sbjct: 10 DTSKNNPSKANDQIIAQMRALIKLLKRHNHAYYVMDAPTISDDEYDGLRRTLMMLEQQHP 69 Query: 106 ELFDEDHPWNTVG 118 L D P NTVG Sbjct: 70 NLIQPDSPINTVG 82 >gi|296113927|ref|YP_003627865.1| NAD-dependent DNA ligase [Moraxella catarrhalis RH4] gi|295921621|gb|ADG61972.1| NAD-dependent DNA ligase [Moraxella catarrhalis RH4] Length = 691 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 37/73 (50%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D +K S + + + ++ L+K+ H YY +D P +D YD + L L++Q P Sbjct: 10 DTSKNNPSKANDQIIAQMRALIKLLKRHNHAYYVMDAPTISDDEYDGLRRTLMMLEQQHP 69 Query: 106 ELFDEDHPWNTVG 118 L D P NTVG Sbjct: 70 NLIQPDSPINTVG 82 >gi|284006788|emb|CBA72055.1| DNA ligase [Arsenophonus nasoniae] Length = 670 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + HH+ Y+ LD P D YDR+ + L L+ + PE D P VG Sbjct: 8 LARLKQQLRHHEYLYHVLDTPEIPDAEYDRLMQELKKLEAEHPEWITADSPTQRVG 63 >gi|126640855|ref|YP_001083839.1| DNA ligase [Acinetobacter baumannii ATCC 17978] gi|322506977|gb|ADX02431.1| DNA ligase [Acinetobacter baumannii 1656-2] gi|323516844|gb|ADX91225.1| DNA ligase, NAD-dependent [Acinetobacter baumannii TCDC-AB0715] Length = 669 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 31/56 (55%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L+++ H YY +D P +D YD + +L AL+EQ+PEL D P VG Sbjct: 1 MRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPELVQADSPTTKVG 56 >gi|294635487|ref|ZP_06713972.1| DNA ligase, NAD-dependent [Edwardsiella tarda ATCC 23685] gi|291091145|gb|EFE23706.1| DNA ligase, NAD-dependent [Edwardsiella tarda ATCC 23685] Length = 675 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 32/60 (53%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L HH+ YY LD+P TD YDR+ +L AL+ +P+L D P VG Sbjct: 5 IEQQLEQLRAALRHHEYQYYVLDEPQVTDAEYDRLMMQLKALESDYPQLVTADSPSQRVG 64 >gi|49474446|ref|YP_032488.1| NAD-dependent DNA ligase LigA [Bartonella quintana str. Toulouse] gi|81646941|sp|Q6FZ81|DNLJ_BARQU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|49239950|emb|CAF26355.1| DNA ligase [Bartonella quintana str. Toulouse] Length = 719 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 34/68 (50%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + +L+ EA E+E+L K H Y R D P +D YD + R ++ FPEL Sbjct: 6 IKNLTALEAESELEWLAKEIARHDVLYNRDDQPEISDAEYDALRRRNAEIEALFPELIRS 65 Query: 111 DHPWNTVG 118 D P + +G Sbjct: 66 DSPSHKIG 73 >gi|26990965|ref|NP_746390.1| NAD-dependent DNA ligase LigA [Pseudomonas putida KT2440] gi|81439923|sp|Q88F25|DNLJ_PSEPK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|24985989|gb|AAN69854.1|AE016624_5 DNA ligase, NAD-dependent [Pseudomonas putida KT2440] Length = 776 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L H YY LD+P D YDR+ L AL+ + P L D P VG Sbjct: 3 AETRILELRAELDQHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPHLVTPDSPTQRVG 62 >gi|307266289|ref|ZP_07547829.1| DNA ligase, NAD-dependent [Thermoanaerobacter wiegelii Rt8.B1] gi|306918667|gb|EFN48901.1| DNA ligase, NAD-dependent [Thermoanaerobacter wiegelii Rt8.B1] Length = 662 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E ++ L + +H YY LD P +D YD + L L+E++PE D P V Sbjct: 2 EPKERIKELREKINYHNYRYYVLDQPEISDYEYDMLMRELIELEEKYPEFKTPDSPSQRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|258514074|ref|YP_003190296.1| DNA ligase, NAD-dependent [Desulfotomaculum acetoxidans DSM 771] gi|257777779|gb|ACV61673.1| DNA ligase, NAD-dependent [Desulfotomaculum acetoxidans DSM 771] Length = 677 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + EA V L + H YY +D+P+ D YDR+ L AL++QFP+L E P Sbjct: 1 MELKEAGKRVLELRREIEEHNYNYYVMDNPVIGDAEYDRLMLELTALEQQFPDLLSEHSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|29140957|ref|NP_804299.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213160907|ref|ZP_03346617.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213424270|ref|ZP_03357114.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213583650|ref|ZP_03365476.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213650852|ref|ZP_03380905.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|29136582|gb|AAO68148.1| DNA ligase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 671 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEILDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|16761347|ref|NP_456964.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|81513487|sp|Q8Z4W4|DNLJ_SALTI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|25294013|pir||AI0809 DNA ligase (NAD) (EC 6.5.1.2) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503646|emb|CAD07659.1| DNA ligase [Salmonella enterica subsp. enterica serovar Typhi] Length = 671 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEILDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|294085891|ref|YP_003552651.1| DNA ligase (NAD+) [Candidatus Puniceispirillum marinum IMCC1322] gi|292665466|gb|ADE40567.1| DNA ligase (NAD+) [Candidatus Puniceispirillum marinum IMCC1322] Length = 696 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 35/70 (50%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 + +S +A E+ YL + +H + Y+ D P +D YD + R +AL+ FPEL Sbjct: 6 PDPSKMSADDAAQELAYLAERIAYHDRKYHGEDAPDISDADYDMLVARNNALEASFPELI 65 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 66 RPDSPSQRVG 75 >gi|227328979|ref|ZP_03833003.1| NAD-dependent DNA ligase LigA [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 684 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + V L ++ HH+ Y+ D P D YD++ + L +L+ PEL D P VG Sbjct: 14 AALRVAELRRVLRHHEYKYHVEDAPEIPDVEYDKLMQELKSLEAAHPELVTSDSPTQRVG 73 >gi|94497003|ref|ZP_01303577.1| DNA ligase, NAD-dependent [Sphingomonas sp. SKA58] gi|94423679|gb|EAT08706.1| DNA ligase, NAD-dependent [Sphingomonas sp. SKA58] Length = 703 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 L++ EA + L K H + Y+ D P +D YD + +AL+ FP L Sbjct: 2 TDPAMLTEAEAANRLMRLAKEVAKHNRLYHDQDAPEISDADYDALIRENNALEAAFPHLI 61 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 62 RADSPNAQVG 71 >gi|317401960|gb|EFV82562.1| DNA ligase [Achromobacter xylosoxidans C54] Length = 699 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 24/60 (40%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A L H YY DDP +D YDR+ L L+ PEL + P VG Sbjct: 9 AAETAARLRAEIEQHNVRYYVYDDPSISDAEYDRLMRELQDLEAAHPELVTPESPTQRVG 68 >gi|326559356|gb|EGE09783.1| NAD-dependent DNA ligase [Moraxella catarrhalis 7169] Length = 691 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 37/73 (50%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 + +K S + + + ++ L+K+ H YY +D P +D YD + L L++Q P Sbjct: 10 NTSKNNPSKANDQIIAQMRALIKLLKRHNHAYYVMDAPTISDDEYDGLRRTLMMLEQQHP 69 Query: 106 ELFDEDHPWNTVG 118 L D P NTVG Sbjct: 70 NLIQPDSPINTVG 82 >gi|313497885|gb|ADR59251.1| LigA [Pseudomonas putida BIRD-1] Length = 776 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L H YY LD+P D YDR+ L AL+ + P L D P VG Sbjct: 3 AETRILELRAELDQHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPHLVTPDSPTQRVG 62 >gi|104780921|ref|YP_607419.1| NAD-dependent DNA ligase LigA [Pseudomonas entomophila L48] gi|122985912|sp|Q1ICK0|DNLJ_PSEE4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|95109908|emb|CAK14613.1| NAD-dependent DNA ligase [Pseudomonas entomophila L48] Length = 784 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L H YY LD+P D YDR+ L AL+ + P+L D P VG Sbjct: 3 AESRIHALRAELDQHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPQLVTADSPTQRVG 62 >gi|291296053|ref|YP_003507451.1| DNA ligase NAD-dependent [Meiothermus ruber DSM 1279] gi|290471012|gb|ADD28431.1| DNA ligase, NAD-dependent [Meiothermus ruber DSM 1279] Length = 666 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L ++ +H YY LD P +D YDR+ + L AL+E PEL D P TVG Sbjct: 5 KQRIMELRELIRYHNYRYYVLDKPEISDAEYDRLLQELRALEEAHPELIIPDSPTQTVG 63 >gi|148546832|ref|YP_001266934.1| NAD-dependent DNA ligase LigA [Pseudomonas putida F1] gi|190359274|sp|A5W0U0|DNLJ_PSEP1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|148510890|gb|ABQ77750.1| DNA ligase, NAD-dependent [Pseudomonas putida F1] Length = 776 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L H YY LD+P D YDR+ L AL+ + P L D P VG Sbjct: 3 AETRILELRAELDQHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPHLVTPDSPTQRVG 62 >gi|226327977|ref|ZP_03803495.1| hypothetical protein PROPEN_01868 [Proteus penneri ATCC 35198] gi|225203681|gb|EEG86035.1| hypothetical protein PROPEN_01868 [Proteus penneri ATCC 35198] Length = 505 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L HH+ Y+ +D P D YDR+ L AL+ ++PEL D P VG Sbjct: 6 QQKIDKLRVTLRHHEYLYHVMDAPEIPDAEYDRLMNELKALEAEYPELITSDSPTQRVG 64 >gi|300717845|ref|YP_003742648.1| DNA ligase [Erwinia billingiae Eb661] gi|299063681|emb|CAX60801.1| DNA ligase [Erwinia billingiae Eb661] Length = 672 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +DDP D YDR+ L L++ PEL D P Sbjct: 2 ESVQDKITALQTTLRHHEYQYHVMDDPEVPDAEYDRLMRELRELEQAHPELVTADSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|242238286|ref|YP_002986467.1| NAD-dependent DNA ligase LigA [Dickeya dadantii Ech703] gi|242130343|gb|ACS84645.1| DNA ligase, NAD-dependent [Dickeya dadantii Ech703] Length = 684 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 32/74 (43%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + + K + A ++++ L +H+ Y+ D P D YD++ L L++ Sbjct: 1 MSEKKPMPMNDTSAAAVQIDALRAQLRYHEYKYHVEDAPEIPDAEYDKLMNALKLLEQAH 60 Query: 105 PELFDEDHPWNTVG 118 PE D P VG Sbjct: 61 PEWVTSDSPTQRVG 74 >gi|289522353|ref|ZP_06439207.1| DNA ligase, NAD-dependent [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504189|gb|EFD25353.1| DNA ligase, NAD-dependent [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 674 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 31/64 (48%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 GEA E L K H +YY LD P+ TD YD + L L+ +FPE+ D P Sbjct: 4 DLGEAKKRAEELRKEIEKHNYYYYVLDSPVITDEEYDALYRGLVELERRFPEIITPDSPT 63 Query: 115 NTVG 118 VG Sbjct: 64 QRVG 67 >gi|254480787|ref|ZP_05094034.1| DNA ligase, NAD-dependent [marine gamma proteobacterium HTCC2148] gi|214039370|gb|EEB80030.1| DNA ligase, NAD-dependent [marine gamma proteobacterium HTCC2148] Length = 677 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ EV L YY LDDP D YDR +L +EQFPEL ED P Sbjct: 1 MTDSATQAEVLQLRTQLREWNYRYYVLDDPSVPDAEYDRYLRQLQGFEEQFPELVTEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|289577826|ref|YP_003476453.1| DNA ligase, NAD-dependent [Thermoanaerobacter italicus Ab9] gi|289527539|gb|ADD01891.1| DNA ligase, NAD-dependent [Thermoanaerobacter italicus Ab9] Length = 662 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + +H YY LD P +D YD + L L+E++PEL D P VG Sbjct: 4 KERINELREKINYHNYRYYVLDQPEISDYEYDMLMRELIELEEKYPELKTPDSPSQRVG 62 >gi|33597876|ref|NP_885519.1| DNA ligase [Bordetella parapertussis 12822] gi|81425567|sp|Q7W0T4|DNLJ_BORPA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|33574305|emb|CAE38638.1| DNA ligase [Bordetella parapertussis] Length = 696 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 3/64 (4%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + +A + L H YY DDP D YD + L AL+ + PEL D P Sbjct: 7 TPQQA---IARLRAEIEQHNIRYYVHDDPSVPDAEYDALMRDLQALEAEHPELVTPDSPT 63 Query: 115 NTVG 118 VG Sbjct: 64 QRVG 67 >gi|50084060|ref|YP_045570.1| DNA ligase [Acinetobacter sp. ADP1] gi|81393600|sp|Q6FDW0|DNLJ_ACIAD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|49530036|emb|CAG67748.1| DNA ligase [Acinetobacter sp. ADP1] Length = 676 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 36/65 (55%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + + ++ L+++ H YY +D P TD YD++ +L AL+ ++PEL D P Sbjct: 2 MQPADIVAQMRQLIQLIAKHNHAYYVMDQPSITDNEYDQLFHQLKALEAEYPELTQADTP 61 Query: 114 WNTVG 118 N VG Sbjct: 62 TNRVG 66 >gi|225181787|ref|ZP_03735225.1| DNA ligase, NAD-dependent [Dethiobacter alkaliphilus AHT 1] gi|225167561|gb|EEG76374.1| DNA ligase, NAD-dependent [Dethiobacter alkaliphilus AHT 1] Length = 667 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 37/65 (56%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A+ VE L + H Y+ LD+P +D +D + ++L+A++ QFP+L D P Sbjct: 1 MDRQQALETVEKLRQEIDDHNYRYHVLDEPQISDAEFDDLMQKLEAMEAQFPDLVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|268323600|emb|CBH37188.1| DNA ligase [uncultured archaeon] Length = 667 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 30/56 (53%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + +H YY LD+P +D YDR+ L+ L+ ++PEL D P +G Sbjct: 14 IAQLREKIHYHNYRYYVLDEPEISDAEYDRLFVELEELERKYPELITPDSPTQRIG 69 >gi|16125769|ref|NP_420333.1| DNA ligase, NAD-dependent [Caulobacter crescentus CB15] gi|221234527|ref|YP_002516963.1| NAD-dependent DNA ligase [Caulobacter crescentus NA1000] gi|81535469|sp|Q9A842|DNLJ_CAUCR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781280|sp|B8H5Y7|DNLJ_CAUCN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|13422903|gb|AAK23501.1| DNA ligase, NAD-dependent [Caulobacter crescentus CB15] gi|220963699|gb|ACL95055.1| NAD-dependent DNA ligase [Caulobacter crescentus NA1000] Length = 783 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 36/72 (50%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 V L++ +A+ ++E L + H Y++ D+P +D YD + R ++ +FP Sbjct: 2 SQIPVADLTEAQAVEDLERLADLLATHDIAYHQEDNPTVSDAEYDALKRRNLDIETRFPH 61 Query: 107 LFDEDHPWNTVG 118 L ++ P VG Sbjct: 62 LVRDNSPSMRVG 73 >gi|270262950|ref|ZP_06191221.1| DNA ligase, NAD-dependent [Serratia odorifera 4Rx13] gi|270043634|gb|EFA16727.1| DNA ligase, NAD-dependent [Serratia odorifera 4Rx13] Length = 673 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L HH+ Y+ LD P D YDR+ L L+ PEL D P Sbjct: 2 ESIIQQINQLRTSLRHHEYQYHVLDAPEVPDAEYDRLMNELRELENAHPELITADSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|253999028|ref|YP_003051091.1| DNA ligase, NAD-dependent [Methylovorus sp. SIP3-4] gi|253985707|gb|ACT50564.1| DNA ligase, NAD-dependent [Methylovorus sp. SIP3-4] Length = 699 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 31/67 (46%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 +++ +++ L + + YY LDDP D YDR+ L AL+ PEL D Sbjct: 17 ATVTFATPEVQIRQLREQINLYNYQYYVLDDPSVPDSEYDRLFRELQALEHAHPELLTPD 76 Query: 112 HPWNTVG 118 P VG Sbjct: 77 SPTQRVG 83 >gi|289432483|ref|YP_003462356.1| DNA ligase, NAD-dependent [Dehalococcoides sp. GT] gi|288946203|gb|ADC73900.1| DNA ligase, NAD-dependent [Dehalococcoides sp. GT] Length = 680 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 30/58 (51%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 IEVE L + H + YY D+P +D YD + RL L+E PEL D P VG Sbjct: 9 IEVENLRREINRHNQLYYVQDNPEISDAQYDTLISRLKELEEAHPELVTPDSPTQKVG 66 >gi|262280095|ref|ZP_06057880.1| DNA ligase [Acinetobacter calcoaceticus RUH2202] gi|262260446|gb|EEY79179.1| DNA ligase [Acinetobacter calcoaceticus RUH2202] Length = 692 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + ++ L+++ H YY +D P +D YD + +L AL+EQ+PE D P Sbjct: 14 MATTSVIEQMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPEQVQSDSP 73 Query: 114 WNTVG 118 VG Sbjct: 74 TTKVG 78 >gi|157371681|ref|YP_001479670.1| NAD-dependent DNA ligase LigA [Serratia proteamaculans 568] gi|190359284|sp|A8GHF2|DNLJ_SERP5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157323445|gb|ABV42542.1| DNA ligase, NAD-dependent [Serratia proteamaculans 568] Length = 673 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L HH+ Y+ LD P D YDR+ L AL+ PEL D P Sbjct: 2 ESIIQQINQLRTSLRHHEYQYHVLDAPEVPDAEYDRLMGELRALESAHPELITADSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|33602779|ref|NP_890339.1| DNA ligase [Bordetella bronchiseptica RB50] gi|81429836|sp|Q7WCJ7|DNLJ_BORBR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|33577221|emb|CAE35778.1| DNA ligase [Bordetella bronchiseptica RB50] Length = 696 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 3/64 (4%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + +A + L H YY DDP D YD + L AL+ + PEL D P Sbjct: 7 TPQQA---IARLRAEIEQHNIRYYVHDDPSVPDAEYDALMRDLQALEAEHPELVTPDSPT 63 Query: 115 NTVG 118 VG Sbjct: 64 QRVG 67 >gi|262369277|ref|ZP_06062605.1| DNA ligase [Acinetobacter johnsonii SH046] gi|262315345|gb|EEY96384.1| DNA ligase [Acinetobacter johnsonii SH046] Length = 679 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 32/58 (55%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L++I H YY +D P D YD++ +L AL+EQ+PE D P N VG Sbjct: 9 AQMRQLIQILAQHNHAYYVMDQPTIADSEYDQLFHQLKALEEQYPEYIQPDSPINKVG 66 >gi|320173862|gb|EFW49042.1| DNA ligase [Shigella dysenteriae CDC 74-1112] Length = 671 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + EL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHLELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|308187689|ref|YP_003931820.1| DNA ligase [Pantoea vagans C9-1] gi|308058199|gb|ADO10371.1| DNA ligase [Pantoea vagans C9-1] Length = 672 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L HH+ Y+ +D P D YDR+ L L+E+ P+L D P VG Sbjct: 8 ITELRTTLRHHEYLYHVMDAPEVPDAEYDRLMRELRQLEEEHPDLITPDSPTQRVG 63 >gi|229591993|ref|YP_002874112.1| NAD-dependent DNA ligase LigA [Pseudomonas fluorescens SBW25] gi|254781395|sp|C3JXX6|DNLJ_PSEFS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|229363859|emb|CAY51325.1| DNA ligase [Pseudomonas fluorescens SBW25] Length = 785 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L H Y+ LD+P D YDR+ L AL+ + P+L D P VG Sbjct: 4 AHTRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEAEHPDLVTRDSPTQRVG 63 >gi|50122504|ref|YP_051671.1| NAD-dependent DNA ligase LigA [Pectobacterium atrosepticum SCRI1043] gi|81644069|sp|Q6D165|DNLJ_ERWCT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|49613030|emb|CAG76481.1| DNA ligase [Pectobacterium atrosepticum SCRI1043] Length = 681 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 29/60 (48%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + V L ++ HH+ Y+ D P D YD++ + L AL+ PEL D P VG Sbjct: 4 VALRVAELRRVLRHHEYKYHVEDAPEIPDIEYDKLMQELKALEADHPELVTSDSPTQRVG 63 >gi|304398312|ref|ZP_07380186.1| DNA ligase, NAD-dependent [Pantoea sp. aB] gi|304354178|gb|EFM18551.1| DNA ligase, NAD-dependent [Pantoea sp. aB] Length = 672 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L HH+ Y+ +D P D YDR+ L L+E+ P+L D P VG Sbjct: 8 ITELRTTLRHHEYLYHVMDAPEVPDAEYDRLMRELRQLEEEHPDLITPDSPTQRVG 63 >gi|259502571|ref|ZP_05745473.1| DNA ligase [Lactobacillus antri DSM 16041] gi|259169461|gb|EEW53956.1| DNA ligase [Lactobacillus antri DSM 16041] Length = 678 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 37/74 (50%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 +DK V L+ A E+ L + + YY D+P D +YDR +RL L+++F Sbjct: 1 MDKQTPVDQLTLAAAKQEIAPLRQQLTKWGREYYEQDNPSVEDYVYDRAYQRLVELEQRF 60 Query: 105 PELFDEDHPWNTVG 118 PEL D P VG Sbjct: 61 PELKTSDSPTQHVG 74 >gi|317132010|ref|YP_004091324.1| DNA ligase, NAD-dependent [Ethanoligenens harbinense YUAN-3] gi|315469989|gb|ADU26593.1| DNA ligase, NAD-dependent [Ethanoligenens harbinense YUAN-3] Length = 661 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 27/61 (44%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A + L K H YY LD P D YDR+ L+ L+ PE+ D P V Sbjct: 2 DAAARAKELRKALSRHNYLYYVLDAPEIEDFEYDRMLRELEELEAAHPEIVTPDSPTQRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|253689765|ref|YP_003018955.1| DNA ligase, NAD-dependent [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756343|gb|ACT14419.1| DNA ligase, NAD-dependent [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 681 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 29/60 (48%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + V L ++ HH+ Y+ D P D YD++ + L AL+ PEL D P VG Sbjct: 11 VALRVAELRRVLRHHEYKYHVEDAPEIPDVEYDKLMQELKALEADHPELVTSDSPTQRVG 70 >gi|33594429|ref|NP_882073.1| DNA ligase [Bordetella pertussis Tohama I] gi|81424006|sp|Q7VRX7|DNLJ_BORPE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|33564504|emb|CAE43819.1| DNA ligase [Bordetella pertussis Tohama I] Length = 696 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 3/64 (4%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + +A + L H YY DDP D YD + L AL+ + PEL D P Sbjct: 7 TPQQA---IARLRAEIEQHNIRYYVHDDPSVPDAEYDALMRDLQALEAEHPELVTPDSPT 63 Query: 115 NTVG 118 VG Sbjct: 64 QRVG 67 >gi|15606063|ref|NP_213440.1| DNA ligase (NAD dependent) [Aquifex aeolicus VF5] gi|7673992|sp|O66880|DNLJ_AQUAE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|2983242|gb|AAC06838.1| DNA ligase (NAD dependent) [Aquifex aeolicus VF5] Length = 720 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 36/73 (49%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 L K K V LS EA E L ++ +H YY +P+ D YDR+ L +++++ Sbjct: 18 LRKIKDVKVLSFEEAKKLAEDLREVIRYHDYKYYVEANPVIPDYDYDRLFRALKEIEKKY 77 Query: 105 PELFDEDHPWNTV 117 PEL D P V Sbjct: 78 PELITPDSPTQRV 90 >gi|288958932|ref|YP_003449273.1| DNA ligase (NAD+) [Azospirillum sp. B510] gi|288911240|dbj|BAI72729.1| DNA ligase (NAD+) [Azospirillum sp. B510] Length = 788 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 8/83 (9%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 P+ R++ V +L+ +A ++ L HH + Y++ D P TD YD + Sbjct: 9 PDPRSI--------AVDALTPEQAAADLAALAAEIAHHDRLYHQQDQPEITDADYDALVR 60 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 R A++ +FPEL D P VG Sbjct: 61 RNLAIEARFPELRRADSPSLRVG 83 >gi|297544111|ref|YP_003676413.1| DNA ligase, NAD-dependent [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841886|gb|ADH60402.1| DNA ligase, NAD-dependent [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 662 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + +H YY LD P +D YD + L L+E++PEL D P VG Sbjct: 4 KERIKELREKINYHNYKYYVLDQPEISDYEYDMLMRELIELEEKYPELKTPDSPSQRVG 62 >gi|326562480|gb|EGE12798.1| NAD-dependent DNA ligase [Moraxella catarrhalis 46P47B1] gi|326567201|gb|EGE17321.1| NAD-dependent DNA ligase [Moraxella catarrhalis 12P80B1] gi|326568292|gb|EGE18374.1| NAD-dependent DNA ligase [Moraxella catarrhalis BC8] Length = 691 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 38/73 (52%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 + +K S + + + ++ L+K+ H YY +D P +DG YD + L L++Q P Sbjct: 10 NTSKNNPSKANDQIIAQMCALIKLLKRHNHAYYVMDAPTISDGEYDGLRRTLMMLEQQHP 69 Query: 106 ELFDEDHPWNTVG 118 L D P NTVG Sbjct: 70 NLIQPDSPINTVG 82 >gi|262375659|ref|ZP_06068891.1| DNA ligase, NAD-dependent [Acinetobacter lwoffii SH145] gi|262309262|gb|EEY90393.1| DNA ligase, NAD-dependent [Acinetobacter lwoffii SH145] Length = 679 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 34/62 (54%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L+++ H YY +D P D YD++ +L AL++Q+P+L D P + Sbjct: 5 ATVIAQMRQLIQLLAKHNHAYYVMDQPSIEDSEYDQLFHQLKALEQQYPDLIQSDSPTDK 64 Query: 117 VG 118 VG Sbjct: 65 VG 66 >gi|291557760|emb|CBL34877.1| DNA ligase, NAD-dependent [Eubacterium siraeum V10Sc8a] Length = 660 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K + E E L + H YY LDDP D YDR+ R+ ++ + PE+ E P Sbjct: 1 MDKEQIKSEYEQLCREVEQHNFNYYVLDDPTIEDDEYDRLMRRIKEIEAENPEIVSESSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQHVG 65 >gi|94971682|ref|YP_593730.1| DNA ligase, NAD-dependent [Candidatus Koribacter versatilis Ellin345] gi|122986011|sp|Q1IHJ4|DNLJ_ACIBL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|94553732|gb|ABF43656.1| DNA ligase, NAD-dependent [Candidatus Koribacter versatilis Ellin345] Length = 673 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 +K A + E L + +H+ YY LDDP +D YD + L AL+ + PEL D P Sbjct: 4 TKDPAK-QAEDLREKLRYHEHRYYVLDDPEISDADYDVMMNELKALEAKHPELLTPDSPT 62 Query: 115 NTVG 118 VG Sbjct: 63 QRVG 66 >gi|296126514|ref|YP_003633766.1| DNA ligase, NAD-dependent [Brachyspira murdochii DSM 12563] gi|296018330|gb|ADG71567.1| DNA ligase, NAD-dependent [Brachyspira murdochii DSM 12563] Length = 663 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 38/65 (58%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++K EA +++ L + +H K YY D+P D YD++ L+ L+ +FPEL +D P Sbjct: 1 MNKEEAKQKIKQLTETINYHNKLYYTDDNPEIEDYEYDKLFRELENLEREFPELKKDDSP 60 Query: 114 WNTVG 118 N VG Sbjct: 61 TNKVG 65 >gi|56479083|ref|YP_160672.1| NAD-dependent DNA ligase [Aromatoleum aromaticum EbN1] gi|81356392|sp|Q5NYU3|DNLJ_AZOSE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|56315126|emb|CAI09771.1| NAD-dependent DNA ligase [Aromatoleum aromaticum EbN1] Length = 681 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 26/58 (44%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + H YY LD P D YDR+ LDAL+ + PEL D P VG Sbjct: 9 ERAAQLRRELEAHDHAYYVLDAPTVPDAEYDRLFRELDALERRHPELLVPDSPTRRVG 66 >gi|183981708|ref|YP_001849999.1| NAD-dependent DNA ligase LigA [Mycobacterium marinum M] gi|254781377|sp|B2HIF0|DNLJ_MYCMM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|183175034|gb|ACC40144.1| DNA ligase [NAD dependent] LigA [Mycobacterium marinum M] Length = 687 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 34/61 (55%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + + + L + HQ YY D P+ TD +D + RL+AL+EQ+PEL D P V Sbjct: 4 EVLRQWQELAEQVREHQFRYYVRDAPVITDAEFDELLRRLEALEEQYPELRTPDSPTQLV 63 Query: 118 G 118 G Sbjct: 64 G 64 >gi|271501855|ref|YP_003334881.1| DNA ligase [Dickeya dadantii Ech586] gi|270345410|gb|ACZ78175.1| DNA ligase, NAD-dependent [Dickeya dadantii Ech586] Length = 683 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 26/64 (40%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 +VE L +H+ Y+ D P D YD + L L++ PEL D P Sbjct: 11 DIAAVAAQVEALRAQLRYHEYKYHVEDAPEIPDAEYDTLMNTLKVLEQAHPELVTPDSPT 70 Query: 115 NTVG 118 VG Sbjct: 71 QRVG 74 >gi|158521726|ref|YP_001529596.1| DNA ligase, NAD-dependent [Desulfococcus oleovorans Hxd3] gi|254781314|sp|A9A0L9|DNLJ_DESOH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|158510552|gb|ABW67519.1| DNA ligase, NAD-dependent [Desulfococcus oleovorans Hxd3] Length = 682 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 29/66 (43%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +L K EA V +L H YY D P +D YDR+ L L+ P+L D Sbjct: 4 TLDKSEAKERVTFLRNELHRHNHLYYIKDAPEISDAEYDRLFRELAELEALHPDLADPAS 63 Query: 113 PWNTVG 118 P VG Sbjct: 64 PTARVG 69 >gi|163856016|ref|YP_001630314.1| DNA ligase [Bordetella petrii DSM 12804] gi|254781264|sp|A9II69|DNLJ_BORPD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|163259744|emb|CAP42045.1| DNA ligase [Bordetella petrii] Length = 697 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 G+A V L H YY DDP +D YD + L L+ PEL + P Sbjct: 6 GQAAQRVAALRNEIEQHNVRYYVHDDPSVSDAEYDALMRELIQLETDHPELVTPESPTQR 65 Query: 117 VG 118 VG Sbjct: 66 VG 67 >gi|326390897|ref|ZP_08212448.1| DNA ligase, NAD-dependent [Thermoanaerobacter ethanolicus JW 200] gi|325993045|gb|EGD51486.1| DNA ligase, NAD-dependent [Thermoanaerobacter ethanolicus JW 200] Length = 662 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V+ L + +H YY LD P +D YD + L L+E++PE D P VG Sbjct: 4 KERVKELREKINYHNYRYYVLDQPEISDYEYDMLMRELIELEEKYPEFKTPDSPSQRVG 62 >gi|114319842|ref|YP_741525.1| DNA ligase, NAD-dependent [Alkalilimnicola ehrlichii MLHE-1] gi|122312282|sp|Q0AAV2|DNLJ_ALHEH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|114226236|gb|ABI56035.1| DNA ligase, NAD-dependent [Alkalilimnicola ehrlichii MLHE-1] Length = 673 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 26/58 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +E L + H YY LD P+ D YD + L AL+ + PEL D P V Sbjct: 9 QARIEALRREIREHDHRYYVLDAPVIADAEYDALMAELQALEAEHPELITPDSPSQRV 66 >gi|331015921|gb|EGH95977.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 787 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 AETRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|330963250|gb|EGH63510.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. actinidiae str. M302091] Length = 787 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 AETRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|330879146|gb|EGH13295.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 787 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 AETRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|327480472|gb|AEA83782.1| NAD-dependent DNA ligase LigA [Pseudomonas stutzeri DSM 4166] Length = 791 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L H YY LD+P D YDR+ L AL+ + PEL + P VG Sbjct: 7 AAERIAELRSEIDAHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPELVTPESPTQRVG 66 >gi|297616809|ref|YP_003701968.1| DNA ligase, NAD-dependent [Syntrophothermus lipocalidus DSM 12680] gi|297144646|gb|ADI01403.1| DNA ligase, NAD-dependent [Syntrophothermus lipocalidus DSM 12680] Length = 668 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L + H YY LD PL +D YDR+ L L++ +P+L D P VG Sbjct: 5 RERAEKLREEIRKHDYHYYVLDQPLISDAEYDRLFRELVELEQAYPDLVTPDSPTQRVG 63 >gi|166216289|sp|A4VKN0|DNLJ_PSEU5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 788 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L H YY LD+P D YDR+ L AL+ + PEL + P VG Sbjct: 7 AAERIAELRSEIDAHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPELVTPESPTQRVG 66 >gi|28870811|ref|NP_793430.1| NAD-dependent DNA ligase [Pseudomonas syringae pv. tomato str. DC3000] gi|81730313|sp|Q87YY6|DNLJ_PSESM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|28854060|gb|AAO57125.1| DNA ligase, NAD-dependent [Pseudomonas syringae pv. tomato str. DC3000] Length = 787 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 AETRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|82913524|ref|XP_728678.1| NAD-dependent DNA ligase [Plasmodium yoelii yoelii str. 17XNL] gi|23485151|gb|EAA20243.1| DNA ligase, NAD-dependent, putative [Plasmodium yoelii yoelii] Length = 354 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 33/63 (52%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 E + + L + H YYRLDDPL TD YDR+ L A++ ++PEL D P Sbjct: 184 PAEVVEKARKLREEIEFHNVRYYRLDDPLITDAEYDRLMAELLAIEARYPELVTPDSPTQ 243 Query: 116 TVG 118 VG Sbjct: 244 RVG 246 >gi|213968905|ref|ZP_03397045.1| DNA ligase, NAD-dependent [Pseudomonas syringae pv. tomato T1] gi|301385372|ref|ZP_07233790.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. tomato Max13] gi|302063632|ref|ZP_07255173.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. tomato K40] gi|302133897|ref|ZP_07259887.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926204|gb|EEB59759.1| DNA ligase, NAD-dependent [Pseudomonas syringae pv. tomato T1] Length = 787 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 AETRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|167750769|ref|ZP_02422896.1| hypothetical protein EUBSIR_01747 [Eubacterium siraeum DSM 15702] gi|167656204|gb|EDS00334.1| hypothetical protein EUBSIR_01747 [Eubacterium siraeum DSM 15702] Length = 660 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K + E E L K A H YY LDDP D YDR+ R+ ++ + PE+ E P Sbjct: 1 MDKEQIKSEYEQLCKQAEQHNFNYYVLDDPTIEDDEYDRLMRRIKEIEAENPEIVSESSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQHVG 65 >gi|90410985|ref|ZP_01218999.1| DNA ligase [Photobacterium profundum 3TCK] gi|90328198|gb|EAS44509.1| DNA ligase [Photobacterium profundum 3TCK] Length = 697 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 38/82 (46%) Query: 37 NKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSER 96 N + S L K V S + +++ L + +H YY D+P D YDR+ ++ Sbjct: 9 NGKPKRSILTKTVLVGSEMSTDIQQQLDTLREQLAYHGHRYYVEDNPEIPDAEYDRMMQQ 68 Query: 97 LDALQEQFPELFDEDHPWNTVG 118 L AL+ PEL D P VG Sbjct: 69 LLALEADHPELMSVDSPSQRVG 90 >gi|83647417|ref|YP_435852.1| DNA ligase, NAD-dependent [Hahella chejuensis KCTC 2396] gi|123767368|sp|Q2SD47|DNLJ_HAHCH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|83635460|gb|ABC31427.1| DNA ligase, NAD-dependent [Hahella chejuensis KCTC 2396] Length = 683 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 28/63 (44%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 E+ L + H YY LDDP D YDR+ RL ++ +FP+ D P Sbjct: 5 PAAIQEELNTLRETINDHNYRYYTLDDPSIPDAEYDRLMRRLREIEAEFPQTITPDSPTQ 64 Query: 116 TVG 118 VG Sbjct: 65 RVG 67 >gi|302037359|ref|YP_003797681.1| DNA ligase (NAD(+)) [Candidatus Nitrospira defluvii] gi|300605423|emb|CBK41756.1| DNA ligase (NAD(+)) [Candidatus Nitrospira defluvii] Length = 675 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L + HH YY D P +D YDR+ L L+ P+L D P VG Sbjct: 11 AEQRIADLRRQIRHHDHLYYTKDRPEISDAEYDRLFRELVDLETAHPDLVTGDSPTQRVG 70 >gi|320160951|ref|YP_004174175.1| DNA ligase [Anaerolinea thermophila UNI-1] gi|319994804|dbj|BAJ63575.1| DNA ligase [Anaerolinea thermophila UNI-1] Length = 674 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S+ E E L K +H YY LDDP+ +D YDR+ RL ++ PE D P Sbjct: 1 MSQDPLYQEYENLKKQIHYHDYRYYVLDDPVISDAEYDRLILRLKQIEFAHPEWITPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|294011619|ref|YP_003545079.1| NAD-dependent DNA ligase [Sphingobium japonicum UT26S] gi|292674949|dbj|BAI96467.1| NAD-dependent DNA ligase [Sphingobium japonicum UT26S] Length = 711 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 33/70 (47%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 +TS+++ EA + L + H + Y+ D P TD YD + +AL+ FP L Sbjct: 2 TDLTSMTEAEAANHLMRLAREIARHNRLYHDQDQPEITDAAYDALIRENNALEAAFPHLV 61 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 62 RSDSPNAQVG 71 >gi|291530728|emb|CBK96313.1| DNA ligase, NAD-dependent [Eubacterium siraeum 70/3] Length = 660 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K + E E L K A H YY LDDP D YDR+ R+ ++ + PE+ E P Sbjct: 1 MDKEQIKSEYEQLCKQAEQHNFNYYVLDDPTIEDDEYDRLMRRIKEIEAENPEIVSESSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQHVG 65 >gi|89900985|ref|YP_523456.1| DNA ligase [Rhodoferax ferrireducens T118] gi|123397178|sp|Q21WC8|DNLJ_RHOFD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|89345722|gb|ABD69925.1| DNA ligase, NAD-dependent [Rhodoferax ferrireducens T118] Length = 690 Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 26/56 (46%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V L + H YY D P D YDR+ + L A++ Q PEL D P VG Sbjct: 19 VAQLRRALHEHAHHYYVEDAPTIPDAEYDRMFQELQAIEAQHPELITPDSPTQRVG 74 >gi|225620892|ref|YP_002722150.1| NAD-dependent DNA ligase LigA [Brachyspira hyodysenteriae WA1] gi|254781267|sp|C0QVE5|DNLJ_BRAHW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|225215712|gb|ACN84446.1| NAD-dependent DNA ligase LigA [Brachyspira hyodysenteriae WA1] Length = 663 Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 36/65 (55%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ EA +E L + +H K YY D+P D YD++ L+ L+ +FPEL +D P Sbjct: 1 MNIEEAKQRIEQLTETINYHNKLYYTDDNPEIEDYEYDKLFRELENLEREFPELKKDDSP 60 Query: 114 WNTVG 118 N VG Sbjct: 61 TNKVG 65 >gi|111225216|ref|YP_716010.1| DNA ligase [Frankia alni ACN14a] gi|122953782|sp|Q0RDH8|DNLJ_FRAAA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|111152748|emb|CAJ64491.1| DNA ligase [Frankia alni ACN14a] Length = 771 Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 25/58 (43%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 L + H YY LD P +D YDR+ L AL+E PEL D P V Sbjct: 60 RARAAELARELDEHAYRYYVLDSPTVSDAEYDRLMRELTALEEHHPELRTPDSPTQKV 117 >gi|262373317|ref|ZP_06066596.1| DNA ligase, NAD-dependent [Acinetobacter junii SH205] gi|262313342|gb|EEY94427.1| DNA ligase, NAD-dependent [Acinetobacter junii SH205] Length = 677 Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + + ++ L+++ H YY +D P TD YD + +L AL++Q+PE D P Sbjct: 1 MEQNSVIEQMRQLIQLIAKHNHAYYVMDQPTITDSEYDHLFHQLKALEQQYPEFMQADTP 60 Query: 114 WNTVG 118 N VG Sbjct: 61 TNKVG 65 >gi|146282220|ref|YP_001172373.1| NAD-dependent DNA ligase LigA [Pseudomonas stutzeri A1501] gi|145570425|gb|ABP79531.1| DNA ligase, NAD-dependent [Pseudomonas stutzeri A1501] Length = 802 Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L H YY LD+P D YDR+ L AL+ + PEL + P VG Sbjct: 21 AAERIAELRSEIDAHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPELVTPESPTQRVG 80 >gi|89094416|ref|ZP_01167356.1| DNA ligase [Oceanospirillum sp. MED92] gi|89081308|gb|EAR60540.1| DNA ligase [Oceanospirillum sp. MED92] Length = 674 Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 27/56 (48%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH YY LDDP D YDR+ L L+ PEL ED P VG Sbjct: 7 LQQLRDQLNHHNYQYYVLDDPEVPDAEYDRLFRELKKLESDNPELITEDSPTQRVG 62 >gi|84516174|ref|ZP_01003534.1| DNA ligase [Loktanella vestfoldensis SKA53] gi|84509870|gb|EAQ06327.1| DNA ligase [Loktanella vestfoldensis SKA53] Length = 722 Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L++ EAM+E+ L + Y+R D P +D YD + +R A++ +F EL Sbjct: 24 VADLTRAEAMVELARLAQTLAQANTAYHRNDTPEISDAAYDALKQRNAAIEARFRELKRA 83 Query: 111 DHPWNTVG 118 D P + VG Sbjct: 84 DSPSDQVG 91 >gi|269138493|ref|YP_003295193.1| NAD-dependent DNA ligase [Edwardsiella tarda EIB202] gi|267984153|gb|ACY83982.1| NAD-dependent DNA ligase [Edwardsiella tarda EIB202] gi|304558517|gb|ADM41181.1| DNA ligase [Edwardsiella tarda FL6-60] Length = 675 Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L HH+ YY LD+P TD YDR+ +L L+ + P L D P VG Sbjct: 5 IEQQLEQLRDALRHHEYQYYVLDEPQVTDAEYDRLMAQLKQLEAEHPALVTADSPSQRVG 64 >gi|323228068|gb|EGA12205.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] Length = 276 Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|294631529|ref|ZP_06710089.1| DNA ligase, NAD-dependent [Streptomyces sp. e14] gi|292834862|gb|EFF93211.1| DNA ligase, NAD-dependent [Streptomyces sp. e14] Length = 732 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 32/62 (51%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 EA E L + H+ YY D P+ +D +DR+ L+AL+E++PEL D P Sbjct: 2 PAEAREEHARLAEQVEEHRFRYYVKDAPVISDADFDRLLRSLEALEERYPELRTPDSPTQ 61 Query: 116 TV 117 V Sbjct: 62 KV 63 >gi|307293327|ref|ZP_07573173.1| DNA ligase, NAD-dependent [Sphingobium chlorophenolicum L-1] gi|306881393|gb|EFN12609.1| DNA ligase, NAD-dependent [Sphingobium chlorophenolicum L-1] Length = 711 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 31/70 (44%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 T +++ EA + L + H + Y+ D P TD YD + +AL+ FP L Sbjct: 2 TDPTPMTEAEAANRLMRLAREIARHNRLYHDQDQPEITDAAYDALIRENNALEAAFPHLI 61 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 62 RSDSPNAQVG 71 >gi|121611375|ref|YP_999182.1| DNA ligase [Verminephrobacter eiseniae EF01-2] gi|166216275|sp|A1WRA7|DNLJ_VEREI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|121556015|gb|ABM60164.1| DNA ligase, NAD-dependent [Verminephrobacter eiseniae EF01-2] Length = 693 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 29/73 (39%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 LD + +A + L + +H Y+ LD P D YDR + L AL+ Sbjct: 5 LDHCPDPAQMDPAQADARIRALREQLVHWAHQYHVLDAPSVPDAEYDRAFQALQALEAAH 64 Query: 105 PELFDEDHPWNTV 117 P L D P V Sbjct: 65 PALITPDSPTRRV 77 >gi|307297347|ref|ZP_07577153.1| DNA ligase, NAD-dependent [Thermotogales bacterium mesG1.Ag.4.2] gi|306916607|gb|EFN46989.1| DNA ligase, NAD-dependent [Thermotogales bacterium mesG1.Ag.4.2] Length = 665 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ EA ++ L K +H YY LDDP D YD + L L+EQ+PEL D P Sbjct: 2 ITFEEARKRIDELRKEIDYHAYRYYVLDDPEIPDSEYDNLLRTLIDLEEQYPELKTPDSP 61 Query: 114 WNTVG 118 VG Sbjct: 62 SIRVG 66 >gi|260426307|ref|ZP_05780286.1| DNA ligase, NAD-dependent [Citreicella sp. SE45] gi|260420799|gb|EEX14050.1| DNA ligase, NAD-dependent [Citreicella sp. SE45] Length = 754 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 37/68 (54%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L++ +A E+ L ++ + Y+ D P +D YD + R A++E+FPEL E Sbjct: 11 VEALTETQARDELARLAEVLAQANRAYHTEDAPEISDADYDALKLRNIAIEERFPELKRE 70 Query: 111 DHPWNTVG 118 D P VG Sbjct: 71 DSPSEQVG 78 >gi|226953496|ref|ZP_03823960.1| DNA ligase [Acinetobacter sp. ATCC 27244] gi|226835781|gb|EEH68164.1| DNA ligase [Acinetobacter sp. ATCC 27244] Length = 675 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + ++ L+++ H YY +D P +D YD + +L AL++Q+PE D P Sbjct: 1 MEHNSVIEQMRQLIQLIAKHNHAYYVMDQPSISDSEYDHLFHQLKALEQQYPECIQADTP 60 Query: 114 WNTVG 118 N VG Sbjct: 61 TNKVG 65 >gi|294649516|ref|ZP_06726937.1| NAD-dependent DNA ligase LigA [Acinetobacter haemolyticus ATCC 19194] gi|292824577|gb|EFF83359.1| NAD-dependent DNA ligase LigA [Acinetobacter haemolyticus ATCC 19194] Length = 675 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + ++ L+++ H YY +D P +D YD + +L AL++Q+PE D P Sbjct: 1 MEHNSVIEQMRQLIQLIAKHNHAYYVMDQPSISDSEYDHLFHQLKALEQQYPECIQADTP 60 Query: 114 WNTVG 118 N VG Sbjct: 61 TNKVG 65 >gi|313679715|ref|YP_004057454.1| DNA ligase, nad-dependent [Oceanithermus profundus DSM 14977] gi|313152430|gb|ADR36281.1| DNA ligase, NAD-dependent [Oceanithermus profundus DSM 14977] Length = 670 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ EA V L H YY LD P +D YD + L L+ FPEL P Sbjct: 1 MTREEAARRVAELTWAIRRHNHLYYVLDRPEISDAEYDALVRELAELEAAFPELRSPASP 60 Query: 114 WNTVG 118 N VG Sbjct: 61 TNQVG 65 >gi|220931078|ref|YP_002507986.1| DNA ligase, NAD-dependent [Halothermothrix orenii H 168] gi|254781343|sp|B8D122|DNLJ_HALOH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219992388|gb|ACL68991.1| DNA ligase, NAD-dependent [Halothermothrix orenii H 168] Length = 670 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 32/62 (51%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ L + +H+ YY LDDP +D +D + +RL L+E+ P L D P Sbjct: 3 SKVEQEIRDLREKIRYHEYRYYVLDDPEISDAEFDELIQRLIDLEEKHPGLVTPDSPTQR 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|317049042|ref|YP_004116690.1| DNA ligase, NAD-dependent [Pantoea sp. At-9b] gi|316950659|gb|ADU70134.1| DNA ligase, NAD-dependent [Pantoea sp. At-9b] Length = 672 Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ +L L+ PEL D P VG Sbjct: 4 VQEQITALRTTLRHHEYLYHVMDTPEVPDAEYDRLMAQLRELESAHPELVTPDSPTQRVG 63 >gi|313201136|ref|YP_004039794.1| DNA ligase, nad-dependent [Methylovorus sp. MP688] gi|312440452|gb|ADQ84558.1| DNA ligase, NAD-dependent [Methylovorus sp. MP688] Length = 689 Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 31/67 (46%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 +++ +++ L + + YY LDDP D YD++ L AL+ PEL D Sbjct: 7 ATVTSATPEVQIRQLREQINLYNYQYYVLDDPSVPDSEYDKLFRELQALEHAHPELLTPD 66 Query: 112 HPWNTVG 118 P VG Sbjct: 67 SPTQRVG 73 >gi|329889238|ref|ZP_08267581.1| DNA ligase, NAD-dependent [Brevundimonas diminuta ATCC 11568] gi|328844539|gb|EGF94103.1| DNA ligase, NAD-dependent [Brevundimonas diminuta ATCC 11568] Length = 774 Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 31/73 (42%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D V +L++ +A E++ L H YY P +D YD + R AL+ FP Sbjct: 3 DLFTPVETLTEAQAREELDRLSAELARHDALYYADAAPEISDADYDELKRRALALEAAFP 62 Query: 106 ELFDEDHPWNTVG 118 L P VG Sbjct: 63 ALSGPISPSQRVG 75 >gi|162148970|ref|YP_001603431.1| putative DNA ligase [Gluconacetobacter diazotrophicus PAl 5] gi|190359260|sp|A9H0L6|DNLJ_GLUDA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|161787547|emb|CAP57143.1| putative DNA ligase [Gluconacetobacter diazotrophicus PAl 5] Length = 695 Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 36/68 (52%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 + L++ +AM+E+E L + + YY D P TD YD + +R A++ +FP+L Sbjct: 2 DPSELTEPQAMVELERLAQQIRALDRAYYEDDAPTVTDAEYDALRQRNLAIEARFPDLRR 61 Query: 110 EDHPWNTV 117 D P V Sbjct: 62 ADSPSLHV 69 >gi|320540519|ref|ZP_08040169.1| DNA ligase, NAD(+)-dependent [Serratia symbiotica str. Tucson] gi|320029450|gb|EFW11479.1| DNA ligase, NAD(+)-dependent [Serratia symbiotica str. Tucson] Length = 685 Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 26/58 (44%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ LD P D YDR+ L L+ PEL D P VG Sbjct: 6 EQINQLRASLRHHEYQYHVLDAPEVPDAEYDRLMCELRELESAHPELITADSPTQRVG 63 >gi|225873424|ref|YP_002754883.1| DNA ligase, NAD-dependent [Acidobacterium capsulatum ATCC 51196] gi|254781243|sp|C1F7S7|DNLJ_ACIC5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|225792636|gb|ACO32726.1| DNA ligase, NAD-dependent [Acidobacterium capsulatum ATCC 51196] Length = 677 Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S A ++E L + HH+ YY D P D +D + +L L+ + PEL D P Sbjct: 1 MSHASAAQQIESLRESIRHHEYLYYVQDQPEIDDLAFDELMRKLQRLEAEHPELITPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|108759370|ref|YP_633776.1| NAD-dependent DNA ligase [Myxococcus xanthus DK 1622] gi|123074067|sp|Q1D0P7|DNLJ_MYXXD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|108463250|gb|ABF88435.1| DNA ligase, NAD-dependent [Myxococcus xanthus DK 1622] Length = 672 Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 27/64 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 +A L + HH YY LD P +D YD++ L L+ + P L D P Sbjct: 3 DFQKAAARARELHRELAHHNYRYYVLDSPEVSDAQYDKLMRELQDLEAKHPSLQTPDSPT 62 Query: 115 NTVG 118 VG Sbjct: 63 QRVG 66 >gi|157961514|ref|YP_001501548.1| DNA ligase, NAD-dependent [Shewanella pealeana ATCC 700345] gi|190359287|sp|A8H376|DNLJ_SHEPA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157846514|gb|ABV87013.1| DNA ligase, NAD-dependent [Shewanella pealeana ATCC 700345] Length = 668 Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L H YY D P D YDR+ RL AL+ + PE D P VG Sbjct: 4 IQNEIAQLTAELNQHNYRYYVDDSPSIPDAEYDRLLNRLKALETEHPEFCRPDSPTQRVG 63 >gi|258592875|emb|CBE69184.1| DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) [NC10 bacterium 'Dutch sediment'] Length = 684 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +V+ L ++ H+ YY LD P TD +D + +RL L+ Q PEL D P VG Sbjct: 8 RAQVDDLRQLIRRHEYLYYVLDRPEITDAEFDTLYQRLQTLETQHPELITPDSPTQRVG 66 >gi|209545276|ref|YP_002277505.1| NAD-dependent DNA ligase [Gluconacetobacter diazotrophicus PAl 5] gi|209532953|gb|ACI52890.1| DNA ligase, NAD-dependent [Gluconacetobacter diazotrophicus PAl 5] Length = 708 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 36/68 (52%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 + L++ +AM+E+E L + + YY D P TD YD + +R A++ +FP+L Sbjct: 15 DPSELTEPQAMVELERLAQQIRALDRAYYEDDAPTVTDAEYDALRQRNLAIEARFPDLRR 74 Query: 110 EDHPWNTV 117 D P V Sbjct: 75 ADSPSLHV 82 >gi|163868703|ref|YP_001609915.1| NAD-dependent DNA ligase LigA [Bartonella tribocorum CIP 105476] gi|190359235|sp|A9IW95|DNLJ_BART1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|161018362|emb|CAK01920.1| DNA ligase [Bartonella tribocorum CIP 105476] Length = 719 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 34/68 (50%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + +L+ EA E+E+L K H Y R D P +D YD + R ++ FPEL Sbjct: 6 IKNLTVVEAERELEWLAKEIARHDVLYNRDDQPEISDAEYDALRRRNAEIEALFPELIRV 65 Query: 111 DHPWNTVG 118 D P + +G Sbjct: 66 DSPSHKIG 73 >gi|83942325|ref|ZP_00954786.1| DNA ligase, NAD-dependent [Sulfitobacter sp. EE-36] gi|83846418|gb|EAP84294.1| DNA ligase, NAD-dependent [Sulfitobacter sp. EE-36] Length = 706 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 35/74 (47%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + + LS+ EA E+ L + Y+ D P +D YDR+ R A++E+F Sbjct: 1 MTDKTALQELSEEEAKAELARLADLLGRANTAYHTQDAPDLSDAEYDRLKRRNQAIEERF 60 Query: 105 PELFDEDHPWNTVG 118 P L D P + VG Sbjct: 61 PGLKRADSPSDKVG 74 >gi|149915267|ref|ZP_01903795.1| DNA ligase, NAD-dependent [Roseobacter sp. AzwK-3b] gi|149810988|gb|EDM70827.1| DNA ligase, NAD-dependent [Roseobacter sp. AzwK-3b] Length = 720 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 36/71 (50%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 + V LS +A E+ L + Y+ D P+ +D YD + +R A++ +FP+L Sbjct: 16 RPVDKLSADQAAQELARLADLVAQADAAYHGQDAPIMSDAAYDALVQRNAAIEARFPDLM 75 Query: 109 DEDHPWNTVGY 119 ED P VG+ Sbjct: 76 REDSPSRRVGF 86 >gi|54308062|ref|YP_129082.1| NAD-dependent DNA ligase LigA [Photobacterium profundum SS9] gi|81615410|sp|Q6LTU5|DNLJ_PHOPR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|46912488|emb|CAG19280.1| putative NAD-dependent DNA ligase [Photobacterium profundum SS9] Length = 676 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 32/61 (52%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + +++ L + +H YY D+P D YDR+ ++L AL+ + PEL D P V Sbjct: 9 DIQQQLDTLREQLAYHGHRYYVEDNPEIPDAEYDRMMQQLLALEAEHPELMSVDSPSQRV 68 Query: 118 G 118 G Sbjct: 69 G 69 >gi|183599716|ref|ZP_02961209.1| hypothetical protein PROSTU_03219 [Providencia stuartii ATCC 25827] gi|188021975|gb|EDU60015.1| hypothetical protein PROSTU_03219 [Providencia stuartii ATCC 25827] Length = 671 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + HH+ Y+ LD P D YD++ E L A++ + PE D P VG Sbjct: 4 KQHLDTLKQQLRHHEYQYHVLDAPEIPDAEYDKLMEELKAIEAEHPEWITSDSPTQRVG 62 >gi|83953544|ref|ZP_00962265.1| DNA ligase, NAD-dependent [Sulfitobacter sp. NAS-14.1] gi|83841489|gb|EAP80658.1| DNA ligase, NAD-dependent [Sulfitobacter sp. NAS-14.1] Length = 706 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 35/74 (47%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + + LS+ EA E+ L + Y+ D P +D YDR+ R A++E+F Sbjct: 1 MTDKTALQELSEEEAKAELARLADLLGRANAAYHTQDAPDLSDAEYDRLKRRNQAIEERF 60 Query: 105 PELFDEDHPWNTVG 118 P L D P + VG Sbjct: 61 PRLKRADSPSDKVG 74 >gi|299771367|ref|YP_003733393.1| DNA ligase, NAD-dependent [Acinetobacter sp. DR1] gi|298701455|gb|ADI92020.1| DNA ligase, NAD-dependent [Acinetobacter sp. DR1] Length = 679 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 34/65 (52%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + ++ L+++ H YY +D P +D YD + +L AL+EQ+P+ D P Sbjct: 1 MATTSVIEQMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPDQVQSDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TTKVG 65 >gi|238919178|ref|YP_002932692.1| NAD-dependent DNA ligase LigA [Edwardsiella ictaluri 93-146] gi|238868746|gb|ACR68457.1| DNA ligase, NAD-dependent, putative [Edwardsiella ictaluri 93-146] Length = 672 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 29/60 (48%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L HH+ YY LDDP TD YDR+ +L L+ P L D P VG Sbjct: 2 IEQQLEQLRDALRHHEYQYYVLDDPQITDAEYDRLMMQLKQLEAVHPALVTVDSPSQRVG 61 >gi|308377195|ref|ZP_07441467.2| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu008] gi|13882885|gb|AAK47423.1| DNA ligase [Mycobacterium tuberculosis CDC1551] gi|308348655|gb|EFP37506.1| NAD-dependent DNA ligase ligA [Mycobacterium tuberculosis SUMu008] Length = 679 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 31/58 (53%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + + L + HQ YY D P+ +D +D + RL+AL+EQ PEL D P VG Sbjct: 3 RQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVG 60 >gi|325982988|ref|YP_004295390.1| DNA ligase, NAD-dependent [Nitrosomonas sp. AL212] gi|325532507|gb|ADZ27228.1| DNA ligase, NAD-dependent [Nitrosomonas sp. AL212] Length = 677 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L H YY LD P D YDR+ L +++ +P+L D P Sbjct: 6 EKIRHRIQDLRAEIELHNYRYYVLDTPTIPDAEYDRLLRELQHIEQDYPQLITADSPTQR 65 Query: 117 VG 118 VG Sbjct: 66 VG 67 >gi|212638096|ref|YP_002314616.1| NAD-dependent DNA ligase LigA [Anoxybacillus flavithermus WK1] gi|254781544|sp|B7GFV1|DNLJ_ANOFW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|212559576|gb|ACJ32631.1| NAD-dependent DNA ligase [Anoxybacillus flavithermus WK1] Length = 672 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++ L + H YY LD P +D YD + +L L+EQ+P+ D P V Sbjct: 8 DVEKQIAELREQIEKHNYAYYVLDQPSISDAEYDELMRKLMELEEQYPQYKTPDSPSQRV 67 Query: 118 G 118 G Sbjct: 68 G 68 >gi|85859410|ref|YP_461612.1| NAD-dependent DNA ligase [Syntrophus aciditrophicus SB] gi|123738818|sp|Q2LTN8|DNLJ_SYNAS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|85722501|gb|ABC77444.1| NAD-dependent DNA ligase [Syntrophus aciditrophicus SB] Length = 672 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + A +E L +H + YY+LDDP +D YD + + L AL++QFP+ ED P Sbjct: 2 MDAESARKNIEDLKARIEYHNRRYYQLDDPEISDAEYDSLLQELIALEKQFPQWLTEDSP 61 Query: 114 WNTVG 118 +G Sbjct: 62 SRRIG 66 >gi|71042246|pdb|1ZAU|A Chain A, Adenylation Domain Of Nad+ Dependent Dna Ligase From M.Tuberculosis Length = 328 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 35/71 (49%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + + E + + + L + HQ YY D P+ +D +D + RL+AL+EQ PEL Sbjct: 2 SSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPEL 61 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 62 RTPDSPTQLVG 72 >gi|262379150|ref|ZP_06072306.1| DNA ligase, NAD-dependent [Acinetobacter radioresistens SH164] gi|262298607|gb|EEY86520.1| DNA ligase, NAD-dependent [Acinetobacter radioresistens SH164] Length = 682 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 34/64 (53%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S + ++ L+++ H YY +D P +D YD + +L AL+EQ+P+L D P Sbjct: 7 STAGIVTQMRQLIQLIAQHNHAYYVMDQPSISDNEYDSLFHQLKALEEQYPDLVQNDTPT 66 Query: 115 NTVG 118 VG Sbjct: 67 RRVG 70 >gi|292491548|ref|YP_003526987.1| DNA ligase, NAD-dependent [Nitrosococcus halophilus Nc4] gi|291580143|gb|ADE14600.1| DNA ligase, NAD-dependent [Nitrosococcus halophilus Nc4] Length = 675 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 31/62 (50%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 +A VE L K+ + YY LD P+ D YDR+ L L+ Q+PEL D P Sbjct: 5 AQARERVETLRKLINDYNYNYYVLDSPVVPDSEYDRLMRELQNLEAQYPELVVPDSPTQR 64 Query: 117 VG 118 VG Sbjct: 65 VG 66 >gi|239825842|ref|YP_002948466.1| NAD-dependent DNA ligase LigA [Geobacillus sp. WCH70] gi|239806135|gb|ACS23200.1| DNA ligase, NAD-dependent [Geobacillus sp. WCH70] Length = 670 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 36/65 (55%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + AM +E L ++ + YY LD P D YDR+ + L AL+EQ+P+L +D P Sbjct: 1 MDRQAAMKRIEELRELLNKYNYEYYVLDRPSVPDAEYDRLMQELIALEEQYPDLKTKDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|240850882|ref|YP_002972282.1| DNA ligase [Bartonella grahamii as4aup] gi|240268005|gb|ACS51593.1| DNA ligase [Bartonella grahamii as4aup] Length = 719 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 33/67 (49%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 +L+ EA E+E+L K H Y R D P +D YD + R ++ FPEL D Sbjct: 7 KNLTAVEAESELEWLAKEIARHDVLYNRDDQPEISDAEYDALRRRNAEIEALFPELIRVD 66 Query: 112 HPWNTVG 118 P + +G Sbjct: 67 SPSHKIG 73 >gi|262402686|ref|ZP_06079247.1| DNA ligase [Vibrio sp. RC586] gi|262351468|gb|EEZ00601.1| DNA ligase [Vibrio sp. RC586] Length = 669 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 24/60 (40%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + H YY D P D YDR+ L ++ Q PEL D P VG Sbjct: 4 VEQRLTELRQTLHEHGVRYYVEDAPTIPDAEYDRLMRELLEIEAQHPELITPDSPSLRVG 63 >gi|255318624|ref|ZP_05359855.1| DNA ligase, NAD-dependent [Acinetobacter radioresistens SK82] gi|255304306|gb|EET83492.1| DNA ligase, NAD-dependent [Acinetobacter radioresistens SK82] Length = 678 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 34/64 (53%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S + ++ L+++ H YY +D P +D YD + +L AL+EQ+P+L D P Sbjct: 3 STAGIVTQMRQLIQLIAQHNHAYYVMDQPSISDNEYDSLFHQLKALEEQYPDLVQNDTPT 62 Query: 115 NTVG 118 VG Sbjct: 63 RRVG 66 >gi|300870442|ref|YP_003785313.1| NAD-dependent DNA ligase [Brachyspira pilosicoli 95/1000] gi|300688141|gb|ADK30812.1| NAD-dependent DNA ligase [Brachyspira pilosicoli 95/1000] Length = 663 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 36/65 (55%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ EA ++E L +H K YY D+P D YD++ L+ L+ +FPEL +D P Sbjct: 1 MNLEEARKKIEQLTATINYHNKLYYTDDNPEIEDYEYDKLFRELENLEREFPELKKDDSP 60 Query: 114 WNTVG 118 N VG Sbjct: 61 TNKVG 65 >gi|294102358|ref|YP_003554216.1| DNA ligase, NAD-dependent [Aminobacterium colombiense DSM 12261] gi|293617338|gb|ADE57492.1| DNA ligase, NAD-dependent [Aminobacterium colombiense DSM 12261] Length = 684 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + EA+ +E L + H YY LD P D YD + L +L+E FPE D D P Sbjct: 1 MDRREALQRIEALREEINRHAHLYYVLDTPEIADHEYDALFRELASLEEAFPEFDDPDSP 60 Query: 114 WNTVG 118 + VG Sbjct: 61 THRVG 65 >gi|300724062|ref|YP_003713378.1| DNA ligase [Xenorhabdus nematophila ATCC 19061] gi|297630595|emb|CBJ91260.1| DNA ligase [Xenorhabdus nematophila ATCC 19061] Length = 658 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 25/49 (51%) Query: 70 ALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ +D P D YDR+ L AL+EQ PE D P +G Sbjct: 1 MRHHEYLYHVMDAPEIPDAEYDRLMRELKALEEQHPEWVTADSPTQRIG 49 >gi|254785950|ref|YP_003073379.1| DNA ligase, NAD-dependent [Teredinibacter turnerae T7901] gi|237685872|gb|ACR13136.1| DNA ligase, NAD-dependent [Teredinibacter turnerae T7901] Length = 676 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 32/67 (47%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + + M L ++ HH + YY LD+P D YDR+ L L+ +FP+L D Sbjct: 4 SQVPSEAVMRRCNELHQLLNHHNRQYYLLDEPEIPDAEYDRLFHELKTLEAEFPQLETAD 63 Query: 112 HPWNTVG 118 P VG Sbjct: 64 SPTQRVG 70 >gi|269836970|ref|YP_003319198.1| DNA ligase, NAD-dependent [Sphaerobacter thermophilus DSM 20745] gi|269786233|gb|ACZ38376.1| DNA ligase, NAD-dependent [Sphaerobacter thermophilus DSM 20745] Length = 680 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 27/65 (41%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + + L K+ + YY LD P +D YD + L L+ PEL D P Sbjct: 1 MDDVDVQERIAELRKLIERYNYEYYVLDQPSVSDAEYDALMNELRELEAAHPELITPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|239815926|ref|YP_002944836.1| DNA ligase, NAD-dependent [Variovorax paradoxus S110] gi|239802503|gb|ACS19570.1| DNA ligase, NAD-dependent [Variovorax paradoxus S110] Length = 694 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 28/53 (52%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + H YY LD P D YDR+ +RL AL+ ++PEL D P VG Sbjct: 14 LSEQLHKHAHLYYVLDAPELPDAEYDRLFQRLQALEAEYPELRTPDSPTQRVG 66 >gi|301155433|emb|CBW14899.1| DNA ligase, NAD(+)-dependent [Haemophilus parainfluenzae T3T1] Length = 667 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L + ++ Y+ LD+P D YDR+ +L AL+ PEL D P VG Sbjct: 4 QQQIDTLRQDLRRYEYEYHVLDNPTIPDAEYDRLFHQLKALEAAHPELITADSPTQRVG 62 >gi|121604718|ref|YP_982047.1| DNA ligase [Polaromonas naphthalenivorans CJ2] gi|166216226|sp|A1VN98|DNLJ_POLNA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|120593687|gb|ABM37126.1| DNA ligase, NAD-dependent [Polaromonas naphthalenivorans CJ2] Length = 707 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 29/71 (40%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + + + + L H YY LD+P D YDR+ + L AL+ PEL Sbjct: 9 SPTPAPMPPASVIERIAALRAELDLHAHRYYVLDEPSIPDAEYDRLFKELQALEAAHPEL 68 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 69 LTPDSPTQRVG 79 >gi|299139723|ref|ZP_07032896.1| DNA ligase, NAD-dependent [Acidobacterium sp. MP5ACTX8] gi|298598347|gb|EFI54512.1| DNA ligase, NAD-dependent [Acidobacterium sp. MP5ACTX8] Length = 723 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 +LS + ++E L + HH+ YY LD P TD YD L L+ + PEL Sbjct: 4 TPSNALSPDQ---QIEALREDLRHHEHLYYVLDAPELTDAQYDARMNELRRLETEHPELV 60 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 61 TPDSPTQRVG 70 >gi|330466191|ref|YP_004403934.1| DNA ligase [Verrucosispora maris AB-18-032] gi|328809162|gb|AEB43334.1| DNA ligase, NAD-dependent [Verrucosispora maris AB-18-032] Length = 717 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A L + HQ YY LD P +D +DR L AL+E+FP L D P V Sbjct: 31 QARERHATLSQELTEHQYRYYVLDAPTVSDAEFDRQLRELTALEEEFPALRTPDSPTQRV 90 Query: 118 G 118 G Sbjct: 91 G 91 >gi|323495433|ref|ZP_08100510.1| NAD-dependent DNA ligase LigA [Vibrio brasiliensis LMG 20546] gi|323310356|gb|EGA63543.1| NAD-dependent DNA ligase LigA [Vibrio brasiliensis LMG 20546] Length = 669 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L + +H YY D P D YDR+ L ++ Q PEL D P Sbjct: 3 QQIQEKLNQLRESLHYHGVKYYVEDSPEIPDAEYDRLMRELMEIEAQHPELVSLDSPSQR 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|118617527|ref|YP_905859.1| NAD-dependent DNA ligase LigA [Mycobacterium ulcerans Agy99] gi|166216215|sp|A0PPW9|DNLJ_MYCUA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|118569637|gb|ABL04388.1| DNA ligase [NAD dependent] LigA [Mycobacterium ulcerans Agy99] Length = 683 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 32/58 (55%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + + L + HQ YY D P+ TD +D + RL+AL+EQ+PEL D P VG Sbjct: 3 RQWQELAEQVREHQFRYYVRDAPVITDAEFDELLRRLEALEEQYPELRTPDSPTQLVG 60 >gi|261854791|ref|YP_003262074.1| DNA ligase, NAD-dependent [Halothiobacillus neapolitanus c2] gi|261835260|gb|ACX95027.1| DNA ligase, NAD-dependent [Halothiobacillus neapolitanus c2] Length = 685 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 24/59 (40%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L H YY LDDP +D +DR+ L ++ PE D P VG Sbjct: 18 RARLLALRDEIERHNFRYYVLDDPEISDAAFDRLMRELQQIESAHPEWITPDSPTQRVG 76 >gi|312870519|ref|ZP_07730638.1| DNA ligase (NAD+) [Lactobacillus oris PB013-T2-3] gi|311093981|gb|EFQ52306.1| DNA ligase (NAD+) [Lactobacillus oris PB013-T2-3] Length = 679 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 38/74 (51%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 +DK V L+ A E+ L + + + YY D+P D +YDR +RL L+++F Sbjct: 1 MDKPTPVDQLTLAAAKQEIAPLREQLIKWGQEYYEQDNPSVEDYVYDRAYQRLVELEQRF 60 Query: 105 PELFDEDHPWNTVG 118 PEL D P VG Sbjct: 61 PELKTSDSPTQHVG 74 >gi|260912664|ref|ZP_05919150.1| DNA ligase [Pasteurella dagmatis ATCC 43325] gi|260633042|gb|EEX51207.1| DNA ligase [Pasteurella dagmatis ATCC 43325] Length = 673 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 31/57 (54%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+E L K ++ Y+ LD+P D YDR+ +L L+ ++P+ ED P VG Sbjct: 8 EMEQLRKTLRRYEYQYHVLDNPTVPDAEYDRLFHQLKKLEREYPQFITEDSPTQRVG 64 >gi|283832193|ref|ZP_06351934.1| DNA ligase, NAD-dependent [Citrobacter youngae ATCC 29220] gi|291071830|gb|EFE09939.1| DNA ligase, NAD-dependent [Citrobacter youngae ATCC 29220] Length = 671 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YD + +L L+ PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDVEYDLLMHKLQWLEALHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|193212122|ref|YP_001998075.1| DNA ligase, NAD-dependent [Chlorobaculum parvum NCIB 8327] gi|254781284|sp|B3QLI5|DNLJ_CHLP8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|193085599|gb|ACF10875.1| DNA ligase, NAD-dependent [Chlorobaculum parvum NCIB 8327] Length = 674 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K +A E+ L H + YY P +D +D++ ERL AL+ +FPEL D P Sbjct: 1 MDKAKAQQEIGKLRAEIERHNRLYYLEAKPEISDFEFDKLLERLIALETEFPELVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|120403104|ref|YP_952933.1| NAD-dependent DNA ligase LigA [Mycobacterium vanbaalenii PYR-1] gi|166216216|sp|A1T6X7|DNLJ_MYCVP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|119955922|gb|ABM12927.1| DNA ligase, NAD-dependent [Mycobacterium vanbaalenii PYR-1] Length = 707 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 31/67 (46%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ + + L HQ YY D P+ TD +D + RL+AL+E PEL D Sbjct: 18 DDATEAGLRRQWQELADEVRDHQFRYYVRDAPIITDAEFDAMLRRLEALEEAHPELRTPD 77 Query: 112 HPWNTVG 118 P VG Sbjct: 78 SPTQLVG 84 >gi|91788454|ref|YP_549406.1| DNA ligase [Polaromonas sp. JS666] gi|123164833|sp|Q12AD4|DNLJ_POLSJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|91697679|gb|ABE44508.1| DNA ligase, NAD-dependent [Polaromonas sp. JS666] Length = 706 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 29/71 (40%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 A+ S + L H YY LD+P D YDR+ + L L+ +PEL Sbjct: 8 AQPEPSRQPASPAERMAALRAELHAHAHRYYVLDEPTIPDSEYDRLFKELQDLEAAYPEL 67 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 68 LTPDSPTQRVG 78 >gi|260769097|ref|ZP_05878031.1| DNA ligase [Vibrio furnissii CIP 102972] gi|260617127|gb|EEX42312.1| DNA ligase [Vibrio furnissii CIP 102972] Length = 669 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L +H YY DDP D YDR+ L L+ Q PEL D P VG Sbjct: 4 VEQRLTELKDTLHYHAIRYYVEDDPTIPDAEYDRLMRELLDLEAQHPELVTPDSPSQRVG 63 >gi|254510866|ref|ZP_05122933.1| DNA ligase, NAD-dependent [Rhodobacteraceae bacterium KLH11] gi|221534577|gb|EEE37565.1| DNA ligase, NAD-dependent [Rhodobacteraceae bacterium KLH11] Length = 750 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 35/74 (47%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + K V L++ +A E+ L L + Y+ D P +DG YD + R ++ +F Sbjct: 1 MSKTTAVADLTEEDAQQELARLAAELLRANQLYHAEDAPELSDGDYDALKRRNAEIEARF 60 Query: 105 PELFDEDHPWNTVG 118 P+L D P VG Sbjct: 61 PDLKRTDSPSEQVG 74 >gi|158312936|ref|YP_001505444.1| DNA ligase, NAD-dependent [Frankia sp. EAN1pec] gi|254781334|sp|A8L538|DNLJ_FRASN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|158108341|gb|ABW10538.1| DNA ligase, NAD-dependent [Frankia sp. EAN1pec] Length = 703 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 25/56 (44%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 L + H YY LD P D YD + L+A++E+ PEL D P V Sbjct: 29 RAAELARELEEHAYRYYVLDKPTVADAEYDALMRELEAIEERHPELRTPDSPTQKV 84 >gi|16077730|ref|NP_388544.1| NAD-dependent DNA ligase LigA [Bacillus subtilis subsp. subtilis str. 168] gi|221308499|ref|ZP_03590346.1| NAD-dependent DNA ligase LigA [Bacillus subtilis subsp. subtilis str. 168] gi|221312822|ref|ZP_03594627.1| NAD-dependent DNA ligase LigA [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317746|ref|ZP_03599040.1| NAD-dependent DNA ligase LigA [Bacillus subtilis subsp. subtilis str. JH642] gi|221322025|ref|ZP_03603319.1| NAD-dependent DNA ligase LigA [Bacillus subtilis subsp. subtilis str. SMY] gi|7673987|sp|O31498|DNLJ_BACSU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|2632976|emb|CAB12482.1| DNA ligase [Bacillus subtilis subsp. subtilis str. 168] Length = 668 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A E L + + YY LD+P D YDR+ + L A++E+ P+L D P Sbjct: 1 MDKETAKQRAEELRRTINKYSYEYYTLDEPSVPDAEYDRLMQELIAIEEEHPDLRTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|315180839|gb|ADT87753.1| DNA ligase [Vibrio furnissii NCTC 11218] Length = 669 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L +H YY DDP D YDR+ L L+ + PEL D P VG Sbjct: 4 VEQRLTELKDTLHYHAIRYYVEDDPTIPDAEYDRLMRELLDLEARHPELVTPDSPSQRVG 63 >gi|320105506|ref|YP_004181096.1| NAD-dependent DNA ligase [Terriglobus saanensis SP1PR4] gi|319924027|gb|ADV81102.1| DNA ligase, NAD-dependent [Terriglobus saanensis SP1PR4] Length = 694 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S + E L HH+ YY LD P +D YD + L AL+ + PEL + P Sbjct: 1 MSPEQRASE---LRAEIEHHEHAYYVLDKPEISDAQYDALVNLLKALETEHPELVTPESP 57 Query: 114 WNTVG 118 VG Sbjct: 58 TQRVG 62 >gi|321314391|ref|YP_004206678.1| NAD-dependent DNA ligase LigA [Bacillus subtilis BSn5] gi|320020665|gb|ADV95651.1| NAD-dependent DNA ligase LigA [Bacillus subtilis BSn5] Length = 668 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A E L + + YY LD+P D YDR+ + L A++E+ P+L D P Sbjct: 1 MDKETAKQRAEELRRTINKYSYEYYTLDEPSVPDAEYDRLMQELIAIEEEHPDLRTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|304312656|ref|YP_003812254.1| DNA ligase, NAD-dependent [gamma proteobacterium HdN1] gi|301798389|emb|CBL46613.1| DNA ligase, NAD-dependent [gamma proteobacterium HdN1] Length = 677 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 31/64 (48%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S E + L H YY LDDP D YDR+ +RL AL++ P+L +D P Sbjct: 4 SSASDREEAQALRAQLQEHNYRYYVLDDPSVPDSEYDRLFQRLLALEQAHPDLITQDSPT 63 Query: 115 NTVG 118 VG Sbjct: 64 QRVG 67 >gi|288919113|ref|ZP_06413452.1| DNA ligase, NAD-dependent [Frankia sp. EUN1f] gi|288349457|gb|EFC83695.1| DNA ligase, NAD-dependent [Frankia sp. EUN1f] Length = 715 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 26/72 (36%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D L + H YY LD P D YD + LD +++Q+P Sbjct: 25 DAGVPEAEAPDAAVRARAAELARDLEEHAHRYYVLDAPTIADAEYDALLRELDQIEQQYP 84 Query: 106 ELFDEDHPWNTV 117 EL D P V Sbjct: 85 ELRTADSPTQKV 96 >gi|56696562|ref|YP_166919.1| DNA ligase, NAD-dependent [Ruegeria pomeroyi DSS-3] gi|81349987|sp|Q5LST6|DNLJ_SILPO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|56678299|gb|AAV94965.1| DNA ligase, NAD-dependent [Ruegeria pomeroyi DSS-3] Length = 739 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ EA E+ L + Y+ LD P +D YD + +R ++ +FP L D P Sbjct: 1 MTEAEAAQELARLAGLLAQANLAYHTLDAPEISDADYDALKQRNAEIEARFPHLKRPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SEQVG 65 >gi|121602535|ref|YP_989218.1| NAD-dependent DNA ligase LigA [Bartonella bacilliformis KC583] gi|166215397|sp|A1UTB5|DNLJ_BARBK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|120614712|gb|ABM45313.1| DNA ligase, NAD-dependent [Bartonella bacilliformis KC583] Length = 717 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 32/70 (45%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K +L+ EA E+E+L K H Y D P +D YD + R ++ FPEL Sbjct: 3 KDAKNLTALEAERELEWLAKEIARHDVLYNNHDQPEISDARYDALRRRNIEIETLFPELV 62 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 63 RADSPSYKVG 72 >gi|291483102|dbj|BAI84177.1| NAD-dependent DNA ligase LigA [Bacillus subtilis subsp. natto BEST195] Length = 668 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A E L + + YY LD+P D YDR+ + L A++E+ P+L D P Sbjct: 1 MDKETAKQRAEELRRTINKYSYEYYTLDEPSVPDAEYDRLMQELIAIEEEHPDLRTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|269216606|ref|ZP_06160460.1| DNA ligase, NAD-dependent [Slackia exigua ATCC 700122] gi|269130135|gb|EEZ61217.1| DNA ligase, NAD-dependent [Slackia exigua ATCC 700122] Length = 709 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 27/66 (40%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +L V L K HH YY D P +D +D + L L++ PEL D Sbjct: 13 ALDADGTRARVRALRKEIEHHTYLYYAKDAPEISDAAFDSLMRELRELEQAHPELIDPTS 72 Query: 113 PWNTVG 118 P VG Sbjct: 73 PTQRVG 78 >gi|319408814|emb|CBI82471.1| DNA ligase [Bartonella schoenbuchensis R1] Length = 718 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 32/72 (44%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 V +L+ EA E+E+L K H Y D P +D YD + R ++ FPE Sbjct: 2 DKNAVKNLTALEAASELEWLAKEIARHDVLYNNNDQPEISDAQYDALRRRNTEIEALFPE 61 Query: 107 LFDEDHPWNTVG 118 L D P +G Sbjct: 62 LIRTDSPSYKIG 73 >gi|119898292|ref|YP_933505.1| DNA ligase (NAD+) [Azoarcus sp. BH72] gi|166215393|sp|A1K713|DNLJ_AZOSB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|119670705|emb|CAL94618.1| DNA ligase (NAD+) [Azoarcus sp. BH72] Length = 693 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 21/50 (42%) Query: 69 IALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P D YDR+ L ++ PEL D P VG Sbjct: 17 EIARHNHAYYVLDTPTIPDAEYDRLFRELQDIEAAHPELLTPDSPTQRVG 66 >gi|325576592|ref|ZP_08147310.1| NAD-dependent DNA ligase LigA [Haemophilus parainfluenzae ATCC 33392] gi|325161155|gb|EGC73270.1| NAD-dependent DNA ligase LigA [Haemophilus parainfluenzae ATCC 33392] Length = 675 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 +K + ++ + +++ L ++ Y+ LD+P D YDR+ +L AL+ PEL Sbjct: 2 SKPLENIMSLQ--QQIDTLRHDLRRYEYEYHVLDNPTIPDAEYDRLFHQLKALEAAHPEL 59 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 60 ITADSPTQRVG 70 >gi|302542307|ref|ZP_07294649.1| DNA ligase, NAD-dependent [Streptomyces hygroscopicus ATCC 53653] gi|302459925|gb|EFL23018.1| DNA ligase, NAD-dependent [Streptomyces himastatinicus ATCC 53653] Length = 740 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 31/62 (50%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 EA E L + H+ YY D P+ +D +DR+ RL+AL+E PEL D P Sbjct: 10 PTEARDEHAKLAEQVEEHRFRYYVKDAPIVSDAEFDRLLRRLEALEEDHPELRTPDSPTQ 69 Query: 116 TV 117 V Sbjct: 70 KV 71 >gi|108798849|ref|YP_639046.1| NAD-dependent DNA ligase LigA [Mycobacterium sp. MCS] gi|119867964|ref|YP_937916.1| NAD-dependent DNA ligase LigA [Mycobacterium sp. KMS] gi|126434449|ref|YP_001070140.1| NAD-dependent DNA ligase LigA [Mycobacterium sp. JLS] gi|123369452|sp|Q1BAU4|DNLJ_MYCSS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166216212|sp|A3PXM2|DNLJ_MYCSJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166216213|sp|A1UE68|DNLJ_MYCSK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|108769268|gb|ABG07990.1| DNA ligase, NAD-dependent [Mycobacterium sp. MCS] gi|119694053|gb|ABL91126.1| DNA ligase, NAD-dependent [Mycobacterium sp. KMS] gi|126234249|gb|ABN97649.1| DNA ligase, NAD-dependent [Mycobacterium sp. JLS] Length = 701 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%) Query: 47 KAKKVTSLSKGEAMIEVEY--LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 A ++ EA + + L HQ YY D P+ +D +D++ ++L+AL+ + Sbjct: 8 DAGPQEQATEAEAELRHRWQALADEVRDHQFRYYVRDAPVISDADFDKLFQQLEALEAEH 67 Query: 105 PELFDEDHPWNTVG 118 PEL D P VG Sbjct: 68 PELRAPDSPTQLVG 81 >gi|319793880|ref|YP_004155520.1| DNA ligase, NAD-dependent [Variovorax paradoxus EPS] gi|315596343|gb|ADU37409.1| DNA ligase, NAD-dependent [Variovorax paradoxus EPS] Length = 694 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 28/53 (52%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + H YY LD P D YD++ +RL AL+ +FPEL D P VG Sbjct: 14 LSEQLHKHAHLYYVLDAPELPDAEYDKLFQRLQALETEFPELRTPDSPTQRVG 66 >gi|330433127|gb|AEC18186.1| NAD-dependent DNA ligase LigA [Gallibacterium anatis UMN179] Length = 671 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 31/56 (55%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L +H+ Y+ LD+P+ D YDR+ +L L+ + PEL +D P VG Sbjct: 8 IEQLRNDLRYHEYQYHVLDNPVIPDAEYDRMMNQLKRLEAEHPELITDDSPTQRVG 63 >gi|225018630|ref|ZP_03707822.1| hypothetical protein CLOSTMETH_02580 [Clostridium methylpentosum DSM 5476] gi|224948624|gb|EEG29833.1| hypothetical protein CLOSTMETH_02580 [Clostridium methylpentosum DSM 5476] Length = 659 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K +A + V L K +H YY LDDP +D YD + L+ L+ +FPEL ++ P Sbjct: 1 MDKKDAQLRVAELTKQLHYHSHRYYVLDDPEISDFDYDAMLRELETLEAEFPELRSDNSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TVRVG 65 >gi|257095174|ref|YP_003168815.1| NAD-dependent DNA ligase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047698|gb|ACV36886.1| DNA ligase, NAD-dependent [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 675 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 25/58 (43%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + YY LD P D YDR+ L AL+ + PEL D P VG Sbjct: 5 ERLHSLRAEIERYDHEYYVLDAPSIADADYDRLFRELQALEAEHPELVSRDSPTQRVG 62 >gi|124267002|ref|YP_001021006.1| DNA ligase (NAD+) [Methylibium petroleiphilum PM1] gi|166215820|sp|A2SGT2|DNLJ_METPP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|124259777|gb|ABM94771.1| DNA ligase (NAD+) [Methylibium petroleiphilum PM1] Length = 677 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 24/61 (39%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + L + +H YY LD P D YDR+ L AL+ P L D P Sbjct: 6 EDPAARAAQLREQLEYHAHRYYVLDAPEIPDAEYDRLFTELQALEAAHPGLRTPDSPTQR 65 Query: 117 V 117 V Sbjct: 66 V 66 >gi|300311482|ref|YP_003775574.1| NAD-dependent DNA ligase [Herbaspirillum seropedicae SmR1] gi|300074267|gb|ADJ63666.1| NAD-dependent DNA ligase (contains BRCT domain type II) protein [Herbaspirillum seropedicae SmR1] Length = 688 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 24/53 (45%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L H YY LD P D YDR+ + L AL+ PEL D P VG Sbjct: 25 LRADLNRHNYSYYVLDQPSIPDAEYDRLFQELQALETAHPELLTPDSPTQRVG 77 >gi|194466912|ref|ZP_03072899.1| DNA ligase, NAD-dependent [Lactobacillus reuteri 100-23] gi|194453948|gb|EDX42845.1| DNA ligase, NAD-dependent [Lactobacillus reuteri 100-23] Length = 680 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 37/73 (50%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 +K V L+ EA E++ L K YY D+P D +YDR +RL L+EQFP Sbjct: 3 EKQTPVKELTLQEAQDEIKPLRAKLTKWGKEYYEQDNPTVEDHVYDRAYQRLVQLEEQFP 62 Query: 106 ELFDEDHPWNTVG 118 +L D P VG Sbjct: 63 QLVSADSPTQRVG 75 >gi|6561410|gb|AAF16907.1|AF173987_5 DNA ligase [Rhodothermus marinus DSM 4252] Length = 154 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Query: 29 TLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDG 88 T EA+ L L + + + + ++ + EA L ++ H YY LD+PL D Sbjct: 9 TAEARLLEATHTLLQTV-RQRDLEAIDRKEAEALAARLREVLNQHAYRYYVLDNPLIPDA 67 Query: 89 LYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YD + + L L+ +FPEL D P VG Sbjct: 68 DYDLLMQALRKLEARFPELVTPDSPTQRVG 97 >gi|295107089|emb|CBL04632.1| DNA ligase, NAD-dependent [Gordonibacter pamelaeae 7-10-1-b] Length = 731 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 5/86 (5%) Query: 38 KRALESWLDKAKKV-TSLSKGEA----MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDR 92 K A+E+ D+ + + + EA +E L + HH YY D P +DG +D Sbjct: 18 KTAVENMADEQQNLLDERALAEATSDPAARIEALRREIEHHTYLYYAQDAPEISDGAFDS 77 Query: 93 VSERLDALQEQFPELFDEDHPWNTVG 118 + L L+ PEL D P VG Sbjct: 78 LMRELRELEAAHPELVDPSSPTQRVG 103 >gi|255658313|ref|ZP_05403722.1| DNA ligase, NAD-dependent [Mitsuokella multacida DSM 20544] gi|260849632|gb|EEX69639.1| DNA ligase, NAD-dependent [Mitsuokella multacida DSM 20544] Length = 675 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 34/64 (53%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S + E+ L K +H YY D+P +D YD++ RL A++ ++PEL ++ P Sbjct: 9 SIQQVKKELTELRKTIRYHNNRYYNEDNPEISDYEYDQLMLRLKAIEAKYPELITKNSPT 68 Query: 115 NTVG 118 VG Sbjct: 69 QVVG 72 >gi|88810628|ref|ZP_01125885.1| DNA ligase, NAD-dependent [Nitrococcus mobilis Nb-231] gi|88792258|gb|EAR23368.1| DNA ligase, NAD-dependent [Nitrococcus mobilis Nb-231] Length = 672 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 26/64 (40%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + V L H Y+ LDDP +D YD + L AL+ P+L D P Sbjct: 5 ERAAVERRVAALRDQIEQHNYRYFVLDDPQVSDADYDVLMRELQALEADHPDLVSPDSPT 64 Query: 115 NTVG 118 VG Sbjct: 65 QRVG 68 >gi|94499335|ref|ZP_01305873.1| DNA ligase, NAD-dependent [Oceanobacter sp. RED65] gi|94428967|gb|EAT13939.1| DNA ligase, NAD-dependent [Oceanobacter sp. RED65] Length = 694 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 4/73 (5%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D KV + + V L YY LDDP D YDR+ L L+ + P Sbjct: 13 DNVPKVDDAT----LTRVAELRDELNRANHAYYVLDDPSIPDAEYDRLFHELKGLESKHP 68 Query: 106 ELFDEDHPWNTVG 118 EL +D P VG Sbjct: 69 ELLTKDSPTQRVG 81 >gi|323697702|ref|ZP_08109614.1| DNA ligase, NAD-dependent [Desulfovibrio sp. ND132] gi|323457634|gb|EGB13499.1| DNA ligase, NAD-dependent [Desulfovibrio desulfuricans ND132] Length = 684 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + V L + HH YY LDDP +D +D + L AL+ + PEL D + P Sbjct: 1 MVPESVAERVAELRQKIDHHNYRYYVLDDPEISDQEFDVLFRELAALEAEHPELDDPNSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TRRVG 65 >gi|302878427|ref|YP_003846991.1| DNA ligase, NAD-dependent [Gallionella capsiferriformans ES-2] gi|302581216|gb|ADL55227.1| DNA ligase, NAD-dependent [Gallionella capsiferriformans ES-2] Length = 674 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 24/65 (36%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + ++ L H YY LD P D YD + L L+ Q PE D P Sbjct: 1 MVSAVVQQRIKALRSEIEAHNYQYYVLDAPTVPDAGYDTLFRELQRLEAQHPEFLTSDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|94310370|ref|YP_583580.1| DNA ligase, NAD-dependent [Cupriavidus metallidurans CH34] gi|123383876|sp|Q1LNG5|DNLJ_RALME RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|93354222|gb|ABF08311.1| DNA ligase, NAD(+)-dependent [Cupriavidus metallidurans CH34] Length = 721 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++L + + YY LD P D YD + L AL+ + PEL D P VG Sbjct: 21 AERAQWLREELERYSYQYYVLDAPTIPDADYDALFIELQALEAEHPELLTPDSPTQRVG 79 >gi|320102706|ref|YP_004178297.1| NAD-dependent DNA ligase [Isosphaera pallida ATCC 43644] gi|319749988|gb|ADV61748.1| DNA ligase, NAD-dependent [Isosphaera pallida ATCC 43644] Length = 896 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 32/64 (50%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + +E L + HH + YY P+ +D YDR+ + L+AL+ + P+L D P Sbjct: 10 TDDPIRDRIERLRREIEHHNRLYYVEAAPVISDAEYDRLVKDLEALEAERPDLVTPDSPT 69 Query: 115 NTVG 118 VG Sbjct: 70 QRVG 73 >gi|189499438|ref|YP_001958908.1| DNA ligase, NAD-dependent [Chlorobium phaeobacteroides BS1] gi|254781285|sp|B3EM49|DNLJ_CHLPB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|189494879|gb|ACE03427.1| DNA ligase, NAD-dependent [Chlorobium phaeobacteroides BS1] Length = 684 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 34/65 (52%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K +A+ E+ L + H YY L P +D YD + E+L AL+ +FPEL D P Sbjct: 1 MDKKQAVAEIIRLREEIDRHNYRYYVLARPEISDFQYDAMLEKLVALEGEFPELKTSDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|261345310|ref|ZP_05972954.1| DNA ligase, NAD-dependent [Providencia rustigianii DSM 4541] gi|282566645|gb|EFB72180.1| DNA ligase, NAD-dependent [Providencia rustigianii DSM 4541] Length = 678 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L + HH+ Y+ LD P D YD++ + L L+ + PEL D P VG Sbjct: 11 KQKIDSLKQQLRHHEYLYHVLDAPEIPDVEYDKLMQELKGLEAENPELITTDSPTQRVG 69 >gi|304317508|ref|YP_003852653.1| DNA ligase, NAD-dependent [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779010|gb|ADL69569.1| DNA ligase, NAD-dependent [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 659 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ E ++ L HH YY LD P +D YD + L L+E+ PE D P Sbjct: 1 MTIEE---RIKELKDKLNHHNYMYYVLDRPEISDYEYDMMMRELIKLEEEHPEFKTPDSP 57 Query: 114 WNTVG 118 VG Sbjct: 58 TQRVG 62 >gi|7673996|sp|O87703|DNLJ_BACST RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|3688229|emb|CAA09732.1| DNA ligase [Geobacillus stearothermophilus] Length = 670 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A L ++ + YY LD P D YDR+ + L A++EQ+PEL D P Sbjct: 1 MDRQQAERRAAELRELLNRYGYEYYVLDRPSVPDAEYDRLMQELIAIEEQYPELKTSDSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 TQRIG 65 >gi|238063192|ref|ZP_04607901.1| DNA ligase, NAD-dependent [Micromonospora sp. ATCC 39149] gi|237885003|gb|EEP73831.1| DNA ligase, NAD-dependent [Micromonospora sp. ATCC 39149] Length = 702 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EA L + HQ YY LD P +D +DR L+AL+ +FP L D P + Sbjct: 16 EARERHATLSQELTEHQYRYYVLDAPTVSDAEFDRQLRELEALEAEFPALRTPDSPTQRI 75 Query: 118 G 118 G Sbjct: 76 G 76 >gi|163845839|ref|YP_001633883.1| DNA ligase, NAD-dependent [Chloroflexus aurantiacus J-10-fl] gi|222523550|ref|YP_002568020.1| DNA ligase, NAD-dependent [Chloroflexus sp. Y-400-fl] gi|190359243|sp|A9WCA1|DNLJ_CHLAA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781286|sp|B9LHI6|DNLJ_CHLSY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|163667128|gb|ABY33494.1| DNA ligase, NAD-dependent [Chloroflexus aurantiacus J-10-fl] gi|222447429|gb|ACM51695.1| DNA ligase, NAD-dependent [Chloroflexus sp. Y-400-fl] Length = 709 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 28/64 (43%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S + L + + YY LDDP+ +D YD + L AL+ PEL D P Sbjct: 1 MSHTTVADRINELRSLIRRYDYHYYVLDDPIVSDAEYDALMTELRALEAAHPELITPDSP 60 Query: 114 WNTV 117 V Sbjct: 61 TQRV 64 >gi|126736446|ref|ZP_01752187.1| DNA ligase, NAD-dependent [Roseobacter sp. CCS2] gi|126713984|gb|EBA10854.1| DNA ligase, NAD-dependent [Roseobacter sp. CCS2] Length = 715 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 35/69 (50%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V SLS +A E+ +L Y+R D P +D YD + R A++ QFP+L Sbjct: 16 PVASLSPEQATKELSWLATQLNAANTAYHRDDAPDISDATYDALKRRNAAIEAQFPDLKR 75 Query: 110 EDHPWNTVG 118 +D P TVG Sbjct: 76 QDSPSETVG 84 >gi|169630426|ref|YP_001704075.1| NAD-dependent DNA ligase LigA [Mycobacterium abscessus ATCC 19977] gi|254781373|sp|B1MDV2|DNLJ_MYCA9 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|169242393|emb|CAM63421.1| DNA ligase (polydeoxyribonucleotide synthase NAD+) [Mycobacterium abscessus] Length = 681 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 32/62 (51%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + L + HQ YY D P+ +DG +D + RL AL+EQ+PEL D P Sbjct: 3 SDIQRQWGELAEEVRGHQFRYYVKDAPVISDGQFDELLRRLTALEEQYPELRTPDSPTQL 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|171059186|ref|YP_001791535.1| DNA ligase, NAD-dependent [Leptothrix cholodnii SP-6] gi|254781357|sp|B1Y6D4|DNLJ_LEPCP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|170776631|gb|ACB34770.1| DNA ligase, NAD-dependent [Leptothrix cholodnii SP-6] Length = 768 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 A +L HH YY LD P D YDR+ + L A++ +P L D P V Sbjct: 34 AAARAAWLRSTLQHHAHLYYVLDAPELPDAEYDRLFQELQAIEAMYPALRTADSPTQRV 92 >gi|148557620|ref|YP_001265202.1| DNA ligase, NAD-dependent [Sphingomonas wittichii RW1] gi|190359290|sp|A5VFJ8|DNLJ_SPHWW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|148502810|gb|ABQ71064.1| DNA ligase, NAD-dependent [Sphingomonas wittichii RW1] Length = 708 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 28/64 (43%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 ++ +A + +L H Y+ D P +D YD + AL+ ++P L D P Sbjct: 3 TESQAAERLAFLAAEIARHNALYHGEDAPEISDADYDALMRENAALEAEYPHLVRADSPS 62 Query: 115 NTVG 118 VG Sbjct: 63 KLVG 66 >gi|330960233|gb|EGH60493.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. maculicola str. ES4326] Length = 787 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 VETRILELRAELDQHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|148544657|ref|YP_001272027.1| DNA ligase, NAD-dependent [Lactobacillus reuteri DSM 20016] gi|184154010|ref|YP_001842351.1| NAD-dependent DNA ligase [Lactobacillus reuteri JCM 1112] gi|227363780|ref|ZP_03847887.1| DNA ligase, NAD-dependent [Lactobacillus reuteri MM2-3] gi|325682991|ref|ZP_08162507.1| NAD-dependent DNA ligase LigA [Lactobacillus reuteri MM4-1A] gi|209572830|sp|A5VLG6|DNLJ_LACRD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781354|sp|B2G8T9|DNLJ_LACRJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|148531691|gb|ABQ83690.1| DNA ligase, NAD-dependent [Lactobacillus reuteri DSM 20016] gi|183225354|dbj|BAG25871.1| NAD-dependent DNA ligase [Lactobacillus reuteri JCM 1112] gi|227071137|gb|EEI09453.1| DNA ligase, NAD-dependent [Lactobacillus reuteri MM2-3] gi|324977341|gb|EGC14292.1| NAD-dependent DNA ligase LigA [Lactobacillus reuteri MM4-1A] Length = 680 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 37/73 (50%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 +K V L+ EA E++ L K YY D+P D +YDR +RL L+EQFP Sbjct: 3 EKQTPVKELTLQEAQDEIKPLRAKLTKWGKEYYEQDNPTVEDHVYDRAYQRLVQLEEQFP 62 Query: 106 ELFDEDHPWNTVG 118 +L D P VG Sbjct: 63 QLVSADSPTQRVG 75 >gi|39936579|ref|NP_948855.1| DNA ligase [Rhodopseudomonas palustris CGA009] gi|39650435|emb|CAE28958.1| DNA ligase [Rhodopseudomonas palustris CGA009] Length = 692 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 30/55 (54%) Query: 64 EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L H K YY+ D P +D YD + RL+A++++FPEL + P TVG Sbjct: 1 MRLRLEIEGHDKAYYQDDAPKISDADYDALRRRLEAIEQKFPELVNASSPTQTVG 55 >gi|194289797|ref|YP_002005704.1| DNA ligase [Cupriavidus taiwanensis LMG 19424] gi|254781303|sp|B3R2C2|DNLJ_CUPTR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|193223632|emb|CAQ69639.1| DNA ligase [Cupriavidus taiwanensis LMG 19424] Length = 709 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 26/58 (44%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V +L + H YY LD P D YD + L AL+ + PEL D P VG Sbjct: 26 SRVAWLREELDRHNYQYYVLDAPTVPDAEYDALFSELMALELEHPELQTPDSPTQRVG 83 >gi|258510685|ref|YP_003184119.1| DNA ligase, NAD-dependent [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477411|gb|ACV57730.1| DNA ligase, NAD-dependent [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 684 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++LS EA + L + +H + YY D+P +D +D + L L+ ++PEL D Sbjct: 8 SALSLEEARARAKVLREQIEYHNRKYYLEDNPEISDAEWDALMRDLIELERKYPELVDPA 67 Query: 112 HPWNTVG 118 P VG Sbjct: 68 SPTQRVG 74 >gi|116334213|ref|YP_795740.1| NAD-dependent DNA ligase [Lactobacillus brevis ATCC 367] gi|122269104|sp|Q03Q13|DNLJ_LACBA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116099560|gb|ABJ64709.1| NAD-dependent DNA ligase [Lactobacillus brevis ATCC 367] Length = 676 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 34/70 (48%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K + +L+ +A E L L K YY D P D +YDRV RL AL+ FPE+ Sbjct: 4 KPIKTLTVEQAAEEAADLRPQLLEWGKQYYEADAPSVEDDVYDRVYARLVALETAFPEIV 63 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 64 TPDSPTQRVG 73 >gi|154685157|ref|YP_001420318.1| NAD-dependent DNA ligase LigA [Bacillus amyloliquefaciens FZB42] gi|166215394|sp|A7Z261|DNLJ_BACA2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|154351008|gb|ABS73087.1| LigA [Bacillus amyloliquefaciens FZB42] Length = 669 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A E L + + YY LD+P D YDR+ + L A++E+ PEL D P Sbjct: 2 MDKETAKHRAEELRRTIDQYSYEYYTLDEPSVPDSEYDRLMQELIAIEEEHPELRTPDSP 61 Query: 114 WNTVG 118 VG Sbjct: 62 TQRVG 66 >gi|71907364|ref|YP_284951.1| NAD-dependent DNA ligase [Dechloromonas aromatica RCB] gi|123746888|sp|Q47FA0|DNLJ_DECAR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|71846985|gb|AAZ46481.1| NAD-dependent DNA ligase [Dechloromonas aromatica RCB] Length = 683 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 27/63 (42%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + + H YY LD P D YD++ L L++Q+PEL D P + Sbjct: 4 PEDVAKRAAWYRSELERHSYAYYVLDAPTIPDTEYDKLFRELQELEQQYPELLTADSPTH 63 Query: 116 TVG 118 VG Sbjct: 64 RVG 66 >gi|52313150|emb|CAH55605.1| DNA ligase (NAD dependent) [Bacillus amyloliquefaciens FZB42] Length = 668 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A E L + + YY LD+P D YDR+ + L A++E+ PEL D P Sbjct: 1 MDKETAKHRAEELRRTIDQYSYEYYTLDEPSVPDSEYDRLMQELIAIEEEHPELRTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|134094553|ref|YP_001099628.1| DNA ligase [Herminiimonas arsenicoxydans] gi|166215813|sp|A4G4R4|DNLJ_HERAR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|133738456|emb|CAL61501.1| DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) [Herminiimonas arsenicoxydans] Length = 696 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 2/84 (2%) Query: 35 LPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVS 94 L +K + +S + K++ S A +L H YY LD+P+ D YD++ Sbjct: 5 LFSKASKQSAATQPKEIPDASDPSARA--AWLRSELNRHNYAYYVLDNPIVPDAEYDQLF 62 Query: 95 ERLDALQEQFPELFDEDHPWNTVG 118 L AL+ PEL D P VG Sbjct: 63 RELQALEASHPELLVFDSPTQRVG 86 >gi|331013366|gb|EGH93422.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 787 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 VETRILELRAELDEHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|66045063|ref|YP_234904.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. syringae B728a] gi|75502608|sp|Q4ZVF6|DNLJ_PSEU2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|63255770|gb|AAY36866.1| NAD-dependent DNA ligase [Pseudomonas syringae pv. syringae B728a] Length = 787 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 VETRILELRAELDQHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|218289368|ref|ZP_03493602.1| DNA ligase, NAD-dependent [Alicyclobacillus acidocaldarius LAA1] gi|218240474|gb|EED07655.1| DNA ligase, NAD-dependent [Alicyclobacillus acidocaldarius LAA1] Length = 684 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++LS EA + L + +H + YY D+P +D +D + L L+ ++PEL D Sbjct: 8 SALSLEEARARAKVLREQIEYHNRKYYLEDNPEISDAEWDALMRDLIELERKYPELVDPA 67 Query: 112 HPWNTVG 118 P VG Sbjct: 68 SPTQRVG 74 >gi|39995996|ref|NP_951947.1| DNA ligase, NAD-dependent [Geobacter sulfurreducens PCA] gi|81702997|sp|Q74ER9|DNLJ_GEOSL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|39982761|gb|AAR34220.1| DNA ligase, NAD-dependent [Geobacter sulfurreducens PCA] gi|298505011|gb|ADI83734.1| DNA ligase, NAD-dependent [Geobacter sulfurreducens KN400] Length = 670 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 28/65 (43%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A V L H + YY D P TD YD + L L+ +FP+L D P Sbjct: 1 MDKQTAADRVAALRTELERHNRLYYAEDRPEITDAEYDLLFRELVDLETRFPDLAAPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|82701780|ref|YP_411346.1| DNA ligase, NAD-dependent [Nitrosospira multiformis ATCC 25196] gi|123754406|sp|Q2YBB7|DNLJ_NITMU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|82409845|gb|ABB73954.1| DNA ligase, NAD-dependent [Nitrosospira multiformis ATCC 25196] Length = 707 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E + L H YY LD P D +D++ L+ L+++ PEL D P Sbjct: 6 SEISRHMRELRDAIELHNIRYYELDTPTIPDADFDKLFRELEELEQRHPELITPDSPTQR 65 Query: 117 VG 118 VG Sbjct: 66 VG 67 >gi|254488738|ref|ZP_05101943.1| DNA ligase, NAD-dependent [Roseobacter sp. GAI101] gi|214045607|gb|EEB86245.1| DNA ligase, NAD-dependent [Roseobacter sp. GAI101] Length = 706 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 31/68 (45%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V LSK +A E+ L + + YY D P +D YD + R ++ +FP L Sbjct: 7 VQDLSKDQAAEELRRLSGLLAQANRQYYAEDAPQISDAEYDCLKRRNTEIETRFPSLKRA 66 Query: 111 DHPWNTVG 118 D P +G Sbjct: 67 DSPTEQIG 74 >gi|304415222|ref|ZP_07395930.1| DNA ligase (NAD(+)-dependent) [Candidatus Regiella insecticola LSR1] gi|304282928|gb|EFL91383.1| DNA ligase (NAD(+)-dependent) [Candidatus Regiella insecticola LSR1] Length = 674 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + ++ I HH+ Y+ LD+P D YDR+ L L+ Q+PEL D P VG Sbjct: 4 IIQQINQRRAILQHHEYQYHVLDNPEIPDAEYDRLMNELRELETQYPELICADSPTQRVG 63 >gi|330986172|gb|EGH84275.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. lachrymans str. M301315] Length = 787 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 VETRILELRAELDEHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|330428943|gb|AEC20277.1| DNA ligase [Pusillimonas sp. T7-7] Length = 698 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A E L H YY D P+ +D YD++ L L++ PEL + P VG Sbjct: 11 AAQRAETLRAEINEHNHRYYVQDAPVVSDAAYDKLMTELIELEQTHPELITPESPTQRVG 70 >gi|330981936|gb|EGH80039.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 787 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 VETRILELRAELDQHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|320323491|gb|EFW79576.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. glycinea str. B076] Length = 787 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 VETRILELRAELDEHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|237799321|ref|ZP_04587782.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022177|gb|EGI02234.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. oryzae str. 1_6] Length = 703 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 VETRILELRAELDQHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|71737941|ref|YP_274013.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. phaseolicola 1448A] gi|123775130|sp|Q48KR2|DNLJ_PSE14 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|71558494|gb|AAZ37705.1| DNA ligase, NAD-dependent [Pseudomonas syringae pv. phaseolicola 1448A] gi|320329466|gb|EFW85458.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. glycinea str. race 4] Length = 787 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 VETRILELRAELDEHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|296330120|ref|ZP_06872602.1| NAD-dependent DNA ligase LigA [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673365|ref|YP_003865037.1| NAD-dependent DNA ligase [Bacillus subtilis subsp. spizizenii str. W23] gi|296152709|gb|EFG93576.1| NAD-dependent DNA ligase LigA [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411609|gb|ADM36728.1| NAD-dependent DNA ligase [Bacillus subtilis subsp. spizizenii str. W23] Length = 668 Score = 99 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A + L + + YY LD+P D YDR+ + L A++E+ P+L D P Sbjct: 1 MDKETAKQRADELRRTINKYSYEYYTLDEPSVPDAEYDRLMQELIAIEEEHPDLRTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|295697355|ref|YP_003590593.1| DNA ligase, NAD-dependent [Bacillus tusciae DSM 2912] gi|295412957|gb|ADG07449.1| DNA ligase, NAD-dependent [Bacillus tusciae DSM 2912] Length = 677 Score = 99 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 30/63 (47%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 +G+A +E L + + YY LDDPL D YDR L L+ + PEL D P Sbjct: 3 DQGDAARRIEELRALIRRYDYHYYVLDDPLVDDAEYDRCMRELVELEARHPELVTPDSPT 62 Query: 115 NTV 117 V Sbjct: 63 QRV 65 >gi|313891779|ref|ZP_07825384.1| DNA ligase (NAD+) [Dialister microaerophilus UPII 345-E] gi|313119773|gb|EFR42960.1| DNA ligase (NAD+) [Dialister microaerophilus UPII 345-E] Length = 666 Score = 99 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + E + +V+ L + +H YY LD P +D +D++ L + ++PEL D P Sbjct: 1 MITNEIISKVKKLREELRYHSYLYYVLDKPEISDFEFDKMYRELVDFESKYPELITPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|227530245|ref|ZP_03960294.1| DNA ligase (NAD(+)) [Lactobacillus vaginalis ATCC 49540] gi|227349834|gb|EEJ40125.1| DNA ligase (NAD(+)) [Lactobacillus vaginalis ATCC 49540] Length = 680 Score = 99 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 37/73 (50%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 +++ V L+ +A E+ L K K YY D P D +YDR +RL ++++FP Sbjct: 3 NQSIPVAQLTLDQAKEEIGPLRKQIAQWGKEYYEQDSPTVEDYVYDRQYQRLVQIEQRFP 62 Query: 106 ELFDEDHPWNTVG 118 EL D P VG Sbjct: 63 ELQTPDSPTQQVG 75 >gi|29829290|ref|NP_823924.1| NAD-dependent DNA ligase LigA [Streptomyces avermitilis MA-4680] gi|81719851|sp|Q82JK7|DNLJ_STRAW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|29606397|dbj|BAC70459.1| putative DNA ligase [Streptomyces avermitilis MA-4680] Length = 730 Score = 99 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 31/62 (50%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 EA + L + H+ YY D P+ +D +D + L+AL+E++PEL D P Sbjct: 13 PAEAREKHAQLAEQIEEHRFRYYVKDAPVVSDAEFDTLLRSLEALEEEYPELRTPDSPTQ 72 Query: 116 TV 117 V Sbjct: 73 KV 74 >gi|330973309|gb|EGH73375.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. aceris str. M302273PT] Length = 670 Score = 99 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 VETRILELRAELDQHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|317121135|ref|YP_004101138.1| DNA ligase, NAD-dependent [Thermaerobacter marianensis DSM 12885] gi|315591115|gb|ADU50411.1| DNA ligase, NAD-dependent [Thermaerobacter marianensis DSM 12885] Length = 764 Score = 99 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 23/50 (46%) Query: 69 IALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY LD P D YD + L L+ +FPE+ D P VG Sbjct: 34 QIRHHDYLYYVLDRPEIDDAAYDALMRELRELEARFPEIVTPDSPTQRVG 83 >gi|330889906|gb|EGH22567.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. mori str. 301020] Length = 787 Score = 99 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 VETRILELRAELDEHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|224369899|ref|YP_002604063.1| LigA1 [Desulfobacterium autotrophicum HRM2] gi|254781310|sp|C0QJ86|DNLJ_DESAH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|223692616|gb|ACN15899.1| LigA1 [Desulfobacterium autotrophicum HRM2] Length = 685 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 33/64 (51%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S E L + H Y+ DDP+ +DG YDR+ +RL A++ QFPEL D P Sbjct: 7 SFDRIKKEARLLREQLHVHNINYHVKDDPVISDGEYDRMMQRLIAIETQFPELSTPDSPT 66 Query: 115 NTVG 118 +G Sbjct: 67 RRIG 70 >gi|328885211|emb|CCA58450.1| DNA ligase [Streptomyces venezuelae ATCC 10712] Length = 726 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 33/62 (53%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 EA + L + H+ YY D P+ +DG +D++ L+AL+E++PEL D P Sbjct: 9 PAEAREKHAELAEQIEEHRFRYYVKDQPVISDGEFDKLLRALEALEEEYPELRTPDSPTQ 68 Query: 116 TV 117 V Sbjct: 69 KV 70 >gi|146293460|ref|YP_001183884.1| DNA ligase, NAD-dependent [Shewanella putrefaciens CN-32] gi|166216243|sp|A4Y802|DNLJ_SHEPC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145565150|gb|ABP76085.1| DNA ligase, NAD-dependent [Shewanella putrefaciens CN-32] Length = 685 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 30/67 (44%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 +S A ++ L + H YY D P TD YDR+ + L L+ QFP+ D Sbjct: 12 ADMSPENAQQVMQALSQSLNEHNIRYYVDDAPTITDSEYDRLMQCLIKLEAQFPQFIVAD 71 Query: 112 HPWNTVG 118 P VG Sbjct: 72 SPTQRVG 78 >gi|293603951|ref|ZP_06686365.1| NAD-dependent DNA ligase LigA [Achromobacter piechaudii ATCC 43553] gi|292817644|gb|EFF76711.1| NAD-dependent DNA ligase LigA [Achromobacter piechaudii ATCC 43553] Length = 700 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L H YY D+P +D YD + +L+AL+ + PEL + P VG Sbjct: 17 LRAELEQHNVRYYVYDEPSISDAEYDGLMRQLEALEAEHPELITPESPTQRVG 69 >gi|30249713|ref|NP_841783.1| NAD-dependent DNA ligase [Nitrosomonas europaea ATCC 19718] gi|75540341|sp|Q82TW6|DNLJ_NITEU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|30180750|emb|CAD85664.1| NAD-dependent DNA ligase [Nitrosomonas europaea ATCC 19718] Length = 681 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 28/65 (43%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S+ ++ L H YY D P+ D YD + L L++Q+P L D P Sbjct: 2 ISENTIEERLQALRAAIALHDFHYYVQDAPVIPDAEYDALFRTLQQLEQQYPHLVTPDSP 61 Query: 114 WNTVG 118 VG Sbjct: 62 TQRVG 66 >gi|77360026|ref|YP_339601.1| NAD-dependent DNA ligase [Pseudoalteromonas haloplanktis TAC125] gi|123730523|sp|Q3IKB8|DNLJ_PSEHT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|76874937|emb|CAI86158.1| NAD-dependent DNA ligase [Pseudoalteromonas haloplanktis TAC125] Length = 673 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 29/58 (50%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +L H YY LD P D YDR+ ++L AL+ Q PEL D P VG Sbjct: 7 EQINHLRSTLEQHSYNYYVLDTPSIPDAEYDRLLQQLSALETQHPELITADSPTQKVG 64 >gi|296046583|gb|ADG86433.1| NAD-dependent DNA ligase [Francisella novicida] Length = 673 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 29/58 (50%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +L H YY LD P D YDR+ ++L AL+ Q PEL D P VG Sbjct: 7 EQINHLRSTLEQHSYNYYVLDTPSIPDAEYDRLLQQLSALETQHPELITADSPTQKVG 64 >gi|330939980|gb|EGH43181.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. pisi str. 1704B] Length = 731 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 VETRILELRAELDQHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|332041431|gb|EGI77793.1| DNA ligase [Hylemonella gracilis ATCC 19624] Length = 738 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 23/49 (46%) Query: 69 IALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 HH YY LD P D YDR+ + L A++ PEL D P V Sbjct: 31 QLHHHAHRYYVLDAPEIPDAEYDRLFQELQAIEAAHPELRTPDSPTQRV 79 >gi|220915846|ref|YP_002491150.1| DNA ligase, NAD-dependent [Anaeromyxobacter dehalogenans 2CP-1] gi|254781252|sp|B8JD56|DNLJ_ANAD2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219953700|gb|ACL64084.1| DNA ligase, NAD-dependent [Anaeromyxobacter dehalogenans 2CP-1] Length = 687 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 27/64 (42%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K +A L YY LD PL D YDR+ L AL+ + PEL D P Sbjct: 1 MKKADASARARELRDRIRAADHAYYVLDQPLLADAEYDRLMHELQALEAEHPELVTADSP 60 Query: 114 WNTV 117 V Sbjct: 61 TQRV 64 >gi|158421773|ref|YP_001523065.1| NAD-dependent DNA ligase [Azorhizobium caulinodans ORS 571] gi|190359227|sp|A8IGY0|DNLJ_AZOC5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|158328662|dbj|BAF86147.1| NAD-dependent DNA ligase [Azorhizobium caulinodans ORS 571] Length = 739 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 36/70 (51%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K V+ LS EA E L + H YY+ D P+ +D YDR+ R + ++ +FP L Sbjct: 13 KAVSDLSATEASDEHAALSQEIASHDARYYQEDAPVISDADYDRLRRRYEDIEARFPALK 72 Query: 109 DEDHPWNTVG 118 ++D VG Sbjct: 73 NDDSLSRKVG 82 >gi|15827911|ref|NP_302174.1| NAD-dependent DNA ligase LigA [Mycobacterium leprae TN] gi|221230388|ref|YP_002503804.1| NAD-dependent DNA ligase LigA [Mycobacterium leprae Br4923] gi|7674013|sp|O33102|DNLJ_MYCLE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781376|sp|B8ZS27|DNLJ_MYCLB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|2414536|emb|CAB16425.1| DNA ligase [Mycobacterium leprae] gi|13093464|emb|CAC30658.1| DNA ligase [Mycobacterium leprae] gi|219933495|emb|CAR71800.1| DNA ligase [Mycobacterium leprae Br4923] Length = 694 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + + L + HQ YY D P+ +D +D + +RL L+EQ PEL D P V Sbjct: 12 EVLQQWRKLTEEVREHQFRYYVRDAPIISDAEFDALLDRLTVLEEQHPELCTPDSPTQLV 71 Query: 118 G 118 G Sbjct: 72 G 72 >gi|138893932|ref|YP_001124385.1| NAD-dependent DNA ligase LigA [Geobacillus thermodenitrificans NG80-2] gi|166215760|sp|A4IJY6|DNLJ_GEOTN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|134265445|gb|ABO65640.1| DNA ligase [Geobacillus thermodenitrificans NG80-2] Length = 670 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A L ++ + YY LD P D YDR+ + L A+++Q+PEL D P Sbjct: 1 MDRQQAKRRAAELRELLNRYGYEYYVLDRPSVPDAEYDRLMQELIAIEKQYPELKTSDSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 TQRIG 65 >gi|297528690|ref|YP_003669965.1| DNA ligase, NAD-dependent [Geobacillus sp. C56-T3] gi|297251942|gb|ADI25388.1| DNA ligase, NAD-dependent [Geobacillus sp. C56-T3] Length = 670 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A L ++ + YY LD P D YDR+ + L A++EQ+PEL D P Sbjct: 1 MDRQQAERRAAELRELLHRYGYEYYVLDRPSVPDAEYDRLMQELIAIEEQYPELKTSDSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 TQRIG 65 >gi|323499974|ref|ZP_08104932.1| NAD-dependent DNA ligase LigA [Vibrio sinaloensis DSM 21326] gi|323314991|gb|EGA68044.1| NAD-dependent DNA ligase LigA [Vibrio sinaloensis DSM 21326] Length = 669 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK E ++ L + +H YY D P D YDR+ L L+ Q P+L D P Sbjct: 1 MSK-EIQEKLNQLRETLHYHGVKYYVEDSPEIPDAEYDRLMRELMELESQHPDLMSLDSP 59 Query: 114 WNTVG 118 VG Sbjct: 60 SQRVG 64 >gi|320157090|ref|YP_004189469.1| DNA ligase [Vibrio vulnificus MO6-24/O] gi|319932402|gb|ADV87266.1| DNA ligase [Vibrio vulnificus MO6-24/O] Length = 669 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 57 GEAMIE-VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 E+ + +E L + +H YY D+P D YDR+ L A++ + PE D P Sbjct: 2 SESKQQYLEELKQQLHYHAVRYYVEDNPEIPDAEYDRMMRELMAIEAEHPEWISVDSPSQ 61 Query: 116 TVG 118 VG Sbjct: 62 RVG 64 >gi|312112463|ref|YP_003990779.1| DNA ligase, NAD-dependent [Geobacillus sp. Y4.1MC1] gi|311217564|gb|ADP76168.1| DNA ligase, NAD-dependent [Geobacillus sp. Y4.1MC1] Length = 670 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 36/65 (55%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + A+ +E L ++ + YY LD P D YDR+ + L AL+EQ+P+L +D P Sbjct: 1 MERQAAIKRIEELRELLNQYNYEYYVLDRPSVPDSEYDRLMQELIALEEQYPDLKTKDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|27363688|ref|NP_759216.1| NAD-dependent DNA ligase LigA [Vibrio vulnificus CMCP6] gi|81449211|sp|Q8DFK5|DNLJ_VIBVU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|27359804|gb|AAO08743.1| DNA ligase, NAD-dependent [Vibrio vulnificus CMCP6] Length = 669 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 57 GEAMIE-VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 E+ + +E L + +H YY D+P D YDR+ L A++ + PE D P Sbjct: 2 SESKQQYLEELKQQLHYHAVRYYVEDNPEIPDAEYDRMMRELMAIEAEHPEWISVDSPSQ 61 Query: 116 TVG 118 VG Sbjct: 62 RVG 64 >gi|295401729|ref|ZP_06811695.1| DNA ligase, NAD-dependent [Geobacillus thermoglucosidasius C56-YS93] gi|294976216|gb|EFG51828.1| DNA ligase, NAD-dependent [Geobacillus thermoglucosidasius C56-YS93] Length = 670 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 36/65 (55%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + A+ +E L ++ + YY LD P D YDR+ + L AL+EQ+P+L +D P Sbjct: 1 MERQAAIKRIEELRELLNQYNYEYYVLDRPSVPDSEYDRLMQELIALEEQYPDLKTKDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|120598462|ref|YP_963036.1| DNA ligase, NAD-dependent [Shewanella sp. W3-18-1] gi|166216244|sp|A1RII7|DNLJ_SHESW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|120558555|gb|ABM24482.1| DNA ligase, NAD-dependent [Shewanella sp. W3-18-1] Length = 685 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 30/67 (44%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 +S A ++ L + H YY D P TD YDR+ + L L+ QFP+ D Sbjct: 12 ADMSPENAQQVMQALSQSLNEHNIRYYVDDAPTITDSEYDRLMQCLIKLEAQFPQFIVAD 71 Query: 112 HPWNTVG 118 P VG Sbjct: 72 SPTQRVG 78 >gi|229496499|ref|ZP_04390213.1| DNA ligase, NAD-dependent [Porphyromonas endodontalis ATCC 35406] gi|229316396|gb|EEN82315.1| DNA ligase, NAD-dependent [Porphyromonas endodontalis ATCC 35406] Length = 671 Score = 99 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L H YY L PL +D +DR+ ++L L+ Q PEL P VG Sbjct: 4 VEERIEQLRSEIEQHNYRYYVLSTPLISDVEFDRLMQQLIDLEAQHPELITPTSPTQRVG 63 >gi|289626390|ref|ZP_06459344.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330866315|gb|EGH01024.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 787 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L H YY LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 VETRILELRAELDEHNYRYYVLDEPSIPDVEYDRLFHELKALEVENPHLVTPDSPTQRVG 63 >gi|258404928|ref|YP_003197670.1| DNA ligase, NAD-dependent [Desulfohalobium retbaense DSM 5692] gi|257797155|gb|ACV68092.1| DNA ligase, NAD-dependent [Desulfohalobium retbaense DSM 5692] Length = 678 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ V L + HH YY LD P +D YD + + L AL+ ++PEL D P Sbjct: 1 MAEQSVQSRVASLRETIRHHDYLYYVLDAPQISDNEYDALFKELQALEHRYPELDDPASP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TKRVG 65 >gi|37679166|ref|NP_933775.1| NAD-dependent DNA ligase LigA [Vibrio vulnificus YJ016] gi|81758078|sp|Q7MMT5|DNLJ_VIBVY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|37197908|dbj|BAC93746.1| NAD-dependent DNA ligase [Vibrio vulnificus YJ016] Length = 669 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 57 GEAMIE-VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 E+ + +E L + +H YY D+P D YDR+ L A++ + PE D P Sbjct: 2 SESKQQYLEELKQQLHYHAVRYYVEDNPEIPDAEYDRMMRELMAIEAEHPEWISVDSPSQ 61 Query: 116 TVG 118 VG Sbjct: 62 RVG 64 >gi|330897709|gb|EGH29128.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. japonica str. M301072PT] Length = 657 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 VETRILELRAQLDEHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|302185110|ref|ZP_07261783.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. syringae 642] Length = 787 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 VETRILELRAQLDEHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|283779823|ref|YP_003370578.1| DNA ligase, NAD-dependent [Pirellula staleyi DSM 6068] gi|283438276|gb|ADB16718.1| DNA ligase, NAD-dependent [Pirellula staleyi DSM 6068] Length = 676 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 28/61 (45%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + ++ L + H YY P +D YDR+ + L ++ FPEL D P V Sbjct: 7 EILERLQALREAIRRHDYLYYVRAQPEISDLEYDRLMQDLTTIEASFPELVTPDSPTQRV 66 Query: 118 G 118 G Sbjct: 67 G 67 >gi|227543584|ref|ZP_03973633.1| DNA ligase, NAD-dependent [Lactobacillus reuteri CF48-3A] gi|300909387|ref|ZP_07126848.1| NAD-dependent DNA ligase LigA [Lactobacillus reuteri SD2112] gi|227186424|gb|EEI66495.1| DNA ligase, NAD-dependent [Lactobacillus reuteri CF48-3A] gi|300893252|gb|EFK86611.1| NAD-dependent DNA ligase LigA [Lactobacillus reuteri SD2112] Length = 680 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 36/72 (50%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 K V L+ EA E++ L K YY D+P D +YDR +RL L+EQFP+ Sbjct: 4 KQTPVKELTLQEAQDEIKPLRAKLTEWGKEYYEQDNPTVEDHVYDRAYQRLVQLEEQFPQ 63 Query: 107 LFDEDHPWNTVG 118 L D P VG Sbjct: 64 LLSADSPTQRVG 75 >gi|261418603|ref|YP_003252285.1| NAD-dependent DNA ligase LigA [Geobacillus sp. Y412MC61] gi|319765418|ref|YP_004130919.1| DNA ligase, NAD-dependent [Geobacillus sp. Y412MC52] gi|261375060|gb|ACX77803.1| DNA ligase, NAD-dependent [Geobacillus sp. Y412MC61] gi|317110284|gb|ADU92776.1| DNA ligase, NAD-dependent [Geobacillus sp. Y412MC52] Length = 670 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A L ++ + YY LD P D YDR+ + L A++EQ+PEL D P Sbjct: 1 MDRQQAERRAAELRELLHRYGYEYYVLDRPSVPDAEYDRLMQELMAIEEQYPELKTSDSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 TQRIG 65 >gi|56418811|ref|YP_146129.1| NAD-dependent DNA ligase LigA [Geobacillus kaustophilus HTA426] gi|81348272|sp|Q5L3B9|DNLJ_GEOKA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|56378653|dbj|BAD74561.1| DNA ligase (polydeoxyribonucleotide synthase[NAD+]) [Geobacillus kaustophilus HTA426] Length = 670 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A L ++ + YY LD P D YDR+ + L A++EQ+PEL D P Sbjct: 1 MDRQQAERRAAELRELLHRYGYEYYVLDRPSVPDAEYDRLMQELMAIEEQYPELKTSDSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 TQRIG 65 >gi|51893963|ref|YP_076654.1| NAD-dependent DNA ligase [Symbiobacterium thermophilum IAM 14863] gi|81388077|sp|Q67KI8|DNLJ_SYMTH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|51857652|dbj|BAD41810.1| NAD-dependent DNA ligase [Symbiobacterium thermophilum IAM 14863] Length = 673 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + A + L++ HH+ YY ++P +D +D + + L L+E FP+L D P Sbjct: 1 MDRSWAERRIPELIETIRHHEYLYYVKNEPEISDAAFDELMQELKQLEEAFPDLRRPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|21673293|ref|NP_661358.1| DNA ligase, NAD-dependent [Chlorobium tepidum TLS] gi|81791793|sp|Q8KF74|DNLJ_CHLTE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|21646383|gb|AAM71700.1| DNA ligase, NAD-dependent [Chlorobium tepidum TLS] Length = 674 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K +A E+ L H + YY P +D +D++ +RL L+++FPEL D P Sbjct: 1 MDKAKAQQEIGKLRAEIERHNRLYYLEAKPEISDFEFDKLLKRLIMLEKEFPELVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|269794376|ref|YP_003313831.1| DNA ligase, NAD-dependent [Sanguibacter keddieii DSM 10542] gi|269096561|gb|ACZ20997.1| DNA ligase, NAD-dependent [Sanguibacter keddieii DSM 10542] Length = 871 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A L + HQ YY D P +D YD + L ++E P+L D P VG Sbjct: 44 ARTRWAELAETIEAHQFAYYVRDAPTVSDAEYDTLLRELGDIEEAHPQLRTPDSPTQRVG 103 >gi|126729669|ref|ZP_01745482.1| DNA ligase, NAD-dependent [Sagittula stellata E-37] gi|126709788|gb|EBA08841.1| DNA ligase, NAD-dependent [Sagittula stellata E-37] Length = 714 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 37/80 (46%) Query: 39 RALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 RA E +V +++ +A E+ L I + Y+ D P TD YDR+ R Sbjct: 4 RASEELGMNDTEVGQMTEDQAREELRALSDILGQANRAYHAEDAPELTDAEYDRLKRRNA 63 Query: 99 ALQEQFPELFDEDHPWNTVG 118 ++ +FP+L D P VG Sbjct: 64 EIEARFPQLKLADSPSEQVG 83 >gi|303247047|ref|ZP_07333322.1| DNA ligase, NAD-dependent [Desulfovibrio fructosovorans JJ] gi|302491473|gb|EFL51358.1| DNA ligase, NAD-dependent [Desulfovibrio fructosovorans JJ] Length = 693 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 28/64 (43%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + +A + L H YY LDDP+ D YD + L L+ PEL D + P Sbjct: 3 EEKDAAARLRELRAQIHEHDYRYYVLDDPVIEDAAYDALYRELRKLETAHPELDDPNSPT 62 Query: 115 NTVG 118 VG Sbjct: 63 KRVG 66 >gi|116253034|ref|YP_768872.1| NAD-dependent DNA ligase LigA [Rhizobium leguminosarum bv. viciae 3841] gi|123261370|sp|Q1ME47|DNLJ_RHIL3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|115257682|emb|CAK08780.1| putative DNA ligase [Rhizobium leguminosarum bv. viciae 3841] Length = 718 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 36/68 (52%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +L+ EA E+ L K HH Y+ D P +D YD + R DAL+ +FPEL E Sbjct: 8 VDTLTIEEAAAELARLAKEIAHHDALYHGKDQPEISDADYDALKRRNDALEVRFPELIRE 67 Query: 111 DHPWNTVG 118 D P VG Sbjct: 68 DSPSRHVG 75 >gi|326330727|ref|ZP_08197031.1| DNA ligase, NAD-dependent [Nocardioidaceae bacterium Broad-1] gi|325951568|gb|EGD43604.1| DNA ligase, NAD-dependent [Nocardioidaceae bacterium Broad-1] Length = 702 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Query: 52 TSLSKG---EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 L+ E E + L + + YY LDDP +D +D+ R++ L+EQFPEL Sbjct: 3 DDLTAEAGPEQKSEHQELAEQIEDARYRYYVLDDPTLSDADFDQKWRRINELEEQFPELR 62 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 63 TPDSPTQKVG 72 >gi|196250518|ref|ZP_03149209.1| DNA ligase, NAD-dependent [Geobacillus sp. G11MC16] gi|196210008|gb|EDY04776.1| DNA ligase, NAD-dependent [Geobacillus sp. G11MC16] Length = 670 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A L ++ + YY LD P D YDR+ + L A+++Q+PEL D P Sbjct: 1 MDRQQAKRRATELRELLNRYGYEYYVLDRPSVPDAEYDRLMQELIAIEKQYPELKTSDSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 TQRIG 65 >gi|261253653|ref|ZP_05946226.1| DNA ligase [Vibrio orientalis CIP 102891] gi|260937044|gb|EEX93033.1| DNA ligase [Vibrio orientalis CIP 102891] Length = 669 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 28/61 (45%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E ++ L + +H YY D+P D YDR+ L L+ Q PEL D P V Sbjct: 4 EIQEKLNQLRETLHYHGVKYYVEDNPEIPDAEYDRLMRDLMELESQHPELMSIDSPSQRV 63 Query: 118 G 118 G Sbjct: 64 G 64 >gi|149374973|ref|ZP_01892746.1| DNA ligase, NAD-dependent [Marinobacter algicola DG893] gi|149360862|gb|EDM49313.1| DNA ligase, NAD-dependent [Marinobacter algicola DG893] Length = 676 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 54 LSKG--EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++K + + L I H YY LDDP D YDR+ L L+ Q+P++ D Sbjct: 1 MTKASPDVISRAGELRDIITEHNYQYYVLDDPRVPDAEYDRLFRELQDLETQYPDIVTPD 60 Query: 112 HPWNTVG 118 P VG Sbjct: 61 TPTRRVG 67 >gi|225851368|ref|YP_002731602.1| DNA ligase, NAD-dependent [Persephonella marina EX-H1] gi|254781385|sp|C0QSF6|DNLJ_PERMH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|225645574|gb|ACO03760.1| DNA ligase, NAD-dependent [Persephonella marina EX-H1] Length = 714 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 36/71 (50%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 K KK +K +A +E L + +H YY L +P+ +D YD++ L ++ +FPE Sbjct: 19 KIKKEHIKTKEDAEAIIEDLRDVIRYHDWRYYVLANPVISDYEYDQLFHLLKDIESRFPE 78 Query: 107 LFDEDHPWNTV 117 L D P V Sbjct: 79 LITPDSPTQRV 89 >gi|302554316|ref|ZP_07306658.1| DNA ligase, NAD-dependent [Streptomyces viridochromogenes DSM 40736] gi|302471934|gb|EFL35027.1| DNA ligase, NAD-dependent [Streptomyces viridochromogenes DSM 40736] Length = 731 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 32/62 (51%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 EA + L + H+ YY D P+ +D +D++ L+AL++++PEL D P Sbjct: 13 PAEAREKHARLAEQIEEHRFRYYVKDAPVVSDAEFDQLLRSLEALEDEYPELRTPDSPTQ 72 Query: 116 TV 117 V Sbjct: 73 KV 74 >gi|114330949|ref|YP_747171.1| DNA ligase, NAD-dependent [Nitrosomonas eutropha C91] gi|114307963|gb|ABI59206.1| DNA ligase, NAD-dependent [Nitrosomonas eutropha C91] Length = 715 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 28/64 (43%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ ++ L H YY D P+ D YD++ L L++Q+P L D P Sbjct: 35 SEKIIEERLKALRSTIALHDFHYYVQDAPIIPDADYDKLFRTLQQLEQQYPHLITPDSPT 94 Query: 115 NTVG 118 VG Sbjct: 95 QRVG 98 >gi|166216290|sp|Q0AHH6|DNLJ_NITEC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 683 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 28/64 (43%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ ++ L H YY D P+ D YD++ L L++Q+P L D P Sbjct: 3 SEKIIEERLKALRSTIALHDFHYYVQDAPIIPDADYDKLFRTLQQLEQQYPHLITPDSPT 62 Query: 115 NTVG 118 VG Sbjct: 63 QRVG 66 >gi|328473436|gb|EGF44284.1| NAD-dependent DNA ligase LigA [Vibrio parahaemolyticus 10329] Length = 670 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L + +H YY D+P D YDR+ L ++ Q P+L D P VG Sbjct: 7 QRLEELKESLHYHAVRYYVEDNPEIPDAEYDRLMRELLEIEAQHPDLVTVDSPSQRVG 64 >gi|153838362|ref|ZP_01991029.1| DNA ligase, NAD-dependent [Vibrio parahaemolyticus AQ3810] gi|149748221|gb|EDM59080.1| DNA ligase, NAD-dependent [Vibrio parahaemolyticus AQ3810] Length = 670 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L + +H YY D+P D YDR+ L ++ Q P+L D P VG Sbjct: 7 QRLEELKESLHYHAVRYYVEDNPEIPDAEYDRLMRELLEIEAQHPDLVTVDSPSQRVG 64 >gi|82523684|emb|CAI78466.1| NAD-dependent DNA ligase [uncultured candidate division WS3 bacterium] Length = 667 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 27/59 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 A V L ++ HH + YY P DG YD + L AL+ + PEL D P V Sbjct: 7 ARARVAELRELIRHHDRKYYVDAAPEIADGEYDALMSELAALEREHPELVTADSPTRRV 65 >gi|28897574|ref|NP_797179.1| NAD-dependent DNA ligase LigA [Vibrio parahaemolyticus RIMD 2210633] gi|260878266|ref|ZP_05890621.1| DNA ligase (NAD+) [Vibrio parahaemolyticus AN-5034] gi|260895418|ref|ZP_05903914.1| DNA ligase (NAD+) [Vibrio parahaemolyticus Peru-466] gi|260903353|ref|ZP_05911748.1| DNA ligase (NAD+) [Vibrio parahaemolyticus AQ4037] gi|81728289|sp|Q87RJ4|DNLJ_VIBPA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|28805786|dbj|BAC59063.1| DNA ligase [Vibrio parahaemolyticus RIMD 2210633] gi|308088617|gb|EFO38312.1| DNA ligase (NAD+) [Vibrio parahaemolyticus Peru-466] gi|308090169|gb|EFO39864.1| DNA ligase (NAD+) [Vibrio parahaemolyticus AN-5034] gi|308107994|gb|EFO45534.1| DNA ligase (NAD+) [Vibrio parahaemolyticus AQ4037] Length = 670 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L + +H YY D+P D YDR+ L ++ Q P+L D P VG Sbjct: 7 QRLEELKESLHYHAVRYYVEDNPEIPDAEYDRLMRELLEIEAQHPDLVTVDSPSQRVG 64 >gi|322418721|ref|YP_004197944.1| NAD-dependent DNA ligase [Geobacter sp. M18] gi|320125108|gb|ADW12668.1| DNA ligase, NAD-dependent [Geobacter sp. M18] Length = 668 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + A + +L K H + YY D P TD YD + L L+++FPEL D P Sbjct: 1 MEAQAAAERIAWLSKEIERHNRLYYEQDMPEITDAEYDALFRELQELEKKFPELALPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TGRVG 65 >gi|261211985|ref|ZP_05926271.1| DNA ligase [Vibrio sp. RC341] gi|260838593|gb|EEX65244.1| DNA ligase [Vibrio sp. RC341] Length = 670 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 23/60 (38%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + H YY D P D YDR+ L ++ Q PE D P VG Sbjct: 4 VEQRLTELRQTLHEHGIRYYVEDAPTIPDAEYDRLMRELLDIEAQHPEWITPDSPSLRVG 63 >gi|319426762|gb|ADV54836.1| DNA ligase, NAD-dependent [Shewanella putrefaciens 200] Length = 685 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 30/67 (44%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 +S A ++ L + H YY D P TD YDR+ + L L+ QFP+ D Sbjct: 12 ADMSPENAQQVMQALSQSLNEHNIRYYVDDAPSITDSEYDRLMQCLIKLEAQFPQFIVAD 71 Query: 112 HPWNTVG 118 P VG Sbjct: 72 SPTQRVG 78 >gi|330879787|gb|EGH13936.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. glycinea str. race 4] Length = 347 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 VETRILELRAELDEHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|94263030|ref|ZP_01286849.1| DNA ligase (NAD+) [delta proteobacterium MLMS-1] gi|93456573|gb|EAT06681.1| DNA ligase (NAD+) [delta proteobacterium MLMS-1] Length = 678 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 30/51 (58%) Query: 68 KIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +H YY LDDP +DG YDR+ L+ L+ ++PEL D P VG Sbjct: 22 ELIAYHNHRYYVLDDPELSDGEYDRLFRELEELESRWPELVTADSPSRRVG 72 >gi|86742328|ref|YP_482728.1| DNA ligase, NAD-dependent [Frankia sp. CcI3] gi|123750794|sp|Q2J6U3|DNLJ_FRASC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|86569190|gb|ABD12999.1| DNA ligase, NAD-dependent [Frankia sp. CcI3] Length = 706 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 26/52 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 L + H YY LD P +D YDR+ L AL+E+ P+L D P V Sbjct: 29 LARELDEHAYRYYVLDSPTISDAEYDRLMAELAALEERHPDLRTPDSPTQKV 80 >gi|220920535|ref|YP_002495836.1| DNA ligase, NAD-dependent [Methylobacterium nodulans ORS 2060] gi|254781366|sp|B8ICE5|DNLJ_METNO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219945141|gb|ACL55533.1| DNA ligase, NAD-dependent [Methylobacterium nodulans ORS 2060] Length = 829 Score = 99.2 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 37/72 (51%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 +A+ V ++ +A E L H + Y+ D P+ +D YD + RL+A++E+FPE Sbjct: 7 RARPVEEMTAAQAREAHESLSAEIAEHDRRYHGEDAPIISDAEYDALRRRLEAIEERFPE 66 Query: 107 LFDEDHPWNTVG 118 L +VG Sbjct: 67 LAGTGAASVSVG 78 >gi|327399096|ref|YP_004339965.1| DNA ligase [Hippea maritima DSM 10411] gi|327181725|gb|AEA33906.1| DNA ligase [Hippea maritima DSM 10411] Length = 667 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 37/65 (56%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ EA +E L K +H YY LDDP+ +D YD + + L L+E +P+ +DE+ P Sbjct: 1 MNDREAKERIEQLRKKLHYHNYRYYVLDDPIISDSEYDMMLKELKELEESYPQFYDENSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TVRVG 65 >gi|159044058|ref|YP_001532852.1| DNA ligase [Dinoroseobacter shibae DFL 12] gi|190359252|sp|A8LK52|DNLJ_DINSH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157911818|gb|ABV93251.1| DNA ligase [Dinoroseobacter shibae DFL 12] Length = 741 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 37/73 (50%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D V +LS+ A E+ L ++ Y+R D P +D YD + +R A++ +FP Sbjct: 37 DTYVAVEALSEAAARKELARLSELLARANAEYHRDDAPSLSDADYDALKQRNAAIEARFP 96 Query: 106 ELFDEDHPWNTVG 118 +L D P + VG Sbjct: 97 DLKRGDSPSDQVG 109 >gi|240168924|ref|ZP_04747583.1| NAD-dependent DNA ligase LigA [Mycobacterium kansasii ATCC 12478] Length = 683 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 31/57 (54%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + + L + HQ YY D P+ TD +D + RL+ L+EQ+PEL D P VG Sbjct: 4 QWQDLAEQVREHQFRYYVRDAPIITDAEFDELLRRLEVLEEQYPELRTPDSPTQLVG 60 >gi|84393803|ref|ZP_00992550.1| DNA ligase [Vibrio splendidus 12B01] gi|84375600|gb|EAP92500.1| DNA ligase [Vibrio splendidus 12B01] Length = 670 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 31/63 (49%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 K + +E L + +H YY D P D YDR+ ++L ++E+ PEL D P Sbjct: 2 KESIQVTLEQLRETLHYHAVRYYVEDSPEIPDVEYDRLMQQLLKIEEENPELVTVDSPSQ 61 Query: 116 TVG 118 VG Sbjct: 62 RVG 64 >gi|197117724|ref|YP_002138151.1| NAD-dependent DNA ligase [Geobacter bemidjiensis Bem] gi|254781337|sp|B5EIJ0|DNLJ_GEOBB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|197087084|gb|ACH38355.1| DNA ligase, NAD-dependent [Geobacter bemidjiensis Bem] Length = 668 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A +++L H + YY D P TD YD + L L+ +P+L D P Sbjct: 1 MDKTAAAQRIKWLSSEIERHNRLYYEQDMPEITDAEYDALFRELKELEASYPDLALPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TGRVG 65 >gi|308172548|ref|YP_003919253.1| DNA ligase [Bacillus amyloliquefaciens DSM 7] gi|307605412|emb|CBI41783.1| DNA ligase [Bacillus amyloliquefaciens DSM 7] gi|328910657|gb|AEB62253.1| DNA ligase [Bacillus amyloliquefaciens LL3] Length = 669 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A + L + + YY LD+P D YDR+ + L A++E+ PEL D P Sbjct: 2 MDKETAKHRADELRRTIDQYSYEYYTLDEPSVPDSEYDRLMQELIAIEEEHPELRTPDSP 61 Query: 114 WNTVG 118 VG Sbjct: 62 TQRVG 66 >gi|258645494|ref|ZP_05732963.1| DNA ligase, NAD-dependent [Dialister invisus DSM 15470] gi|260402847|gb|EEW96394.1| DNA ligase, NAD-dependent [Dialister invisus DSM 15470] Length = 669 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + E + + E L K +H YY LD P TD +DR+ L L++++PE+ D P Sbjct: 1 MVTAEIIKKAEELRKKLRYHSYLYYVLDKPEITDFEFDRLYRSLVDLEKEYPEIVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|219850499|ref|YP_002464932.1| DNA ligase, NAD-dependent [Chloroflexus aggregans DSM 9485] gi|254781282|sp|B8GAC1|DNLJ_CHLAD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219544758|gb|ACL26496.1| DNA ligase, NAD-dependent [Chloroflexus aggregans DSM 9485] Length = 681 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + + L + + YY LDDP+ +D YD + L AL+ PEL D P Sbjct: 1 MNHIDVTQRINELRTLIRRYDYHYYVLDDPIVSDAEYDALMNELRALEAAHPELITPDSP 60 Query: 114 WNTV 117 V Sbjct: 61 TQRV 64 >gi|328552313|gb|AEB22805.1| NAD-dependent DNA ligase LigA [Bacillus amyloliquefaciens TA208] Length = 668 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A + L + + YY LD+P D YDR+ + L A++E+ PEL D P Sbjct: 1 MDKETAKHRADELRRTIDQYSYEYYTLDEPSVPDSEYDRLMQELIAIEEEHPELRTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|86148411|ref|ZP_01066703.1| DNA ligase [Vibrio sp. MED222] gi|85833825|gb|EAQ51991.1| DNA ligase [Vibrio sp. MED222] Length = 670 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 31/63 (49%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 K + +E L + +H YY D P D YDR+ ++L L+E+ PEL D P Sbjct: 2 KESIQVTLEQLRETLHYHAVRYYVEDSPEIPDVEYDRLMQQLLKLEEENPELVTVDSPSQ 61 Query: 116 TVG 118 VG Sbjct: 62 RVG 64 >gi|257054924|ref|YP_003132756.1| NAD-dependent DNA ligase LigA [Saccharomonospora viridis DSM 43017] gi|256584796|gb|ACU95929.1| DNA ligase, NAD-dependent [Saccharomonospora viridis DSM 43017] Length = 731 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 2/74 (2%) Query: 47 KAKKVTSLS--KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + V + E LV+ HQ YY LD P +D +D++ L+ L+ + Sbjct: 32 RTTPVEGIQDVPAEVRERHSALVEEIRGHQFRYYVLDAPTISDAEFDQLMRDLERLEAEH 91 Query: 105 PELFDEDHPWNTVG 118 P L D P TVG Sbjct: 92 PALVSPDSPTQTVG 105 >gi|184155951|ref|YP_001844291.1| NAD-dependent DNA ligase [Lactobacillus fermentum IFO 3956] gi|254781353|sp|B2GDS9|DNLJ_LACF3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|183227295|dbj|BAG27811.1| NAD-dependent DNA ligase [Lactobacillus fermentum IFO 3956] Length = 679 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 39/74 (52%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + K + V+ L+K +A E+ L + YY D+P D +YDR +RL ++++F Sbjct: 1 MSKQEAVSELTKQQAQAELTPLREQLKKWGAEYYEQDNPSVEDYVYDRAYQRLVEIEQRF 60 Query: 105 PELFDEDHPWNTVG 118 P+L D P VG Sbjct: 61 PDLVVPDSPTQRVG 74 >gi|253701546|ref|YP_003022735.1| DNA ligase, NAD-dependent [Geobacter sp. M21] gi|251776396|gb|ACT18977.1| DNA ligase, NAD-dependent [Geobacter sp. M21] Length = 668 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 28/65 (43%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A +++L H + YY D P TD YD + L L+ P+L D P Sbjct: 1 MDKTAAAQRIKWLSSEIERHNRLYYEQDMPEITDAEYDALFRELKELEASHPDLALPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TGRVG 65 >gi|289649545|ref|ZP_06480888.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. aesculi str. 2250] Length = 787 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 VETRILELRAELDEHNYRYHVLDEPSIPDVEYDRLFHELKALEVENPHLVTPDSPTQRVG 63 >gi|309389839|gb|ADO77719.1| DNA ligase, NAD-dependent [Halanaerobium praevalens DSM 2228] Length = 670 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 38/66 (57%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +L+K +A ++ L + H+ Y+ LDDP +D +D++ + L L+ +FP+L ED Sbjct: 3 NLNKEKASKKITALKEKIRKHEYKYFVLDDPSISDAEFDQLMQELIKLESEFPDLITEDS 62 Query: 113 PWNTVG 118 P VG Sbjct: 63 PTQRVG 68 >gi|197121145|ref|YP_002133096.1| DNA ligase, NAD-dependent [Anaeromyxobacter sp. K] gi|254781542|sp|B4UDH6|DNLJ_ANASK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|196170994|gb|ACG71967.1| DNA ligase, NAD-dependent [Anaeromyxobacter sp. K] Length = 687 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 26/64 (40%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K +A L YY LD PL D YDR+ L AL+ PEL D P Sbjct: 1 MKKADAPARARELRDRIRAADHAYYVLDQPLLADAEYDRLMHELQALEADHPELVTADSP 60 Query: 114 WNTV 117 V Sbjct: 61 TQRV 64 >gi|299783520|gb|ADJ41518.1| DNA ligase, NAD-dependent [Lactobacillus fermentum CECT 5716] Length = 679 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 39/74 (52%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + K + V+ L+K +A E+ L + YY D+P D +YDR +RL ++++F Sbjct: 1 MSKQEAVSELTKQQAQAELTPLREQLKKWGAEYYEQDNPSVEDYVYDRAYQRLVEIEQRF 60 Query: 105 PELFDEDHPWNTVG 118 P+L D P VG Sbjct: 61 PDLVVPDSPTQRVG 74 >gi|260774893|ref|ZP_05883794.1| DNA ligase [Vibrio coralliilyticus ATCC BAA-450] gi|260609148|gb|EEX35306.1| DNA ligase [Vibrio coralliilyticus ATCC BAA-450] Length = 669 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E + L + +H YY D+P D YDR+ L L+ + P+L D P Sbjct: 3 QEIQERLNQLRETLHYHGVKYYVEDNPEVPDAEYDRLMRELLELEAEHPDLVSIDSPSQR 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|161598439|ref|YP_120478.2| NAD-dependent DNA ligase LigA [Nocardia farcinica IFM 10152] Length = 710 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 30/61 (49%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + + L + HQ YY D P+ +DG +D + L L+++ P+L D P V Sbjct: 25 EDRVRWQRLAEEVREHQFRYYVRDAPIISDGEFDALLRELQELEDRHPDLRTPDSPTQLV 84 Query: 118 G 118 G Sbjct: 85 G 85 >gi|260662792|ref|ZP_05863686.1| DNA ligase, NAD-dependent [Lactobacillus fermentum 28-3-CHN] gi|260552873|gb|EEX25872.1| DNA ligase, NAD-dependent [Lactobacillus fermentum 28-3-CHN] Length = 679 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 39/74 (52%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + K + V+ L+K +A E+ L + YY D+P D +YDR +RL ++++F Sbjct: 1 MSKQEAVSELTKQQAQAELTPLREQLKKWGAEYYEQDNPSVEDYVYDRAYQRLVEIEQRF 60 Query: 105 PELFDEDHPWNTVG 118 P+L D P VG Sbjct: 61 PDLVVPDSPTQRVG 74 >gi|227515527|ref|ZP_03945576.1| DNA ligase (NAD(+)) [Lactobacillus fermentum ATCC 14931] gi|227086140|gb|EEI21452.1| DNA ligase (NAD(+)) [Lactobacillus fermentum ATCC 14931] Length = 679 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 39/74 (52%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + K + V+ L+K +A E+ L + YY D+P D +YDR +RL ++++F Sbjct: 1 MSKQEAVSELTKQQAQAELTPLREQLKKWGAEYYEQDNPSVEDYVYDRAYQRLVEIEQRF 60 Query: 105 PELFDEDHPWNTVG 118 P+L D P VG Sbjct: 61 PDLVVPDSPTQRVG 74 >gi|148982028|ref|ZP_01816589.1| NAD-dependent DNA ligase LigA [Vibrionales bacterium SWAT-3] gi|145960667|gb|EDK26012.1| NAD-dependent DNA ligase LigA [Vibrionales bacterium SWAT-3] Length = 670 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 31/63 (49%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 K + +E L + +H YY D P D YDR+ ++L ++E+ PEL D P Sbjct: 2 KESIQVTLEQLRETLHYHAVRYYVEDSPEIPDVEYDRLMQQLLKIEEENPELVTVDSPSQ 61 Query: 116 TVG 118 VG Sbjct: 62 RVG 64 >gi|188997338|ref|YP_001931589.1| DNA ligase, NAD-dependent [Sulfurihydrogenibium sp. YO3AOP1] gi|254781435|sp|B2V5U1|DNLJ_SULSY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|188932405|gb|ACD67035.1| DNA ligase, NAD-dependent [Sulfurihydrogenibium sp. YO3AOP1] Length = 704 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 12/98 (12%) Query: 20 TPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYR 79 T + K+L+ L +FL L+K EA VE L ++ H YY Sbjct: 3 TDERQKELIKLTYEFL------------KLDAKKLTKEEAKKIVEDLREVIRFHDWRYYV 50 Query: 80 LDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 L P+ +D YD++ + L ++ ++PEL D P V Sbjct: 51 LAQPVISDYEYDKLFKLLKDIEGKYPELITPDSPTQRV 88 >gi|221632243|ref|YP_002521464.1| DNA ligase, NAD-dependent [Thermomicrobium roseum DSM 5159] gi|254781441|sp|B9KXM2|DNLJ_THERP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|221155911|gb|ACM05038.1| DNA ligase, NAD-dependent [Thermomicrobium roseum DSM 5159] Length = 695 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 29/63 (46%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 E VE L ++ + YY L+ P +D YD + L +EQ+PEL D P Sbjct: 13 PPEVRARVEELRRLIQRYNYEYYVLNAPTVSDAEYDALMLELRRWEEQYPELVTPDSPTQ 72 Query: 116 TVG 118 VG Sbjct: 73 RVG 75 >gi|294140434|ref|YP_003556412.1| DNA ligase, NAD-dependent [Shewanella violacea DSS12] gi|293326903|dbj|BAJ01634.1| DNA ligase, NAD-dependent [Shewanella violacea DSS12] Length = 683 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 30/73 (41%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 DK + S + E+ L I H YY D P D YDR+ ++L L+ P Sbjct: 4 DKIQDHASFNIQAVAQEIAELTDILNGHNYCYYVDDAPSIPDAEYDRLLKQLKVLETAHP 63 Query: 106 ELFDEDHPWNTVG 118 E D P VG Sbjct: 64 EYCFPDSPTQRVG 76 >gi|226305867|ref|YP_002765827.1| NAD(+)-dependent DNA ligase [Rhodococcus erythropolis PR4] gi|254781402|sp|C0ZXK3|DNLJ_RHOE4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|226184984|dbj|BAH33088.1| NAD(+)-dependent DNA ligase [Rhodococcus erythropolis PR4] Length = 700 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 34/61 (55%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EA + L + HQ YY D P+ +DG +D + +L+AL+EQ+P+L D P V Sbjct: 14 EAREQWTELAEEVRQHQFRYYVRDAPVISDGAFDTLLGQLNALEEQYPDLRTPDSPTQLV 73 Query: 118 G 118 G Sbjct: 74 G 74 >gi|296445905|ref|ZP_06887856.1| DNA ligase, NAD-dependent [Methylosinus trichosporium OB3b] gi|296256573|gb|EFH03649.1| DNA ligase, NAD-dependent [Methylosinus trichosporium OB3b] Length = 713 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 2/83 (2%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 P+ R + V LS A +E L + + + YY+ DDP +D YD + + Sbjct: 8 PSPRK--RGERERPPVAELSPRRAKLEHSRLAEEIAEYDRRYYQEDDPAISDAEYDALRQ 65 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 R +AL++ FPEL + TVG Sbjct: 66 RYEALEKAFPELGGDASLTKTVG 88 >gi|153001196|ref|YP_001366877.1| DNA ligase, NAD-dependent [Shewanella baltica OS185] gi|166216241|sp|A6WPS5|DNLJ_SHEB8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|151365814|gb|ABS08814.1| DNA ligase, NAD-dependent [Shewanella baltica OS185] Length = 685 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 30/67 (44%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ A ++ L + H YY D P TD YDR+ +RL L+ +P L D Sbjct: 12 EDVTPENASQVMQALSQSLNEHNIRYYVDDAPSITDSEYDRLMQRLLKLEALYPHLIVAD 71 Query: 112 HPWNTVG 118 P VG Sbjct: 72 SPTQRVG 78 >gi|315502322|ref|YP_004081209.1| DNA ligase, nad-dependent [Micromonospora sp. L5] gi|315408941|gb|ADU07058.1| DNA ligase, NAD-dependent [Micromonospora sp. L5] Length = 717 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A L + HQ YY LD P TD +D+ L+AL+ ++P L D P VG Sbjct: 32 ARERHATLSQELTEHQYRYYVLDAPTVTDAEFDKQLRELEALEAEYPALRTPDSPTQRVG 91 >gi|256380031|ref|YP_003103691.1| DNA ligase, NAD-dependent [Actinosynnema mirum DSM 43827] gi|255924334|gb|ACU39845.1| DNA ligase, NAD-dependent [Actinosynnema mirum DSM 43827] Length = 816 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 28/63 (44%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 +A L + HQ YY LD P +DG +D + L +L++ P L D P Sbjct: 43 PADARDRHRALAEEVRGHQFRYYVLDAPTISDGEFDALLRELQSLEDAHPGLATPDSPTQ 102 Query: 116 TVG 118 VG Sbjct: 103 QVG 105 >gi|297202535|ref|ZP_06919932.1| DNA ligase, NAD-dependent [Streptomyces sviceus ATCC 29083] gi|197709937|gb|EDY53971.1| DNA ligase, NAD-dependent [Streptomyces sviceus ATCC 29083] Length = 730 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 35/69 (50%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K+ + EA + L + H+ YY D P+ +D +D++ L+AL++++PEL Sbjct: 5 KQAETTVPSEAREKHAQLAEQIEEHRFRYYVNDAPVVSDADFDKLLRSLEALEDEYPELR 64 Query: 109 DEDHPWNTV 117 D P V Sbjct: 65 TPDSPTQKV 73 >gi|119476275|ref|ZP_01616626.1| DNA ligase [marine gamma proteobacterium HTCC2143] gi|119450139|gb|EAW31374.1| DNA ligase [marine gamma proteobacterium HTCC2143] Length = 781 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L H Y+ LD+P D YDR+ +L L+ +FP+ D P VG Sbjct: 8 KQQIEELRSTVNLHNYRYHALDEPTVPDAEYDRLIRQLQVLEAKFPQFITNDSPTQRVG 66 >gi|326317205|ref|YP_004234877.1| DNA ligase, NAD-dependent [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374041|gb|ADX46310.1| DNA ligase, NAD-dependent [Acidovorax avenae subsp. avenae ATCC 19860] Length = 732 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 25/72 (34%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D E V L YY LD P D YDRV + L AL+ P Sbjct: 6 DLFSAPAQDDPEELGRRVAALRAQLHQWAHQYYVLDAPTVPDAEYDRVFQALQALEAAHP 65 Query: 106 ELFDEDHPWNTV 117 EL D P V Sbjct: 66 ELVTPDSPTQRV 77 >gi|91204173|emb|CAJ71826.1| strongly similar to DNA ligase [Candidatus Kuenenia stuttgartiensis] Length = 674 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 27/59 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 ++E L I +H YY ++P +D YD++ L L+ PEL D P V Sbjct: 5 VKEKIEQLRCIIRYHDYKYYVENNPEISDYEYDQLLRELQNLESAHPELITPDSPTQRV 63 >gi|304411949|ref|ZP_07393560.1| DNA ligase, NAD-dependent [Shewanella baltica OS183] gi|307303283|ref|ZP_07583038.1| DNA ligase, NAD-dependent [Shewanella baltica BA175] gi|304349809|gb|EFM14216.1| DNA ligase, NAD-dependent [Shewanella baltica OS183] gi|306913643|gb|EFN44065.1| DNA ligase, NAD-dependent [Shewanella baltica BA175] Length = 685 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 30/67 (44%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ A ++ L + H YY D P TD YDR+ +RL L+ +P L D Sbjct: 12 EDVTPENASQVMQALSQSLNEHNIRYYVDDAPSITDSEYDRLMQRLLKLEALYPHLIVAD 71 Query: 112 HPWNTVG 118 P VG Sbjct: 72 SPTQRVG 78 >gi|217972882|ref|YP_002357633.1| DNA ligase, NAD-dependent [Shewanella baltica OS223] gi|254781416|sp|B8EEK5|DNLJ_SHEB2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|217498017|gb|ACK46210.1| DNA ligase, NAD-dependent [Shewanella baltica OS223] Length = 685 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 30/67 (44%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ A ++ L + H YY D P TD YDR+ +RL L+ +P L D Sbjct: 12 EDVTPENASQVMQALSQSLNEHNIRYYVDDAPSITDSEYDRLMQRLLKLEALYPHLIVAD 71 Query: 112 HPWNTVG 118 P VG Sbjct: 72 SPTQRVG 78 >gi|160875869|ref|YP_001555185.1| DNA ligase, NAD-dependent [Shewanella baltica OS195] gi|190359285|sp|A9L5Z1|DNLJ_SHEB9 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|160861391|gb|ABX49925.1| DNA ligase, NAD-dependent [Shewanella baltica OS195] gi|315268060|gb|ADT94913.1| DNA ligase, NAD-dependent [Shewanella baltica OS678] Length = 685 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 30/67 (44%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ A ++ L + H YY D P TD YDR+ +RL L+ +P L D Sbjct: 12 EDVTPENASQVMQALSQSLNEHNIRYYVDDAPSITDSEYDRLMQRLLKLEALYPHLIVAD 71 Query: 112 HPWNTVG 118 P VG Sbjct: 72 SPTQRVG 78 >gi|291613759|ref|YP_003523916.1| DNA ligase, NAD-dependent [Sideroxydans lithotrophicus ES-1] gi|291583871|gb|ADE11529.1| DNA ligase, NAD-dependent [Sideroxydans lithotrophicus ES-1] Length = 701 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 27/65 (41%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + L K + WYY D P D YD++ L AL+ Q PEL D P Sbjct: 1 MINQDVTRRAALLRKQIAEYDYWYYVKDMPRIPDAEYDKLFRELQALEAQHPELLASDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|194307280|gb|ACF42137.1| DNA ligase [Mycobacterium lepromatosis] Length = 686 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 30/61 (49%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + + L + HQ YY D P+ +D +D + RL L+EQ PEL D P + Sbjct: 4 ELLRQWRKLAEEVREHQFRYYVRDAPIISDAEFDALLGRLTVLEEQHPELRTPDSPTQLI 63 Query: 118 G 118 G Sbjct: 64 G 64 >gi|323136604|ref|ZP_08071685.1| DNA ligase, NAD-dependent [Methylocystis sp. ATCC 49242] gi|322397921|gb|EFY00442.1| DNA ligase, NAD-dependent [Methylocystis sp. ATCC 49242] Length = 705 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 32/68 (47%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V LS EA E L + + + YYR D PL D YD R +AL++ FPEL Sbjct: 12 VDELSPAEARAEHARLGEDIARYDEAYYREDAPLVPDAEYDAARRRYEALEKAFPELVTP 71 Query: 111 DHPWNTVG 118 + VG Sbjct: 72 ESLTRKVG 79 >gi|302865766|ref|YP_003834403.1| DNA ligase, NAD-dependent [Micromonospora aurantiaca ATCC 27029] gi|302568625|gb|ADL44827.1| DNA ligase, NAD-dependent [Micromonospora aurantiaca ATCC 27029] Length = 717 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A L + HQ YY LD P TD +D+ L+AL+ ++P L D P VG Sbjct: 32 ARERHATLSQELTEHQYRYYVLDAPTVTDAEFDKQLRELEALEAEYPALRTPDSPTQRVG 91 >gi|330995784|ref|ZP_08319681.1| DNA ligase [Paraprevotella xylaniphila YIT 11841] gi|329574514|gb|EGG56079.1| DNA ligase [Paraprevotella xylaniphila YIT 11841] Length = 669 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 27/61 (44%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E ++E L H YY L+ P +D +DR+ L L+ PE D D P V Sbjct: 4 EVKEQIERLRSELHRHNYNYYVLNAPEISDQEFDRMMRELQDLEAAHPEFDDPDSPTRRV 63 Query: 118 G 118 G Sbjct: 64 G 64 >gi|262276434|ref|ZP_06054243.1| DNA ligase [Grimontia hollisae CIP 101886] gi|262220242|gb|EEY71558.1| DNA ligase [Grimontia hollisae CIP 101886] Length = 670 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + +++ L +H YY D P D YDR+ + L A++ + PEL D P V Sbjct: 4 DIQQKLQSLKTQLNYHGHLYYVEDKPELPDAEYDRMMQELLAIEAKHPELVTADSPSQRV 63 Query: 118 G 118 G Sbjct: 64 G 64 >gi|317489959|ref|ZP_07948451.1| DNA ligase [Eggerthella sp. 1_3_56FAA] gi|316910957|gb|EFV32574.1| DNA ligase [Eggerthella sp. 1_3_56FAA] Length = 708 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 25/59 (42%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + HH YY D P +D +D + L L+ PEL D P VG Sbjct: 22 AARIDALRREIEHHSYLYYANDAPEISDAAFDSLMRELRELEAAHPELIDPSSPTQRVG 80 >gi|294504743|ref|YP_003568805.1| DNA ligase [Yersinia pestis Z176003] gi|262362805|gb|ACY59526.1| DNA ligase [Yersinia pestis D106004] gi|262366729|gb|ACY63286.1| DNA ligase [Yersinia pestis D182038] gi|294355202|gb|ADE65543.1| DNA ligase [Yersinia pestis Z176003] Length = 656 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 26/49 (53%) Query: 70 ALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH+ Y+ LD P D YDR+ ++L L+ Q PEL D P VG Sbjct: 1 MRHHEHQYHVLDAPEIPDAEYDRMMQQLRDLEAQHPELVTNDSPTQRVG 49 >gi|257791950|ref|YP_003182556.1| DNA ligase, NAD-dependent [Eggerthella lenta DSM 2243] gi|325829905|ref|ZP_08163363.1| DNA ligase (NAD+) [Eggerthella sp. HGA1] gi|257475847|gb|ACV56167.1| DNA ligase, NAD-dependent [Eggerthella lenta DSM 2243] gi|325488072|gb|EGC90509.1| DNA ligase (NAD+) [Eggerthella sp. HGA1] Length = 708 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 25/59 (42%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + HH YY D P +D +D + L L+ PEL D P VG Sbjct: 22 AARIDALRREIEHHSYLYYANDAPEISDAAFDSLMRELRELEAAHPELIDPSSPTQRVG 80 >gi|46580019|ref|YP_010827.1| DNA ligase, NAD-dependent [Desulfovibrio vulgaris str. Hildenborough] gi|81404693|sp|Q72BM7|DNLJ_DESVH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|46449435|gb|AAS96086.1| DNA ligase, NAD-dependent [Desulfovibrio vulgaris str. Hildenborough] Length = 799 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 27/63 (42%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 EA L H + YY LD P +D YD + L L+ ++P L DE P Sbjct: 36 PEEARQRAAQLRADLERHNRLYYELDTPEISDAEYDALYRELVGLETRWPALRDEASPTQ 95 Query: 116 TVG 118 VG Sbjct: 96 RVG 98 >gi|126726435|ref|ZP_01742276.1| DNA ligase [Rhodobacterales bacterium HTCC2150] gi|126704298|gb|EBA03390.1| DNA ligase [Rhodobacterales bacterium HTCC2150] Length = 705 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 32/70 (45%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K ++ EA E++ L K+ Y+ D P +D YDR+ ++ FP+L Sbjct: 3 KNPLDMTMAEARSELKRLAKVIAAANSSYHTADAPEISDAEYDRLRRLNSEIEAAFPDLK 62 Query: 109 DEDHPWNTVG 118 D P + VG Sbjct: 63 RADSPSDNVG 72 >gi|323705997|ref|ZP_08117567.1| DNA ligase, NAD-dependent [Thermoanaerobacterium xylanolyticum LX-11] gi|323534611|gb|EGB24392.1| DNA ligase, NAD-dependent [Thermoanaerobacterium xylanolyticum LX-11] Length = 659 Score = 98.4 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH YY LD P +D YD + L L+E++P+ D P VG Sbjct: 3 IEDRIKELRDKLNHHSYMYYVLDKPEISDYEYDMMMRELIELEEKYPQFKTPDSPTQRVG 62 >gi|269960659|ref|ZP_06175031.1| DNA ligase [Vibrio harveyi 1DA3] gi|269834736|gb|EEZ88823.1| DNA ligase [Vibrio harveyi 1DA3] Length = 670 Score = 98.0 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +E L + +H YY D+P D YDR+ L ++ + PEL D P Sbjct: 3 ESVLQRLEELKESLHYHAVRYYVEDNPEIPDAEYDRMMRELLDIEAEHPELVTVDSPSQR 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|225377122|ref|ZP_03754343.1| hypothetical protein ROSEINA2194_02767 [Roseburia inulinivorans DSM 16841] gi|225211027|gb|EEG93381.1| hypothetical protein ROSEINA2194_02767 [Roseburia inulinivorans DSM 16841] Length = 668 Score = 98.0 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A + L K +H YY D P +D YD + + L L+++ PEL D P Sbjct: 1 MKKMSAEERIAELKKTLEYHIDRYYNQDSPEISDYEYDMMMQELKNLEKEHPELVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|21231024|ref|NP_636941.1| NAD-dependent DNA ligase LigA [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768971|ref|YP_243733.1| NAD-dependent DNA ligase LigA [Xanthomonas campestris pv. campestris str. 8004] gi|188992085|ref|YP_001904095.1| NAD-dependent DNA ligase LigA [Xanthomonas campestris pv. campestris str. B100] gi|81305065|sp|Q4UTB0|DNLJ_XANC8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|81794799|sp|Q8PAB5|DNLJ_XANCP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254782312|sp|B0RUY2|DNLJ_XANCB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|21112648|gb|AAM40865.1| DNA ligase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574303|gb|AAY49713.1| DNA ligase [Xanthomonas campestris pv. campestris str. 8004] gi|167733845|emb|CAP52051.1| DNA ligase (NAD(+)) [Xanthomonas campestris pv. campestris] Length = 833 Score = 98.0 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 28/60 (46%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ L + Y+ LD+P D YDR+ L+AL+ PEL D P VGY Sbjct: 8 AQRIDALRQRIEDANYRYHVLDEPQIADVEYDRLLRELEALEAAHPELATADSPTQRVGY 67 >gi|296135970|ref|YP_003643212.1| DNA ligase, NAD-dependent [Thiomonas intermedia K12] gi|295796092|gb|ADG30882.1| DNA ligase, NAD-dependent [Thiomonas intermedia K12] Length = 688 Score = 98.0 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 22/62 (35%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + L YY LD PL D YD + L ++ PEL D P Sbjct: 8 AQPAERAAQLRAEIARLDHAYYVLDAPLAPDADYDALFRELQQIEADHPELRTPDSPTQR 67 Query: 117 VG 118 VG Sbjct: 68 VG 69 >gi|313114130|ref|ZP_07799682.1| DNA ligase, NAD-dependent [Faecalibacterium cf. prausnitzii KLE1255] gi|310623539|gb|EFQ06942.1| DNA ligase, NAD-dependent [Faecalibacterium cf. prausnitzii KLE1255] Length = 666 Score = 98.0 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L +A VE L + + + YY D P D YD ++ L L+ QFP+L P Sbjct: 4 LELEQAKKRVEELRAVIEKNNRLYYDQDAPELEDFEYDALTRELKELEAQFPQLVTASSP 63 Query: 114 WNTVG 118 VG Sbjct: 64 TQKVG 68 >gi|312882689|ref|ZP_07742426.1| NAD-dependent DNA ligase LigA [Vibrio caribbenthicus ATCC BAA-2122] gi|309369650|gb|EFP97165.1| NAD-dependent DNA ligase LigA [Vibrio caribbenthicus ATCC BAA-2122] Length = 670 Score = 98.0 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK E ++ +L ++ H YY D+P D YDR+ L L+ Q PEL D P Sbjct: 1 MSK-EIETKLNHLRQLLHSHGIKYYVEDNPQIPDSEYDRLMRELLELESQHPELVSLDSP 59 Query: 114 WNTVG 118 VG Sbjct: 60 TQRVG 64 >gi|229493359|ref|ZP_04387148.1| DNA ligase, NAD-dependent [Rhodococcus erythropolis SK121] gi|229319675|gb|EEN85507.1| DNA ligase, NAD-dependent [Rhodococcus erythropolis SK121] Length = 700 Score = 98.0 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 34/61 (55%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EA + L + HQ YY D P+ +DG +D + +L+AL+EQ+P+L D P V Sbjct: 14 EAREQWTELAEEVRQHQFRYYVRDAPVISDGAFDTLLGQLNALEEQYPDLRTPDSPTQLV 73 Query: 118 G 118 G Sbjct: 74 G 74 >gi|306819948|ref|ZP_07453599.1| NAD-dependent DNA ligase LigA [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551984|gb|EFM39924.1| NAD-dependent DNA ligase LigA [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 675 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 37/64 (57%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S EA +++E L + K YY D+P+ +D YD + +L +L+E++PEL D P Sbjct: 3 SIDEARVKIEELKAEIEKNNKLYYEDDNPVISDYDYDMMMRQLISLEEKYPELKTPDSPS 62 Query: 115 NTVG 118 N VG Sbjct: 63 NRVG 66 >gi|121587330|ref|ZP_01677101.1| DNA ligase [Vibrio cholerae 2740-80] gi|121730035|ref|ZP_01682446.1| DNA ligase [Vibrio cholerae V52] gi|147675693|ref|YP_001216443.1| NAD-dependent DNA ligase LigA [Vibrio cholerae O395] gi|153818602|ref|ZP_01971269.1| DNA ligase [Vibrio cholerae NCTC 8457] gi|227081145|ref|YP_002809696.1| DNA ligase [Vibrio cholerae M66-2] gi|229505430|ref|ZP_04394940.1| DNA ligase [Vibrio cholerae BX 330286] gi|262167192|ref|ZP_06034905.1| DNA ligase [Vibrio cholerae RC27] gi|298498912|ref|ZP_07008719.1| DNA ligase, NAD-dependent [Vibrio cholerae MAK 757] gi|190359299|sp|A5F2W3|DNLJ_VIBC3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781449|sp|C3LTL9|DNLJ_VIBCM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|121548413|gb|EAX58473.1| DNA ligase [Vibrio cholerae 2740-80] gi|121628224|gb|EAX60744.1| DNA ligase [Vibrio cholerae V52] gi|126510828|gb|EAZ73422.1| DNA ligase [Vibrio cholerae NCTC 8457] gi|146317576|gb|ABQ22115.1| DNA ligase [Vibrio cholerae O395] gi|227009033|gb|ACP05245.1| DNA ligase [Vibrio cholerae M66-2] gi|227012788|gb|ACP08998.1| DNA ligase [Vibrio cholerae O395] gi|229357653|gb|EEO22570.1| DNA ligase [Vibrio cholerae BX 330286] gi|262024413|gb|EEY43101.1| DNA ligase [Vibrio cholerae RC27] gi|297543245|gb|EFH79295.1| DNA ligase, NAD-dependent [Vibrio cholerae MAK 757] Length = 669 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + L K H YY D P D YDR+ L L+ PEL D P Sbjct: 2 SDVAQRLTELRKTLHEHGVRYYVEDAPTIPDAEYDRLMRELLELEAAHPELMSSDSPSLR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|118470314|ref|YP_886705.1| NAD-dependent DNA ligase LigA [Mycobacterium smegmatis str. MC2 155] gi|166216211|sp|A0QUW7|DNLJ_MYCS2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|118171601|gb|ABK72497.1| DNA ligase, NAD-dependent [Mycobacterium smegmatis str. MC2 155] Length = 701 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + L HQ YY D P+ +D +D++ L AL++ PEL D P Sbjct: 19 ADERRRWQELADEVREHQFRYYVKDAPIISDAEFDKLLRELQALEDAHPELRTPDSPTQL 78 Query: 117 VG 118 VG Sbjct: 79 VG 80 >gi|292488952|ref|YP_003531839.1| DNA ligase [Erwinia amylovora CFBP1430] gi|292900089|ref|YP_003539458.1| DNA ligase [Erwinia amylovora ATCC 49946] gi|291199937|emb|CBJ47061.1| DNA ligase [Erwinia amylovora ATCC 49946] gi|291554386|emb|CBA21816.1| DNA ligase [Erwinia amylovora CFBP1430] Length = 670 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +L + H++ Y+ LD P D YDR+ L L+ Q+PEL D P VG Sbjct: 7 KITHLRTLLRHYEHQYHVLDAPTVPDAEYDRLMGELRELETQYPELLTSDSPTQRVG 63 >gi|311233982|gb|ADP86836.1| DNA ligase, NAD-dependent [Desulfovibrio vulgaris RCH1] Length = 818 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 27/63 (42%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 EA L H + YY LD P +D YD + L L+ ++P L DE P Sbjct: 55 PEEARQRAAQLRADLERHNRLYYELDTPEISDAEYDALYRELVGLETRWPALRDEASPTQ 114 Query: 116 TVG 118 VG Sbjct: 115 RVG 117 >gi|296451892|ref|ZP_06893609.1| NAD-dependent DNA ligase LigA [Clostridium difficile NAP08] gi|296879713|ref|ZP_06903688.1| NAD-dependent DNA ligase LigA [Clostridium difficile NAP07] gi|296259274|gb|EFH06152.1| NAD-dependent DNA ligase LigA [Clostridium difficile NAP08] gi|296429302|gb|EFH15174.1| NAD-dependent DNA ligase LigA [Clostridium difficile NAP07] Length = 677 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K E+ L++ +H + YY D P +D YD++ + L +L+E+ PEL D P Sbjct: 1 MQKVSIKDEINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSP 60 Query: 114 WNTVG 118 N VG Sbjct: 61 TNRVG 65 >gi|312173113|emb|CBX81368.1| DNA ligase [Erwinia amylovora ATCC BAA-2158] Length = 670 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 30/57 (52%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +L + H++ Y+ LD P D YDR+ L L+ Q+PEL D P VG Sbjct: 7 KITHLRTLLRHYEHQYHVLDAPTVPDAEYDRLMGELRELETQYPELLTSDSPTQRVG 63 >gi|157374877|ref|YP_001473477.1| DNA ligase (NAD(+)) [Shewanella sediminis HAW-EB3] gi|190359288|sp|A8FU26|DNLJ_SHESH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157317251|gb|ABV36349.1| DNA ligase (NAD(+)) [Shewanella sediminis HAW-EB3] Length = 670 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E++ L + H YY D P D YDR+ RL L+ + PEL D P VG Sbjct: 4 IQEEIKQLTSVLNEHNYRYYVDDAPSVPDAEYDRLINRLKQLEAENPELCLPDSPTQRVG 63 >gi|300114089|ref|YP_003760664.1| DNA ligase, NAD-dependent [Nitrosococcus watsonii C-113] gi|299540026|gb|ADJ28343.1| DNA ligase, NAD-dependent [Nitrosococcus watsonii C-113] Length = 675 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 32/63 (50%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 A ++ L ++ ++ YY +D+PL D YDR+ L L+E +PEL D P Sbjct: 4 PAPAKDRIQALKELINNYDYAYYVMDNPLIPDSEYDRLIRELRVLEENYPELITLDSPTQ 63 Query: 116 TVG 118 VG Sbjct: 64 RVG 66 >gi|193213809|ref|YP_001995008.1| NAD-dependentDNA ligase [Chloroherpeton thalassium ATCC 35110] gi|254781288|sp|B3QSH0|DNLJ_CHLT3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|193087286|gb|ACF12561.1| DNA ligase, NAD-dependent [Chloroherpeton thalassium ATCC 35110] Length = 684 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++K EA ++ L + H YY L P +D +D + L L+ ++P+L D P Sbjct: 1 MNKSEAEAKIRALRREINEHNYNYYNLAKPKISDYDFDALLRTLAELEAKYPDLVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|52079149|ref|YP_077940.1| NAD-dependent DNA ligase LigA [Bacillus licheniformis ATCC 14580] gi|52784516|ref|YP_090345.1| NAD-dependent DNA ligase LigA [Bacillus licheniformis ATCC 14580] gi|319647076|ref|ZP_08001302.1| DNA ligase [Bacillus sp. BT1B_CT2] gi|81386291|sp|Q65MR2|DNLJ_BACLD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|52002360|gb|AAU22302.1| DNA ligase [Bacillus licheniformis ATCC 14580] gi|52347018|gb|AAU39652.1| LigA [Bacillus licheniformis ATCC 14580] gi|317390900|gb|EFV71701.1| DNA ligase [Bacillus sp. BT1B_CT2] Length = 667 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A VE L + + Y+ LDDP D YD++ + L AL+E+ P+L D P Sbjct: 1 MEKEAAKRRVEQLHALINKYNYEYHTLDDPSVPDSEYDKLMKELIALEEEHPDLKTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|260684853|ref|YP_003216138.1| DNA ligase [Clostridium difficile CD196] gi|260688511|ref|YP_003219645.1| DNA ligase [Clostridium difficile R20291] gi|260211016|emb|CBA66332.1| DNA ligase [Clostridium difficile CD196] gi|260214528|emb|CBE07046.1| DNA ligase [Clostridium difficile R20291] Length = 677 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K E+ L++ +H + YY D P +D YD++ + L +L+E+ PEL D P Sbjct: 1 MQKVSVKDEINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSP 60 Query: 114 WNTVG 118 N VG Sbjct: 61 TNRVG 65 >gi|237747723|ref|ZP_04578203.1| DNA ligase [Oxalobacter formigenes OXCC13] gi|229379085|gb|EEO29176.1| DNA ligase [Oxalobacter formigenes OXCC13] Length = 685 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + YY LD P+ D YDR+ +L L++ PEL D P VG Sbjct: 16 AEQAARLRSEIERYNIAYYVLDAPIVPDSEYDRLFRQLQELEKAHPELVVPDSPTQRVG 74 >gi|120554094|ref|YP_958445.1| DNA ligase, NAD-dependent [Marinobacter aquaeolei VT8] gi|166215819|sp|A1TZT9|DNLJ_MARAV RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|120323943|gb|ABM18258.1| DNA ligase, NAD-dependent [Marinobacter aquaeolei VT8] Length = 678 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 27/63 (42%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 V+ L H +YY DDP D YDR+ L L+ + PEL ED P Sbjct: 5 PETIRKRVDSLRATLEDHNYYYYVQDDPRIPDAEYDRLFRELQKLEAEHPELATEDSPTR 64 Query: 116 TVG 118 VG Sbjct: 65 RVG 67 >gi|126700928|ref|YP_001089825.1| DNA ligase [Clostridium difficile 630] gi|123362868|sp|Q180F3|DNLJ_CLOD6 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 677 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K E+ L++ +H + YY D P +D YD++ + L +L+E+ PEL D P Sbjct: 1 MQKVSVKDEINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSP 60 Query: 114 WNTVG 118 N VG Sbjct: 61 TNRVG 65 >gi|254508455|ref|ZP_05120575.1| DNA ligase, NAD-dependent [Vibrio parahaemolyticus 16] gi|219548665|gb|EED25670.1| DNA ligase, NAD-dependent [Vibrio parahaemolyticus 16] Length = 669 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L + +H YY D P D YDR+ L L+ Q P L D P Sbjct: 3 QQIQEKLNQLRESLHYHGIKYYVEDAPEIPDAEYDRLMRELIELEAQNPNLISVDSPSQR 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|126668324|ref|ZP_01739283.1| DNA ligase, NAD-dependent [Marinobacter sp. ELB17] gi|126627241|gb|EAZ97879.1| DNA ligase, NAD-dependent [Marinobacter sp. ELB17] Length = 703 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V L H YY LDDP D YDR+ L AL+ ++PEL P VG Sbjct: 8 VRDRVHQLRTTITDHNHHYYVLDDPQVPDAEYDRLFRGLQALEAEYPELATATSPTQRVG 67 >gi|215918993|ref|NP_819574.2| NAD-dependent DNA ligase [Coxiella burnetii RSA 493] gi|218512010|sp|Q83DZ6|DNLJ_COXBU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|206583878|gb|AAO90088.2| NAD-dependent DNA ligase [Coxiella burnetii RSA 493] Length = 673 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + +E L + H YY L P D +YD + L+ L++++PE P Sbjct: 7 PAKIQKRIERLRQEINDHNYRYYVLSQPTIPDSVYDELFHELEKLEKKYPETITPSSPTQ 66 Query: 116 TVG 118 VG Sbjct: 67 RVG 69 >gi|114047080|ref|YP_737630.1| DNA ligase, NAD-dependent [Shewanella sp. MR-7] gi|113888522|gb|ABI42573.1| DNA ligase, NAD-dependent [Shewanella sp. MR-7] Length = 690 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +++ A ++ L + H YY D P TD YDR+ +RL L+ ++P+ D Sbjct: 19 AVTPQNAQPLMQALCQSLNEHNIRYYVDDAPSITDSEYDRLMQRLKQLEAEYPQFVAADS 78 Query: 113 PWNTVG 118 P VG Sbjct: 79 PTQRVG 84 >gi|320334549|ref|YP_004171260.1| DNA ligase [Deinococcus maricopensis DSM 21211] gi|319755838|gb|ADV67595.1| DNA ligase [Deinococcus maricopensis DSM 21211] Length = 671 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 24/59 (40%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L++ HH + YY D P +D YD + L A + PE + P VG Sbjct: 3 EARYRELIQTIQHHNRLYYEQDTPEISDAEYDALMRELRAAEAAHPEWITPESPTQKVG 61 >gi|167624496|ref|YP_001674790.1| DNA ligase, NAD-dependent [Shewanella halifaxensis HAW-EB4] gi|190359286|sp|B0TKB2|DNLJ_SHEHH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|167354518|gb|ABZ77131.1| DNA ligase, NAD-dependent [Shewanella halifaxensis HAW-EB4] Length = 667 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L H YY D P D YDR+ RL AL+ + P+ D P VG Sbjct: 4 IQTEIAQLTAELNQHNYRYYVDDSPSIPDSEYDRLLNRLKALETEHPQFCLADSPTQRVG 63 >gi|166216288|sp|Q0HWD2|DNLJ_SHESR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 688 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +++ A ++ L + H YY D P TD YDR+ +RL L+ ++P+ D Sbjct: 17 AVTPQNAQPLMQALCQSLNEHNIRYYVDDAPSITDSEYDRLMQRLKQLEAEYPQFVAADS 76 Query: 113 PWNTVG 118 P VG Sbjct: 77 PTQRVG 82 >gi|159036755|ref|YP_001536008.1| DNA ligase, NAD-dependent [Salinispora arenicola CNS-205] gi|190359280|sp|A8M5E3|DNLJ_SALAI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157915590|gb|ABV97017.1| DNA ligase, NAD-dependent [Salinispora arenicola CNS-205] Length = 710 Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A L HQ YY LD P +D +D L AL+ +FP L D P VG Sbjct: 25 ARERHATLSLELTEHQYRYYVLDAPTISDAEFDERLRELAALEAEFPALRTPDSPTQRVG 84 >gi|212212963|ref|YP_002303899.1| NAD-dependent DNA ligase [Coxiella burnetii CbuG_Q212] gi|254781302|sp|B6J1C6|DNLJ_COXB2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|212011373|gb|ACJ18754.1| NAD-dependent DNA ligase [Coxiella burnetii CbuG_Q212] Length = 677 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + +E L + H YY L P D +YD + L L++++PE P Sbjct: 7 PAKIQKRIERLRQEINDHNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQ 66 Query: 116 TVG 118 VG Sbjct: 67 RVG 69 >gi|167770441|ref|ZP_02442494.1| hypothetical protein ANACOL_01786 [Anaerotruncus colihominis DSM 17241] gi|167667036|gb|EDS11166.1| hypothetical protein ANACOL_01786 [Anaerotruncus colihominis DSM 17241] Length = 664 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 29/64 (45%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 A V+ L + H YY LD P +D YDR+ L L+E FPEL + P Sbjct: 6 DLESAKRRVQELRTVIEKHNHSYYVLDRPTVSDYEYDRLLHELIDLEEAFPELASDHSPT 65 Query: 115 NTVG 118 VG Sbjct: 66 RRVG 69 >gi|118465270|ref|YP_883031.1| NAD-dependent DNA ligase LigA [Mycobacterium avium 104] gi|166215821|sp|A0QJE3|DNLJ_MYCA1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|118166557|gb|ABK67454.1| DNA ligase, NAD-dependent [Mycobacterium avium 104] Length = 693 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 30/63 (47%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 E + + L + HQ YY D P+ +D +D + L AL+E+ PEL D P Sbjct: 10 PPEVRRQWQELAETVREHQFRYYIKDAPIISDAEFDALFNELLALEERHPELRVADSPTQ 69 Query: 116 TVG 118 VG Sbjct: 70 LVG 72 >gi|294340191|emb|CAZ88563.1| DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) [Thiomonas sp. 3As] Length = 686 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 22/62 (35%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + L YY LD PL D YD + L ++ PEL D P Sbjct: 8 AQPAERATQLRAEIARLDHAYYVLDAPLAPDADYDALFRELQQIEADHPELRTPDSPTQR 67 Query: 117 VG 118 VG Sbjct: 68 VG 69 >gi|257454409|ref|ZP_05619671.1| DNA ligase, NAD-dependent [Enhydrobacter aerosaccus SK60] gi|257448175|gb|EEV23156.1| DNA ligase, NAD-dependent [Enhydrobacter aerosaccus SK60] Length = 675 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ ++ L+ H YY LD+PL D YD++ + L AL+ +P+L D P Sbjct: 3 MNTAAITAQMRKLIAQLKQHNHAYYVLDNPLLEDSEYDQLRQELVALETAYPQLVQSDSP 62 Query: 114 WNTVG 118 N VG Sbjct: 63 TNQVG 67 >gi|310768269|gb|ADP13219.1| NAD-dependent DNA ligase LigA [Erwinia sp. Ejp617] Length = 670 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 29/62 (46%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ +L + H++ Y+ LD P D YDR+ L L+ Q PEL D P Sbjct: 2 ESVQDKITHLRTLLRHYEYQYHVLDAPAVPDAEYDRLMGELRELEAQHPELLTSDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|110679832|ref|YP_682839.1| DNA ligase, NAD-dependent [Roseobacter denitrificans OCh 114] gi|123172419|sp|Q166E0|DNLJ_ROSDO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|109455948|gb|ABG32153.1| DNA ligase, NAD-dependent [Roseobacter denitrificans OCh 114] Length = 705 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 33/72 (45%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 + SL++ A E+ L + Y+ D P+ +D +D R A++E+FP Sbjct: 2 DFAPLDSLTEKAAKKELSKLADLLDQANTAYHANDAPIISDADFDAYKRRNLAIEERFPH 61 Query: 107 LFDEDHPWNTVG 118 L D P + VG Sbjct: 62 LKRADSPTDRVG 73 >gi|256847801|ref|ZP_05553246.1| DNA ligase, NAD-dependent [Lactobacillus coleohominis 101-4-CHN] gi|256715490|gb|EEU30466.1| DNA ligase, NAD-dependent [Lactobacillus coleohominis 101-4-CHN] Length = 674 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 34/67 (50%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ EA E+ L + + K YY D+P D +YDR +RL L+ +FPEL D Sbjct: 4 EQITLAEAKKEIGPLRQQLIQWGKEYYEQDNPSVEDYVYDRQYQRLVELEARFPELVTPD 63 Query: 112 HPWNTVG 118 P VG Sbjct: 64 SPTQRVG 70 >gi|254489942|ref|ZP_05103137.1| DNA ligase, NAD-dependent [Methylophaga thiooxidans DMS010] gi|224465027|gb|EEF81281.1| DNA ligase, NAD-dependent [Methylophaga thiooxydans DMS010] Length = 673 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 27/61 (44%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E L ++ H+ YY D+P D YDR+ L L++ PEL D P V Sbjct: 6 EVQQRAATLRELINHYNYLYYVTDNPEVPDAEYDRLFSELQQLEQTHPELLTADSPTQRV 65 Query: 118 G 118 G Sbjct: 66 G 66 >gi|145593768|ref|YP_001158065.1| DNA ligase, NAD-dependent [Salinispora tropica CNB-440] gi|190359283|sp|A4X487|DNLJ_SALTO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145303105|gb|ABP53687.1| DNA ligase, NAD-dependent [Salinispora tropica CNB-440] Length = 711 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A L + HQ YY LD P +D +D L AL+ +FP L D P VG Sbjct: 26 ARERHATLSRELTEHQYRYYVLDAPTISDAAFDEQLRELAALEAEFPALRTPDSPTQRVG 85 >gi|311104688|ref|YP_003977541.1| DNA ligase, NAD-dependent [Achromobacter xylosoxidans A8] gi|310759377|gb|ADP14826.1| DNA ligase, NAD-dependent [Achromobacter xylosoxidans A8] Length = 702 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 23/50 (46%) Query: 69 IALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY D+P +D YD + L AL+ + PEL + P VG Sbjct: 20 EIEQHNVRYYVYDEPSISDAEYDGLMRELQALEAEHPELVTPESPTQRVG 69 >gi|209364099|ref|YP_001424866.2| NAD-dependent DNA ligase [Coxiella burnetii Dugway 5J108-111] gi|207082032|gb|ABS76887.2| NAD-dependent DNA ligase [Coxiella burnetii Dugway 5J108-111] Length = 673 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + +E L + H YY L P D +YD + L L++++PE P Sbjct: 7 PAKIQKRIERLRQEINDHNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQ 66 Query: 116 TVG 118 VG Sbjct: 67 RVG 69 >gi|28199807|ref|NP_780121.1| NAD-dependent DNA ligase LigA [Xylella fastidiosa Temecula1] gi|182682559|ref|YP_001830719.1| NAD-dependent DNA ligase LigA [Xylella fastidiosa M23] gi|81438262|sp|Q87A88|DNLJ_XYLFT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254782314|sp|B2I9S4|DNLJ_XYLF2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|28057928|gb|AAO29770.1| DNA ligase [Xylella fastidiosa Temecula1] gi|182632669|gb|ACB93445.1| DNA ligase, NAD-dependent [Xylella fastidiosa M23] gi|307578838|gb|ADN62807.1| NAD-dependent DNA ligase LigA [Xylella fastidiosa subsp. fastidiosa GB514] Length = 831 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L + E+ ++ A +H Y+ LD P D YDR+ LDAL+ +P+L D P Sbjct: 4 LDPAQRAAELRRRLQEANYH---YHVLDQPRIPDADYDRMLRELDALEATYPDLATPDSP 60 Query: 114 WNTVGY 119 VG+ Sbjct: 61 TQRVGH 66 >gi|163802586|ref|ZP_02196478.1| NAD-dependent DNA ligase LigA [Vibrio sp. AND4] gi|159173669|gb|EDP58488.1| NAD-dependent DNA ligase LigA [Vibrio sp. AND4] Length = 670 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++E L + +H YY D+P D YDR+ L ++ + P+L D P Sbjct: 3 ESVLQQLEELKESLHYHAVRYYVEDNPEIPDAEYDRMMRELLDIEAEHPDLVTVDSPSQR 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|160945211|ref|ZP_02092437.1| hypothetical protein FAEPRAM212_02730 [Faecalibacterium prausnitzii M21/2] gi|158442942|gb|EDP19947.1| hypothetical protein FAEPRAM212_02730 [Faecalibacterium prausnitzii M21/2] Length = 671 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L +A V+ L I + + YY D P D YD ++ L L+ QFP+L P Sbjct: 4 LELEQAKKRVKELRAIIEKNNRLYYDQDAPELEDFEYDALTRELKELEAQFPQLVTAASP 63 Query: 114 WNTVG 118 VG Sbjct: 64 TQKVG 68 >gi|262165212|ref|ZP_06032949.1| DNA ligase [Vibrio mimicus VM223] gi|262024928|gb|EEY43596.1| DNA ligase [Vibrio mimicus VM223] Length = 682 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 24/67 (35%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + + L + H YY D P D YDR+ L L+ PEL D Sbjct: 9 ERFTMSNVEQRLIELRQTLHEHGVRYYVEDAPTIPDAEYDRLMRELLDLEAANPELITPD 68 Query: 112 HPWNTVG 118 P VG Sbjct: 69 SPSLRVG 75 >gi|71898271|ref|ZP_00680445.1| NAD-dependent DNA ligase [Xylella fastidiosa Ann-1] gi|71732010|gb|EAO34067.1| NAD-dependent DNA ligase [Xylella fastidiosa Ann-1] Length = 831 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L + E+ ++ A +H Y+ LD P D YDR+ LDAL+ +P+L D P Sbjct: 4 LDPAQRAAELRRRLQEANYH---YHVLDQPRIPDADYDRMLRELDALEATYPDLATPDSP 60 Query: 114 WNTVGY 119 VG+ Sbjct: 61 TQRVGH 66 >gi|332038149|gb|EGI74596.1| DNA ligase [Pseudoalteromonas haloplanktis ANT/505] Length = 672 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 26/58 (44%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +L H YY LD P D YDR+ L AL+ Q PE D P VG Sbjct: 7 EQINHLRTTLEQHNYNYYVLDTPSIPDSEYDRLLRELSALEMQHPEFLTADSPTQKVG 64 >gi|329121050|ref|ZP_08249681.1| NAD-dependent DNA ligase LigA [Dialister micraerophilus DSM 19965] gi|327471212|gb|EGF16666.1| NAD-dependent DNA ligase LigA [Dialister micraerophilus DSM 19965] Length = 666 Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + E + +V+ L + +H YY LD P +D +D++ L + ++PEL +D P Sbjct: 1 MITNEIISKVKKLREELRYHSYLYYVLDKPEISDFEFDKMYRELVDFESKYPELITQDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|190359248|sp|A9KCS0|DNLJ_COXBN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 670 Score = 97.6 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + +E L + H YY L P D +YD + L L++++PE P Sbjct: 4 PAKIQKRIERLRQEINDHNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQ 63 Query: 116 TVG 118 VG Sbjct: 64 RVG 66 >gi|91775756|ref|YP_545512.1| DNA ligase, NAD-dependent [Methylobacillus flagellatus KT] gi|123254532|sp|Q1H1G6|DNLJ_METFK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|91709743|gb|ABE49671.1| DNA ligase, NAD-dependent [Methylobacillus flagellatus KT] Length = 693 Score = 97.6 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +VE L + YY L+ P D YDRV L AL++ PEL D P VG Sbjct: 18 AEKVEALRATIRRYDYEYYVLNAPSVPDSEYDRVFRELKALEDAHPELVTPDSPTQRVG 76 >gi|11967289|gb|AAG42042.1| NAD-dependent DNA ligase [Aquifex pyrophilus] Length = 719 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 3/87 (3%) Query: 31 EAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLY 90 E + + R L L++ K + LS EA E L ++ H YY P+ +D Y Sbjct: 7 ERELIEKTREL---LERIKSLKDLSLEEAKRLAEELKEVIRFHDYKYYVQASPVISDYDY 63 Query: 91 DRVSERLDALQEQFPELFDEDHPWNTV 117 DR+ L ++ +FP+ D P V Sbjct: 64 DRLFRALKEIERKFPQFITPDSPTQRV 90 >gi|150397271|ref|YP_001327738.1| NAD-dependent DNA ligase LigA [Sinorhizobium medicae WSM419] gi|166216245|sp|A6UB73|DNLJ_SINMW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|150028786|gb|ABR60903.1| DNA ligase, NAD-dependent [Sinorhizobium medicae WSM419] Length = 717 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 39/74 (52%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 L++ K V +++ EA E+ +L H Y+ DDP +D YD + R D ++E+F Sbjct: 2 LNQRKPVEQMTEAEAAEELAFLAAELSRHDMLYHGKDDPEISDADYDALKRRNDLIEERF 61 Query: 105 PELFDEDHPWNTVG 118 P L ED P VG Sbjct: 62 PALIREDSPSQKVG 75 >gi|6573451|pdb|1B04|A Chain A, Structure Of The Adenylation Domain Of An Nad+ Dependent Ligase gi|6573452|pdb|1B04|B Chain B, Structure Of The Adenylation Domain Of An Nad+ Dependent Ligase Length = 318 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A L ++ + YY LD P D YDR+ + L A++EQ+PEL D P Sbjct: 1 MDRQQAERRAAELRELLNRYGYEYYVLDRPSVPDAEYDRLMQELIAIEEQYPELKTSDSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 TQRIG 65 >gi|71899829|ref|ZP_00681979.1| NAD-dependent DNA ligase [Xylella fastidiosa Ann-1] gi|254782317|sp|B0U5G7|DNLJ_XYLFM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|71730420|gb|EAO32501.1| NAD-dependent DNA ligase [Xylella fastidiosa Ann-1] Length = 831 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L + E+ ++ A +H Y+ LD P D YDR+ LDAL+ +P+L D P Sbjct: 4 LDPAQRAAELRRRLQEANYH---YHVLDQPRIPDADYDRMLRELDALEATYPDLATPDSP 60 Query: 114 WNTVGY 119 VG+ Sbjct: 61 TQRVGH 66 >gi|107028796|ref|YP_625891.1| DNA ligase, NAD-dependent [Burkholderia cenocepacia AU 1054] gi|105897960|gb|ABF80918.1| DNA ligase, NAD-dependent [Burkholderia cenocepacia AU 1054] Length = 746 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 7/74 (9%) Query: 52 TSLSKGEAM-------IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S+++ +A +L YY LD P D YDR+ L L+ Sbjct: 54 ASMARTQAEPPASQPDARAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFRELQQLETDH 113 Query: 105 PELFDEDHPWNTVG 118 PEL D P VG Sbjct: 114 PELVTPDSPTQRVG 127 >gi|229523238|ref|ZP_04412645.1| DNA ligase [Vibrio cholerae TM 11079-80] gi|229339601|gb|EEO04616.1| DNA ligase [Vibrio cholerae TM 11079-80] Length = 669 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + L K H YY D P D YDR+ L L+ PEL D P Sbjct: 2 SDVAQRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|71275191|ref|ZP_00651478.1| NAD-dependent DNA ligase [Xylella fastidiosa Dixon] gi|170731182|ref|YP_001776615.1| NAD-dependent DNA ligase LigA [Xylella fastidiosa M12] gi|71164000|gb|EAO13715.1| NAD-dependent DNA ligase [Xylella fastidiosa Dixon] gi|167965975|gb|ACA12985.1| DNA ligase (NAD(+)) [Xylella fastidiosa M12] Length = 837 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L + E+ ++ A +H Y+ LD P D YDR+ LDAL+ +P+L D P Sbjct: 10 LDPAQRAAELRRRLQEANYH---YHVLDQPRIPDADYDRMLRELDALEATYPDLATPDSP 66 Query: 114 WNTVGY 119 VG+ Sbjct: 67 TQRVGH 72 >gi|323341293|ref|ZP_08081538.1| NAD-dependent DNA ligase LigA [Lactobacillus ruminis ATCC 25644] gi|323091287|gb|EFZ33914.1| NAD-dependent DNA ligase LigA [Lactobacillus ruminis ATCC 25644] Length = 671 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 34/65 (52%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K EA E+E L + + YY LD P D +YD +RL L+ +FPEL +D P Sbjct: 1 MDKEEAKKELESLREKLTKWSREYYVLDAPTVEDHVYDENYKRLLELEAKFPELVTKDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|165923886|ref|ZP_02219718.1| DNA ligase, NAD-dependent [Coxiella burnetii RSA 334] gi|165916671|gb|EDR35275.1| DNA ligase, NAD-dependent [Coxiella burnetii RSA 334] Length = 670 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + +E L + H YY L P D +YD + L L++++PE P Sbjct: 4 PAKIQKRIERLRQEINDHNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQ 63 Query: 116 TVG 118 VG Sbjct: 64 RVG 66 >gi|153826197|ref|ZP_01978864.1| DNA ligase [Vibrio cholerae MZO-2] gi|149740057|gb|EDM54226.1| DNA ligase [Vibrio cholerae MZO-2] Length = 669 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + L K H YY D P D YDR+ L L+ PEL D P Sbjct: 2 SDVAQRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|229529935|ref|ZP_04419325.1| DNA ligase [Vibrio cholerae 12129(1)] gi|229333709|gb|EEN99195.1| DNA ligase [Vibrio cholerae 12129(1)] gi|327483693|gb|AEA78100.1| DNA ligase [Vibrio cholerae LMA3894-4] Length = 669 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + L K H YY D P D YDR+ L L+ PEL D P Sbjct: 2 SDVAQRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|307152955|ref|YP_003888339.1| NAD-dependent DNA ligase [Cyanothece sp. PCC 7822] gi|306983183|gb|ADN15064.1| DNA ligase, NAD-dependent [Cyanothece sp. PCC 7822] Length = 682 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 30/61 (49%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E VE L YY LD+P+ D +YD++ L+ L+ Q+PEL D P V Sbjct: 7 EIQQRVEQLRSELQKASYAYYVLDNPIMEDAVYDQLYRELENLETQYPELITPDSPTQRV 66 Query: 118 G 118 G Sbjct: 67 G 67 >gi|330445331|ref|ZP_08308983.1| DNA ligase, NAD-dependent [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489522|dbj|GAA03480.1| DNA ligase, NAD-dependent [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 671 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L + +H YY D+P D YDR+ ++L ++ + PE D P VG Sbjct: 6 QQELFTLREQLDYHGHRYYVEDNPEIPDAEYDRMMQQLLKIEAEHPEWVTVDSPSQRVG 64 >gi|183179445|ref|ZP_02957656.1| DNA ligase [Vibrio cholerae MZO-3] gi|183012856|gb|EDT88156.1| DNA ligase [Vibrio cholerae MZO-3] Length = 669 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + L K H YY D P D YDR+ L L+ PEL D P Sbjct: 2 SDVAQRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|254226208|ref|ZP_04919802.1| DNA ligase [Vibrio cholerae V51] gi|125621244|gb|EAZ49584.1| DNA ligase [Vibrio cholerae V51] Length = 669 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + L K H YY D P D YDR+ L L+ PEL D P Sbjct: 2 SDVAQRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|15640987|ref|NP_230618.1| NAD-dependent DNA ligase LigA [Vibrio cholerae O1 biovar El Tor str. N16961] gi|153822692|ref|ZP_01975359.1| DNA ligase [Vibrio cholerae B33] gi|229510900|ref|ZP_04400379.1| DNA ligase [Vibrio cholerae B33] gi|229518021|ref|ZP_04407465.1| DNA ligase [Vibrio cholerae RC9] gi|229608449|ref|YP_002879097.1| NAD-dependent DNA ligase LigA [Vibrio cholerae MJ-1236] gi|254291846|ref|ZP_04962629.1| DNA ligase [Vibrio cholerae AM-19226] gi|254848101|ref|ZP_05237451.1| NAD-dependent DNA ligase LigA [Vibrio cholerae MO10] gi|255744753|ref|ZP_05418704.1| DNA ligase [Vibrio cholera CIRS 101] gi|262151242|ref|ZP_06028378.1| DNA ligase [Vibrio cholerae INDRE 91/1] gi|81545212|sp|Q9KTD1|DNLJ_VIBCH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|9655431|gb|AAF94133.1| DNA ligase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|126519773|gb|EAZ76996.1| DNA ligase [Vibrio cholerae B33] gi|150422206|gb|EDN14170.1| DNA ligase [Vibrio cholerae AM-19226] gi|229344736|gb|EEO09710.1| DNA ligase [Vibrio cholerae RC9] gi|229350865|gb|EEO15806.1| DNA ligase [Vibrio cholerae B33] gi|229371104|gb|ACQ61527.1| DNA ligase [Vibrio cholerae MJ-1236] gi|254843806|gb|EET22220.1| NAD-dependent DNA ligase LigA [Vibrio cholerae MO10] gi|255737784|gb|EET93178.1| DNA ligase [Vibrio cholera CIRS 101] gi|262030933|gb|EEY49561.1| DNA ligase [Vibrio cholerae INDRE 91/1] Length = 669 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + L K H YY D P D YDR+ L L+ PEL D P Sbjct: 2 SDVAQRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|239906999|ref|YP_002953740.1| NAD-dependent DNA ligase [Desulfovibrio magneticus RS-1] gi|239796865|dbj|BAH75854.1| NAD-dependent DNA ligase [Desulfovibrio magneticus RS-1] Length = 704 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + YY LDDP D YD + L AL+E PEL D + P VG Sbjct: 10 AARLRELRDLIHEYDYRYYVLDDPTVEDAAYDALYRELKALEEAHPELADPNSPTRRVG 68 >gi|209527955|ref|ZP_03276440.1| DNA ligase, NAD-dependent [Arthrospira maxima CS-328] gi|209491614|gb|EDZ91984.1| DNA ligase, NAD-dependent [Arthrospira maxima CS-328] Length = 680 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E ++E L YY LD P DG+YDR+ L L+ Q+PEL D P V Sbjct: 12 EISQKLEQLRLTVQRASYAYYVLDAPTMEDGVYDRLYRELQELETQYPELISPDSPTQRV 71 Query: 118 G 118 G Sbjct: 72 G 72 >gi|189347498|ref|YP_001944027.1| DNA ligase, NAD-dependent [Chlorobium limicola DSM 245] gi|254781283|sp|B3EFT6|DNLJ_CHLL2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|189341645|gb|ACD91048.1| DNA ligase, NAD-dependent [Chlorobium limicola DSM 245] Length = 673 Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + A E+ L K H YY +P+ +D +DR+ E+L AL+ P+L D P Sbjct: 1 MDRAMAADEIARLRKEIERHNYLYYVEAEPVISDYEFDRLLEQLIALERLHPDLVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SLRVG 65 >gi|152981161|ref|YP_001353755.1| DNA ligase (polydeoxyribonucleotide synthase) [Janthinobacterium sp. Marseille] gi|166215814|sp|A6SZQ8|DNLJ_JANMA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|151281238|gb|ABR89648.1| DNA ligase (Polydeoxyribonucleotide synthase) [Janthinobacterium sp. Marseille] Length = 692 Score = 97.2 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 25/59 (42%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L H Y+ LD+P D YD++ L AL+ PEL D P VG Sbjct: 27 AARAAWLRDELNRHNYSYHVLDNPSIPDAEYDKLFRELQALETSHPELLVFDSPTQRVG 85 >gi|294661389|ref|YP_003573265.1| hypothetical protein Aasi_1926 [Candidatus Amoebophilus asiaticus 5a2] gi|254781251|sp|C3L496|DNLJ_AMOA5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|227336540|gb|ACP21137.1| hypothetical protein Aasi_1926 [Candidatus Amoebophilus asiaticus 5a2] Length = 671 Score = 97.2 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 36/65 (55%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K +A E++ L + +H K YY P +D +D++ E+L AL+ QFP+L + P Sbjct: 1 MDKEQARKEIKRLTALVAYHNKLYYEEAQPEISDYEFDQLLEKLIALENQFPDLRLPNSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|82523924|emb|CAI78646.1| NAD-dependent DNA ligase [uncultured delta proteobacterium] Length = 670 Score = 97.2 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + A + L +I +H K YY+ D P +D YD + L L+ QFP+ P Sbjct: 2 MDNNSAHKRIIELRQIIEYHNKRYYQQDAPEISDAEYDLLMRELHNLEAQFPDDELASSP 61 Query: 114 WNTVG 118 VG Sbjct: 62 TQRVG 66 >gi|81373659|sp|Q5YRS7|DNLJ2_NOCFA RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 2 gi|54017744|dbj|BAD59114.1| putative DNA ligase [Nocardia farcinica IFM 10152] Length = 683 Score = 97.2 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 29/58 (50%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + + L + HQ YY D P+ +DG +D + L L+++ P+L D P VG Sbjct: 1 MRWQRLAEEVREHQFRYYVRDAPIISDGEFDALLRELQELEDRHPDLRTPDSPTQLVG 58 >gi|319941620|ref|ZP_08015944.1| DNA ligase [Sutterella wadsworthensis 3_1_45B] gi|319804850|gb|EFW01704.1| DNA ligase [Sutterella wadsworthensis 3_1_45B] Length = 745 Score = 97.2 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 29/69 (42%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 +LS +A + L YY LD+P D YDR L AL+ +FPEL Sbjct: 48 DAAALSPDQAPARMHQLETELERWNYEYYVLDEPSVPDAEYDRAFNELKALEARFPELKS 107 Query: 110 EDHPWNTVG 118 P VG Sbjct: 108 RTSPTLRVG 116 >gi|212218835|ref|YP_002305622.1| NAD-dependent DNA ligase [Coxiella burnetii CbuK_Q154] gi|254781301|sp|B6J878|DNLJ_COXB1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|212013097|gb|ACJ20477.1| NAD-dependent DNA ligase [Coxiella burnetii CbuK_Q154] Length = 673 Score = 97.2 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + +E L + H YY L P D +YD + L L++++PE P Sbjct: 7 PAKIQKRIERLREEINDHNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQ 66 Query: 116 TVG 118 VG Sbjct: 67 RVG 69 >gi|261366975|ref|ZP_05979858.1| DNA ligase, NAD-dependent [Subdoligranulum variabile DSM 15176] gi|282571093|gb|EFB76628.1| DNA ligase, NAD-dependent [Subdoligranulum variabile DSM 15176] Length = 661 Score = 97.2 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A E L + + + YY D P D YD ++ L A++ +FP+L + P Sbjct: 1 MEREQAQKRAEELRAVIEKNNRLYYDQDAPELEDFEYDALTRELKAIETEFPDLVTPESP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQHVG 65 >gi|189425977|ref|YP_001953154.1| DNA ligase, NAD-dependent [Geobacter lovleyi SZ] gi|254781338|sp|B3E8F8|DNLJ_GEOLS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|189422236|gb|ACD96634.1| DNA ligase, NAD-dependent [Geobacter lovleyi SZ] Length = 683 Score = 97.2 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L ++ HH + YY LD P +D YD + L ++ P+L D P VG Sbjct: 16 AQLRAAELRRLLEHHNRCYYELDSPEISDAEYDALFRELQVIEAARPDLLTPDSPTLRVG 75 >gi|323140467|ref|ZP_08075395.1| DNA ligase (NAD+) [Phascolarctobacterium sp. YIT 12067] gi|322415035|gb|EFY05826.1| DNA ligase (NAD+) [Phascolarctobacterium sp. YIT 12067] Length = 679 Score = 97.2 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 30/58 (51%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E + L + H++ YY LD P TD YDR+ RL L+ ++P+ D P VG Sbjct: 16 AEADKLRREIRHNEYLYYVLDAPEITDAEYDRMMVRLRELEARYPDSIPADSPTQRVG 73 >gi|307326508|ref|ZP_07605703.1| DNA ligase, NAD-dependent [Streptomyces violaceusniger Tu 4113] gi|306887916|gb|EFN18907.1| DNA ligase, NAD-dependent [Streptomyces violaceusniger Tu 4113] Length = 732 Score = 97.2 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 E L + H+ YY D P+ +D +D++ L+AL+E+ P L D P Sbjct: 10 PAEVRERHARLAEQIEEHRFRYYVKDAPVVSDAEFDKLMRELEALEEETPALRTPDSPTQ 69 Query: 116 TV 117 V Sbjct: 70 KV 71 >gi|116494557|ref|YP_806291.1| NAD-dependent DNA ligase [Lactobacillus casei ATCC 334] gi|122264017|sp|Q03AC3|DNLJ_LACC3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116104707|gb|ABJ69849.1| NAD-dependent DNA ligase [Lactobacillus casei ATCC 334] Length = 674 Score = 97.2 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 33/71 (46%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 AK + EA EVE L K + YY D P TD +YD L AL+E +P+L Sbjct: 3 AKPAAQFTLEEAQAEVEKLRKQLNQWRLEYYTKDAPTVTDNVYDDHYRDLQALEEAYPKL 62 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 63 VTPDSPTQEVG 73 >gi|226941791|ref|YP_002796865.1| DnlJ [Laribacter hongkongensis HLHK9] gi|254781355|sp|C1D4R5|DNLJ_LARHH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|226716718|gb|ACO75856.1| DnlJ [Laribacter hongkongensis HLHK9] Length = 692 Score = 97.2 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 27/65 (41%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ L + + YY LD P D YDR+ L+AL+ PEL D P Sbjct: 1 MTDLNPTARAAGLRALLHRYNHEYYVLDAPSVPDAEYDRLFRELEALEAAHPELASADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TRRVG 65 >gi|113969850|ref|YP_733643.1| DNA ligase, NAD-dependent [Shewanella sp. MR-4] gi|113884534|gb|ABI38586.1| DNA ligase, NAD-dependent [Shewanella sp. MR-4] Length = 690 Score = 97.2 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +++ A ++ L + H YY D P TD YDR+ +RL L+ ++P+ D Sbjct: 19 AVTPHNAQPLMQALCQSLNEHNIRYYVDDAPSITDSEYDRLMQRLKQLEAEYPQFVAADS 78 Query: 113 PWNTVG 118 P VG Sbjct: 79 PTQRVG 84 >gi|229525582|ref|ZP_04414987.1| DNA ligase [Vibrio cholerae bv. albensis VL426] gi|229339163|gb|EEO04180.1| DNA ligase [Vibrio cholerae bv. albensis VL426] Length = 669 Score = 96.9 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L +I H YY D P D YDR+ L L+ PEL D P VG Sbjct: 4 VEQKLTELRQILHEHGVRYYVEDAPTIPDAEYDRLMRELLELEAAHPELMSSDSPSLRVG 63 >gi|117920017|ref|YP_869209.1| DNA ligase, NAD-dependent [Shewanella sp. ANA-3] gi|117612349|gb|ABK47803.1| DNA ligase, NAD-dependent [Shewanella sp. ANA-3] Length = 691 Score = 96.9 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +++ A ++ L + H YY D P TD YDR+ +RL L+ ++P+ D Sbjct: 19 AVTPHNAQPIMQALCQSLNEHNIRYYVDDAPSITDSEYDRLMQRLKQLEAEYPQFVAADS 78 Query: 113 PWNTVG 118 P VG Sbjct: 79 PTQRVG 84 >gi|166216286|sp|A0KVI4|DNLJ_SHESA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 689 Score = 96.9 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +++ A ++ L + H YY D P TD YDR+ +RL L+ ++P+ D Sbjct: 17 AVTPHNAQPIMQALCQSLNEHNIRYYVDDAPSITDSEYDRLMQRLKQLEAEYPQFVAADS 76 Query: 113 PWNTVG 118 P VG Sbjct: 77 PTQRVG 82 >gi|166216287|sp|Q0HK31|DNLJ_SHESM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 688 Score = 96.9 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +++ A ++ L + H YY D P TD YDR+ +RL L+ ++P+ D Sbjct: 17 AVTPHNAQPLMQALCQSLNEHNIRYYVDDAPSITDSEYDRLMQRLKQLEAEYPQFVAADS 76 Query: 113 PWNTVG 118 P VG Sbjct: 77 PTQRVG 82 >gi|153207803|ref|ZP_01946403.1| DNA ligase, NAD-dependent [Coxiella burnetii 'MSU Goat Q177'] gi|120576355|gb|EAX32979.1| DNA ligase, NAD-dependent [Coxiella burnetii 'MSU Goat Q177'] Length = 670 Score = 96.9 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + +E L + H YY L P D +YD + L L++++PE P Sbjct: 4 PAKIQKRIERLREEINDHNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQ 63 Query: 116 TVG 118 VG Sbjct: 64 RVG 66 >gi|297578580|ref|ZP_06940508.1| DNA ligase [Vibrio cholerae RC385] gi|297536174|gb|EFH75007.1| DNA ligase [Vibrio cholerae RC385] Length = 669 Score = 96.9 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L +I H YY D P D YDR+ L L+ PEL D P VG Sbjct: 4 VEQKLTELRQILHEHGVRYYVEDAPTIPDAEYDRLMRELLELEAAHPELMSSDSPSLRVG 63 >gi|301066103|ref|YP_003788126.1| NAD-dependent DNA ligase [Lactobacillus casei str. Zhang] gi|300438510|gb|ADK18276.1| NAD-dependent DNA ligase [Lactobacillus casei str. Zhang] Length = 674 Score = 96.9 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 33/71 (46%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 AK + EA EVE L K + YY D P TD +YD L AL+E +P+L Sbjct: 3 AKPAAQFTLEEAQAEVEKLRKQLNQWRLEYYTKDAPTVTDNVYDDHYRDLQALEEAYPKL 62 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 63 VTPDSPTQEVG 73 >gi|239631844|ref|ZP_04674875.1| NAD-dependent DNA ligase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526309|gb|EEQ65310.1| NAD-dependent DNA ligase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 674 Score = 96.9 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 33/71 (46%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 AK + EA EVE L K + YY D P TD +YD L AL+E +P+L Sbjct: 3 AKPAAQFTLEEAQAEVEKLRKQLNQWRLEYYTKDAPTVTDNVYDDHYRDLQALEEAYPKL 62 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 63 VTPDSPTQEVG 73 >gi|160899029|ref|YP_001564611.1| NAD-dependent DNA ligase [Delftia acidovorans SPH-1] gi|254781308|sp|A9BZW4|DNLJ_DELAS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|160364613|gb|ABX36226.1| DNA ligase, NAD-dependent [Delftia acidovorans SPH-1] Length = 703 Score = 96.9 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 25/77 (32%), Positives = 35/77 (45%) Query: 41 LESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 L S A + + + + +V+ L YY LD P DG YDRV ++L AL Sbjct: 7 LFSGAAPAAPESGAAPDKVLAKVQALRAQLNQWAHEYYVLDTPTVPDGEYDRVFQQLQAL 66 Query: 101 QEQFPELFDEDHPWNTV 117 + +PEL D P V Sbjct: 67 EGAYPELVTPDSPTQRV 83 >gi|191637997|ref|YP_001987163.1| DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) [Lactobacillus casei BL23] gi|254781352|sp|B3WD54|DNLJ_LACCB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190712299|emb|CAQ66305.1| DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) [Lactobacillus casei BL23] gi|327382073|gb|AEA53549.1| DNA ligase [Lactobacillus casei LC2W] gi|327385217|gb|AEA56691.1| DNA ligase [Lactobacillus casei BD-II] Length = 674 Score = 96.9 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 33/71 (46%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 AK + EA EVE L K + YY D P TD +YD L AL+E +P+L Sbjct: 3 AKPAAQFTLEEAQAEVEKLRKQLNQWRLEYYTKDAPTVTDNVYDDHYRDLQALEEAYPKL 62 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 63 VTPDSPTQEVG 73 >gi|167581473|ref|ZP_02374347.1| DNA ligase, NAD-dependent [Burkholderia thailandensis TXDOH] Length = 691 Score = 96.9 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 26/64 (40%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S G+ +L YY LD P D YDR+ L ++ + P+L D P Sbjct: 9 SAGQPAKRAAWLRAELERANYAYYVLDQPDLPDAEYDRLFAELQQIEAEHPDLVTPDSPT 68 Query: 115 NTVG 118 VG Sbjct: 69 QRVG 72 >gi|315127017|ref|YP_004069020.1| NAD-dependent DNA ligase [Pseudoalteromonas sp. SM9913] gi|315015531|gb|ADT68869.1| NAD-dependent DNA ligase [Pseudoalteromonas sp. SM9913] Length = 673 Score = 96.9 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 25/58 (43%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +L H YY LD P D YDR+ L L+ Q PE D P VG Sbjct: 7 EQINHLRTTLEQHNYSYYVLDTPSIPDAEYDRLLRTLSELETQHPEFLTADSPTQKVG 64 >gi|119472555|ref|ZP_01614603.1| NAD-dependent DNA ligase [Alteromonadales bacterium TW-7] gi|119444879|gb|EAW26179.1| NAD-dependent DNA ligase [Alteromonadales bacterium TW-7] Length = 672 Score = 96.9 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +L + H YY LD P D YDR+ L AL+ Q PE D P VG Sbjct: 7 EQINHLRTLLEQHNYNYYVLDTPSIPDAEYDRLLRELSALETQNPEFLSADSPTQKVG 64 >gi|291278945|ref|YP_003495780.1| NAD-dependent DNA ligase [Deferribacter desulfuricans SSM1] gi|290753647|dbj|BAI80024.1| NAD-dependent DNA ligase [Deferribacter desulfuricans SSM1] Length = 663 Score = 96.9 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E + LV +H YY L+DP+ +D YD++ +RL ++ ++PE+ P Sbjct: 3 ESILKEYQKLVDEINYHDYRYYVLNDPVISDYEYDQLYKRLKEIESKYPEIISPYSPTQR 62 Query: 117 VGY 119 VGY Sbjct: 63 VGY 65 >gi|218710253|ref|YP_002417874.1| NAD-dependent DNA ligase LigA [Vibrio splendidus LGP32] gi|254782307|sp|B7VIK3|DNLJ_VIBSL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218323272|emb|CAV19449.1| DNA ligase [Vibrio splendidus LGP32] Length = 670 Score = 96.9 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 31/63 (49%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 K + +E L + +H YY D P D YDR+ ++L ++++ PEL D P Sbjct: 2 KESIQVTLEQLRETLHYHAVRYYVEDSPEIPDVEYDRLMQQLLKIEDENPELVTVDSPSQ 61 Query: 116 TVG 118 VG Sbjct: 62 RVG 64 >gi|83720010|ref|YP_442546.1| DNA ligase, NAD-dependent [Burkholderia thailandensis E264] gi|257138755|ref|ZP_05587017.1| DNA ligase, NAD-dependent [Burkholderia thailandensis E264] gi|123753789|sp|Q2SX03|DNLJ_BURTA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|83653835|gb|ABC37898.1| DNA ligase, NAD-dependent [Burkholderia thailandensis E264] Length = 691 Score = 96.9 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 26/64 (40%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S G+ +L YY LD P D YDR+ L ++ + P+L D P Sbjct: 9 SAGQPAKRAAWLRAELERANYAYYVLDQPDLPDAEYDRLFAELQQIEAEHPDLVTPDSPT 68 Query: 115 NTVG 118 VG Sbjct: 69 QRVG 72 >gi|194333271|ref|YP_002015131.1| DNA ligase, NAD-dependent [Prosthecochloris aestuarii DSM 271] gi|254781391|sp|B4S4Y6|DNLJ_PROA2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|194311089|gb|ACF45484.1| DNA ligase, NAD-dependent [Prosthecochloris aestuarii DSM 271] Length = 675 Score = 96.9 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A+ E+ L H YY L P +D +D+ ERL AL++ FP+L D P Sbjct: 1 MQRKDALKEIARLRDELNRHNYRYYVLAQPEISDYAFDQELERLIALEKAFPDLVTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|5733399|gb|AAD49562.1|AF126866_1 NAD-dependent DNA ligase [Pseudoalteromonas haloplanktis] Length = 672 Score = 96.9 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +V +L I H YY LD P D YDR+ L AL+ + PE D P VG Sbjct: 7 EQVNHLRIILEQHNYNYYVLDTPSIPDSEYDRLLRELSALETEHPEFLTADSPTQKVG 64 >gi|167619582|ref|ZP_02388213.1| DNA ligase, NAD-dependent [Burkholderia thailandensis Bt4] Length = 691 Score = 96.9 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 26/64 (40%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S G+ +L YY LD P D YDR+ L ++ + P+L D P Sbjct: 9 SAGQPAKRAAWLRAELERANYAYYVLDQPDLPDAEYDRLFAELQQIEAEHPDLVTPDSPT 68 Query: 115 NTVG 118 VG Sbjct: 69 QRVG 72 >gi|262172020|ref|ZP_06039698.1| DNA ligase [Vibrio mimicus MB-451] gi|261893096|gb|EEY39082.1| DNA ligase [Vibrio mimicus MB-451] Length = 670 Score = 96.9 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 23/60 (38%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + H YY D P D YDR+ L L+ PEL D P VG Sbjct: 4 VEQRLIELRQTLHEHGVRYYVEDAPTIPDAEYDRLMRELLDLEAANPELITPDSPSLRVG 63 >gi|258542980|ref|YP_003188413.1| DNA ligase [Acetobacter pasteurianus IFO 3283-01] gi|256634058|dbj|BAI00034.1| DNA ligase [Acetobacter pasteurianus IFO 3283-01] gi|256637118|dbj|BAI03087.1| DNA ligase [Acetobacter pasteurianus IFO 3283-03] gi|256640170|dbj|BAI06132.1| DNA ligase [Acetobacter pasteurianus IFO 3283-07] gi|256643227|dbj|BAI09182.1| DNA ligase [Acetobacter pasteurianus IFO 3283-22] gi|256646282|dbj|BAI12230.1| DNA ligase [Acetobacter pasteurianus IFO 3283-26] gi|256649335|dbj|BAI15276.1| DNA ligase [Acetobacter pasteurianus IFO 3283-32] gi|256652321|dbj|BAI18255.1| DNA ligase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655379|dbj|BAI21306.1| DNA ligase [Acetobacter pasteurianus IFO 3283-12] Length = 685 Score = 96.9 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ +A E+E L HH YYR D P +D YD + R DA+ Q PE E+ Sbjct: 1 MTQQQAREELERLAAEIAHHNAAYYRNDAPEISDAEYDALRRRYDAIVAQHPEAEPENSA 60 Query: 114 WNTVG 118 VG Sbjct: 61 AQAVG 65 >gi|258627076|ref|ZP_05721872.1| DNA ligase [Vibrio mimicus VM603] gi|258580594|gb|EEW05547.1| DNA ligase [Vibrio mimicus VM603] Length = 670 Score = 96.9 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 23/60 (38%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + H YY D P D YDR+ L L+ PEL D P VG Sbjct: 4 VEQRLIELRQTLHEHGVRYYVEDAPTIPDAEYDRLMRELLDLEAANPELITPDSPSLRVG 63 >gi|319951546|ref|ZP_08025350.1| NAD-dependent DNA ligase LigA [Dietzia cinnamea P4] gi|319434794|gb|EFV90110.1| NAD-dependent DNA ligase LigA [Dietzia cinnamea P4] Length = 726 Score = 96.9 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 1/79 (1%) Query: 41 LESWLDKAKKVTSLS-KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDA 99 + D + V + E E L + HQ YY D P+ +D +DR+ L A Sbjct: 1 MSQASDSTEPVGTGDIPPEIRQEWTELAETVRDHQFRYYVKDAPIVSDAEFDRLFGELQA 60 Query: 100 LQEQFPELFDEDHPWNTVG 118 L+E++P L D P VG Sbjct: 61 LEEKYPALRTADSPTQLVG 79 >gi|319655032|ref|ZP_08009103.1| DNA ligase [Bacillus sp. 2_A_57_CT2] gi|317393299|gb|EFV74066.1| DNA ligase [Bacillus sp. 2_A_57_CT2] Length = 668 Score = 96.9 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + A V+ L + + Y+ LD P D YDR+ L L+ QFPEL ED P Sbjct: 1 MDLQLAEKRVKDLHNLLNQYNYEYHVLDQPSVPDAEYDRLMRDLIELEGQFPELKTEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|258621988|ref|ZP_05717017.1| DNA ligase [Vibrio mimicus VM573] gi|258585741|gb|EEW10461.1| DNA ligase [Vibrio mimicus VM573] Length = 670 Score = 96.9 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 23/60 (38%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + H YY D P D YDR+ L L+ PEL D P VG Sbjct: 4 VEQRLIELRQTLHEHGVRYYVEDAPTIPDAEYDRLMRELLDLEAANPELITPDSPSLRVG 63 >gi|11095423|gb|AAG29863.1|AF313764_6 DNA ligase [Zymomonas mobilis subsp. mobilis ZM4] gi|49284|emb|CAA77966.1| DNA ligase [Zymomonas mobilis subsp. mobilis CP4] gi|382210|prf||1819268B DNA ligase Length = 731 Score = 96.9 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 37/67 (55%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 +LS+ +A+IE+E L K+ H+ Y+ D+P D YD + R +++ FP+L D Sbjct: 24 KNLSREQAVIELERLAKLISHYDHLYHDKDNPAVPDSEYDALVLRNRRIEQFFPDLIRPD 83 Query: 112 HPWNTVG 118 P VG Sbjct: 84 SPSKKVG 90 >gi|223041748|ref|ZP_03611941.1| DNA ligase [Actinobacillus minor 202] gi|223017432|gb|EEF15850.1| DNA ligase [Actinobacillus minor 202] Length = 680 Score = 96.9 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 29/58 (50%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+E L ++ Y+ LD+PL D YDR+ L L+ Q PEL D P VG Sbjct: 14 SEIETLRNKLREYEYHYHVLDNPLVPDAEYDRLMNELKNLEWQHPELITPDSPTQRVG 71 >gi|170733380|ref|YP_001765327.1| DNA ligase, NAD-dependent [Burkholderia cenocepacia MC0-3] gi|254781274|sp|B1JUF5|DNLJ_BURCC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|169816622|gb|ACA91205.1| DNA ligase, NAD-dependent [Burkholderia cenocepacia MC0-3] Length = 691 Score = 96.9 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 22/58 (37%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YDR+ L L+ PEL D P VG Sbjct: 15 ARAAWLRDQLERANHAYYVLDQPDLPDAEYDRLFRELQQLETDHPELVTPDSPTQRVG 72 >gi|240948595|ref|ZP_04752968.1| NAD-dependent DNA ligase LigA [Actinobacillus minor NM305] gi|240297103|gb|EER47674.1| NAD-dependent DNA ligase LigA [Actinobacillus minor NM305] Length = 679 Score = 96.9 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 31/60 (51%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ E+E L ++ Y+ LD+PL D YDR+ L L+ Q PEL D P VG Sbjct: 12 SLSEIETLRNKLREYEYHYHVLDNPLVPDAEYDRLMNELKNLEWQHPELITPDSPTQRVG 71 >gi|56551260|ref|YP_162099.1| DNA ligase, NAD-dependent [Zymomonas mobilis subsp. mobilis ZM4] gi|59802648|sp|P28719|DNLJ_ZYMMO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|56542834|gb|AAV88988.1| DNA ligase, NAD-dependent [Zymomonas mobilis subsp. mobilis ZM4] Length = 731 Score = 96.9 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 36/67 (53%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 LS+ +A+IE+E L K+ H+ Y+ D+P D YD + R +++ FP+L D Sbjct: 24 KDLSREQAVIELERLAKLISHYDHLYHDKDNPAVPDSEYDALVLRNRRIEQFFPDLIRPD 83 Query: 112 HPWNTVG 118 P VG Sbjct: 84 SPSKKVG 90 >gi|302871618|ref|YP_003840254.1| DNA ligase, NAD-dependent [Caldicellulosiruptor obsidiansis OB47] gi|302574477|gb|ADL42268.1| DNA ligase, NAD-dependent [Caldicellulosiruptor obsidiansis OB47] Length = 673 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + +H YY D+P +D YD + L L++Q+PE D P VG Sbjct: 5 IKKRIRELVDLINYHDYKYYVEDNPEISDYEYDMLYRELVELEKQYPEYVLPDSPTQRVG 64 >gi|312877316|ref|ZP_07737282.1| DNA ligase, NAD-dependent [Caldicellulosiruptor lactoaceticus 6A] gi|311795879|gb|EFR12242.1| DNA ligase, NAD-dependent [Caldicellulosiruptor lactoaceticus 6A] Length = 673 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + +H YY D+P +D YD + L L++Q+PE D P VG Sbjct: 5 IKKRIRELVDLINYHDYKYYVEDNPEISDYEYDMLYRELVELEKQYPEYVFPDSPTQRVG 64 >gi|312793814|ref|YP_004026737.1| DNA ligase, nad-dependent [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180954|gb|ADQ41124.1| DNA ligase, NAD-dependent [Caldicellulosiruptor kristjanssonii 177R1B] Length = 673 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + +H YY D+P +D YD + L L++Q+PE D P VG Sbjct: 5 IKKRIRELVDLINYHDYKYYVEDNPEISDYEYDMLYRELVELEKQYPEYVFPDSPTQRVG 64 >gi|78357136|ref|YP_388585.1| DNA ligase, NAD-dependent [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123768784|sp|Q30ZK6|DNLJ_DESDG RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|78219541|gb|ABB38890.1| DNA ligase, NAD-dependent [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 705 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V + +E L + +H YY +D+P +D YD + L L+E+ PE Sbjct: 7 PVKQ-DSAKVEQRMEELRTLLEYHGHRYYVMDEPEISDAEYDALFRELVRLEEEHPEHIH 65 Query: 110 EDHPWNTVG 118 P + VG Sbjct: 66 PGSPTHKVG 74 >gi|312127350|ref|YP_003992224.1| DNA ligase, nad-dependent [Caldicellulosiruptor hydrothermalis 108] gi|311777369|gb|ADQ06855.1| DNA ligase, NAD-dependent [Caldicellulosiruptor hydrothermalis 108] Length = 673 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + +H YY D+P +D YD + L L++Q+PE D P VG Sbjct: 5 IKKRIRELVDLINYHDYKYYVEDNPEISDYEYDMLYRELVELEKQYPEYVFPDSPTQRVG 64 >gi|163782033|ref|ZP_02177032.1| D-tyrosyl-tRNA deacylase [Hydrogenivirga sp. 128-5-R1-1] gi|159882565|gb|EDP76070.1| D-tyrosyl-tRNA deacylase [Hydrogenivirga sp. 128-5-R1-1] Length = 715 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 3/87 (3%) Query: 31 EAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLY 90 E + + R L S L++ +K K EA V+ L ++ +H YY P+ +D Y Sbjct: 7 ERELIELTRKLLSELERIRKAG---KEEAQEYVQELREVINYHDYKYYVQASPVISDYEY 63 Query: 91 DRVSERLDALQEQFPELFDEDHPWNTV 117 D++ L L++++PEL D P V Sbjct: 64 DQLFRALRDLEKKYPELITPDSPTQRV 90 >gi|312135376|ref|YP_004002714.1| DNA ligase, nad-dependent [Caldicellulosiruptor owensensis OL] gi|311775427|gb|ADQ04914.1| DNA ligase, NAD-dependent [Caldicellulosiruptor owensensis OL] Length = 673 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + +H YY D+P +D YD + L L++Q+PE D P VG Sbjct: 5 IKKRIRELVDLINYHDYKYYVEDNPEISDYEYDMLYRELVELEKQYPEYVLPDSPTQRVG 64 >gi|206560458|ref|YP_002231222.1| DNA ligase [Burkholderia cenocepacia J2315] gi|254781275|sp|B4ECN6|DNLJ_BURCJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|198036499|emb|CAR52396.1| DNA ligase [Burkholderia cenocepacia J2315] Length = 691 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 22/58 (37%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YDR+ L L+ PEL D P VG Sbjct: 15 ARAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFRELQQLETDHPELVTPDSPTQRVG 72 >gi|172036733|ref|YP_001803234.1| DNA ligase [Cyanothece sp. ATCC 51142] gi|254781304|sp|B1WZL6|DNLJ_CYAA5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|171698187|gb|ACB51168.1| DNA ligase [Cyanothece sp. ATCC 51142] Length = 676 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E V L + YY LDDP+ D +YD++ LD+L+++ P+L D P V Sbjct: 6 EIKQRVTQLRQQLQKANYAYYVLDDPIMEDAVYDQLYRELDSLEKEHPQLITPDSPTQRV 65 Query: 118 G 118 G Sbjct: 66 G 66 >gi|223936891|ref|ZP_03628800.1| DNA ligase, NAD-dependent [bacterium Ellin514] gi|223894460|gb|EEF60912.1| DNA ligase, NAD-dependent [bacterium Ellin514] Length = 680 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 29/64 (45%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ EA LV+ H YY P +D YDR+ L L+++FP+L D P Sbjct: 1 MTHNEAKTRHTQLVEEIRGHDNAYYVEAKPTISDQAYDRLYHELLDLEKKFPDLITSDSP 60 Query: 114 WNTV 117 V Sbjct: 61 SQRV 64 >gi|78047224|ref|YP_363399.1| NAD-dependent DNA ligase LigA [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123744002|sp|Q3BV14|DNLJ_XANC5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|78035654|emb|CAJ23345.1| DNA ligase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 833 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ L + Y+ LD+P D YD++ L+AL+ PEL D P VG+ Sbjct: 8 AQRIDALRRRIEDANYRYHVLDEPQMADADYDKLMRELEALERAHPELASADSPTQRVGH 67 >gi|145224827|ref|YP_001135505.1| NAD-dependent DNA ligase LigA [Mycobacterium gilvum PYR-GCK] gi|190359265|sp|A4TDZ8|DNLJ_MYCGI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145217313|gb|ABP46717.1| DNA ligase, NAD-dependent [Mycobacterium gilvum PYR-GCK] Length = 712 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 8/78 (10%) Query: 49 KKVTSLSKGEA--------MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 S+ +A + L HQ YY D P+ TD +D++ RL AL Sbjct: 7 PDPESMLAEQAHDALDPDLRRSWQELADEVREHQFRYYIRDAPIITDAEFDQLLRRLQAL 66 Query: 101 QEQFPELFDEDHPWNTVG 118 ++++PEL D P VG Sbjct: 67 EDEYPELRTPDSPTQLVG 84 >gi|312622179|ref|YP_004023792.1| DNA ligase, nad-dependent [Caldicellulosiruptor kronotskyensis 2002] gi|312202646|gb|ADQ45973.1| DNA ligase, NAD-dependent [Caldicellulosiruptor kronotskyensis 2002] Length = 673 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + +H YY D+P +D YD + L L++Q+PE D P VG Sbjct: 5 IKKRIRELVDLINYHDYKYYVEDNPEISDYEYDMLYRELVELEKQYPEYVFPDSPTQRVG 64 >gi|294665962|ref|ZP_06731226.1| DNA ligase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604265|gb|EFF47652.1| DNA ligase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 833 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ L + Y+ LD+P D YD++ L+AL+ PEL D P VG+ Sbjct: 8 AQRIDALRRRIEDANYRYHVLDEPQMADADYDKLMRELEALERAHPELASADSPTQRVGH 67 >gi|21242377|ref|NP_641959.1| NAD-dependent DNA ligase LigA [Xanthomonas axonopodis pv. citri str. 306] gi|81803317|sp|Q8PM07|DNLJ_XANAC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|21107814|gb|AAM36495.1| DNA ligase [Xanthomonas axonopodis pv. citri str. 306] Length = 833 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ L + Y+ LD+P D YD++ L+AL+ PEL D P VG+ Sbjct: 8 AQRIDALRRRIEDANYRYHVLDEPQMADADYDKLMRELEALERAHPELASADSPTQRVGH 67 >gi|116690045|ref|YP_835668.1| DNA ligase, NAD-dependent [Burkholderia cenocepacia HI2424] gi|166215562|sp|A0K8E8|DNLJ_BURCH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166215593|sp|Q1BHI7|DNLJ_BURCA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116648134|gb|ABK08775.1| DNA ligase, NAD-dependent [Burkholderia cenocepacia HI2424] Length = 691 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 22/58 (37%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YDR+ L L+ PEL D P VG Sbjct: 15 ARAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFRELQQLETDHPELVTPDSPTQRVG 72 >gi|78066803|ref|YP_369572.1| DNA ligase (NAD+) [Burkholderia sp. 383] gi|123742568|sp|Q39F38|DNLJ_BURS3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|77967548|gb|ABB08928.1| DNA ligase (NAD+) [Burkholderia sp. 383] Length = 691 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 22/58 (37%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YDR+ L L+ PEL D P VG Sbjct: 15 ARAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFRELQQLETDHPELVTPDSPTQRVG 72 >gi|254247879|ref|ZP_04941200.1| NAD-dependent DNA ligase [Burkholderia cenocepacia PC184] gi|124872655|gb|EAY64371.1| NAD-dependent DNA ligase [Burkholderia cenocepacia PC184] Length = 691 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 22/58 (37%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YDR+ L L+ PEL D P VG Sbjct: 15 ARAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFRELQQLETDHPELVTPDSPTQRVG 72 >gi|258651684|ref|YP_003200840.1| DNA ligase, NAD-dependent [Nakamurella multipartita DSM 44233] gi|258554909|gb|ACV77851.1| DNA ligase, NAD-dependent [Nakamurella multipartita DSM 44233] Length = 736 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Query: 45 LDKAKKVTSLS----KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +D + L+ EA L +I Q YY LD P +DG +D V LD L Sbjct: 5 IDSLPESAELTALGVPPEAAHRHAELTQIITDAQFRYYVLDAPTMSDGEFDTVLRELDGL 64 Query: 101 QEQFPELFDEDHPWNTVG 118 +EQ+P L D P VG Sbjct: 65 EEQYPSLRTPDSPTQRVG 82 >gi|145633173|ref|ZP_01788905.1| DNA ligase [Haemophilus influenzae 3655] gi|144986399|gb|EDJ92978.1| DNA ligase [Haemophilus influenzae 3655] Length = 670 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 4 IQTQLDNLRKTLRQYEYEYHVLDNPTVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|146296740|ref|YP_001180511.1| DNA ligase, NAD-dependent [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166215569|sp|A4XK85|DNLJ_CALS8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145410316|gb|ABP67320.1| DNA ligase, NAD-dependent [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 673 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + +H YY D+P +D YD + L L++Q+PE D P VG Sbjct: 5 IKKRIRELVDLINYHDYKYYVEDNPEISDYEYDMLYRELVELEKQYPEYIFPDSPTQRVG 64 >gi|325928155|ref|ZP_08189364.1| DNA ligase, NAD-dependent [Xanthomonas perforans 91-118] gi|325541451|gb|EGD12984.1| DNA ligase, NAD-dependent [Xanthomonas perforans 91-118] Length = 833 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ L + Y+ LD+P D YD++ L+AL+ PEL D P VG+ Sbjct: 8 AQRIDALRRRIEDANYRYHVLDEPQMADADYDKLMRELEALERAHPELASADSPTQRVGH 67 >gi|229512467|ref|ZP_04401940.1| DNA ligase [Vibrio cholerae TMA 21] gi|229350548|gb|EEO15495.1| DNA ligase [Vibrio cholerae TMA 21] Length = 669 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L +I H YY D P D YDR+ L L+ PEL D P VG Sbjct: 4 VEQKLTELRQILHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLRVG 63 >gi|259907817|ref|YP_002648173.1| NAD-dependent DNA ligase LigA [Erwinia pyrifoliae Ep1/96] gi|224963439|emb|CAX54927.1| DNA ligase [Erwinia pyrifoliae Ep1/96] gi|283477688|emb|CAY73604.1| DNA ligase [Erwinia pyrifoliae DSM 12163] Length = 678 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 29/62 (46%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ +L + H++ Y+ LD P D YDR+ L L+ Q PEL D P Sbjct: 2 ESVQDKITHLRTLLRHYEYQYHVLDAPAVPDAEYDRLMGELRDLEAQHPELLTSDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|310657889|ref|YP_003935610.1| DNA ligase [Clostridium sticklandii DSM 519] gi|308824667|emb|CBH20705.1| DNA ligase, NAD(+)-dependent [Clostridium sticklandii] Length = 683 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 35/67 (52%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 S+++ + ++ L + HH YY D P +D +D + + L AL+E++PE ED Sbjct: 3 ESINEKDIYNKINELRERIEHHSILYYVQDSPEISDADFDMLMKELIALEEKYPEYITED 62 Query: 112 HPWNTVG 118 P +G Sbjct: 63 SPTQRIG 69 >gi|150021387|ref|YP_001306741.1| DNA ligase, NAD-dependent [Thermosipho melanesiensis BI429] gi|190359297|sp|A6LN55|DNLJ_THEM4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|149793908|gb|ABR31356.1| DNA ligase, NAD-dependent [Thermosipho melanesiensis BI429] Length = 662 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 33/60 (55%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+E L K +H YY L DP+ +D YDR+ ++L L++++P+ + P VG Sbjct: 4 IKEEIERLRKEIEYHNYRYYVLADPIISDEEYDRLLKKLIELEKKYPKFSSPNSPTQKVG 63 >gi|307546309|ref|YP_003898788.1| DNA ligase, NAD-dependent [Halomonas elongata DSM 2581] gi|307218333|emb|CBV43603.1| DNA ligase, NAD-dependent [Halomonas elongata DSM 2581] Length = 700 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Query: 49 KKVTSLSKGE--AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 + +++ + E L YY LD+P TD YDR RL ++ ++PE Sbjct: 14 RDTDDMTQPDPTIQDEAARLRAELDDANHRYYVLDEPRMTDADYDRKLRRLQEIETEYPE 73 Query: 107 LFDEDHPWNTVG 118 L D P VG Sbjct: 74 LVRPDSPTQRVG 85 >gi|300087757|ref|YP_003758279.1| DNA ligase, NAD-dependent [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527490|gb|ADJ25958.1| DNA ligase, NAD-dependent [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 687 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 31/62 (50%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 EA ++ L K HH YY D+P +D YD + L L+ +FPEL ++ P Sbjct: 2 DEAKKRIDTLRKQITHHNYLYYVKDEPEISDQEYDILFRELQILENEFPELASDESPTKI 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|219870289|ref|YP_002474664.1| NAD-dependent DNA ligase LigA [Haemophilus parasuis SH0165] gi|254781340|sp|B8F314|DNLJ_HAEPS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219690493|gb|ACL31716.1| NAD-dependent DNA ligase LigA [Haemophilus parasuis SH0165] Length = 675 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 31/60 (51%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E+L + ++ Y+ LD+PL D YDR+ L L+ Q PEL D P VG Sbjct: 5 IETQLEHLREKLREYEYHYHVLDNPLVPDAEYDRLMNELKNLEWQHPELITSDSPTQRVG 64 >gi|325675870|ref|ZP_08155554.1| DNA ligase [Rhodococcus equi ATCC 33707] gi|325553841|gb|EGD23519.1| DNA ligase [Rhodococcus equi ATCC 33707] Length = 711 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 35/62 (56%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E + L ++ +HQ YY LD P+ +DG +D++ L+AL+E+ P+L D P Sbjct: 23 AEDRERWQELAEVVRNHQFRYYVLDSPIVSDGEFDQLFGELNALEERHPDLRTPDSPTQL 82 Query: 117 VG 118 VG Sbjct: 83 VG 84 >gi|330817444|ref|YP_004361149.1| DNA ligase [Burkholderia gladioli BSR3] gi|327369837|gb|AEA61193.1| DNA ligase [Burkholderia gladioli BSR3] Length = 691 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +L YY LD P D YDR+ L ++ + P+L D P Sbjct: 11 SQPSERAAWLRNELERANHAYYVLDQPDLPDAEYDRLFRELQQIEAEHPDLITPDSPTQR 70 Query: 117 VG 118 VG Sbjct: 71 VG 72 >gi|312796238|ref|YP_004029160.1| NAD-dependent DNA ligase [Burkholderia rhizoxinica HKI 454] gi|312168013|emb|CBW75016.1| NAD-dependent DNA ligase (EC 6.5.1.2) [Burkholderia rhizoxinica HKI 454] Length = 681 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 24/59 (40%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YD++ + L+ ++ P+L D P VG Sbjct: 14 AERAAWLRTELDRANHAYYVLDRPEIPDAEYDKLFKELEQIEADHPDLITPDSPTQRVG 72 >gi|312140511|ref|YP_004007847.1| DNA ligase (nad+) liga [Rhodococcus equi 103S] gi|311889850|emb|CBH49167.1| DNA ligase (NAD+) LigA [Rhodococcus equi 103S] Length = 712 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 35/62 (56%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E + L ++ +HQ YY LD P+ +DG +D++ L+AL+E+ P+L D P Sbjct: 23 AEDRERWQELAEVVRNHQFRYYVLDSPIVSDGEFDQLFGELNALEERHPDLRTPDSPTQL 82 Query: 117 VG 118 VG Sbjct: 83 VG 84 >gi|325141882|gb|EGC64324.1| DNA ligase, NAD-dependent [Neisseria meningitidis 961-5945] Length = 841 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALERNHPELKLPDSPTQRVG 85 >gi|167855687|ref|ZP_02478444.1| NAD-dependent DNA ligase LigA [Haemophilus parasuis 29755] gi|167853205|gb|EDS24462.1| NAD-dependent DNA ligase LigA [Haemophilus parasuis 29755] Length = 675 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 31/60 (51%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E+L + ++ Y+ LD+PL D YDR+ L L+ Q PEL D P VG Sbjct: 5 IETQLEHLREKLREYEYHYHVLDNPLVPDAEYDRLMNELKNLEWQHPELITSDSPTQRVG 64 >gi|77919807|ref|YP_357622.1| DNA ligase, NAD-dependent [Pelobacter carbinolicus DSM 2380] gi|123756590|sp|Q3A2F5|DNLJ_PELCD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|77545890|gb|ABA89452.1| DNA ligase, NAD-dependent [Pelobacter carbinolicus DSM 2380] Length = 671 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K + + + L H + YY D P TD YDR+ L L++ +PEL P Sbjct: 1 MDKAQRIRRYQQLCDELHRHSRLYYTYDRPEITDAEYDRLFRELLELEKAYPELVTAASP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SLRVG 65 >gi|288927843|ref|ZP_06421690.1| DNA ligase, NAD-dependent [Prevotella sp. oral taxon 317 str. F0108] gi|288330677|gb|EFC69261.1| DNA ligase, NAD-dependent [Prevotella sp. oral taxon 317 str. F0108] Length = 665 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + +E L + HH YY + P +D +DR+ L L+ + PE++D + P V Sbjct: 2 EEIKRIEELREQLHHHNYLYYVQNSPTLSDQEFDRLMRELQDLEAKHPEVYDPNSPTQRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|260219439|emb|CBA26284.1| DNA ligase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 696 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 29/74 (39%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 LD ++ ++ L + YY LD PL D YDR+ L L+ Q Sbjct: 4 LDLFSPEPAVPDSLPHKRLQALREELHRLGHAYYVLDAPLVPDVEYDRLFRELQDLEAQH 63 Query: 105 PELFDEDHPWNTVG 118 PE D P VG Sbjct: 64 PEWVTPDSPTQRVG 77 >gi|227535466|ref|ZP_03965515.1| DNA ligase (polydeoxyribonucleotide synthase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227186876|gb|EEI66943.1| DNA ligase (polydeoxyribonucleotide synthase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 674 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 32/71 (45%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 AK + EA EVE L K + YY D P TD +YD L AL+ +P+L Sbjct: 3 AKPAAQFTLEEAQAEVEKLRKQLNQWRLEYYTKDAPTVTDNVYDDHYRDLQALEAAYPKL 62 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 63 VTPDSPTQEVG 73 >gi|329120426|ref|ZP_08249092.1| NAD-dependent DNA ligase LigA [Neisseria bacilliformis ATCC BAA-1200] gi|327462110|gb|EGF08438.1| NAD-dependent DNA ligase LigA [Neisseria bacilliformis ATCC BAA-1200] Length = 887 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 6/96 (6%) Query: 29 TLEAKFLPNKRALESWLDKAKKVTSLSKG------EAMIEVEYLVKIALHHQKWYYRLDD 82 L+ ++ P++ + + SL+ + ++ L + + YY LD Sbjct: 31 RLKTRYRPSENRFPRFQTASNISDSLTFQIDTRMNDPAAKIRELTDLLNRYGYEYYTLDA 90 Query: 83 PLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 P D YDR+ L+AL+ PEL D P VG Sbjct: 91 PSVPDAEYDRLFRELEALEAAHPELKLPDSPTQRVG 126 >gi|256822391|ref|YP_003146354.1| NAD-dependent DNA ligase [Kangiella koreensis DSM 16069] gi|256795930|gb|ACV26586.1| DNA ligase, NAD-dependent [Kangiella koreensis DSM 16069] Length = 667 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E V L ++ YY LDDP D YDR+ L ++ + PEL D P Sbjct: 2 SELEKRVAELRVTLDNYNHQYYVLDDPSVPDAEYDRLLRELQQIESEHPELISSDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|307257368|ref|ZP_07539138.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864218|gb|EFM96131.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 682 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L + ++ +Y+ LD+PL D YDR+ L L+ Q PE D P VG Sbjct: 16 AQLEALRQKLREYEYYYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITADSPTQRVG 73 >gi|254670337|emb|CBA05747.1| DNA ligase [Neisseria meningitidis alpha153] Length = 841 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALERNHPELKLPDSPTQRVG 85 >gi|331695637|ref|YP_004331876.1| DNA ligase [Pseudonocardia dioxanivorans CB1190] gi|326950326|gb|AEA24023.1| DNA ligase [Pseudonocardia dioxanivorans CB1190] Length = 812 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L HQ YY LD P+ +DG +D + L AL+E++P+L D P VG Sbjct: 27 RERHAALATEVADHQFRYYVLDAPVVSDGQFDELWRELVALEERYPDLVSPDSPTQKVG 85 >gi|218767787|ref|YP_002342299.1| putative DNA ligase [Neisseria meningitidis Z2491] gi|166216217|sp|A1IQR7|DNLJ_NEIMA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|121051795|emb|CAM08101.1| putative DNA ligase [Neisseria meningitidis Z2491] gi|319410038|emb|CBY90372.1| DNA ligase (polydeoxyribonucleotide synthase [NAD+]) [Neisseria meningitidis WUE 2594] Length = 841 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALERNHPELKLPDSPTQRVG 85 >gi|325129804|gb|EGC52612.1| DNA ligase, NAD-dependent [Neisseria meningitidis OX99.30304] Length = 841 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 36/83 (43%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + + + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNLTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALERNHPELKLPDSPTQRVG 85 >gi|325135742|gb|EGC58354.1| DNA ligase, NAD-dependent [Neisseria meningitidis M0579] Length = 841 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 36/83 (43%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + + + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNLTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALERNHPELKLPDSPTQRVG 85 >gi|307246220|ref|ZP_07528301.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255203|ref|ZP_07537019.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259638|ref|ZP_07541362.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852829|gb|EFM85053.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861831|gb|EFM93809.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866283|gb|EFM98147.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 682 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L + ++ +Y+ LD+PL D YDR+ L L+ Q PE D P VG Sbjct: 16 AQLEALRQKLREYEYYYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITADSPTQRVG 73 >gi|217970592|ref|YP_002355826.1| DNA ligase, NAD-dependent [Thauera sp. MZ1T] gi|217507919|gb|ACK54930.1| DNA ligase, NAD-dependent [Thauera sp. MZ1T] Length = 693 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 22/46 (47%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD P D YDR+ L A++ +P L D P VG Sbjct: 30 HDHAYYVLDAPTIPDAEYDRLFRELQAIERAYPALRSADSPTQRVG 75 >gi|190150622|ref|YP_001969147.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263969|ref|ZP_07545570.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|254781246|sp|B3H275|DNLJ_ACTP7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|189915753|gb|ACE62005.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870658|gb|EFN02401.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 682 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L + ++ +Y+ LD+PL D YDR+ L L+ Q PE D P VG Sbjct: 16 AQLEALRQKLREYEYYYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITADSPTQRVG 73 >gi|165976722|ref|YP_001652315.1| NAD-dependent DNA ligase LigA [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190359223|sp|B0BQN6|DNLJ_ACTPJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|165876823|gb|ABY69871.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 682 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L + ++ +Y+ LD+PL D YDR+ L L+ Q PE D P VG Sbjct: 16 AQLEALRQKLREYEYYYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITADSPTQRVG 73 >gi|307248328|ref|ZP_07530352.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306855149|gb|EFM87328.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 682 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L + ++ +Y+ LD+PL D YDR+ L L+ Q PE D P VG Sbjct: 16 AQLEALRQKLREYEYYYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITADSPTQRVG 73 >gi|187734527|ref|YP_001876639.1| DNA ligase, NAD-dependent [Akkermansia muciniphila ATCC BAA-835] gi|254781249|sp|B2UL69|DNLJ_AKKM8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|187424579|gb|ACD03858.1| DNA ligase, NAD-dependent [Akkermansia muciniphila ATCC BAA-835] Length = 794 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 36/81 (44%) Query: 38 KRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 RA E+ + ++ A ++YL H + YY +P +D YD + L Sbjct: 24 PRAGEARENAGTDHPGNAEDPAHRRIDYLRSELRRHNRLYYEQAEPEISDAEYDALFLEL 83 Query: 98 DALQEQFPELFDEDHPWNTVG 118 + L++ PEL D D P VG Sbjct: 84 EKLEKAHPELSDPDSPTRRVG 104 >gi|197336238|ref|YP_002156719.1| DNA ligase, NAD-dependent [Vibrio fischeri MJ11] gi|254781450|sp|B5FGU7|DNLJ_VIBFM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|197317728|gb|ACH67175.1| DNA ligase, NAD-dependent [Vibrio fischeri MJ11] Length = 668 Score = 96.1 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + +H YY D P D YDR+ + L +++ + PEL D P VG Sbjct: 7 LDELKQQLNYHAYRYYVEDSPELPDAEYDRMMQELLSIESEHPELVTVDSPSQRVG 62 >gi|328956034|ref|YP_004373367.1| DNA ligase, NAD-dependent [Coriobacterium glomerans PW2] gi|328456358|gb|AEB07552.1| DNA ligase, NAD-dependent [Coriobacterium glomerans PW2] Length = 752 Score = 96.1 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 3/75 (4%) Query: 47 KAKKVTSLSKGEA---MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQ 103 A+ ++ A E L ++ +H YY LD P +D +DR+ L ++ + Sbjct: 29 TAQPAGHMTSTAAVPPAERAEELRRLLDYHAYRYYALDAPEISDAQFDRLLRELQQIEVE 88 Query: 104 FPELFDEDHPWNTVG 118 P+L D VG Sbjct: 89 HPDLITPDSYTQRVG 103 >gi|161831535|ref|YP_001596473.1| DNA ligase, NAD-dependent [Coxiella burnetii RSA 331] gi|190359249|sp|A9NC33|DNLJ_COXBR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|161763402|gb|ABX79044.1| DNA ligase, NAD-dependent [Coxiella burnetii RSA 331] Length = 670 Score = 96.1 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + +E L H YY L P D +YD + L+ L++++PE P Sbjct: 4 PAKIQKRIERLRHEINDHNYRYYVLSQPTIPDSVYDELFHELEKLEKKYPETITPSSPTQ 63 Query: 116 TVG 118 VG Sbjct: 64 RVG 66 >gi|160902460|ref|YP_001568041.1| DNA ligase, NAD-dependent [Petrotoga mobilis SJ95] gi|190359269|sp|A9BJX5|DNLJ_PETMO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|160360104|gb|ABX31718.1| DNA ligase, NAD-dependent [Petrotoga mobilis SJ95] Length = 668 Score = 96.1 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 29/60 (48%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L H YY L DP+ +D YD++ + L L++++PEL D P +G Sbjct: 7 IKERYEKLKAEIEEHNYRYYVLADPIISDQEYDKLFKELVELEKKYPELKTPDSPTQRIG 66 >gi|222529603|ref|YP_002573485.1| DNA ligase, NAD-dependent [Caldicellulosiruptor bescii DSM 6725] gi|254781543|sp|B9MK54|DNLJ_ANATD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|222456450|gb|ACM60712.1| DNA ligase, NAD-dependent [Caldicellulosiruptor bescii DSM 6725] Length = 673 Score = 96.1 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + +H YY D+P +D YD + L L++Q+PE D P VG Sbjct: 5 IRKRIRELVDLINYHDYKYYVEDNPEISDYEYDMLYRELVELEKQYPEYVFPDSPTQRVG 64 >gi|288554984|ref|YP_003426919.1| NAD-dependent DNA ligase LigA [Bacillus pseudofirmus OF4] gi|288546144|gb|ADC50027.1| NAD-dependent DNA ligase LigA [Bacillus pseudofirmus OF4] Length = 668 Score = 96.1 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + EA V+ L + + YY LD PL TD YD++ + L AL+ + PEL ED P Sbjct: 1 MDRQEAEKRVQTLREKLEEYGYHYYVLDQPLVTDAEYDQLMQELIALEGEHPELVSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|124302218|gb|ABN05294.1| DNA ligase [Geobacillus sp. g] Length = 670 Score = 96.1 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A L ++ + YY L P D YDR+ + L A++EQ+PEL D P Sbjct: 1 MDRQQAERRAAELRELLHRYGYEYYVLGRPSVPDAEYDRLMQELMAIEEQYPELKTSDSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 TQRIG 65 >gi|307261779|ref|ZP_07543445.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868597|gb|EFN00408.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 676 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L + ++ +Y+ LD+PL D YDR+ L L+ Q PE D P VG Sbjct: 10 AQLEALRQKLREYEYYYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITADSPTQRVG 67 >gi|311067136|ref|YP_003972059.1| NAD-dependent DNA ligase LigA [Bacillus atrophaeus 1942] gi|310867653|gb|ADP31128.1| NAD-dependent DNA ligase LigA [Bacillus atrophaeus 1942] Length = 668 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A E L + YY LD+P D YD++ + L L+E+ P+L D P Sbjct: 1 MDKEAAKRRAEDLRSTINQYSYEYYTLDEPSVPDSEYDKLMQELLDLEEEHPDLRTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|269792727|ref|YP_003317631.1| DNA ligase, NAD-dependent [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100362|gb|ACZ19349.1| DNA ligase, NAD-dependent [Thermanaerovibrio acidaminovorans DSM 6589] Length = 673 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 31/64 (48%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + A +E L ++ HH + YY+ + P TD YD + L L+ FP+L D P Sbjct: 1 MDRSAARSRMEELAELIRHHDRLYYQENSPEITDQEYDALFRELVDLERSFPDLRLPDSP 60 Query: 114 WNTV 117 V Sbjct: 61 TLRV 64 >gi|307250556|ref|ZP_07532498.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857372|gb|EFM89486.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 682 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L + ++ +Y+ LD+PL D YDR+ L L+ Q PE D P VG Sbjct: 16 AQLEALRQKLREYEYYYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITADSPTQRVG 73 >gi|295836378|ref|ZP_06823311.1| DNA ligase, NAD-dependent [Streptomyces sp. SPB74] gi|295825992|gb|EDY45591.2| DNA ligase, NAD-dependent [Streptomyces sp. SPB74] Length = 818 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 29/62 (46%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 E E + + H+ YY D P+ +D +D + RL AL+E+ P+L D P Sbjct: 49 PAEVREEHSRVAREVDEHRYRYYVNDQPVVSDADFDALLRRLTALEEEHPQLRTPDSPTQ 108 Query: 116 TV 117 V Sbjct: 109 KV 110 >gi|229846132|ref|ZP_04466244.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae 7P49H1] gi|229811136|gb|EEP46853.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae 7P49H1] Length = 670 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 4 IQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|315445158|ref|YP_004078037.1| DNA ligase, NAD-dependent [Mycobacterium sp. Spyr1] gi|315263461|gb|ADU00203.1| DNA ligase, NAD-dependent [Mycobacterium sp. Spyr1] Length = 701 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 30/56 (53%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L HQ YY D P+ TD +D++ RL AL++++PEL D P VG Sbjct: 18 WQELADEVREHQFRYYIRDAPIITDAEFDQLLRRLQALEDEYPELRTPDSPTQLVG 73 >gi|307718507|ref|YP_003874039.1| DNA ligase [Spirochaeta thermophila DSM 6192] gi|306532232|gb|ADN01766.1| DNA ligase [Spirochaeta thermophila DSM 6192] Length = 673 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 34/65 (52%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ EA E++ LV++ YY L P TD YD + +RL L+ QFP L D P Sbjct: 1 MTEQEAKKEIDRLVELLQRADYEYYVLGRPHLTDQEYDSLFDRLKTLEAQFPHLKRADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|303250616|ref|ZP_07336813.1| NAD-dependent DNA ligase LigA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252937|ref|ZP_07534825.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650604|gb|EFL80763.1| NAD-dependent DNA ligase LigA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859575|gb|EFM91600.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 682 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L + ++ +Y+ LD+PL D YDR+ L L+ Q PE D P VG Sbjct: 16 AQLEALRQKLREYEYYYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITADSPTQRVG 73 >gi|77747612|ref|NP_299833.2| NAD-dependent DNA ligase LigA [Xylella fastidiosa 9a5c] gi|166216281|sp|Q9PAG2|DNLJ_XYLFA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 831 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L + E+ ++ A +H Y+ LD P D YDR+ LDAL+ +P+L D P Sbjct: 4 LDPAQRAAELRCRLQEANYH---YHVLDQPRIPDADYDRMLRELDALEAAYPDLATPDSP 60 Query: 114 WNTVGY 119 VG+ Sbjct: 61 TQRVGH 66 >gi|319897423|ref|YP_004135620.1| DNA ligase, nad(+)-dependent [Haemophilus influenzae F3031] gi|317432929|emb|CBY81295.1| DNA ligase, NAD(+)-dependent [Haemophilus influenzae F3031] Length = 679 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 13 IQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 72 >gi|254804544|ref|YP_003082765.1| DNA ligase [Neisseria meningitidis alpha14] gi|254668086|emb|CBA04596.1| DNA ligase [Neisseria meningitidis alpha14] Length = 841 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALERNHPELKLPDSPTQRVG 85 >gi|9107768|gb|AAF85353.1|AE004063_2 DNA ligase [Xylella fastidiosa 9a5c] Length = 837 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L + E+ ++ A +H Y+ LD P D YDR+ LDAL+ +P+L D P Sbjct: 10 LDPAQRAAELRCRLQEANYH---YHVLDQPRIPDADYDRMLRELDALEAAYPDLATPDSP 66 Query: 114 WNTVGY 119 VG+ Sbjct: 67 TQRVGH 72 >gi|153872826|ref|ZP_02001606.1| NAD-dependent DNA ligase [Beggiatoa sp. PS] gi|152070708|gb|EDN68394.1| NAD-dependent DNA ligase [Beggiatoa sp. PS] Length = 670 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + + L +YY LD+P D YD++ L AL+E +P L D P V Sbjct: 6 QIQQQATQLRDTLNKQNYYYYVLDEPRIPDSEYDKLMRELHALEENYPALITADSPTQRV 65 Query: 118 G 118 G Sbjct: 66 G 66 >gi|24374425|ref|NP_718468.1| DNA ligase, NAD-dependent [Shewanella oneidensis MR-1] gi|81460839|sp|Q8ED70|DNLJ_SHEON RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|24348997|gb|AAN55912.1|AE015728_1 DNA ligase, NAD-dependent [Shewanella oneidensis MR-1] Length = 689 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 32/66 (48%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +++ A ++ L + H YY D P TD YDR+ ++L L+ ++P+ D Sbjct: 17 AVTPQTAQPLMQALSQSLNEHNIRYYVDDAPSITDSEYDRLMQQLKKLEAEYPQFVLADS 76 Query: 113 PWNTVG 118 P VG Sbjct: 77 PTQRVG 82 >gi|294626370|ref|ZP_06704972.1| DNA ligase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599371|gb|EFF43506.1| DNA ligase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 833 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ L + Y+ LD+P D YD++ L+AL+ PEL D P VG+ Sbjct: 9 QRIDALRRRIEDANYRYHVLDEPQMADADYDKLMRELEALERAHPELASADSPTQRVGH 67 >gi|226310273|ref|YP_002770167.1| NAD-dependent DNA ligase [Brevibacillus brevis NBRC 100599] gi|254781268|sp|C0Z4D6|DNLJ_BREBN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|226093221|dbj|BAH41663.1| NAD-dependent DNA ligase [Brevibacillus brevis NBRC 100599] Length = 671 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + A +++ L K H + Y+ D P +D YD++ L L+ FP+L D P Sbjct: 1 MDRLTAETKIKELAKRIERHNRLYHEEDRPEISDQEYDQLMRELRELETSFPDLQSPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SLRVG 65 >gi|148826285|ref|YP_001291038.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae PittEE] gi|166215778|sp|A5UD04|DNLJ_HAEIE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|148716445|gb|ABQ98655.1| DNA ligase [Haemophilus influenzae PittEE] Length = 670 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 4 IQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|59712497|ref|YP_205273.1| NAD-dependent DNA ligase LigA [Vibrio fischeri ES114] gi|75353581|sp|Q5E3L1|DNLJ_VIBF1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|59480598|gb|AAW86385.1| DNA ligase, NAD(+)-dependent [Vibrio fischeri ES114] Length = 668 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 29/56 (51%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + +H YY D P D YDR+ ++L +++ + PEL D P VG Sbjct: 7 LDELKQQLNYHAYRYYVEDSPELPDAEYDRMMQQLLSIESEHPELVTVDSPSQRVG 62 >gi|309782142|ref|ZP_07676872.1| DNA ligase, NAD-dependent [Ralstonia sp. 5_7_47FAA] gi|308919208|gb|EFP64875.1| DNA ligase, NAD-dependent [Ralstonia sp. 5_7_47FAA] Length = 813 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 2/74 (2%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + K + S + EA +L + YY LD P D YDR+ L+AL+ + Sbjct: 1 MSKIAEPASGTTPEARA--AWLRAELNRYAHEYYVLDQPSVPDAEYDRLYRELEALEAEH 58 Query: 105 PELFDEDHPWNTVG 118 PEL D P VG Sbjct: 59 PELKTPDSPTLRVG 72 >gi|260581847|ref|ZP_05849643.1| DNA ligase, NAD-dependent [Haemophilus influenzae NT127] gi|260095040|gb|EEW78932.1| DNA ligase, NAD-dependent [Haemophilus influenzae NT127] Length = 679 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 13 IQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 72 >gi|311898479|dbj|BAJ30887.1| putative DNA ligase [Kitasatospora setae KM-6054] Length = 788 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 8/78 (10%) Query: 41 LESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +E W D E L H+ YY D P+ TD +D + L+AL Sbjct: 1 MEGWEDV--------PAEVRTRHAELATEIEEHRSRYYEQDAPVVTDAEFDALMRELEAL 52 Query: 101 QEQFPELFDEDHPWNTVG 118 + P L D P VG Sbjct: 53 EAAHPALATPDSPTRKVG 70 >gi|120602570|ref|YP_966970.1| DNA ligase, NAD-dependent [Desulfovibrio vulgaris DP4] gi|166215379|sp|A1VDM7|DNLJ2_DESVV RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 2 gi|120562799|gb|ABM28543.1| DNA ligase, NAD-dependent [Desulfovibrio vulgaris DP4] Length = 797 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 27/63 (42%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 EA L H + YY LD P +D YD + L L+ ++P L DE P Sbjct: 36 PEEARQRAAQLRADLERHNRLYYELDTPEISDAEYDVLYRELVGLERRWPALRDEASPTQ 95 Query: 116 TVG 118 VG Sbjct: 96 RVG 98 >gi|258508011|ref|YP_003170762.1| NAD-dependent DNA ligase [Lactobacillus rhamnosus GG] gi|257147938|emb|CAR86911.1| NAD-dependent DNA ligase [Lactobacillus rhamnosus GG] gi|259649339|dbj|BAI41501.1| DNA ligase [Lactobacillus rhamnosus GG] Length = 674 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 31/71 (43%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 +K + EA E+ L K + YY D P TD +YD L AL+ FP+L Sbjct: 3 SKPAAQFTLEEAEAEIAKLRKQLNQWRLEYYTKDAPTVTDNVYDDHYRDLQALEAAFPKL 62 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 63 VTPDSPTQQVG 73 >gi|148828262|ref|YP_001293015.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae PittGG] gi|166215779|sp|A5UIM6|DNLJ_HAEIG RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|148719504|gb|ABR00632.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae PittGG] Length = 670 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 4 IQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|145636448|ref|ZP_01792116.1| DNA ligase [Haemophilus influenzae PittHH] gi|145270273|gb|EDK10208.1| DNA ligase [Haemophilus influenzae PittHH] Length = 670 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 4 IQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|238026897|ref|YP_002911128.1| DNA ligase, NAD-dependent [Burkholderia glumae BGR1] gi|237876091|gb|ACR28424.1| DNA ligase, NAD-dependent [Burkholderia glumae BGR1] Length = 747 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +L + YY LD P D YDR+ L ++ + P+ D P Sbjct: 12 SQPSERAAWLRQELERANHAYYVLDQPELLDAEYDRLFRELQQIEAEHPDFITPDSPTQR 71 Query: 117 VG 118 VG Sbjct: 72 VG 73 >gi|254427631|ref|ZP_05041338.1| DNA ligase, NAD-dependent [Alcanivorax sp. DG881] gi|196193800|gb|EDX88759.1| DNA ligase, NAD-dependent [Alcanivorax sp. DG881] Length = 776 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 28/65 (43%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + + + ++L YY DDP D YDR L L+ Q+P+L D P Sbjct: 1 MPNPDIIQKAQHLRDQLNDWSYRYYVQDDPAVPDAEYDRAFRELKDLEAQYPDLITADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|189219712|ref|YP_001940353.1| NAD-dependent DNA ligase [Methylacidiphilum infernorum V4] gi|254781365|sp|B3DWU2|DNLJ_METI4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|189186570|gb|ACD83755.1| NAD-dependent DNA ligase [Methylacidiphilum infernorum V4] Length = 689 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 33/72 (45%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 KA + SL E + LVK+ + YY PL +D YD + L+ L++ PE Sbjct: 18 KAPSLDSLGYEEIKKRHDELVKLIRKYDYAYYVEAHPLVSDQEYDNLYHELETLEKLHPE 77 Query: 107 LFDEDHPWNTVG 118 L D P +G Sbjct: 78 LITPDSPTQRIG 89 >gi|260580185|ref|ZP_05848015.1| DNA ligase, NAD-dependent [Haemophilus influenzae RdAW] gi|1574651|gb|AAC22753.1| DNA ligase (lig) [Haemophilus influenzae Rd KW20] gi|260093469|gb|EEW77402.1| DNA ligase, NAD-dependent [Haemophilus influenzae RdAW] Length = 679 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 13 IQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 72 >gi|30995424|ref|NP_439257.2| NAD-dependent DNA ligase LigA [Haemophilus influenzae Rd KW20] gi|145638086|ref|ZP_01793696.1| DNA ligase [Haemophilus influenzae PittII] gi|166214918|sp|P43813|DNLJ_HAEIN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145272415|gb|EDK12322.1| DNA ligase [Haemophilus influenzae PittII] gi|309751252|gb|ADO81236.1| NAD-dependent DNA ligase [Haemophilus influenzae R2866] Length = 670 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 4 IQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|300021787|ref|YP_003754398.1| DNA ligase, NAD-dependent [Hyphomicrobium denitrificans ATCC 51888] gi|299523608|gb|ADJ22077.1| DNA ligase, NAD-dependent [Hyphomicrobium denitrificans ATCC 51888] Length = 712 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L H + YYR D P +D YD + RL L++ PEL P VG Sbjct: 23 VEDEIARLSAEIERHDELYYRNDAPEISDADYDALRRRLTQLEDAHPELKRAGSPSEKVG 82 >gi|319776649|ref|YP_004139137.1| DNA ligase, NAD(+)-dependent [Haemophilus influenzae F3047] gi|329124164|ref|ZP_08252711.1| NAD-dependent DNA ligase LigA [Haemophilus aegyptius ATCC 11116] gi|317451240|emb|CBY87473.1| DNA ligase, NAD(+)-dependent [Haemophilus influenzae F3047] gi|327467589|gb|EGF13087.1| NAD-dependent DNA ligase LigA [Haemophilus aegyptius ATCC 11116] Length = 670 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 4 IQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|229551868|ref|ZP_04440593.1| DNA ligase (NAD(+)) [Lactobacillus rhamnosus LMS2-1] gi|258539286|ref|YP_003173785.1| NAD-dependent DNA ligase [Lactobacillus rhamnosus Lc 705] gi|229314812|gb|EEN80785.1| DNA ligase (NAD(+)) [Lactobacillus rhamnosus LMS2-1] gi|257150962|emb|CAR89934.1| NAD-dependent DNA ligase [Lactobacillus rhamnosus Lc 705] Length = 674 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 31/71 (43%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 +K + EA E+ L K + YY D P TD +YD L AL+ FP+L Sbjct: 3 SKPAAQFTLEEAEAEIAKLRKQLNQWRLEYYTKDAPTVTDNVYDDHYRDLQALEAAFPKL 62 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 63 VTPDSPTQQVG 73 >gi|255657267|ref|ZP_05402676.1| DNA ligase [Clostridium difficile QCD-23m63] Length = 674 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 33/60 (55%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L++ +H + YY D P +D YD++ + L +L+E+ PEL D P N VG Sbjct: 3 IKDEINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSPTNRVG 62 >gi|255102476|ref|ZP_05331453.1| DNA ligase [Clostridium difficile QCD-63q42] Length = 674 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 33/60 (55%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L++ +H + YY D P +D YD++ + L +L+E+ PEL D P N VG Sbjct: 3 IKDEINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSPTNRVG 62 >gi|188585101|ref|YP_001916646.1| DNA ligase, NAD-dependent [Natranaerobius thermophilus JW/NM-WN-LF] gi|254781378|sp|B2A5W5|DNLJ_NATTJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|179349788|gb|ACB84058.1| DNA ligase, NAD-dependent [Natranaerobius thermophilus JW/NM-WN-LF] Length = 663 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 29/62 (46%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +VE L + +H YY LD P +D +D + L L++ +PE D P Sbjct: 3 KDIQKKVEALREKIEYHNHRYYVLDAPEISDQEFDALMNELIELEQTYPEYQSPDSPSQR 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|68057854|gb|AAX88107.1| DNA ligase [Haemophilus influenzae 86-028NP] Length = 679 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 13 IQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 72 >gi|161761269|ref|YP_248767.2| NAD-dependent DNA ligase LigA [Haemophilus influenzae 86-028NP] gi|166215835|sp|Q4QLJ0|DNLJ_HAEI8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|309973429|gb|ADO96630.1| NAD-dependent DNA ligase [Haemophilus influenzae R2846] Length = 670 Score = 95.7 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 4 IQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|169350953|ref|ZP_02867891.1| hypothetical protein CLOSPI_01730 [Clostridium spiroforme DSM 1552] gi|169292015|gb|EDS74148.1| hypothetical protein CLOSPI_01730 [Clostridium spiroforme DSM 1552] Length = 682 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + ++H YY DDP +D YD + + L AL+++ PE ED P VG Sbjct: 24 RYNELKQKIMYHNDRYYNQDDPEISDYEYDMMMQELKALEKKHPEYITEDSPTQKVG 80 >gi|254976908|ref|ZP_05273380.1| DNA ligase [Clostridium difficile QCD-66c26] gi|255308381|ref|ZP_05352552.1| DNA ligase [Clostridium difficile ATCC 43255] gi|255316048|ref|ZP_05357631.1| DNA ligase [Clostridium difficile QCD-76w55] gi|255518705|ref|ZP_05386381.1| DNA ligase [Clostridium difficile QCD-97b34] gi|255651827|ref|ZP_05398729.1| DNA ligase [Clostridium difficile QCD-37x79] gi|306521614|ref|ZP_07407961.1| DNA ligase [Clostridium difficile QCD-32g58] Length = 674 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 33/60 (55%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L++ +H + YY D P +D YD++ + L +L+E+ PEL D P N VG Sbjct: 3 VKDEINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSPTNRVG 62 >gi|328887795|emb|CAJ70206.2| DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) [Clostridium difficile] Length = 674 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 33/60 (55%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L++ +H + YY D P +D YD++ + L +L+E+ PEL D P N VG Sbjct: 3 VKDEINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSPTNRVG 62 >gi|296046585|gb|ADG86434.1| NAD-dependent DNA ligase [Francisella novicida] Length = 670 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E++ L H YY D P D YDR+ +RL L+ +P+ D P VG Sbjct: 4 IQTEMDQLTHTINQHNIRYYVDDAPSIPDAEYDRLIKRLTELERDYPQFKSVDSPTQRVG 63 >gi|195940543|ref|ZP_03085925.1| NAD-dependent DNA ligase LigA [Escherichia coli O157:H7 str. EC4024] Length = 98 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|221198328|ref|ZP_03571374.1| DNA ligase, NAD-dependent [Burkholderia multivorans CGD2M] gi|221208267|ref|ZP_03581271.1| DNA ligase, NAD-dependent [Burkholderia multivorans CGD2] gi|221171915|gb|EEE04358.1| DNA ligase, NAD-dependent [Burkholderia multivorans CGD2] gi|221182260|gb|EEE14661.1| DNA ligase, NAD-dependent [Burkholderia multivorans CGD2M] Length = 691 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 22/58 (37%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YDR+ L L+ P+L D P VG Sbjct: 15 ARAAWLRDQLERANHAYYVLDQPDLPDAEYDRLFRELQQLESDHPDLVTPDSPTQRVG 72 >gi|145630192|ref|ZP_01785974.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae R3021] gi|144984473|gb|EDJ91896.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae R3021] Length = 670 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 4 IQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|199597353|ref|ZP_03210784.1| NAD-dependent DNA ligase [Lactobacillus rhamnosus HN001] gi|199591869|gb|EDY99944.1| NAD-dependent DNA ligase [Lactobacillus rhamnosus HN001] Length = 674 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 31/71 (43%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 +K + EA EV L K + YY D P TD +YD L AL+ FP+L Sbjct: 3 SKPAAQFTLEEAEAEVAKLRKQLNQWRLEYYTKDAPTVTDNVYDDHYRDLQALEAAFPKL 62 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 63 VTPDSPTQQVG 73 >gi|167837047|ref|ZP_02463930.1| DNA ligase, NAD-dependent [Burkholderia thailandensis MSMB43] Length = 691 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +L YY LD P D YDR+ L ++ + P+L D P Sbjct: 11 SQPAKRAAWLRAELERANYAYYVLDQPDLPDAEYDRLFVELQQIEAEHPDLVTPDSPTQR 70 Query: 117 VG 118 VG Sbjct: 71 VG 72 >gi|295676829|ref|YP_003605353.1| DNA ligase, NAD-dependent [Burkholderia sp. CCGE1002] gi|295436672|gb|ADG15842.1| DNA ligase, NAD-dependent [Burkholderia sp. CCGE1002] Length = 687 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 29/68 (42%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V S + +L H YY LD P D YD++ + L+ ++ + P+L Sbjct: 6 VPSFATSAPAERAAWLRAELEHANYAYYVLDQPDLPDAEYDKLFKELERIEAEHPDLIVP 65 Query: 111 DHPWNTVG 118 D P VG Sbjct: 66 DSPTQRVG 73 >gi|221215451|ref|ZP_03588415.1| DNA ligase, NAD-dependent [Burkholderia multivorans CGD1] gi|221164635|gb|EED97117.1| DNA ligase, NAD-dependent [Burkholderia multivorans CGD1] Length = 691 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 22/58 (37%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YDR+ L L+ P+L D P VG Sbjct: 15 ARAAWLRDQLERANHAYYVLDQPDLPDAEYDRLFRELQQLESDHPDLVTPDSPTQRVG 72 >gi|294497111|ref|YP_003560811.1| DNA ligase, NAD-dependent [Bacillus megaterium QM B1551] gi|294347048|gb|ADE67377.1| DNA ligase, NAD-dependent [Bacillus megaterium QM B1551] Length = 668 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + A V+ L + + YY LD P D YD++ L ++E FPEL D P Sbjct: 1 MEFETAKSRVQELRDLLNQYGYEYYVLDQPSVPDAEYDKLMNELIEIEESFPELKTADSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 TQRIG 65 >gi|161524425|ref|YP_001579437.1| DNA ligase, NAD-dependent [Burkholderia multivorans ATCC 17616] gi|189350820|ref|YP_001946448.1| NAD-dependent DNA ligase [Burkholderia multivorans ATCC 17616] gi|254781276|sp|A9AIK9|DNLJ_BURM1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|160341854|gb|ABX14940.1| DNA ligase, NAD-dependent [Burkholderia multivorans ATCC 17616] gi|189334842|dbj|BAG43912.1| NAD-dependent DNA ligase [Burkholderia multivorans ATCC 17616] Length = 691 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 23/58 (39%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + +L YY LD P D YDR+ L L+ P+L D P VG Sbjct: 15 VRAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFRELQQLESDHPDLVTPDSPTQRVG 72 >gi|254776288|ref|ZP_05217804.1| NAD-dependent DNA ligase LigA [Mycobacterium avium subsp. avium ATCC 25291] Length = 681 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + + L + HQ YY D P+ +D +D + L AL+E+ PEL D P VG Sbjct: 2 RRQWQELAETVREHQFRYYIKDAPIISDAEFDALFNELLALEERHPELRVADSPTQLVG 60 >gi|156973609|ref|YP_001444516.1| NAD-dependent DNA ligase LigA [Vibrio harveyi ATCC BAA-1116] gi|166216277|sp|A7MT54|DNLJ_VIBHB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|156525203|gb|ABU70289.1| hypothetical protein VIBHAR_01312 [Vibrio harveyi ATCC BAA-1116] Length = 670 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +E L + +H YY D+P D YDR+ L ++ + PEL D P Sbjct: 3 ESVLQRLEELKESLHYHAVRYYVEDNPEIPDAEYDRMMRELLDIEAEHPELVTVDSPSLR 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|302537077|ref|ZP_07289419.1| DNA ligase, NAD-dependent [Streptomyces sp. C] gi|302445972|gb|EFL17788.1| DNA ligase, NAD-dependent [Streptomyces sp. C] Length = 736 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 32/59 (54%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 A + + L + H+ YY D P+ +D +D++ L+AL+EQ+PEL D P V Sbjct: 14 AREQHQLLAEQVEEHRFRYYVNDQPVVSDAEFDQLLRSLEALEEQYPELRTPDSPTQKV 72 >gi|254673676|emb|CBA09270.1| DNA ligase [Neisseria meningitidis alpha275] Length = 423 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALERNHPELKLPDSPTQRVG 85 >gi|77165170|ref|YP_343695.1| DNA ligase (NAD+) [Nitrosococcus oceani ATCC 19707] gi|254433594|ref|ZP_05047102.1| DNA ligase, NAD-dependent [Nitrosococcus oceani AFC27] gi|123730661|sp|Q3JAI1|DNLJ_NITOC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|76883484|gb|ABA58165.1| DNA ligase (NAD+) [Nitrosococcus oceani ATCC 19707] gi|207089927|gb|EDZ67198.1| DNA ligase, NAD-dependent [Nitrosococcus oceani AFC27] Length = 675 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 33/63 (52%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 A ++ L ++ ++ YY +++PL D YDR+ L AL+E +PEL D P Sbjct: 4 PAPAKERIQALKELINNYDYAYYVVNNPLVPDSEYDRLIRELQALEENYPELITLDSPTQ 63 Query: 116 TVG 118 VG Sbjct: 64 RVG 66 >gi|33151983|ref|NP_873336.1| NAD-dependent DNA ligase LigA [Haemophilus ducreyi 35000HP] gi|81423646|sp|Q7VMX7|DNLJ_HAEDU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|33148205|gb|AAP95725.1| DNA ligase [Haemophilus ducreyi 35000HP] Length = 686 Score = 95.3 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 34/66 (51%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 LS ++E L ++ Y+ L++PL D YDR+ +L +++Q+PEL D Sbjct: 8 ELSNNITPTQLEALRDQLREYEYHYHVLNNPLVPDAEYDRLINQLKNIEQQYPELITPDS 67 Query: 113 PWNTVG 118 P VG Sbjct: 68 PTQRVG 73 >gi|322513636|ref|ZP_08066733.1| NAD-dependent DNA ligase LigA [Actinobacillus ureae ATCC 25976] gi|322120561|gb|EFX92462.1| NAD-dependent DNA ligase LigA [Actinobacillus ureae ATCC 25976] Length = 681 Score = 95.3 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 5/70 (7%) Query: 54 LSKGEAMI-----EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 LS+ +A ++E L + ++ Y+ LD+PL D YDR+ L L+ Q PE Sbjct: 4 LSQMQAQADTTFAQLEALRQKLREYEYHYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWI 63 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 64 TADSPTQRVG 73 >gi|119717662|ref|YP_924627.1| DNA ligase, NAD-dependent [Nocardioides sp. JS614] gi|166216220|sp|A1SMA5|DNLJ_NOCSJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|119538323|gb|ABL82940.1| DNA ligase, NAD-dependent [Nocardioides sp. JS614] Length = 752 Score = 95.3 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E + + + YY LD P D +DR RL+AL+E+FPEL D P TVG Sbjct: 64 REEHRLIAEEIEEARWRYYVLDSPTIDDADFDRRMRRLEALEEEFPELRTPDSPTQTVG 122 >gi|241760920|ref|ZP_04759009.1| DNA ligase, NAD-dependent [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374539|gb|EER64000.1| DNA ligase, NAD-dependent [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 731 Score = 95.3 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 35/67 (52%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 LS+ +A+IE+E L + H+ Y+ D+P D YD + R +++ FP+L D Sbjct: 24 KDLSREQAVIELERLANLISHYDHLYHDKDNPAVPDSEYDALVLRNRRIEQFFPDLIRPD 83 Query: 112 HPWNTVG 118 P VG Sbjct: 84 SPSKKVG 90 >gi|218885555|ref|YP_002434876.1| DNA ligase, NAD-dependent [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|254781315|sp|B8DJT6|DNLJ_DESVM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218756509|gb|ACL07408.1| DNA ligase, NAD-dependent [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 808 Score = 95.3 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 26/55 (47%) Query: 64 EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L +H YY LDD +D YD + L ++ ++P L D P + VG Sbjct: 38 EALRDQLNYHSHRYYVLDDAEISDAEYDALFRELQDIEAEWPSLRTPDSPTHRVG 92 >gi|284053772|ref|ZP_06383982.1| NAD-dependent DNA ligase LigA [Arthrospira platensis str. Paraca] Length = 683 Score = 95.3 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E ++ L YY LD P+ DG+YDR+ L L+ Q+PEL D P V Sbjct: 11 EISQKLAQLRLTVQRASYAYYVLDAPIMEDGVYDRLYRELQELENQYPELISPDSPTQRV 70 Query: 118 G 118 G Sbjct: 71 G 71 >gi|147678862|ref|YP_001213077.1| NAD-dependent DNA ligase [Pelotomaculum thermopropionicum SI] gi|190359268|sp|A5CZ68|DNLJ_PELTS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|146274959|dbj|BAF60708.1| NAD-dependent DNA ligase [Pelotomaculum thermopropionicum SI] Length = 679 Score = 95.3 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 21/49 (42%), Positives = 25/49 (51%) Query: 70 ALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY LD P TD YDR+ L+ L++QFP L P VG Sbjct: 19 IEHHNYLYYVLDRPAITDAQYDRLMRELERLEKQFPALVTPYSPTQRVG 67 >gi|254252054|ref|ZP_04945372.1| NAD-dependent DNA ligase [Burkholderia dolosa AUO158] gi|124894663|gb|EAY68543.1| NAD-dependent DNA ligase [Burkholderia dolosa AUO158] Length = 691 Score = 95.3 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 22/58 (37%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YDR+ L L+ PEL D P VG Sbjct: 15 ARAAWLRDQLERANHAYYVLDQPDLPDAEYDRLFLELQQLEADHPELVTPDSPTQRVG 72 >gi|291569184|dbj|BAI91456.1| DNA ligase [Arthrospira platensis NIES-39] Length = 683 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 30/61 (49%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E ++ L YY LDDP+ DG+YDR+ L L+ Q+PEL D P V Sbjct: 11 EISQKLAQLRLTVQRASYAYYVLDDPIMEDGVYDRLYRELQELENQYPELISPDSPTQRV 70 Query: 118 G 118 G Sbjct: 71 G 71 >gi|260753112|ref|YP_003226005.1| DNA ligase, NAD-dependent [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552475|gb|ACV75421.1| DNA ligase, NAD-dependent [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 731 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 35/67 (52%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 LS+ +A+IE+E L + H+ Y+ D+P D YD + R +++ FP+L D Sbjct: 24 KDLSREQAVIELERLANLISHYDHLYHDKDNPAVPDSEYDALVLRNRRIEQFFPDLIRPD 83 Query: 112 HPWNTVG 118 P VG Sbjct: 84 SPSKKVG 90 >gi|229917963|ref|YP_002886609.1| DNA ligase, NAD-dependent [Exiguobacterium sp. AT1b] gi|229469392|gb|ACQ71164.1| DNA ligase, NAD-dependent [Exiguobacterium sp. AT1b] Length = 664 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 27/61 (44%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E VE L + + YY LD P D YDR+ L ++ +PEL D P V Sbjct: 2 EMAERVEELRQTLNQYGYEYYVLDRPSVPDSEYDRLMNELIQIETDYPELRTPDSPTQRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|330830678|ref|YP_004393630.1| NAD-dependent DNA ligase LigA [Aeromonas veronii B565] gi|328805814|gb|AEB51013.1| NAD-dependent DNA ligase LigA [Aeromonas veronii B565] Length = 787 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 25/58 (43%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L ++ + YY LD+P D YDR+ L AL+ PEL P VG Sbjct: 6 SRHRQLCELLTEYGHQYYVLDNPTVPDAEYDRLMRELIALEADHPELKTPASPSVRVG 63 >gi|325197886|gb|ADY93342.1| DNA ligase, NAD-dependent [Neisseria meningitidis G2136] Length = 841 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 36/83 (43%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHICRLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALELNHPELKLPDSPTQRVG 85 >gi|114563631|ref|YP_751144.1| DNA ligase, NAD-dependent [Shewanella frigidimarina NCIMB 400] gi|122299383|sp|Q080K9|DNLJ_SHEFN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|114334924|gb|ABI72306.1| DNA ligase, NAD-dependent [Shewanella frigidimarina NCIMB 400] Length = 670 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E++ L H YY D P D YDR+ +RL L+ +P+ D P VG Sbjct: 4 IQTEMDQLTHTINQHNIRYYVDDAPSIPDAEYDRLIKRLTELEGDYPQFKSVDSPTQRVG 63 >gi|94986686|ref|YP_594619.1| NAD-dependent DNA ligase [Lawsonia intracellularis PHE/MN1-00] gi|123385090|sp|Q1MRS8|DNLJ_LAWIP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|94730935|emb|CAJ54298.1| NAD-dependent DNA ligase (contains BRCT domain type II) [Lawsonia intracellularis PHE/MN1-00] Length = 682 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 30/66 (45%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 SL + V L K HH YY LDDP +D YD+ + L L+ FP L + Sbjct: 9 SLPSKKEKQRVRELRKFINHHNYLYYTLDDPEISDSEYDKAFQELLTLENTFPSLKTNNS 68 Query: 113 PWNTVG 118 P VG Sbjct: 69 PTQKVG 74 >gi|283850424|ref|ZP_06367713.1| DNA ligase, NAD-dependent [Desulfovibrio sp. FW1012B] gi|283574450|gb|EFC22421.1| DNA ligase, NAD-dependent [Desulfovibrio sp. FW1012B] Length = 697 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 27/64 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S + + L + H YY LDDP D YD + L L+ PEL D + P Sbjct: 4 SDSDPRARLAALRDLIHFHNHRYYVLDDPQIEDAAYDALYRELVTLEAAHPELADPNSPT 63 Query: 115 NTVG 118 VG Sbjct: 64 RRVG 67 >gi|91225892|ref|ZP_01260861.1| DNA ligase [Vibrio alginolyticus 12G01] gi|91189542|gb|EAS75818.1| DNA ligase [Vibrio alginolyticus 12G01] Length = 670 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +E L + +H YY D+P D YDR+ L ++ + P+L D P Sbjct: 3 ESVLQRLEELKESLHYHAVRYYVEDNPEIPDAEYDRLMRELLDIEAENPDLITVDSPSQR 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|53719773|ref|YP_108759.1| DNA ligase [Burkholderia pseudomallei K96243] gi|167816389|ref|ZP_02448069.1| DNA ligase [Burkholderia pseudomallei 91] gi|81379503|sp|Q63T07|DNLJ_BURPS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|52210187|emb|CAH36166.1| DNA ligase [Burkholderia pseudomallei K96243] Length = 691 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +L YY LD P D YDR+ L ++ + P+L D P Sbjct: 11 SQPAKRAAWLRAELERANYAYYVLDQPDLPDAEYDRLFVELQRIEAEHPDLVTPDSPTQR 70 Query: 117 VG 118 VG Sbjct: 71 VG 72 >gi|269968476|ref|ZP_06182487.1| DNA ligase [Vibrio alginolyticus 40B] gi|269826910|gb|EEZ81233.1| DNA ligase [Vibrio alginolyticus 40B] Length = 690 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +E L + +H YY D+P D YDR+ L ++ + P+L D P Sbjct: 23 ESVLQRLEELKESLHYHAVRYYVEDNPEIPDAEYDRLMRELLDIEAENPDLITVDSPSQR 82 Query: 117 VG 118 VG Sbjct: 83 VG 84 >gi|15676564|ref|NP_273708.1| DNA ligase [Neisseria meningitidis MC58] gi|161869603|ref|YP_001598770.1| DNA ligase [Neisseria meningitidis 053442] gi|304388085|ref|ZP_07370214.1| NAD-dependent DNA ligase LigA [Neisseria meningitidis ATCC 13091] gi|81784869|sp|Q9K0E3|DNLJ_NEIMB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190359266|sp|A9M2U7|DNLJ_NEIM0 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|7225892|gb|AAF41084.1| DNA ligase [Neisseria meningitidis MC58] gi|161595156|gb|ABX72816.1| DNA ligase [Neisseria meningitidis 053442] gi|304337942|gb|EFM04082.1| NAD-dependent DNA ligase LigA [Neisseria meningitidis ATCC 13091] gi|316983632|gb|EFV62613.1| DNA ligase, NAD-dependent [Neisseria meningitidis H44/76] gi|325139885|gb|EGC62416.1| DNA ligase, NAD-dependent [Neisseria meningitidis CU385] gi|325200648|gb|ADY96103.1| DNA ligase, NAD-dependent [Neisseria meningitidis H44/76] Length = 841 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 36/83 (43%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHICRLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALELNHPELKLPDSPTQRVG 85 >gi|255281707|ref|ZP_05346262.1| DNA ligase, NAD-dependent [Bryantella formatexigens DSM 14469] gi|255267774|gb|EET60979.1| DNA ligase, NAD-dependent [Bryantella formatexigens DSM 14469] Length = 674 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 32/64 (50%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + ++E L K +H YY D+P +D YD++ L +L+++ PEL + P Sbjct: 4 TVETIQQKIEELRKTLEYHSDRYYNQDNPEISDYEYDQMMLELKSLEKEHPELITPESPT 63 Query: 115 NTVG 118 VG Sbjct: 64 QHVG 67 >gi|195953269|ref|YP_002121559.1| DNA ligase, NAD-dependent [Hydrogenobaculum sp. Y04AAS1] gi|254781349|sp|B4U8X0|DNLJ_HYDS0 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|195932881|gb|ACG57581.1| DNA ligase, NAD-dependent [Hydrogenobaculum sp. Y04AAS1] Length = 700 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Query: 34 FLPNKRALESWLDKAKK--VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYD 91 F+ + + + + LSK EA+ + L ++ +H YY L+ P+ +D YD Sbjct: 6 FIDKTKEILKTYNLSPDKHPPKLSKEEAIKIINTLRELINYHDYRYYVLNQPVISDAEYD 65 Query: 92 RVSERLDALQEQFPELFDEDHPWNTV 117 + + L ++++ +P+L D V Sbjct: 66 AIYKFLKSIEDNYPDLITPDSLTQRV 91 >gi|241662937|ref|YP_002981297.1| DNA ligase [Ralstonia pickettii 12D] gi|240864964|gb|ACS62625.1| DNA ligase, NAD-dependent [Ralstonia pickettii 12D] Length = 813 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 2/74 (2%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + K + S + EA +L + YY LD P D YDR+ L+AL+ + Sbjct: 1 MRKIAEPASGTTPEARA--AWLRAELNRYAHEYYVLDQPSVPDAEYDRLYRELEALEAEH 58 Query: 105 PELFDEDHPWNTVG 118 PEL D P VG Sbjct: 59 PELKTPDSPTLRVG 72 >gi|254448715|ref|ZP_05062173.1| DNA ligase, NAD-dependent [gamma proteobacterium HTCC5015] gi|198261723|gb|EDY86010.1| DNA ligase, NAD-dependent [gamma proteobacterium HTCC5015] Length = 673 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 29/56 (51%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + H YY LD+P D YDR+ L +L+ Q+PE +D P VG Sbjct: 11 IDSLREQLHQHAHAYYVLDEPSIPDAEYDRLFRELQSLEAQYPESHSDDSPTQRVG 66 >gi|325137931|gb|EGC60506.1| DNA ligase, NAD-dependent [Neisseria meningitidis ES14902] Length = 841 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALELNHPELKLPDSPTQRVG 85 >gi|308388851|gb|ADO31171.1| DNA ligase [Neisseria meningitidis alpha710] gi|325202538|gb|ADY97992.1| DNA ligase, NAD-dependent [Neisseria meningitidis M01-240149] gi|325207712|gb|ADZ03164.1| DNA ligase, NAD-dependent [Neisseria meningitidis NZ-05/33] Length = 841 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALELNHPELKLPDSPTQRVG 85 >gi|270159993|ref|ZP_06188649.1| DNA ligase [Legionella longbeachae D-4968] gi|269988332|gb|EEZ94587.1| DNA ligase [Legionella longbeachae D-4968] Length = 671 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 27/65 (41%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + E + L + YY LD+PL D YDR L L+ Q PEL D P Sbjct: 1 MIIDEIKEQAARLKDKIRQYDYHYYVLDEPLVPDVEYDRCFRALQNLEAQHPELLTADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|145634259|ref|ZP_01789970.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae PittAA] gi|145268703|gb|EDK08696.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae PittAA] Length = 670 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 4 IQTQLDNLRKTLRQYEFEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|84686905|ref|ZP_01014789.1| DNA ligase, NAD-dependent [Maritimibacter alkaliphilus HTCC2654] gi|84665102|gb|EAQ11582.1| DNA ligase, NAD-dependent [Rhodobacterales bacterium HTCC2654] Length = 710 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 30/68 (44%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V L + A E+ L + Y+ D P +D YD R ++ +FPEL + Sbjct: 9 VEKLDEAGARAELARLADLLASANTAYHTEDAPEMSDAAYDAAKRRNAEIEARFPELKRD 68 Query: 111 DHPWNTVG 118 D P + VG Sbjct: 69 DSPTDQVG 76 >gi|325203753|gb|ADY99206.1| DNA ligase, NAD-dependent [Neisseria meningitidis M01-240355] Length = 841 Score = 94.9 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALELNHPELKLPDSPTQRVG 85 >gi|76810783|ref|YP_333980.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 1710b] gi|167720173|ref|ZP_02403409.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei DM98] gi|167911510|ref|ZP_02498601.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 112] gi|254189298|ref|ZP_04895809.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei Pasteur 52237] gi|254259109|ref|ZP_04950163.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 1710a] gi|254297202|ref|ZP_04964655.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 406e] gi|123771899|sp|Q3JR23|DNLJ_BURP1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|76580236|gb|ABA49711.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 1710b] gi|157807762|gb|EDO84932.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 406e] gi|157936977|gb|EDO92647.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei Pasteur 52237] gi|254217798|gb|EET07182.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 1710a] Length = 691 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +L YY LD P D YDR+ L ++ + P+L D P Sbjct: 11 SQPAKRAAWLRAELERANYAYYVLDQPDLPDAEYDRLFVELQRIEAEHPDLVTPDSPTQR 70 Query: 117 VG 118 VG Sbjct: 71 VG 72 >gi|126453906|ref|YP_001066758.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 1106a] gi|134277579|ref|ZP_01764294.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 305] gi|167739178|ref|ZP_02411952.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 14] gi|167824768|ref|ZP_02456239.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 9] gi|167846299|ref|ZP_02471807.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei B7210] gi|167894881|ref|ZP_02482283.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 7894] gi|167903270|ref|ZP_02490475.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei NCTC 13177] gi|167919520|ref|ZP_02506611.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei BCC215] gi|217421846|ref|ZP_03453350.1| DNA ligase (NAD(+)) [Burkholderia pseudomallei 576] gi|226198948|ref|ZP_03794511.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei Pakistan 9] gi|237812814|ref|YP_002897265.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei MSHR346] gi|242317106|ref|ZP_04816122.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 1106b] gi|254179316|ref|ZP_04885915.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 1655] gi|254198094|ref|ZP_04904516.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei S13] gi|166215566|sp|A3NWN7|DNLJ_BURP0 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|126227548|gb|ABN91088.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 1106a] gi|134251229|gb|EBA51308.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 305] gi|169654835|gb|EDS87528.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei S13] gi|184209856|gb|EDU06899.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 1655] gi|217395588|gb|EEC35606.1| DNA ligase (NAD(+)) [Burkholderia pseudomallei 576] gi|225929048|gb|EEH25072.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei Pakistan 9] gi|237506455|gb|ACQ98773.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei MSHR346] gi|242140345|gb|EES26747.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 1106b] Length = 691 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +L YY LD P D YDR+ L ++ + P+L D P Sbjct: 11 SQPAKRAAWLRAELERANYAYYVLDQPDLPDAEYDRLFVELQRIEAEHPDLVTPDSPTQR 70 Query: 117 VG 118 VG Sbjct: 71 VG 72 >gi|289165264|ref|YP_003455402.1| DNA ligase [Legionella longbeachae NSW150] gi|288858437|emb|CBJ12315.1| DNA ligase [Legionella longbeachae NSW150] Length = 671 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 27/65 (41%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + E + L + YY LD+PL D YDR L L+ Q PEL D P Sbjct: 1 MIIDEIKEQAARLKDKIRQYDYHYYVLDEPLVPDVEYDRCFRALQNLEAQHPELLTADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|167586849|ref|ZP_02379237.1| DNA ligase, NAD-dependent [Burkholderia ubonensis Bu] Length = 691 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 22/58 (37%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YDR+ L ++ PEL D P VG Sbjct: 15 ARAAWLRDQLERANHAYYVLDQPDLPDAEYDRLFLELQQIEADHPELVTPDSPTQRVG 72 >gi|116669859|ref|YP_830792.1| DNA ligase, NAD-dependent [Arthrobacter sp. FB24] gi|166215392|sp|A0JUH2|DNLJ_ARTS2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116609968|gb|ABK02692.1| DNA ligase, NAD-dependent [Arthrobacter sp. FB24] Length = 790 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 31/62 (50%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 G E E LV+ H+ YY+ D P+ +D +D + RL+ ++ PEL D P Sbjct: 49 GAVREEYENLVEEVRKHRFAYYQEDAPIISDAEFDELFRRLETIEAMHPELVANDSPTQE 108 Query: 117 VG 118 VG Sbjct: 109 VG 110 >gi|53723744|ref|YP_103200.1| DNA ligase, NAD-dependent [Burkholderia mallei ATCC 23344] gi|67639492|ref|ZP_00438344.1| DNA ligase, NAD-dependent [Burkholderia mallei GB8 horse 4] gi|121600643|ref|YP_993378.1| DNA ligase, NAD-dependent [Burkholderia mallei SAVP1] gi|124385135|ref|YP_001029185.1| DNA ligase, NAD-dependent [Burkholderia mallei NCTC 10229] gi|126450807|ref|YP_001080885.1| DNA ligase, NAD-dependent [Burkholderia mallei NCTC 10247] gi|167004074|ref|ZP_02269848.1| DNA ligase, NAD-dependent [Burkholderia mallei PRL-20] gi|254178005|ref|ZP_04884660.1| DNA ligase, NAD-dependent [Burkholderia mallei ATCC 10399] gi|254206491|ref|ZP_04912843.1| DNA ligase, NAD-dependent [Burkholderia mallei JHU] gi|254358100|ref|ZP_04974373.1| DNA ligase, NAD-dependent [Burkholderia mallei 2002721280] gi|81604820|sp|Q62JB9|DNLJ_BURMA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166215563|sp|A3MKU9|DNLJ_BURM7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166215564|sp|A2SB66|DNLJ_BURM9 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166215565|sp|A1V575|DNLJ_BURMS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|52427167|gb|AAU47760.1| DNA ligase, NAD-dependent [Burkholderia mallei ATCC 23344] gi|121229453|gb|ABM51971.1| DNA ligase, NAD-dependent [Burkholderia mallei SAVP1] gi|124293155|gb|ABN02424.1| DNA ligase (NAD(+)) [Burkholderia mallei NCTC 10229] gi|126243677|gb|ABO06770.1| DNA ligase (NAD(+)) [Burkholderia mallei NCTC 10247] gi|147753934|gb|EDK60999.1| DNA ligase, NAD-dependent [Burkholderia mallei JHU] gi|148027227|gb|EDK85248.1| DNA ligase, NAD-dependent [Burkholderia mallei 2002721280] gi|160699044|gb|EDP89014.1| DNA ligase, NAD-dependent [Burkholderia mallei ATCC 10399] gi|238520039|gb|EEP83503.1| DNA ligase, NAD-dependent [Burkholderia mallei GB8 horse 4] gi|243060513|gb|EES42699.1| DNA ligase, NAD-dependent [Burkholderia mallei PRL-20] Length = 691 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +L YY LD P D YDR+ L ++ + P+L D P Sbjct: 11 SQPAKRAAWLRAELERANYAYYVLDQPDLPDAEYDRLFVELQRIEAEHPDLVTPDSPTQR 70 Query: 117 VG 118 VG Sbjct: 71 VG 72 >gi|126441747|ref|YP_001059474.1| DNA ligase, NAD-dependent [Burkholderia pseudomallei 668] gi|166215567|sp|A3NAV3|DNLJ_BURP6 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|126221240|gb|ABN84746.1| DNA ligase (NAD(+)) [Burkholderia pseudomallei 668] Length = 691 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +L YY LD P D YDR+ L ++ + P+L D P Sbjct: 11 SQPAKRAAWLRAELERANYAYYVLDQPDLPDAEYDRLFVELQRIEAEHPDLVTPDSPTQR 70 Query: 117 VG 118 VG Sbjct: 71 VG 72 >gi|121634462|ref|YP_974707.1| DNA ligase [Neisseria meningitidis FAM18] gi|166216218|sp|A1KSS7|DNLJ_NEIMF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|120866168|emb|CAM09908.1| putative DNA ligase [Neisseria meningitidis FAM18] Length = 841 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALELNHPELKLPDSPTQRVG 85 >gi|325131881|gb|EGC54581.1| DNA ligase, NAD-dependent [Neisseria meningitidis M6190] Length = 841 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALELNHPELKLPDSPTQRVG 85 >gi|237757130|ref|ZP_04585563.1| DNA ligase, NAD-dependent [Sulfurihydrogenibium yellowstonense SS-5] gi|237690707|gb|EEP59882.1| DNA ligase, NAD-dependent [Sulfurihydrogenibium yellowstonense SS-5] Length = 490 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 12/98 (12%) Query: 20 TPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYR 79 T + K+L+ L +FL L+K EA VE L ++ H YY Sbjct: 3 TDERQKELIKLTYEFL------------KLDAKKLTKEEAKKIVEDLREVIRFHDWRYYI 50 Query: 80 LDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 L P+ +D YD++ + L ++ ++PEL D P + Sbjct: 51 LAQPVISDYEYDKLFKLLKDIENKYPELITPDSPTQRI 88 >gi|237733138|ref|ZP_04563619.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229383820|gb|EEO33911.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 664 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L L+H YY D+P TD YD + + L L+++ PE D P VG Sbjct: 5 SRYKELKATILYHNDRYYNQDNPEITDYEYDMMMQELKGLEQKHPEYITSDSPTQKVG 62 >gi|239618216|ref|YP_002941538.1| DNA ligase, NAD-dependent [Kosmotoga olearia TBF 19.5.1] gi|239507047|gb|ACR80534.1| DNA ligase, NAD-dependent [Kosmotoga olearia TBF 19.5.1] Length = 672 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 34/61 (55%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + + + L + +H YY L+DP+ TD YDR+ + L L++++PEL D P + Sbjct: 6 DVIERAKKLREELNYHAYRYYVLNDPIITDEEYDRMLKELQELEKKYPELITPDSPTQRI 65 Query: 118 G 118 G Sbjct: 66 G 66 >gi|188533249|ref|YP_001907046.1| NAD-dependent DNA ligase LigA [Erwinia tasmaniensis Et1/99] gi|254781330|sp|B2VE40|DNLJ_ERWT9 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|188028291|emb|CAO96149.1| DNA ligase [Erwinia tasmaniensis Et1/99] Length = 670 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 28/57 (49%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +L + H++ Y+ LD P D YDR+ L L+ PEL D P VG Sbjct: 7 KITHLRTLLRHYEYQYHVLDAPAVPDAEYDRLMGELRELEAAHPELLTTDSPTQRVG 63 >gi|149183793|ref|ZP_01862194.1| NAD-dependent DNA ligase LigA [Bacillus sp. SG-1] gi|148848496|gb|EDL62745.1| NAD-dependent DNA ligase LigA [Bacillus sp. SG-1] Length = 668 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + A +V L + + Y+ LD P D YDRV L A++ +FPEL D P Sbjct: 1 MDIKSAEQKVAELHNLLNQYNYEYHVLDKPSVPDAEYDRVMNELIAIETEFPELRTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|126659779|ref|ZP_01730906.1| NAD-dependent DNA ligase LigA [Cyanothece sp. CCY0110] gi|126618931|gb|EAZ89673.1| NAD-dependent DNA ligase LigA [Cyanothece sp. CCY0110] Length = 677 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 KV +L + V L + YY LDDP+ D +YD++ LD L+++ P+L Sbjct: 2 KVENLGVEQ---RVTQLRQQLQKANYAYYVLDDPIMEDAVYDQLYRELDNLEKEHPQLIT 58 Query: 110 EDHPWNTVG 118 D P VG Sbjct: 59 PDSPTQRVG 67 >gi|262394922|ref|YP_003286776.1| DNA ligase [Vibrio sp. Ex25] gi|262338516|gb|ACY52311.1| DNA ligase [Vibrio sp. Ex25] Length = 690 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +E L + +H YY D+P D YDR+ L ++ + P+L D P Sbjct: 23 ESVLQRLEELKESLHYHAVRYYVEDNPEIPDAEYDRLMRELLDIEAENPDLITVDSPSQR 82 Query: 117 VG 118 VG Sbjct: 83 VG 84 >gi|312114833|ref|YP_004012429.1| DNA ligase, NAD-dependent [Rhodomicrobium vannielii ATCC 17100] gi|311219962|gb|ADP71330.1| DNA ligase, NAD-dependent [Rhodomicrobium vannielii ATCC 17100] Length = 777 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K LS +A E + L H Y + P +D YDR+ RL+AL+ FP L Sbjct: 54 KHAEHLSAEDAKDEHDALAAEIARHDLLY-QDAAPEISDAEYDRLRLRLNALEAAFPSLI 112 Query: 109 DEDHPWNTVG 118 + P TVG Sbjct: 113 TPESPSQTVG 122 >gi|171322051|ref|ZP_02910925.1| DNA ligase, NAD-dependent [Burkholderia ambifaria MEX-5] gi|171092642|gb|EDT37943.1| DNA ligase, NAD-dependent [Burkholderia ambifaria MEX-5] Length = 691 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 23/62 (37%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +L YY LD P D YDR+ L L+ PEL D P Sbjct: 11 SQPEARAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFGELQQLETDHPELVTPDSPTQR 70 Query: 117 VG 118 VG Sbjct: 71 VG 72 >gi|317125504|ref|YP_004099616.1| DNA ligase, NAD-dependent [Intrasporangium calvum DSM 43043] gi|315589592|gb|ADU48889.1| DNA ligase, NAD-dependent [Intrasporangium calvum DSM 43043] Length = 715 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 32/71 (45%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 ++ + E E L + A Q Y+ D P +D YD + RL+AL+ Q+P L Sbjct: 7 SQAIEDAIPDEVHHEWADLAERASAAQFAYHVKDAPTISDAEYDGLIRRLNALEAQWPSL 66 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 67 RTPDSPTQKVG 77 >gi|46143448|ref|ZP_00135242.2| COG0272: NAD-dependent DNA ligase (contains BRCT domain type II) [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208768|ref|YP_001053993.1| NAD-dependent DNA ligase LigA [Actinobacillus pleuropneumoniae L20] gi|166215385|sp|A3N1V2|DNLJ_ACTP2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|126097560|gb|ABN74388.1| DNA ligase [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 683 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 3/71 (4%) Query: 51 VTSLSKGEAM---IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 ++ + + +A ++E L + ++ Y+ LD+PL D YDR+ L L+ Q PE Sbjct: 4 LSQMQEYQADTTFAQLEALRQKLREYEYHYHVLDNPLVPDAEYDRLMNELKNLEWQHPEW 63 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 64 ITVDSPTQRVG 74 >gi|291277000|ref|YP_003516772.1| DNA ligase [Helicobacter mustelae 12198] gi|290964194|emb|CBG40040.1| DNA ligase [Helicobacter mustelae 12198] Length = 669 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 K+KK TS+ K + +VE L K+A H YY LDDP+ +D YD + + +E PE Sbjct: 13 KSKKETSMEKEQYEKKVEQLKKMAYH----YYVLDDPISSDEEYDILYHEVKGYEEAHPE 68 Query: 107 LFDEDHPWNTVG 118 ED P VG Sbjct: 69 AIREDSPTQRVG 80 >gi|167756540|ref|ZP_02428667.1| hypothetical protein CLORAM_02077 [Clostridium ramosum DSM 1402] gi|167702715|gb|EDS17294.1| hypothetical protein CLORAM_02077 [Clostridium ramosum DSM 1402] Length = 664 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L L+H YY D+P TD YD + + L L+++ PE D P VG Sbjct: 5 SRYKELKATILYHNDRYYNQDNPEITDYEYDMMMQELKGLEQKHPEYITSDSPTQKVG 62 >gi|332173454|gb|AEE22708.1| DNA ligase, NAD-dependent [Glaciecola agarilytica 4H-3-7+YE-5] Length = 677 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +LS + + L+ + YY D+P D YDR+ L +++ P+L D Sbjct: 4 ALSPAQ---RLTQLINTINEYNYQYYVQDNPSVPDAEYDRLMRELLDIEKAHPDLRSPDS 60 Query: 113 PWNTVG 118 P VG Sbjct: 61 PSQKVG 66 >gi|238897965|ref|YP_002923645.1| DNA ligase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|257096312|sp|C4K4K4|DNLJ_HAMD5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|229465723|gb|ACQ67497.1| DNA ligase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 702 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + HH+ Y+ D P TD YD + E+L + Q+PEL + D P VG Sbjct: 6 EKINQLRDVLKHHEYLYHVNDAPEITDAEYDALLEKLREWESQYPELMNPDSPTQKVG 63 >gi|160934306|ref|ZP_02081693.1| hypothetical protein CLOLEP_03177 [Clostridium leptum DSM 753] gi|156866979|gb|EDO60351.1| hypothetical protein CLOLEP_03177 [Clostridium leptum DSM 753] Length = 661 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + A E L K +H K YY D+P TD YD + L+ ++ +PEL ED P Sbjct: 1 MDLENARKSAEELRKKLNYHAKKYYEEDNPEITDYEYDMMLRELEGIELAYPELVTEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|311694426|gb|ADP97299.1| NAD-dependent DNA ligase [marine bacterium HP15] Length = 678 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 54 LSKG--EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 +SK + + VE L H YY LDDP D YDR+ L L+ +PEL + Sbjct: 1 MSKATPDIIQRVEELRSAIDDHNYRYYVLDDPRVPDAEYDRLFRELQGLETDYPELASDT 60 Query: 112 HPWNTVG 118 P VG Sbjct: 61 SPTRRVG 67 >gi|91793866|ref|YP_563517.1| DNA ligase, NAD-dependent [Shewanella denitrificans OS217] gi|123165936|sp|Q12L82|DNLJ_SHEDO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|91715868|gb|ABE55794.1| DNA ligase, NAD-dependent [Shewanella denitrificans OS217] Length = 670 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ LV H YY D P TD YD++ ++L AL+ + PEL D P VG Sbjct: 4 IQLQIANLVNELNQHNIKYYVDDAPSVTDAYYDKLMQQLLALEAEHPELIQSDSPSRRVG 63 >gi|303252067|ref|ZP_07338236.1| truncated NAD-dependent DNA ligase LigA [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302649049|gb|EFL79236.1| truncated NAD-dependent DNA ligase LigA [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 451 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L + ++ +Y+ LD+PL D YDR+ L L+ Q PE D P VG Sbjct: 16 AQLEALRQKLREYEYYYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITADSPTQRVG 73 >gi|34499358|ref|NP_903573.1| DNA ligase [Chromobacterium violaceum ATCC 12472] gi|81654398|sp|Q7NR81|DNLJ_CHRVO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|34105208|gb|AAQ61564.1| DNA ligase [Chromobacterium violaceum ATCC 12472] Length = 821 Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L ++ + YY LD P D YDR+ L AL+E PEL D P VG Sbjct: 23 ELRAAELRELLNRYGHEYYVLDAPTVPDAEYDRLFRELQALEEAHPELAVSDSPTRRVG 81 >gi|254292786|ref|YP_003058809.1| DNA ligase, NAD-dependent [Hirschia baltica ATCC 49814] gi|254041317|gb|ACT58112.1| DNA ligase, NAD-dependent [Hirschia baltica ATCC 49814] Length = 792 Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 35/76 (46%) Query: 43 SWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQE 102 S L SL+ +A E L + YY D P +D YD + + L AL+ Sbjct: 5 SNLSSDSSPASLTLDQARERWEELAETIRQADSAYYEHDAPHLSDADYDALRQDLLALES 64 Query: 103 QFPELFDEDHPWNTVG 118 +FP+L +D P +VG Sbjct: 65 EFPQLVAQDSPSQSVG 80 >gi|257065343|ref|YP_003145015.1| DNA ligase, NAD-dependent [Slackia heliotrinireducens DSM 20476] gi|256792996|gb|ACV23666.1| DNA ligase, NAD-dependent [Slackia heliotrinireducens DSM 20476] Length = 708 Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 28/69 (40%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 ++ + + ++ L K HH YY D P +D +D + L L+ P+ D Sbjct: 10 DESAATVSDVKARIDALRKEIEHHTYLYYAKDAPEISDAAFDSLMRELRELELANPQYID 69 Query: 110 EDHPWNTVG 118 P VG Sbjct: 70 PTSPTQRVG 78 >gi|229542656|ref|ZP_04431716.1| DNA ligase, NAD-dependent [Bacillus coagulans 36D1] gi|229327076|gb|EEN92751.1| DNA ligase, NAD-dependent [Bacillus coagulans 36D1] Length = 668 Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 26/65 (40%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + A L K+ + YY LD P D YDR+ L ++ PEL D P Sbjct: 1 MDNHAAAARAAELRKLLNQYSYEYYVLDRPSVPDAEYDRLLRELQEIENAHPELITPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|58426627|gb|AAW75664.1| DNA ligase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 961 Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 1/80 (1%) Query: 39 RALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 RA+E + + V ++ +G + L + + YY L DP TD YD++ L Sbjct: 106 RAIELKILSGQLVETMEQG-VIERARELRRRIENADHRYYDLADPEITDAQYDQLFRELQ 164 Query: 99 ALQEQFPELFDEDHPWNTVG 118 L++++PEL D P VG Sbjct: 165 ELEQKYPELVTADSPSMRVG 184 >gi|125973550|ref|YP_001037460.1| DNA ligase, NAD-dependent [Clostridium thermocellum ATCC 27405] gi|256003369|ref|ZP_05428360.1| DNA ligase, NAD-dependent [Clostridium thermocellum DSM 2360] gi|281417755|ref|ZP_06248775.1| DNA ligase, NAD-dependent [Clostridium thermocellum JW20] gi|166215580|sp|A3DE88|DNLJ_CLOTH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|125713775|gb|ABN52267.1| DNA ligase, NAD-dependent [Clostridium thermocellum ATCC 27405] gi|255992659|gb|EEU02750.1| DNA ligase, NAD-dependent [Clostridium thermocellum DSM 2360] gi|281409157|gb|EFB39415.1| DNA ligase, NAD-dependent [Clostridium thermocellum JW20] gi|316940208|gb|ADU74242.1| DNA ligase, NAD-dependent [Clostridium thermocellum DSM 1313] Length = 663 Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + + L +I +H YY D P +D YD + L+ L+++ P+L D P + Sbjct: 2 DIEKRILELREILNYHSHKYYVEDAPEISDFEYDELYRELEKLEQERPDLITPDSPTQRI 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|190575033|ref|YP_001972878.1| NAD-dependent DNA ligase LigA [Stenotrophomonas maltophilia K279a] gi|254781423|sp|B2FKJ1|DNLJ_STRMK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190012955|emb|CAQ46587.1| putative DNA ligase [Stenotrophomonas maltophilia K279a] Length = 821 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L + + Y+ LD P D YDR+ L+AL+ + PEL D P VG Sbjct: 6 AERAEDLRRQIAQANRAYHELDAPEIPDVDYDRMVRELEALEREHPELARADSPTQQVG 64 >gi|194366356|ref|YP_002028966.1| NAD-dependent DNA ligase LigA [Stenotrophomonas maltophilia R551-3] gi|254781422|sp|B4SP88|DNLJ_STRM5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|194349160|gb|ACF52283.1| DNA ligase, NAD-dependent [Stenotrophomonas maltophilia R551-3] Length = 821 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L + + Y+ LD P D YDR+ L+AL+ + PEL D P VG Sbjct: 6 AERAEDLRRQIAQANRAYHELDAPEIPDVDYDRMVRELEALEREHPELARADSPTQQVG 64 >gi|284042834|ref|YP_003393174.1| DNA ligase, NAD-dependent [Conexibacter woesei DSM 14684] gi|283947055|gb|ADB49799.1| DNA ligase, NAD-dependent [Conexibacter woesei DSM 14684] Length = 684 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S G L + +H YY LDDP D YD + + L AL+ PEL D P Sbjct: 1 MSAGPDAQRAAVLRRELAYHGHRYYDLDDPEIGDDAYDALLDELRALEAAHPELLTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|229843861|ref|ZP_04464002.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae 6P18H1] gi|229812855|gb|EEP48543.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae 6P18H1] Length = 670 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 29/60 (48%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 4 IQTKINNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|254523079|ref|ZP_05135134.1| DNA ligase, NAD-dependent [Stenotrophomonas sp. SKA14] gi|219720670|gb|EED39195.1| DNA ligase, NAD-dependent [Stenotrophomonas sp. SKA14] Length = 821 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L + + Y+ LD P D YDR+ L+AL+ + PEL D P VG Sbjct: 6 AERAEDLRRQIAQANRAYHELDAPEIPDVDYDRMVRELEALEREHPELARADSPTQQVG 64 >gi|291538763|emb|CBL11874.1| DNA ligase, NAD-dependent [Roseburia intestinalis XB6B4] Length = 671 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ E +++ L +H YY D P +D +D + ++L L+++ PEL +D P Sbjct: 1 MTPEE---QIKELRDKINYHSDRYYNQDSPEISDYEFDMLMQQLKKLEKEHPELVTKDSP 57 Query: 114 WNTVG 118 VG Sbjct: 58 TQHVG 62 >gi|311029281|ref|ZP_07707371.1| NAD-dependent DNA ligase LigA [Bacillus sp. m3-13] Length = 668 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A V L + + Y+ LD P +D YD + + L L+++ PEL ED P Sbjct: 1 MEREQAEKRVRELHDVLNQYNYEYHVLDKPSVSDAEYDSLLQELLTLEKEHPELQTEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|332176597|gb|AEE12287.1| DNA ligase [Porphyromonas asaccharolytica DSM 20707] Length = 679 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ +E+E L H + YY + P +D YD + +RL L+ + PEL D P Sbjct: 1 MTRNNTELEIEQLRTTIEQHNRAYYLDNAPTISDADYDALMQRLLTLEAEHPELADPTSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SLRVG 65 >gi|315187042|gb|EFU20799.1| DNA ligase, NAD-dependent [Spirochaeta thermophila DSM 6578] Length = 697 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 34/65 (52%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ EA E++ LV++ YY L P TD YD + ERL L+ +FP L D P Sbjct: 1 MTEQEAKREIDRLVELLQRADYEYYVLGRPHLTDQEYDSLFERLKTLETRFPHLRRPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 IQRVG 65 >gi|291536367|emb|CBL09479.1| DNA ligase, NAD-dependent [Roseburia intestinalis M50/1] Length = 671 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ E +++ L +H YY D P +D +D + ++L L+++ PEL +D P Sbjct: 1 MTPEE---QIKELRDKINYHSDRYYNQDSPEISDYEFDMLMQQLKKLEKEHPELVTKDSP 57 Query: 114 WNTVG 118 VG Sbjct: 58 TQHVG 62 >gi|88861394|ref|ZP_01136024.1| NAD-dependent DNA ligase [Pseudoalteromonas tunicata D2] gi|88816660|gb|EAR26485.1| NAD-dependent DNA ligase [Pseudoalteromonas tunicata D2] Length = 673 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ L + YY LD+P D YDRV L AL+ Q+P+ D P Sbjct: 3 ESVLSQIAALKVQLEEYNYQYYVLDNPSVPDSEYDRVMRELIALETQYPQFLSADSPSQK 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|325127826|gb|EGC50734.1| DNA ligase, NAD-dependent [Neisseria meningitidis N1568] Length = 841 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 35/83 (42%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTDLTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PEL D P VG Sbjct: 63 ELEALELNHPELKLPDSPTQRVG 85 >gi|302337851|ref|YP_003803057.1| DNA ligase, NAD-dependent [Spirochaeta smaragdinae DSM 11293] gi|301635036|gb|ADK80463.1| DNA ligase, NAD-dependent [Spirochaeta smaragdinae DSM 11293] Length = 703 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 33/69 (47%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 K +A EV L + + + YY P +D YDR+ RL L+EQ+PEL Sbjct: 3 DEVQKQKEKATEEVRRLADLLFRYNRAYYIEGKPEVSDTEYDRLFLRLQELEEQWPELKR 62 Query: 110 EDHPWNTVG 118 ED P VG Sbjct: 63 EDSPTLRVG 71 >gi|120611505|ref|YP_971183.1| DNA ligase [Acidovorax citrulli AAC00-1] gi|166215380|sp|A1TR21|DNLJ_ACIAC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|120589969|gb|ABM33409.1| DNA ligase, NAD-dependent [Acidovorax citrulli AAC00-1] Length = 732 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 26/72 (36%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D + + + L YY LD P D YDRV + L AL+ P Sbjct: 6 DLFSAPAQEAPEDLGLRAAALRAQLHQWAHQYYVLDAPTVPDAEYDRVFQALQALETAHP 65 Query: 106 ELFDEDHPWNTV 117 EL D P V Sbjct: 66 ELVTPDSPTQRV 77 >gi|313886637|ref|ZP_07820349.1| DNA ligase (NAD+) [Porphyromonas asaccharolytica PR426713P-I] gi|312923933|gb|EFR34730.1| DNA ligase (NAD+) [Porphyromonas asaccharolytica PR426713P-I] Length = 679 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ +E+E L H + YY + P +D YD + +RL L+ + PEL D P Sbjct: 1 MTRNNTELEIEQLRTTIEQHNRAYYLDNAPTISDADYDALMQRLLTLEAEHPELADPTSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SLRVG 65 >gi|110597868|ref|ZP_01386151.1| DNA ligase, NAD-dependent [Chlorobium ferrooxidans DSM 13031] gi|110340593|gb|EAT59076.1| DNA ligase, NAD-dependent [Chlorobium ferrooxidans DSM 13031] Length = 674 Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 32/60 (53%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A E+ L + H + YY+ P +D +D + E+L AL++QFP+L D P VG Sbjct: 7 ASEEILRLRREIERHNRLYYQEAKPEISDYDFDLLLEQLVALEQQFPDLVTPDSPSQRVG 66 >gi|240145659|ref|ZP_04744260.1| DNA ligase, NAD-dependent [Roseburia intestinalis L1-82] gi|257202247|gb|EEV00532.1| DNA ligase, NAD-dependent [Roseburia intestinalis L1-82] Length = 671 Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ E +++ L +H YY D P +D +D + ++L L+++ PEL +D P Sbjct: 1 MTPEE---QIKELRDKINYHSDRYYNQDSPEISDYEFDMLMQQLKKLEKEHPELVTKDSP 57 Query: 114 WNTVG 118 VG Sbjct: 58 TQHVG 62 >gi|301633469|gb|ADK87023.1| DNA ligase (NAD(+)) [Mycoplasma pneumoniae FH] Length = 658 Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 33/58 (56%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +V+ + YY LDDPL +D YD++ ++L AL++ PEL D P VG Sbjct: 5 AQIRAIVEQLKRYDYHYYVLDDPLVSDFEYDQLYKQLQALEQAHPELIQPDSPTQRVG 62 >gi|282861257|ref|ZP_06270322.1| DNA ligase, NAD-dependent [Streptomyces sp. ACTE] gi|282563915|gb|EFB69452.1| DNA ligase, NAD-dependent [Streptomyces sp. ACTE] Length = 732 Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 30/61 (49%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 EA L + H+ YY D P+ +D +DR+ L+A++++ P+L D P Sbjct: 15 AEARERHALLSEQIEEHRFRYYVKDQPVVSDAEFDRLMRELEAVEDENPQLRTPDSPTQK 74 Query: 117 V 117 V Sbjct: 75 V 75 >gi|13508096|ref|NP_110045.1| DNA ligase [Mycoplasma pneumoniae M129] gi|2494169|sp|P78021|DNLJ_MYCPN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|1674170|gb|AAB96127.1| DNA ligase [Mycoplasma pneumoniae M129] Length = 658 Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 33/58 (56%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ +V+ + YY LDDPL +D YD++ ++L AL++ PEL D P VG Sbjct: 5 AQIRAIVEQLKRYDYHYYVLDDPLVSDFEYDQLYKQLQALEQAHPELIQPDSPTQRVG 62 >gi|134296034|ref|YP_001119769.1| DNA ligase [Burkholderia vietnamiensis G4] gi|166215568|sp|A4JF81|DNLJ_BURVG RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|134139191|gb|ABO54934.1| DNA ligase, NAD-dependent [Burkholderia vietnamiensis G4] Length = 691 Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 22/58 (37%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YDR+ L L+ PEL D P VG Sbjct: 15 ARAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFGELQQLEADHPELVTPDSPTQRVG 72 >gi|289804479|ref|ZP_06535108.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 119 Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEILDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|237745525|ref|ZP_04576005.1| DNA ligase [Oxalobacter formigenes HOxBLS] gi|229376876|gb|EEO26967.1| DNA ligase [Oxalobacter formigenes HOxBLS] Length = 685 Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 23/59 (38%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + YY LD P+ D YDRV L L+ +PEL P VG Sbjct: 16 ESRAAKLRSEIERYNYAYYVLDAPVVPDAEYDRVFRELQELEAAYPELVVPGSPTQRVG 74 >gi|291299865|ref|YP_003511143.1| DNA ligase NAD-dependent [Stackebrandtia nassauensis DSM 44728] gi|290569085|gb|ADD42050.1| DNA ligase, NAD-dependent [Stackebrandtia nassauensis DSM 44728] Length = 749 Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 27/64 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 A L H++ Y+R D P +D YD + L A++E P L +D P Sbjct: 14 DFDAARERHTKLAAEIDRHRQLYHRDDAPQISDAEYDALMRELLAIEEAHPVLATQDSPS 73 Query: 115 NTVG 118 VG Sbjct: 74 QQVG 77 >gi|145298235|ref|YP_001141076.1| NAD-dependent DNA ligase [Aeromonas salmonicida subsp. salmonicida A449] gi|166215387|sp|A4SKA6|DNLJ_AERS4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|142851007|gb|ABO89328.1| NAD-dependent DNA ligase [Aeromonas salmonicida subsp. salmonicida A449] Length = 664 Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E + L + + YY LD+P D YDR+ L A++ + PEL P Sbjct: 2 SETLSRHRQLCDLLTEYGHQYYVLDNPTVPDAEYDRLMRELIAIESEHPELKTSASPSVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|260576789|ref|ZP_05844774.1| DNA ligase, NAD-dependent [Rhodobacter sp. SW2] gi|259021041|gb|EEW24352.1| DNA ligase, NAD-dependent [Rhodobacter sp. SW2] Length = 705 Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K + L++ EA +E + L + Y++ D P TD YD + RL A++ FP+L Sbjct: 5 KAIEQLTEAEAAVEWQELARAVAQANIDYHQNDAPKLTDATYDAMKRRLAAIEVLFPQLA 64 Query: 109 DEDHPWNTVG 118 D P + VG Sbjct: 65 T-DSPTSKVG 73 >gi|319789848|ref|YP_004151481.1| DNA ligase, NAD-dependent [Thermovibrio ammonificans HB-1] gi|317114350|gb|ADU96840.1| DNA ligase, NAD-dependent [Thermovibrio ammonificans HB-1] Length = 723 Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 33/68 (48%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 LS EA E L ++ +H YY +P+ +D YD++ L+AL++ PE+ Sbjct: 28 DFKKLSTEEARELAEKLRRVIRYHDYKYYVQANPVISDYQYDKLFHALEALEKAHPEVVT 87 Query: 110 EDHPWNTV 117 D P + Sbjct: 88 PDSPTQRI 95 >gi|225849186|ref|YP_002729350.1| DNA ligase, NAD-dependent [Sulfurihydrogenibium azorense Az-Fu1] gi|254781434|sp|C1DW63|DNLJ_SULAA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|225644062|gb|ACN99112.1| DNA ligase, NAD-dependent [Sulfurihydrogenibium azorense Az-Fu1] Length = 701 Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 35/68 (51%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 + S+ + +A +E L ++ H YY L P+ +D YD++ + L ++ ++P+L Sbjct: 21 DIKSIDRKKAESIIEDLREVIRFHDWRYYVLAQPVISDYEYDKLFKLLKDIESKYPDLIT 80 Query: 110 EDHPWNTV 117 D P V Sbjct: 81 PDSPTQRV 88 >gi|301169841|emb|CBW29445.1| DNA ligase, NAD(+)-dependent [Haemophilus influenzae 10810] Length = 670 Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 29/60 (48%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD P D YDR+ +L AL+ + PE D P VG Sbjct: 4 IQTQLDNLRKTLRQYEYEYHVLDHPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|300856841|ref|YP_003781825.1| DNA ligase [Clostridium ljungdahlii DSM 13528] gi|300436956|gb|ADK16723.1| DNA ligase [Clostridium ljungdahlii DSM 13528] Length = 664 Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L KI +H YY D+P +D YD + + L ++ + PE+ D P VG Sbjct: 4 EDRYNELKKIINYHNDRYYNQDNPEVSDYEYDMLMQELKNIEREHPEVITPDSPTQHVG 62 >gi|254360665|ref|ZP_04976814.1| DNA ligase (NAD(+)) [Mannheimia haemolytica PHL213] gi|153091205|gb|EDN73210.1| DNA ligase (NAD(+)) [Mannheimia haemolytica PHL213] Length = 685 Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + ++E + + ++ Y+ LD+P D YDR+ L L+ Q PEL D P V Sbjct: 17 ELVEKIETIRQTLRQYEYEYHVLDNPSVPDAEYDRLMNELKNLEWQHPELISADSPTQRV 76 Query: 118 G 118 G Sbjct: 77 G 77 >gi|288572809|ref|ZP_06391166.1| DNA ligase, NAD-dependent [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568550|gb|EFC90107.1| DNA ligase, NAD-dependent [Dethiosulfovibrio peptidovorans DSM 11002] Length = 674 Score = 93.8 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + + E L K H + YY LD P D YDR+ L L+ + P L +D P Sbjct: 1 MVSRDILRRYESLKKEIARHDRLYYVLDSPEIDDSSYDRMMRELLELEREHPTLVSDDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SRRVG 65 >gi|228469580|ref|ZP_04054573.1| DNA ligase, NAD-dependent [Porphyromonas uenonis 60-3] gi|228308930|gb|EEK17605.1| DNA ligase, NAD-dependent [Porphyromonas uenonis 60-3] Length = 679 Score = 93.8 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ +E+E L K H + YY + P +D YD + +RL L+ + PE D P Sbjct: 1 MTPNSTELEIEQLRKTIEQHNRAYYLDNAPTISDADYDALMQRLLTLEAEHPEFADPTSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SLRVG 65 >gi|170692136|ref|ZP_02883299.1| DNA ligase, NAD-dependent [Burkholderia graminis C4D1M] gi|170142566|gb|EDT10731.1| DNA ligase, NAD-dependent [Burkholderia graminis C4D1M] Length = 693 Score = 93.8 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+L YY LD P D YD++ + L++++ + P+L D P VG Sbjct: 20 AARAEWLRAELERANYAYYVLDQPDLPDAEYDKLFKELESIEAEHPDLIVPDSPTQRVG 78 >gi|325915467|ref|ZP_08177781.1| DNA ligase, NAD-dependent [Xanthomonas vesicatoria ATCC 35937] gi|325538349|gb|EGD10031.1| DNA ligase, NAD-dependent [Xanthomonas vesicatoria ATCC 35937] Length = 833 Score = 93.8 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ L + Y+ LD+P D YDR+ L+AL+ + P L D P VG+ Sbjct: 8 AQRIDALRRRIEDANYRYHVLDEPQMADVDYDRLMRELEALEAEHPALATADSPTQRVGH 67 >gi|1816524|gb|AAB42062.1| DNA ligase [Escherichia coli] Length = 90 Score = 93.8 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L HH+ Y+ +D P D YDR+ L L+ + PEL D P Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|261392961|emb|CAX50546.1| DNA ligase (polydeoxyribonucleotide synthase [NAD+]) [Neisseria meningitidis 8013] Length = 841 Score = 93.8 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 36/83 (43%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YDR+ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDRLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PE D P VG Sbjct: 63 ELEALELNHPEFKLPDSPTQRVG 85 >gi|163731899|ref|ZP_02139346.1| DNA ligase, NAD-dependent [Roseobacter litoralis Och 149] gi|161395353|gb|EDQ19675.1| DNA ligase, NAD-dependent [Roseobacter litoralis Och 149] Length = 705 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 33/72 (45%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 + SL++ A E+ L ++ Y+ D P +D YD R AL+++FP Sbjct: 2 DFVPLDSLNEKAAEEELSRLAELLEQANTAYHTKDAPFMSDAEYDAYKRRNLALEDRFPH 61 Query: 107 LFDEDHPWNTVG 118 L D P + VG Sbjct: 62 LKRADSPTDVVG 73 >gi|17546117|ref|NP_519519.1| putative DNA ligase (polydeoxyribonucleotide synthase [NAD+]) protein [Ralstonia solanacearum GMI1000] gi|81505313|sp|Q8XZJ7|DNLJ_RALSO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|17428413|emb|CAD15100.1| putative dna ligase (polydeoxyribonucleotide synthase [nad+]) protein [Ralstonia solanacearum GMI1000] Length = 813 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 25/59 (42%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + YY LD P D YDR+ L+AL+ + PEL D P VG Sbjct: 14 ETRAAALRATLNRYAHEYYVLDQPSVPDAEYDRLYRELEALEAEHPELRTPDSPTLRVG 72 >gi|329115587|ref|ZP_08244309.1| DNA ligase [Acetobacter pomorum DM001] gi|326695015|gb|EGE46734.1| DNA ligase [Acetobacter pomorum DM001] Length = 710 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 33/67 (49%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 +++ +A E+E+L HH YYR D P +D YD + R DA+ Q P+ E+ Sbjct: 24 ATMTLQQAREELEHLAAEIAHHNAAYYRNDAPEISDAEYDALRRRYDAIVAQHPQAEPEN 83 Query: 112 HPWNTVG 118 VG Sbjct: 84 SAAQAVG 90 >gi|312878358|ref|ZP_07738269.1| DNA ligase (NAD(+)) [Caldicellulosiruptor lactoaceticus 6A] gi|311794859|gb|EFR11277.1| DNA ligase (NAD(+)) [Caldicellulosiruptor lactoaceticus 6A] Length = 259 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + +H YY D+P +D YD + L L++Q+PE D P VG Sbjct: 5 IKKRIRELVDLINYHDYKYYVEDNPEISDYEYDMLYRELVELEKQYPEYVFPDSPTQRVG 64 >gi|240013546|ref|ZP_04720459.1| putative DNA ligase [Neisseria gonorrhoeae DGI18] gi|240120618|ref|ZP_04733580.1| putative DNA ligase [Neisseria gonorrhoeae PID24-1] Length = 823 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 5 AQRIHELTDLLNRYAYEYYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 63 >gi|187928361|ref|YP_001898848.1| DNA ligase [Ralstonia pickettii 12J] gi|254781397|sp|B2UB00|DNLJ_RALPJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|187725251|gb|ACD26416.1| DNA ligase, NAD-dependent [Ralstonia pickettii 12J] Length = 817 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 2/78 (2%) Query: 41 LESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 + + A S + EA +L + YY LD P D YDR+ L+AL Sbjct: 1 MSKTEEPASGPPSKDRPEARA--AWLRAELNRYAHEYYVLDQPSVPDVEYDRLYRELEAL 58 Query: 101 QEQFPELFDEDHPWNTVG 118 + + PEL D P VG Sbjct: 59 ETEHPELKTPDSPTLRVG 76 >gi|240115079|ref|ZP_04729141.1| putative DNA ligase [Neisseria gonorrhoeae PID18] gi|240125172|ref|ZP_04738058.1| putative DNA ligase [Neisseria gonorrhoeae SK-92-679] gi|240127627|ref|ZP_04740288.1| putative DNA ligase [Neisseria gonorrhoeae SK-93-1035] Length = 823 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 5 AQRIHELTDLLNRYAYEYYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 63 >gi|153217072|ref|ZP_01950836.1| DNA ligase [Vibrio cholerae 1587] gi|124113902|gb|EAY32722.1| DNA ligase [Vibrio cholerae 1587] Length = 330 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + L K H YY D P D YDR+ L L+ PEL D P Sbjct: 2 SDVAQRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|59800688|ref|YP_207400.1| putative DNA ligase [Neisseria gonorrhoeae FA 1090] gi|75356380|sp|Q5F9Z9|DNLJ_NEIG1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|59717583|gb|AAW88988.1| putative DNA ligase [Neisseria gonorrhoeae FA 1090] Length = 823 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 5 AQRIHELTDLLNRYAYEYYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 63 >gi|268600753|ref|ZP_06134920.1| DNA ligase [Neisseria gonorrhoeae PID18] gi|268683767|ref|ZP_06150629.1| DNA ligase [Neisseria gonorrhoeae SK-92-679] gi|268686007|ref|ZP_06152869.1| DNA ligase [Neisseria gonorrhoeae SK-93-1035] gi|293399617|ref|ZP_06643770.1| DNA ligase, NAD-dependent [Neisseria gonorrhoeae F62] gi|268584884|gb|EEZ49560.1| DNA ligase [Neisseria gonorrhoeae PID18] gi|268624051|gb|EEZ56451.1| DNA ligase [Neisseria gonorrhoeae SK-92-679] gi|268626291|gb|EEZ58691.1| DNA ligase [Neisseria gonorrhoeae SK-93-1035] gi|291610186|gb|EFF39308.1| DNA ligase, NAD-dependent [Neisseria gonorrhoeae F62] Length = 829 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 11 AQRIHELTDLLNRYAYEYYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 69 >gi|261493319|ref|ZP_05989845.1| NAD-dependent DNA ligase LigA [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261310963|gb|EEY12140.1| NAD-dependent DNA ligase LigA [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 685 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + ++E + + ++ Y+ LD+P D YDR+ L L+ Q PEL D P V Sbjct: 17 ELVEKIETIRQTLRQYEYEYHVLDNPSVPDAEYDRLMNELKNLEWQHPELISADSPTQRV 76 Query: 118 G 118 G Sbjct: 77 G 77 >gi|261496584|ref|ZP_05992964.1| NAD-dependent DNA ligase LigA [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307787|gb|EEY09110.1| NAD-dependent DNA ligase LigA [Mannheimia haemolytica serotype A2 str. OVINE] Length = 685 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 31/61 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + ++E + + ++ Y+ LD+P D YDR+ L L+ Q PEL D P V Sbjct: 17 ELVEKIETIRQTLRQYEYEYHVLDNPSVPDAEYDRLMNELKNLEWQHPELISADSPTQRV 76 Query: 118 G 118 G Sbjct: 77 G 77 >gi|194097948|ref|YP_002000994.1| putative DNA ligase [Neisseria gonorrhoeae NCCP11945] gi|239998421|ref|ZP_04718345.1| putative DNA ligase [Neisseria gonorrhoeae 35/02] gi|254781380|sp|B4RJQ9|DNLJ_NEIG2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|193933238|gb|ACF29062.1| putative DNA ligase [Neisseria gonorrhoeae NCCP11945] gi|317163707|gb|ADV07248.1| putative DNA ligase [Neisseria gonorrhoeae TCDC-NG08107] Length = 823 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 5 AQRIHELTDLLNRYAYEYYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 63 >gi|296270799|ref|YP_003653431.1| NAD-dependent DNA ligase [Thermobispora bispora DSM 43833] gi|296093586|gb|ADG89538.1| DNA ligase, NAD-dependent [Thermobispora bispora DSM 43833] Length = 732 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 25/59 (42%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L ++ YY LD P +D YD + L+E++P+L D P VG Sbjct: 18 RDRHAELAELIEEANWRYYVLDSPTVSDAEYDAWMREIRELEERYPDLRTPDSPTQKVG 76 >gi|240122918|ref|ZP_04735874.1| putative DNA ligase [Neisseria gonorrhoeae PID332] Length = 823 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 5 AQRIHELTDLLNRYAYEYYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 63 >gi|323526494|ref|YP_004228647.1| NAD-dependent DNA ligase [Burkholderia sp. CCGE1001] gi|323383496|gb|ADX55587.1| DNA ligase, NAD-dependent [Burkholderia sp. CCGE1001] Length = 688 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YD++ + L++++ Q P+L D P VG Sbjct: 15 AERAAWLRAELERANYAYYVLDQPDLPDAEYDKLFKELESIEAQHPDLIVPDSPTQRVG 73 >gi|240015985|ref|ZP_04722525.1| putative DNA ligase [Neisseria gonorrhoeae FA6140] gi|240112339|ref|ZP_04726829.1| putative DNA ligase [Neisseria gonorrhoeae MS11] Length = 823 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 5 AQRIHELTDLLNRYAYEYYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 63 >gi|254468809|ref|ZP_05082215.1| DNA ligase, NAD-dependent [beta proteobacterium KB13] gi|207087619|gb|EDZ64902.1| DNA ligase, NAD-dependent [beta proteobacterium KB13] Length = 669 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 30/62 (48%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + ++ YL + H YY LDDP +D YD + L +++ PEL D P Sbjct: 3 QDIIKKISYLKSVIQEHDHCYYVLDDPQISDHEYDSLLRELKNIEDSNPELITPDSPTQR 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|126174866|ref|YP_001051015.1| DNA ligase (NAD(+)) [Shewanella baltica OS155] gi|125998071|gb|ABN62146.1| DNA ligase (NAD(+)) [Shewanella baltica OS155] Length = 145 Score = 93.8 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 30/67 (44%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ A ++ L + H YY D P TD YDR+ +RL L+ +P L D Sbjct: 12 EDVTPENASQVMQALSQPLNEHNIRYYVDDAPSITDSEYDRLMQRLLKLEALYPHLIVAD 71 Query: 112 HPWNTVG 118 P VG Sbjct: 72 SPTQRVG 78 >gi|240080125|ref|ZP_04724668.1| putative DNA ligase [Neisseria gonorrhoeae FA19] gi|240117363|ref|ZP_04731425.1| putative DNA ligase [Neisseria gonorrhoeae PID1] gi|260441105|ref|ZP_05794921.1| putative DNA ligase [Neisseria gonorrhoeae DGI2] Length = 823 Score = 93.8 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 5 AQRIHELTDLLNRYAYEYYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 63 >gi|329912476|ref|ZP_08275756.1| DNA ligase [Oxalobacteraceae bacterium IMCC9480] gi|327545605|gb|EGF30768.1| DNA ligase [Oxalobacteraceae bacterium IMCC9480] Length = 679 Score = 93.8 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD+P+ D YD + L+AL+ PEL D P VG Sbjct: 22 RHAHAYYVLDNPVIPDADYDLLFRELEALEASHPELVTADSPTRRVG 68 >gi|223986795|ref|ZP_03636777.1| hypothetical protein HOLDEFILI_04100 [Holdemania filiformis DSM 12042] gi|223961228|gb|EEF65758.1| hypothetical protein HOLDEFILI_04100 [Holdemania filiformis DSM 12042] Length = 663 Score = 93.8 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + + L + + Y+ LD P +D YD++ L L++Q PELFD + P VG Sbjct: 2 SEDRILALRRQLNQYNYEYHVLDHPTVSDAEYDQLMRELITLEQQHPELFDPNSPTQRVG 61 >gi|268681538|ref|ZP_06148400.1| DNA ligase [Neisseria gonorrhoeae PID332] gi|268621822|gb|EEZ54222.1| DNA ligase [Neisseria gonorrhoeae PID332] Length = 829 Score = 93.8 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 11 AQRIHELTDLLNRYAYEYYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 69 >gi|268594283|ref|ZP_06128450.1| DNA ligase [Neisseria gonorrhoeae 35/02] gi|268547672|gb|EEZ43090.1| DNA ligase [Neisseria gonorrhoeae 35/02] Length = 827 Score = 93.8 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 9 AQRIHELTDLLNRYAYEYYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 67 >gi|254493140|ref|ZP_05106311.1| DNA ligase [Neisseria gonorrhoeae 1291] gi|268598398|ref|ZP_06132565.1| DNA ligase [Neisseria gonorrhoeae MS11] gi|226512180|gb|EEH61525.1| DNA ligase [Neisseria gonorrhoeae 1291] gi|268582529|gb|EEZ47205.1| DNA ligase [Neisseria gonorrhoeae MS11] Length = 829 Score = 93.8 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 11 AQRIHELTDLLNRYAYEYYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 69 >gi|268596277|ref|ZP_06130444.1| DNA ligase [Neisseria gonorrhoeae FA19] gi|268603059|ref|ZP_06137226.1| DNA ligase [Neisseria gonorrhoeae PID1] gi|291044437|ref|ZP_06570146.1| DNA ligase [Neisseria gonorrhoeae DGI2] gi|268550065|gb|EEZ45084.1| DNA ligase [Neisseria gonorrhoeae FA19] gi|268587190|gb|EEZ51866.1| DNA ligase [Neisseria gonorrhoeae PID1] gi|291011331|gb|EFE03327.1| DNA ligase [Neisseria gonorrhoeae DGI2] Length = 829 Score = 93.8 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 11 AQRIHELTDLLNRYAYEYYTLDAPSIPDAEYDRLFRELEALERNHPELKLPDSPTQRVG 69 >gi|186476101|ref|YP_001857571.1| DNA ligase, NAD-dependent [Burkholderia phymatum STM815] gi|254781277|sp|B2JID1|DNLJ_BURP8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|184192560|gb|ACC70525.1| DNA ligase, NAD-dependent [Burkholderia phymatum STM815] Length = 683 Score = 93.8 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 24/59 (40%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YDR+ + L ++ + P+L D P VG Sbjct: 15 AERALWLRDELERANYAYYVLDQPDLPDAEYDRLFKELQQIESEHPDLITPDSPTQRVG 73 >gi|318059490|ref|ZP_07978213.1| NAD-dependent DNA ligase LigA [Streptomyces sp. SA3_actG] gi|318076490|ref|ZP_07983822.1| NAD-dependent DNA ligase LigA [Streptomyces sp. SA3_actF] Length = 783 Score = 93.8 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 30/62 (48%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + E + + + H+ YY D P+ +D +D + RL AL+E+ P+L D P Sbjct: 33 PADVREEHDRIAREVDEHRYRYYVNDQPVVSDAQFDELLRRLTALEEEHPQLRTPDSPTQ 92 Query: 116 TV 117 V Sbjct: 93 KV 94 >gi|254820448|ref|ZP_05225449.1| NAD-dependent DNA ligase LigA [Mycobacterium intracellulare ATCC 13950] Length = 693 Score = 93.8 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 30/61 (49%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + + L + HQ YY D P+ +D +D + L AL+E+ PEL D P V Sbjct: 12 EVRRQWQDLAEAVREHQFRYYIKDAPIISDAEFDSMFNELLALEERHPELRVADSPTQLV 71 Query: 118 G 118 G Sbjct: 72 G 72 >gi|289704853|ref|ZP_06501270.1| DNA ligase (NAD(+)) [Micrococcus luteus SK58] gi|289558349|gb|EFD51623.1| DNA ligase (NAD(+)) [Micrococcus luteus SK58] Length = 797 Score = 93.8 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 30/71 (42%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + + E E LV+ + YY+ D P +D YD + RL+ L+ PEL Sbjct: 10 QPDPQDIPAADLRAEYEDLVERVRAARTAYYQRDAPEISDAEYDALYRRLEDLEALHPEL 69 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 70 VSNDSPTQEVG 80 >gi|171914081|ref|ZP_02929551.1| DNA ligase, NAD-dependent [Verrucomicrobium spinosum DSM 4136] Length = 669 Score = 93.8 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + V +L + HH + YY+ P +D +D + L L++ P L D P VG Sbjct: 10 ASLRVAHLREEIEHHNRLYYQNAAPEISDQAFDALLRELQDLEKAHPSLITPDSPTQRVG 69 >gi|117618613|ref|YP_855770.1| DNA ligase, NAD-dependent [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166215386|sp|A0KHL9|DNLJ_AERHH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|117560020|gb|ABK36968.1| DNA ligase, NAD-dependent [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 668 Score = 93.4 bits (231), Expect = 8e-18, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + L ++ + + YY LD+P D YDR+ L L+ + PEL P Sbjct: 2 SDILSRHRQLCELLIEYGHQYYVLDNPTVPDAEYDRLMRELIVLEAEHPELKTPASPSVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|114565926|ref|YP_753080.1| DNA ligase (NAD(+)) [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122318951|sp|Q0AZZ5|DNLJ_SYNWW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|114336861|gb|ABI67709.1| DNA ligase (NAD(+)) [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 661 Score = 93.4 bits (231), Expect = 8e-18, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 30/60 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E ++ L + H YY LD PL +D YDR+ + L L+E++P+ D P V Sbjct: 2 EVSSRIKELREEMQKHDYHYYILDAPLISDSGYDRLMQELKKLEEEYPQYITADSPTQRV 61 >gi|222110866|ref|YP_002553130.1| NAD-dependent DNA ligase [Acidovorax ebreus TPSY] gi|254781316|sp|B9MIW4|DNLJ_DIAST RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|221730310|gb|ACM33130.1| DNA ligase, NAD-dependent [Acidovorax ebreus TPSY] Length = 740 Score = 93.4 bits (231), Expect = 8e-18, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 25/59 (42%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +++ L + YY D P D YDR + L AL+ +P+L D P V Sbjct: 28 VAAKIKALREQLNRWAHEYYVQDTPSVPDAEYDRAFQELQALEGAYPDLVTPDSPTQRV 86 >gi|114327083|ref|YP_744240.1| NAD-dependent DNA ligase [Granulibacter bethesdensis CGDNIH1] gi|122327935|sp|Q0BV35|DNLJ_GRABC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|114315257|gb|ABI61317.1| NAD-dependent DNA ligase [Granulibacter bethesdensis CGDNIH1] Length = 700 Score = 93.4 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 33/70 (47%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 +LS EA E+E L YYR D PL TD YD + +R ++ FP+ Sbjct: 12 TPPEALSPAEARAELERLASRIAELDDAYYRDDAPLVTDADYDALRQRNAEIERLFPDAI 71 Query: 109 DEDHPWNTVG 118 ++ P N VG Sbjct: 72 LKNSPANRVG 81 >gi|194016164|ref|ZP_03054779.1| DNA ligase, NAD-dependent [Bacillus pumilus ATCC 7061] gi|194012519|gb|EDW22086.1| DNA ligase, NAD-dependent [Bacillus pumilus ATCC 7061] Length = 668 Score = 93.4 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A +E L +I + Y+ LD P D YD L +L+E+ P+L D P Sbjct: 1 MDKEAAKRRIEELHQILNQYNYEYHTLDRPSVPDAEYDARMRELISLEEEHPDLKAADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|159897339|ref|YP_001543586.1| DNA ligase, NAD-dependent [Herpetosiphon aurantiacus ATCC 23779] gi|254781348|sp|A9AXP4|DNLJ_HERA2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|159890378|gb|ABX03458.1| DNA ligase, NAD-dependent [Herpetosiphon aurantiacus ATCC 23779] Length = 673 Score = 93.4 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + L + YY LD PL +D YD + L A++ ++PEL D P Sbjct: 5 EQTVARAASLRDELNLYNHHYYTLDAPLVSDAQYDSLLNELRAIEAEYPELRTPDSPTQR 64 Query: 117 VG 118 VG Sbjct: 65 VG 66 >gi|90408119|ref|ZP_01216289.1| DNA ligase [Psychromonas sp. CNPT3] gi|90310805|gb|EAS38920.1| DNA ligase [Psychromonas sp. CNPT3] Length = 667 Score = 93.4 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 32/60 (53%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++V+ L + + YY LD+P +D YD V ++L A++ + P L E+ P VG Sbjct: 3 IALQVKKLTEQLEEYNYQYYVLDEPSISDAQYDAVFQQLKAIESEHPHLLHENSPTQKVG 62 >gi|327475239|gb|AEA77214.1| DNA ligase [Bacillus sp. 15.4] Length = 668 Score = 93.4 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + A +V L + + Y+ LD P D YDRV L A++ +FPEL D P Sbjct: 1 MDIKSAEQKVAELHNLLNQYNYEYHVLDKPSVPDAEYDRVMNELIAIENKFPELRTADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|309812136|ref|ZP_07705894.1| DNA ligase (NAD+) [Dermacoccus sp. Ellin185] gi|308433823|gb|EFP57697.1| DNA ligase (NAD+) [Dermacoccus sp. Ellin185] Length = 770 Score = 93.4 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 26/57 (45%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + HQ YY D P +DG YD + L ++E +PEL + P VG Sbjct: 28 RAAELTEQIDGHQFAYYVKDAPTISDGEYDELLRELQGVEESYPELRSPESPTQRVG 84 >gi|319762938|ref|YP_004126875.1| DNA ligase, nad-dependent [Alicycliphilus denitrificans BC] gi|330825018|ref|YP_004388321.1| DNA ligase [Alicycliphilus denitrificans K601] gi|317117499|gb|ADU99987.1| DNA ligase, NAD-dependent [Alicycliphilus denitrificans BC] gi|329310390|gb|AEB84805.1| DNA ligase, NAD-dependent [Alicycliphilus denitrificans K601] Length = 717 Score = 93.4 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 4/71 (5%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 A V +L +VE L YY LD+P D YDRV ++L AL+ +P Sbjct: 11 PAPAVPAL----VASKVEALRAQLNQWAHEYYVLDEPSVPDAEYDRVFQQLQALEGAYPA 66 Query: 107 LFDEDHPWNTV 117 L D P V Sbjct: 67 LVTPDSPTQRV 77 >gi|254229733|ref|ZP_04923142.1| DNA ligase [Vibrio sp. Ex25] gi|151937778|gb|EDN56627.1| DNA ligase [Vibrio sp. Ex25] Length = 287 Score = 93.4 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +E L + +H YY D+P D YDR+ L ++ + P+L D P Sbjct: 23 ESVLQRLEELKESLHYHAVRYYVEDNPEIPDAEYDRLMRELLDIEAENPDLITVDSPSQR 82 Query: 117 VG 118 VG Sbjct: 83 VG 84 >gi|325681379|ref|ZP_08160905.1| DNA ligase (NAD+) [Ruminococcus albus 8] gi|324106869|gb|EGC01159.1| DNA ligase (NAD+) [Ruminococcus albus 8] Length = 665 Score = 93.4 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 28/68 (41%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + K A ++ LV +H YY D +D YD + L L+ Q+PE Sbjct: 5 IEMADKDNAKKRIDELVATLNYHAHLYYVEDRNEISDYDYDMMQNELKKLEAQYPEFIRP 64 Query: 111 DHPWNTVG 118 D P VG Sbjct: 65 DSPTQRVG 72 >gi|289663144|ref|ZP_06484725.1| NAD-dependent DNA ligase LigA [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 833 Score = 93.4 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 29/60 (48%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ L Y+ LD+P D YDR+ L+AL+ ++P+L D P VG+ Sbjct: 8 AQRIDALRSRIEDANYRYHVLDEPQMADVDYDRLMRELEALEAEYPQLASADSPTQRVGH 67 >gi|326381521|ref|ZP_08203215.1| NAD-dependent DNA ligase LigA [Gordonia neofelifaecis NRRL B-59395] gi|326199768|gb|EGD56948.1| NAD-dependent DNA ligase LigA [Gordonia neofelifaecis NRRL B-59395] Length = 692 Score = 93.4 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L + HQ YY D P+ +DG +D + RL AL+++ PEL D P VG Sbjct: 12 AREWALLAEEVRGHQFRYYVQDAPVISDGEFDTLLRRLQALEDEHPELAVADSPTKLVG 70 >gi|110833810|ref|YP_692669.1| NAD-dependent DNA ligase LigA [Alcanivorax borkumensis SK2] gi|123345666|sp|Q0VR01|DNLJ_ALCBS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|110646921|emb|CAL16397.1| DNA ligase (NAD+) [Alcanivorax borkumensis SK2] Length = 777 Score = 93.4 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 26/58 (44%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ + L YY DDP D YDRV L L+ Q+P+L D P VG Sbjct: 9 LQAQSLRDQLNDWSYRYYVQDDPAVPDAEYDRVFRALKDLEAQYPDLVTADSPTQRVG 66 >gi|317455470|pdb|3PN1|A Chain A, Novel Bacterial Nad+-Dependent Dna Ligase Inhibitors With Broad Spectrum Potency And Antibacterial Efficacy In Vivo Length = 318 Score = 93.4 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 4 IQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|325143946|gb|EGC66256.1| DNA ligase, NAD-dependent [Neisseria meningitidis M01-240013] gi|325206489|gb|ADZ01942.1| DNA ligase, NAD-dependent [Neisseria meningitidis M04-240196] Length = 841 Score = 93.4 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 36/83 (43%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PE D P VG Sbjct: 63 ELEALELNHPEFKLPDSPTQRVG 85 >gi|149911742|ref|ZP_01900348.1| NAD-dependent DNA ligase [Moritella sp. PE36] gi|149805167|gb|EDM65187.1| NAD-dependent DNA ligase [Moritella sp. PE36] Length = 482 Score = 93.4 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 K +A +++ L + YY LD+P D YDR+ L L+ +FPEL P Sbjct: 2 KEQAK-QIQTLTLQLEEYNHQYYVLDNPTVPDAEYDRLLRELKQLETEFPELALATSPTQ 60 Query: 116 TVG 118 VG Sbjct: 61 KVG 63 >gi|307729327|ref|YP_003906551.1| DNA ligase, NAD-dependent [Burkholderia sp. CCGE1003] gi|307583862|gb|ADN57260.1| DNA ligase, NAD-dependent [Burkholderia sp. CCGE1003] Length = 688 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YDR+ + L++++ + P+L D P VG Sbjct: 15 AERAAWLRTELERANYAYYVLDQPDLPDAEYDRLFKELESIEAEHPDLIVPDSPTQRVG 73 >gi|325288902|ref|YP_004265083.1| DNA ligase [Syntrophobotulus glycolicus DSM 8271] gi|324964303|gb|ADY55082.1| DNA ligase [Syntrophobotulus glycolicus DSM 8271] Length = 671 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 G+ + L YY LDDP TD YD + L ++ PE D P Sbjct: 9 GQGPERLNQLKTQIEEADYRYYVLDDPQITDKEYDLLMRELVEIEGAHPEWVSPDSPSQR 68 Query: 117 VG 118 VG Sbjct: 69 VG 70 >gi|312898543|ref|ZP_07757933.1| DNA ligase, NAD-dependent [Megasphaera micronuciformis F0359] gi|310620462|gb|EFQ04032.1| DNA ligase, NAD-dependent [Megasphaera micronuciformis F0359] Length = 672 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 29/66 (43%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A + L + + YY LD P TD YD + L+ ++ PE D P Sbjct: 1 MEQDKAYARLLELREKLDFYSYQYYTLDKPTITDYDYDMLYRELETIEGAHPEWVTADSP 60 Query: 114 WNTVGY 119 VG+ Sbjct: 61 TQRVGH 66 >gi|212634787|ref|YP_002311312.1| NAD-dependent DNA ligase [Shewanella piezotolerans WP3] gi|254781417|sp|B8CN91|DNLJ_SHEPW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|212556271|gb|ACJ28725.1| NAD-dependent DNA ligase [Shewanella piezotolerans WP3] Length = 668 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E+ L + H YY D+P D YDR+ +RL L+ Q PE D P VG Sbjct: 5 ELEILELTQQLNLHNYHYYVDDNPTIPDVEYDRLLKRLIELETQSPEFAKADSPTQRVG 63 >gi|251788438|ref|YP_003003159.1| NAD-dependent DNA ligase LigA [Dickeya zeae Ech1591] gi|247537059|gb|ACT05680.1| DNA ligase, NAD-dependent [Dickeya zeae Ech1591] Length = 682 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K+ + A ++ L + HH Y+ DDP D YD + L L+ Q P L Sbjct: 4 KRANQQNVDTARRRIKELRILIRHHDIKYHSEDDPEILDSEYDLLKRELSELEIQHPFLV 63 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 64 TSDSPTQRVG 73 >gi|295111571|emb|CBL28321.1| DNA ligase, NAD-dependent [Synergistetes bacterium SGP1] Length = 683 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 23/59 (38%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + HH + YY D P D YD + L L+ P+ D P VG Sbjct: 18 AARMAELYEELAHHARLYYDEDAPEIPDAEYDALVRELAELERAHPDRVRPDSPTRRVG 76 >gi|307692294|ref|ZP_07634531.1| DNA ligase, NAD-dependent [Ruminococcaceae bacterium D16] Length = 657 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 25/59 (42%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L K YY DDP +D YD RL+ L+ PEL D P VG Sbjct: 4 AQEILELRKELNQANFEYYVKDDPTMSDYDYDHKLRRLEELEGAHPELITPDSPTQRVG 62 >gi|254383201|ref|ZP_04998554.1| DNA ligase [Streptomyces sp. Mg1] gi|194342099|gb|EDX23065.1| DNA ligase [Streptomyces sp. Mg1] Length = 736 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 30/62 (48%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + L + H+ YY D P+ +D +D++ L+AL+EQ+P+L D P Sbjct: 14 PAAVREQHALLAEQVEEHRFRYYVNDQPVVSDAEFDQLLRSLEALEEQYPQLRTPDSPTQ 73 Query: 116 TV 117 V Sbjct: 74 KV 75 >gi|153831338|ref|ZP_01984005.1| DNA ligase [Vibrio cholerae 623-39] gi|148873180|gb|EDL71315.1| DNA ligase [Vibrio cholerae 623-39] Length = 159 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + L K H YY D P D YDR+ L L+ PEL D P Sbjct: 2 SDVAQRLTELRKTLHEHGVRYYVEDAPTIPDAEYDRLMRELLELEAAHPELMSSDSPSLR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|319937197|ref|ZP_08011604.1| DNA ligase [Coprobacillus sp. 29_1] gi|319807563|gb|EFW04156.1| DNA ligase [Coprobacillus sp. 29_1] Length = 662 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 29/58 (50%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + + K+ + YY LD+P +D YDR+ + L A++ Q PE D P VG Sbjct: 4 ERLIEIKKLLNEYNYQYYVLDNPSVSDQEYDRLMQELQAIENQHPEWLTADSPSQRVG 61 >gi|295702476|ref|YP_003595551.1| DNA ligase, NAD-dependent [Bacillus megaterium DSM 319] gi|294800135|gb|ADF37201.1| DNA ligase, NAD-dependent [Bacillus megaterium DSM 319] Length = 668 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + A V+ L + + YY LD P D YD++ L +++ FPEL D P Sbjct: 1 MEFETAKSRVQELRDLLNQYGYEYYVLDQPSVPDAEYDKLMNELIEIEDSFPELKTADSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 TQRIG 65 >gi|209695779|ref|YP_002263709.1| NAD-dependent DNA ligase LigA [Aliivibrio salmonicida LFI1238] gi|254781250|sp|B6EJQ6|DNLJ_ALISL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|208009732|emb|CAQ80037.1| NAD-dependent DNA ligase [Aliivibrio salmonicida LFI1238] Length = 669 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L K +H YY D P D YDR+ ++L ++++ PE D P VG Sbjct: 7 LDELKKQLNYHAYRYYVEDSPELPDAEYDRMMQQLLLIEKEHPEFMTVDSPSQRVG 62 >gi|94676849|ref|YP_588544.1| DNA ligase, NAD-dependent [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123260587|sp|Q1LU20|DNLJ_BAUCH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|94219999|gb|ABF14158.1| DNA ligase, NAD-dependent [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 671 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +E L + + YY D P +D YD + +L L+ Q+P+L D P Sbjct: 2 KQIEQYIEQLRQQLRYWNFLYYAKDAPEVSDVEYDWLMMKLRELERQWPDLKTADSPTQH 61 Query: 117 VGY 119 +GY Sbjct: 62 IGY 64 >gi|157691416|ref|YP_001485878.1| NAD-dependent DNA ligase LigA [Bacillus pumilus SAFR-032] gi|190359234|sp|A8FAQ1|DNLJ_BACP2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157680174|gb|ABV61318.1| DNA ligase (NAD(+)) [Bacillus pumilus SAFR-032] Length = 668 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A +E L +I + Y+ LD P D YD L +L+E+ P+L D P Sbjct: 1 MDKEAAKRRIEELHEILNQYNYEYHTLDRPSVPDAEYDARMRELISLEEEHPDLKAADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|239917127|ref|YP_002956685.1| DNA ligase, NAD-dependent [Micrococcus luteus NCTC 2665] gi|239838334|gb|ACS30131.1| DNA ligase, NAD-dependent [Micrococcus luteus NCTC 2665] Length = 797 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 30/71 (42%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + + E E LV+ + YY+ D P +D YD + RL+ L+ PEL Sbjct: 10 QPDPQDIPAADLREEYEDLVERVRAARTAYYQRDAPEISDAEYDALYRRLEDLEALHPEL 69 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 70 VSNDSPTQEVG 80 >gi|159028322|emb|CAO87220.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 669 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 30/61 (49%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + L YY LDDP +D +YD++ L+ +++++P+L D P V Sbjct: 6 EIQQRCQQLKTELQRASYAYYVLDDPFISDSVYDQLYRELEDIEKRYPQLITPDSPTQRV 65 Query: 118 G 118 G Sbjct: 66 G 66 >gi|325133819|gb|EGC56475.1| DNA ligase, NAD-dependent [Neisseria meningitidis M13399] Length = 841 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 36/83 (43%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN + ++ + K S K A + +L + + YY LD P D YD++ Sbjct: 3 PNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFR 62 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+AL+ PE D P VG Sbjct: 63 ELEALELNHPEFKLPDSPTQRVG 85 >gi|71064896|ref|YP_263623.1| NAD dependent DNA ligase [Psychrobacter arcticus 273-4] gi|123734475|sp|Q4FUW9|DNLJ_PSYA2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|71037881|gb|AAZ18189.1| probable NAD dependent DNA ligase [Psychrobacter arcticus 273-4] Length = 691 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%) Query: 45 LDKAKKVTSLSKGEAMI-EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQ 103 +D AK + + +A++ ++ + H YY LD+P+ D YD++ L L+E+ Sbjct: 13 IDTAKPI---TNDDAIVTQMRTFIDTLKQHNYAYYVLDNPILEDSEYDQLRRSLLELEEE 69 Query: 104 FPELFDEDHPWNTVG 118 +P+L D P N VG Sbjct: 70 YPDLVQPDSPINQVG 84 >gi|84498237|ref|ZP_00997034.1| DNA ligase [Janibacter sp. HTCC2649] gi|84381737|gb|EAP97620.1| DNA ligase [Janibacter sp. HTCC2649] Length = 731 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 36/69 (52%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V + E E L + A HQ Y+ D P +DG YD++ +RL+ L++++P L Sbjct: 24 DVVAEVPDEIRHEWTDLAEQATTHQFAYHVKDSPTVSDGEYDKLMKRLNMLEDEYPSLRT 83 Query: 110 EDHPWNTVG 118 + P +VG Sbjct: 84 PESPTQSVG 92 >gi|260911472|ref|ZP_05918061.1| DNA ligase [Prevotella sp. oral taxon 472 str. F0295] gi|260634401|gb|EEX52502.1| DNA ligase [Prevotella sp. oral taxon 472 str. F0295] Length = 666 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + +E L HH YY + P +D +D + L L+ + PE++D + P V Sbjct: 2 EDIKRIEELRNQLHHHNYLYYVQNSPTLSDQEFDHLMRELQDLEAKHPEVYDPNSPTQRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|296123087|ref|YP_003630865.1| DNA ligase, NAD-dependent [Planctomyces limnophilus DSM 3776] gi|296015427|gb|ADG68666.1| DNA ligase, NAD-dependent [Planctomyces limnophilus DSM 3776] Length = 707 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 A+ + + S +A ++ L + H + YY L +D YDR+ RL ++ FPEL Sbjct: 12 ARPLPT-SADQARHLLDKLRQEIRRHDRLYYVLAQNEISDLEYDRLMARLLEVEAAFPEL 70 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 71 TTADSPSQKVG 81 >gi|81611354|sp|Q6A7A2|DNLJ_PROAC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|50840696|gb|AAT83363.1| DNA ligase [Propionibacterium acnes KPA171202] Length = 772 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 4/80 (5%) Query: 43 SWLDKAKKVTSLSKGEAMIE----VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 + +D + + L EA E L + L Q YY D P +D YDR+ L Sbjct: 32 TMVDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELK 91 Query: 99 ALQEQFPELFDEDHPWNTVG 118 +++ PEL D P VG Sbjct: 92 KVEDDHPELRTPDSPTQRVG 111 >gi|289428790|ref|ZP_06430473.1| DNA ligase (NAD(+)) [Propionibacterium acnes J165] gi|289158188|gb|EFD06408.1| DNA ligase (NAD(+)) [Propionibacterium acnes J165] Length = 753 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 4/80 (5%) Query: 43 SWLDKAKKVTSLSKGEAMIE----VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 + +D + + L EA E L + L Q YY D P +D YDR+ L Sbjct: 13 TMVDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELK 72 Query: 99 ALQEQFPELFDEDHPWNTVG 118 +++ PEL D P VG Sbjct: 73 KVEDDHPELRTPDSPTQRVG 92 >gi|229083590|ref|ZP_04215919.1| DNA ligase [Bacillus cereus Rock3-44] gi|228699722|gb|EEL52378.1| DNA ligase [Bacillus cereus Rock3-44] Length = 669 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK +A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEKAKQRIEELRDMLNACNYQYHVLDNPSVSDAEYDRDMQELIKLEAENPEFLTEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TVRVG 65 >gi|219667570|ref|YP_002458005.1| DNA ligase, NAD-dependent [Desulfitobacterium hafniense DCB-2] gi|254781313|sp|B8FP44|DNLJ_DESHD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219537830|gb|ACL19569.1| DNA ligase, NAD-dependent [Desulfitobacterium hafniense DCB-2] Length = 659 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +E L + YY LD P +D YD + + L L+++ PE D P Sbjct: 2 SDVSQRIEALREQIEEANYQYYGLDQPTLSDAEYDALLQELIRLEKEHPEFLTPDSPSQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|289426325|ref|ZP_06428068.1| DNA ligase (NAD(+)) [Propionibacterium acnes SK187] gi|295131143|ref|YP_003581806.1| DNA ligase (NAD(+)) [Propionibacterium acnes SK137] gi|289153053|gb|EFD01771.1| DNA ligase (NAD(+)) [Propionibacterium acnes SK187] gi|291375741|gb|ADD99595.1| DNA ligase (NAD(+)) [Propionibacterium acnes SK137] Length = 753 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 4/80 (5%) Query: 43 SWLDKAKKVTSLSKGEAMIE----VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 + +D + + L EA E L + L Q YY D P +D YDR+ L Sbjct: 13 TMVDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELK 72 Query: 99 ALQEQFPELFDEDHPWNTVG 118 +++ PEL D P VG Sbjct: 73 KVEDDHPELRTPDSPTQRVG 92 >gi|86157121|ref|YP_463906.1| DNA ligase, NAD-dependent [Anaeromyxobacter dehalogenans 2CP-C] gi|123723230|sp|Q2INT9|DNLJ_ANADE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|85773632|gb|ABC80469.1| DNA ligase, NAD-dependent [Anaeromyxobacter dehalogenans 2CP-C] Length = 687 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 24/52 (46%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 L + YY LD P+ D YDR+ L A++ + PEL D P V Sbjct: 13 LRERIRAADHAYYVLDQPVLADAEYDRLMHELQAIEAEHPELVTADSPTQRV 64 >gi|328542977|ref|YP_004303086.1| DNA ligase, NAD(+)-dependent [Polymorphum gilvum SL003B-26A1] gi|326412723|gb|ADZ69786.1| DNA ligase, NAD(+)-dependent [Polymorphum gilvum SL003B-26A1] Length = 721 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 37/71 (52%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 A V SLS+ EA E+ L H + Y+ D P +D YD + R A++E+FP+L Sbjct: 7 AAAVESLSRQEAEAELARLAAEIAAHDQRYFAEDAPTVSDAEYDALRRRNAAIEERFPDL 66 Query: 108 FDEDHPWNTVG 118 ED P +G Sbjct: 67 VREDSPSARIG 77 >gi|228995667|ref|ZP_04155330.1| DNA ligase [Bacillus mycoides Rock3-17] gi|228764044|gb|EEM12928.1| DNA ligase [Bacillus mycoides Rock3-17] Length = 669 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK EA +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEEAKQRIEELRDMLNAFNYQYHVLDNPSVSDAEYDRDMQELIKLEAENPEFLIEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TVRVG 65 >gi|229003296|ref|ZP_04161126.1| DNA ligase [Bacillus mycoides Rock1-4] gi|228757914|gb|EEM07129.1| DNA ligase [Bacillus mycoides Rock1-4] Length = 669 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK EA +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEEAKQRIEELRDMLNAFNYQYHVLDNPSVSDAEYDRDMQELIKLEAENPEFLIEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TVRVG 65 >gi|149192011|ref|ZP_01870239.1| NAD-dependent DNA ligase LigA [Vibrio shilonii AK1] gi|148834147|gb|EDL51156.1| NAD-dependent DNA ligase LigA [Vibrio shilonii AK1] Length = 667 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + + L + +H YY D P D YDR+ + L A++ + P+ D P VG Sbjct: 2 SQQRLNELKEQLHYHGVKYYVEDSPEIPDVEYDRLMQELLAIEAEHPDWVTVDSPSQRVG 61 >gi|228989472|ref|ZP_04149457.1| DNA ligase [Bacillus pseudomycoides DSM 12442] gi|228770197|gb|EEM18776.1| DNA ligase [Bacillus pseudomycoides DSM 12442] Length = 669 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK EA +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEEAKQRIEELRDMLNAFNYQYHVLDNPSVSDAEYDRDMQELIKLEAENPEFLIEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TVRVG 65 >gi|218439827|ref|YP_002378156.1| DNA ligase, NAD-dependent [Cyanothece sp. PCC 7424] gi|254781306|sp|B7K8U0|DNLJ_CYAP7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218172555|gb|ACK71288.1| DNA ligase, NAD-dependent [Cyanothece sp. PCC 7424] Length = 678 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E V+ L YY LD+P+ D +YD++ L ++ Q+PEL D P V Sbjct: 7 EIKQRVDQLRSQLQKASYAYYVLDNPIMEDVVYDQLYRELQNIETQYPELITPDSPTQRV 66 Query: 118 G 118 G Sbjct: 67 G 67 >gi|299067453|emb|CBJ38652.1| DNA ligase [Ralstonia solanacearum CMR15] Length = 813 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 24/59 (40%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 14 ETRAAALRATLNRYAHEYYVLDQPSVPDAEYDRLYRELEALEADHPELRTPDSPTLRVG 72 >gi|145627933|ref|ZP_01783734.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae 22.1-21] gi|145640788|ref|ZP_01796371.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae R3021] gi|144979708|gb|EDJ89367.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae 22.1-21] gi|145274714|gb|EDK14577.1| NAD-dependent DNA ligase LigA [Haemophilus influenzae 22.4-21] Length = 278 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K ++ Y+ LD+P D YDR+ +L AL+ + PE D P VG Sbjct: 4 IQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVG 63 >gi|209522379|ref|ZP_03270993.1| DNA ligase, NAD-dependent [Burkholderia sp. H160] gi|209497185|gb|EDZ97426.1| DNA ligase, NAD-dependent [Burkholderia sp. H160] Length = 688 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 28/70 (40%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 V + G +L YY LD P D YD++ + L+ ++ + P+L Sbjct: 4 TPVPPSATGAPADRAAWLRAELERANYAYYVLDQPDLPDAEYDKLFKELERIEAEHPDLI 63 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 64 VPDSPTQRVG 73 >gi|89896634|ref|YP_520121.1| hypothetical protein DSY3888 [Desulfitobacterium hafniense Y51] gi|122997178|sp|Q24QL5|DNLJ_DESHY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|89336082|dbj|BAE85677.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 659 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + +E L + YY LD P +D YD + + L L+++ PE D P V Sbjct: 3 DVSQRIEALREQIEEANYQYYGLDQPTLSDAEYDALLQELIRLEKEHPEFLTPDSPSQRV 62 Query: 118 G 118 G Sbjct: 63 G 63 >gi|325529285|gb|EGD06234.1| NAD-dependent DNA ligase [Burkholderia sp. TJI49] Length = 691 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 21/58 (36%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YDR+ L L+ PE D P VG Sbjct: 15 ARAAWLRDQLQQANYAYYVLDQPDLPDAEYDRLFAELQQLEADHPEFVTPDSPTQRVG 72 >gi|167563194|ref|ZP_02356110.1| DNA ligase, NAD-dependent [Burkholderia oklahomensis EO147] Length = 691 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +L YY LD P D YDR+ L ++ + P+L + P Sbjct: 11 SQPAKRAAWLRAELERANYAYYVLDQPELPDAEYDRLFVELQQVEAEHPDLVTPESPTQR 70 Query: 117 VG 118 VG Sbjct: 71 VG 72 >gi|320008426|gb|ADW03276.1| DNA ligase, NAD-dependent [Streptomyces flavogriseus ATCC 33331] Length = 731 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 E L + H+ YY D P+ D +DR L+A++ + PEL D P Sbjct: 14 PAEVRERHALLAEQIEEHRFRYYVKDQPVVDDAEFDRQMRALEAIEHEHPELRTPDSPTQ 73 Query: 116 TV 117 V Sbjct: 74 KV 75 >gi|326392616|ref|ZP_08213952.1| DNA ligase (NAD(+)) [Thermoanaerobacter ethanolicus JW 200] gi|325991342|gb|EGD49998.1| DNA ligase (NAD(+)) [Thermoanaerobacter ethanolicus JW 200] Length = 210 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 24/48 (50%) Query: 71 LHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY LD P +D YD + L L+E++PE D P VG Sbjct: 20 NYHNYRYYVLDQPEISDYEYDMLMRELIELEEKYPEFKTPDSPSQRVG 67 >gi|313834239|gb|EFS71953.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL056PA1] gi|314924752|gb|EFS88583.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL036PA3] Length = 740 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 4/78 (5%) Query: 45 LDKAKKVTSLSKGEAMIE----VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +D + + L EA E L + L Q YY D P +D YDR+ L + Sbjct: 2 VDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELKKV 61 Query: 101 QEQFPELFDEDHPWNTVG 118 ++ PEL D P VG Sbjct: 62 EDDHPELRTPDSPTQRVG 79 >gi|313822055|gb|EFS59769.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL036PA1] gi|313823710|gb|EFS61424.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL036PA2] Length = 740 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 4/78 (5%) Query: 45 LDKAKKVTSLSKGEAMIE----VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +D + + L EA E L + L Q YY D P +D YDR+ L + Sbjct: 2 VDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELKKV 61 Query: 101 QEQFPELFDEDHPWNTVG 118 ++ PEL D P VG Sbjct: 62 EDDHPELRTPDSPTQRVG 79 >gi|313763487|gb|EFS34851.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL013PA1] gi|313773641|gb|EFS39607.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL074PA1] gi|313801268|gb|EFS42519.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL110PA2] gi|313808052|gb|EFS46533.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL087PA2] gi|313811476|gb|EFS49190.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL083PA1] gi|313813500|gb|EFS51214.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL025PA1] gi|313816668|gb|EFS54382.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL059PA1] gi|313819621|gb|EFS57335.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL046PA2] gi|313826033|gb|EFS63747.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL063PA1] gi|313829503|gb|EFS67217.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL063PA2] gi|313831217|gb|EFS68931.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL007PA1] gi|313840009|gb|EFS77723.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL086PA1] gi|314914784|gb|EFS78615.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL005PA4] gi|314920694|gb|EFS84525.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL050PA3] gi|314930573|gb|EFS94404.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL067PA1] gi|314954471|gb|EFS98877.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL027PA1] gi|314961961|gb|EFT06062.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL002PA2] gi|314963768|gb|EFT07868.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL082PA1] gi|314968405|gb|EFT12503.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL037PA1] gi|314974093|gb|EFT18189.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL053PA1] gi|314976617|gb|EFT20712.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL045PA1] gi|314978931|gb|EFT23025.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL072PA2] gi|314984280|gb|EFT28372.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL005PA1] gi|314986627|gb|EFT30719.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL005PA2] gi|314990983|gb|EFT35074.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL005PA3] gi|315079616|gb|EFT51609.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL053PA2] gi|315081153|gb|EFT53129.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL078PA1] gi|315087038|gb|EFT59014.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL002PA3] gi|315089213|gb|EFT61189.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL072PA1] gi|315095437|gb|EFT67413.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL038PA1] gi|315099114|gb|EFT71090.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL059PA2] gi|315100402|gb|EFT72378.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL046PA1] gi|315109094|gb|EFT81070.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL030PA2] gi|327328505|gb|EGE70267.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL096PA2] gi|327329632|gb|EGE71388.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL096PA3] gi|327334143|gb|EGE75857.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL097PA1] gi|327444292|gb|EGE90946.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL043PA2] gi|327444828|gb|EGE91482.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL043PA1] gi|327446317|gb|EGE92971.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL013PA2] gi|327452096|gb|EGE98750.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL092PA1] gi|327454866|gb|EGF01521.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL087PA3] gi|327457850|gb|EGF04505.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL083PA2] gi|328752459|gb|EGF66075.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL020PA1] gi|328755302|gb|EGF68918.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL087PA1] gi|328758217|gb|EGF71833.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL025PA2] gi|328759940|gb|EGF73524.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL099PA1] Length = 740 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 4/78 (5%) Query: 45 LDKAKKVTSLSKGEAMIE----VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +D + + L EA E L + L Q YY D P +D YDR+ L + Sbjct: 2 VDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELKKV 61 Query: 101 QEQFPELFDEDHPWNTVG 118 ++ PEL D P VG Sbjct: 62 EDDHPELRTPDSPTQRVG 79 >gi|161621794|ref|YP_056321.2| NAD-dependent DNA ligase LigA [Propionibacterium acnes KPA171202] gi|315106904|gb|EFT78880.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL030PA1] Length = 740 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 4/78 (5%) Query: 45 LDKAKKVTSLSKGEAMIE----VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +D + + L EA E L + L Q YY D P +D YDR+ L + Sbjct: 2 VDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELKKV 61 Query: 101 QEQFPELFDEDHPWNTVG 118 ++ PEL D P VG Sbjct: 62 EDDHPELRTPDSPTQRVG 79 >gi|314919398|gb|EFS83229.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL050PA1] Length = 740 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 4/78 (5%) Query: 45 LDKAKKVTSLSKGEAMIE----VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +D + + L EA E L + L Q YY D P +D YDR+ L + Sbjct: 2 VDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELKKV 61 Query: 101 QEQFPELFDEDHPWNTVG 118 ++ PEL D P VG Sbjct: 62 EDDHPELRTPDSPTQRVG 79 >gi|148652285|ref|YP_001279378.1| DNA ligase [Psychrobacter sp. PRwf-1] gi|190359276|sp|A5WCN7|DNLJ_PSYWF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|148571369|gb|ABQ93428.1| DNA ligase, NAD-dependent [Psychrobacter sp. PRwf-1] Length = 686 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 36/73 (49%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 + A S E + ++ L+ H YY +D+P +D YD++ L L+E++P Sbjct: 4 NTADTHASAQAQEVIAKMRTLIAQVRKHNNAYYVMDEPTISDNEYDQLRLSLIELEERYP 63 Query: 106 ELFDEDHPWNTVG 118 EL D P +VG Sbjct: 64 ELTQPDSPTASVG 76 >gi|91784125|ref|YP_559331.1| NAD-dependent DNA ligase [Burkholderia xenovorans LB400] gi|123358676|sp|Q13XB0|DNLJ_BURXL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|91688079|gb|ABE31279.1| NAD-dependent DNA ligase [Burkholderia xenovorans LB400] Length = 688 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YDR+ + L++++ + P+L D P VG Sbjct: 15 AERAAWLRAELERANYAYYVLDQPDLPDAEYDRLFKELESIETEHPDLIVPDSPTQRVG 73 >gi|327475235|gb|AEA77212.1| DNA ligase [Exiguobacterium sp. EPVM] Length = 664 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 27/61 (44%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E VE + + + YY LD P D YDR+ L ++ +PEL D P V Sbjct: 2 EMAERVEAIRQKLNQYGYEYYVLDRPSVPDAEYDRLMNELIEIETDYPELRSPDSPTQRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|254440003|ref|ZP_05053497.1| DNA ligase, NAD-dependent [Octadecabacter antarcticus 307] gi|198255449|gb|EDY79763.1| DNA ligase, NAD-dependent [Octadecabacter antarcticus 307] Length = 706 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 33/74 (44%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + + +L+K EA E+ L + Y++ D P D YD + R ++ +F Sbjct: 1 MSATTSIENLTKDEAAQELARLSALLAQANAEYHQADAPRIPDADYDALKLRNAMIEARF 60 Query: 105 PELFDEDHPWNTVG 118 +L D P TVG Sbjct: 61 SDLKRRDSPSETVG 74 >gi|312880304|ref|ZP_07740104.1| DNA ligase, NAD-dependent [Aminomonas paucivorans DSM 12260] gi|310783595|gb|EFQ23993.1| DNA ligase, NAD-dependent [Aminomonas paucivorans DSM 12260] Length = 696 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 29/64 (45%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + A + L + H YY LDDP+ D YD + L +L+ P+L D D P Sbjct: 9 DRDAAASRIRELTEQIRLHDHRYYVLDDPVLPDDAYDALLRELRSLERAHPDLADPDSPT 68 Query: 115 NTVG 118 VG Sbjct: 69 GRVG 72 >gi|296158912|ref|ZP_06841740.1| DNA ligase, NAD-dependent [Burkholderia sp. Ch1-1] gi|295890787|gb|EFG70577.1| DNA ligase, NAD-dependent [Burkholderia sp. Ch1-1] Length = 688 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YDR+ + L++++ + P+L D P VG Sbjct: 15 AERAAWLRAELERANYAYYVLDQPDLPDAEYDRLFKELESIETEHPDLIVPDSPTQRVG 73 >gi|170727191|ref|YP_001761217.1| DNA ligase, NAD-dependent [Shewanella woodyi ATCC 51908] gi|254781418|sp|B1KJT5|DNLJ_SHEWM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|169812538|gb|ACA87122.1| DNA ligase, NAD-dependent [Shewanella woodyi ATCC 51908] Length = 670 Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A+ E++ L + H YY D P D YDR+ RL L+ + P L P VG Sbjct: 3 AIEEIKQLTETINEHNHSYYVEDSPSVPDAEYDRLINRLKQLEGENPHLCLPTSPTQRVG 62 >gi|313793877|gb|EFS41901.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL110PA1] Length = 740 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 4/78 (5%) Query: 45 LDKAKKVTSLSKGEAMIE----VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +D + + L EA E L + L Q YY D P +D YDR+ L + Sbjct: 2 VDDSTQGGELEASEAGAEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELKKV 61 Query: 101 QEQFPELFDEDHPWNTVG 118 ++ PEL D P VG Sbjct: 62 EDDHPELRTPDSPTQRVG 79 >gi|227432449|ref|ZP_03914436.1| NAD-dependent DNA ligase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351770|gb|EEJ42009.1| NAD-dependent DNA ligase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 680 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 35/74 (47%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 L + L+ +A E L K + + YY D PL D +YD + RL AL+E+F Sbjct: 2 LPDFTPIEKLTTQDAQQETARLQKQLVQYGTAYYEDDAPLVEDYIYDALYARLVALEEKF 61 Query: 105 PELFDEDHPWNTVG 118 P+ D P VG Sbjct: 62 PQYVIPDSPTQNVG 75 >gi|116617684|ref|YP_818055.1| NAD-dependent DNA ligase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122272115|sp|Q03YP0|DNLJ_LEUMM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116096531|gb|ABJ61682.1| NAD-dependent DNA ligase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 680 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 35/74 (47%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 L + L+ +A E L K + + YY D PL D +YD + RL AL+E+F Sbjct: 2 LPDFTPIEKLTTQDAQQETARLQKQLVQYGTAYYEDDAPLVEDYIYDALYARLVALEEKF 61 Query: 105 PELFDEDHPWNTVG 118 P+ D P VG Sbjct: 62 PQYVIPDSPTQNVG 75 >gi|121594439|ref|YP_986335.1| DNA ligase [Acidovorax sp. JS42] gi|166215384|sp|A1W7N4|DNLJ_ACISJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|120606519|gb|ABM42259.1| DNA ligase, NAD-dependent [Acidovorax sp. JS42] Length = 731 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +++ L + YY D P D YDR ++L AL+ +P+L D P V Sbjct: 19 VATKIKALREQLNRWAHEYYVQDTPSVPDAEYDRAFQQLQALEGAYPDLVTPDSPTQRV 77 >gi|314957538|gb|EFT01641.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL002PA1] Length = 724 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 EA L + L Q YY D P +D YDR+ L +++ PEL D P Sbjct: 2 AEARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELKKVEDDHPELRTPDSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|167570377|ref|ZP_02363251.1| DNA ligase, NAD-dependent [Burkholderia oklahomensis C6786] Length = 691 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +L YY LD P D YDR+ L ++ + P+L + P Sbjct: 11 SQPAKRAAWLRAELERANYAYYVLDQPELPDAEYDRLFVELQQVEAEHPDLVTPESPTQR 70 Query: 117 VG 118 VG Sbjct: 71 VG 72 >gi|119386790|ref|YP_917845.1| DNA ligase, NAD-dependent [Paracoccus denitrificans PD1222] gi|166216224|sp|A1B9F5|DNLJ_PARDP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|119377385|gb|ABL72149.1| DNA ligase, NAD-dependent [Paracoccus denitrificans PD1222] Length = 765 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 7/87 (8%) Query: 32 AKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYD 91 A+ P AL V+ L A E L + YY+ D P +D YD Sbjct: 13 AEGAPPPSAL-------PPVSGLDVKAAEAEHARLSEEVAQANLAYYQEDAPFISDAEYD 65 Query: 92 RVSERLDALQEQFPELFDEDHPWNTVG 118 RL+ ++ +FP+L P VG Sbjct: 66 ASKRRLEEIEARFPDLAHSGSPTAQVG 92 >gi|298245037|ref|ZP_06968843.1| DNA ligase, NAD-dependent [Ktedonobacter racemifer DSM 44963] gi|297552518|gb|EFH86383.1| DNA ligase, NAD-dependent [Ktedonobacter racemifer DSM 44963] Length = 700 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 26/66 (39%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 + V L Y+ LD+P +D YD++ L ++ + PEL + Sbjct: 26 QTEEERLAKRVAELRHQIEEANYQYHVLDNPTLSDAEYDQLMIELQRIEGEHPELVTPES 85 Query: 113 PWNTVG 118 P VG Sbjct: 86 PTQRVG 91 >gi|257387145|ref|YP_003176918.1| NAD-dependent DNA ligase LigA [Halomicrobium mukohataei DSM 12286] gi|257169452|gb|ACV47211.1| DNA ligase, NAD-dependent [Halomicrobium mukohataei DSM 12286] Length = 700 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%) Query: 31 EAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLY 90 EA P+ +E + + V S EA + + L + +H YY L DP+ D Y Sbjct: 6 EATPPPDNPYVEDPPTEFEPVEDFSDDEAREQAQRLREAIRYHDHRYYVLADPVIGDRAY 65 Query: 91 DRVSERLDALQEQFPELFDEDHPWNTVG 118 D + RL+AL++ F +L E P VG Sbjct: 66 DALFARLEALEDAF-DLDREASPTQRVG 92 >gi|313673736|ref|YP_004051847.1| DNA ligase, nad-dependent [Calditerrivibrio nitroreducens DSM 19672] gi|312940492|gb|ADR19684.1| DNA ligase, NAD-dependent [Calditerrivibrio nitroreducens DSM 19672] Length = 655 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 32/60 (53%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 + + LVK HH YY L+DP +D YD + ++L ++E+ PE D P VG+ Sbjct: 5 KTDYDRLVKELNHHCIRYYLLNDPAISDAKYDNLYKQLRKIEEEHPEWISPDSPTQRVGF 64 >gi|300867541|ref|ZP_07112191.1| DNA ligase [Oscillatoria sp. PCC 6506] gi|300334429|emb|CBN57361.1| DNA ligase [Oscillatoria sp. PCC 6506] Length = 690 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 28/61 (45%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E V+ L K YY LD P+ D +YDR+ L L+ Q PEL + P V Sbjct: 4 EVQQRVQQLRKQLQEASYAYYVLDTPIMPDEVYDRLYRELQELETQHPELISLESPTQRV 63 Query: 118 G 118 G Sbjct: 64 G 64 >gi|115352108|ref|YP_773947.1| DNA ligase [Burkholderia ambifaria AMMD] gi|122322835|sp|Q0BE10|DNLJ_BURCM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|115282096|gb|ABI87613.1| DNA ligase, NAD-dependent [Burkholderia ambifaria AMMD] Length = 691 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 22/58 (37%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YDR+ L L+ P+L D P VG Sbjct: 15 ARAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFGELQQLETDHPDLVTPDSPTQRVG 72 >gi|172060972|ref|YP_001808624.1| DNA ligase, NAD-dependent [Burkholderia ambifaria MC40-6] gi|254781273|sp|B1YSH2|DNLJ_BURA4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|171993489|gb|ACB64408.1| DNA ligase, NAD-dependent [Burkholderia ambifaria MC40-6] Length = 691 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 22/58 (37%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YDR+ L L+ P+L D P VG Sbjct: 15 ARAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFGELQQLETDHPDLVTPDSPTQRVG 72 >gi|304392246|ref|ZP_07374188.1| DNA ligase, NAD-dependent [Ahrensia sp. R2A130] gi|303296475|gb|EFL90833.1| DNA ligase, NAD-dependent [Ahrensia sp. R2A130] Length = 716 Score = 91.8 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 35/66 (53%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 L+ +A E+ L H Y+ D P +DG YD + +R A++E+FP+L ED Sbjct: 13 KLTDEQAAEELAALASEIAEHDARYHNDDAPTISDGAYDTLRKRNTAIEERFPDLVREDS 72 Query: 113 PWNTVG 118 P N VG Sbjct: 73 PSNNVG 78 >gi|253996456|ref|YP_003048520.1| DNA ligase, NAD-dependent [Methylotenera mobilis JLW8] gi|253983135|gb|ACT47993.1| DNA ligase, NAD-dependent [Methylotenera mobilis JLW8] Length = 677 Score = 91.8 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 27/66 (40%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 L A + V L + + YY LD P D YD++ L L++ +P L D Sbjct: 2 PDLKLSSAELRVLELRGLIARYDYEYYVLDAPSVPDSEYDKIYRELQTLEQAYPSLVVAD 61 Query: 112 HPWNTV 117 P V Sbjct: 62 SPTQRV 67 >gi|303327018|ref|ZP_07357460.1| DNA ligase, NAD-dependent [Desulfovibrio sp. 3_1_syn3] gi|302863006|gb|EFL85938.1| DNA ligase, NAD-dependent [Desulfovibrio sp. 3_1_syn3] Length = 711 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + L H Y+ LD P +D YD + L L+E++P L P Sbjct: 21 AQERERARRLSAELERHNYLYHTLDAPEISDEQYDALFRELTELEERWPGLRSPHSPTLR 80 Query: 117 VG 118 VG Sbjct: 81 VG 82 >gi|317127163|ref|YP_004093445.1| DNA ligase, NAD-dependent [Bacillus cellulosilyticus DSM 2522] gi|315472111|gb|ADU28714.1| DNA ligase, NAD-dependent [Bacillus cellulosilyticus DSM 2522] Length = 670 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++K + E++ L I + YY LD P +D YD++ L L+E +PE +D P Sbjct: 1 MAKDDIKQEIDRLTNILNDYAYHYYVLDQPKVSDAEYDQLLHELTKLEEAYPEWKRDDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SERVG 65 >gi|170703080|ref|ZP_02893902.1| DNA ligase, NAD-dependent [Burkholderia ambifaria IOP40-10] gi|170132009|gb|EDT00515.1| DNA ligase, NAD-dependent [Burkholderia ambifaria IOP40-10] Length = 691 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 22/58 (37%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YDR+ L L+ P+L D P VG Sbjct: 15 ARAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFGELQQLETDHPDLVTPDSPTQRVG 72 >gi|311113170|ref|YP_003984392.1| NAD-dependent DNA ligase LigA [Rothia dentocariosa ATCC 17931] gi|310944664|gb|ADP40958.1| NAD-dependent DNA ligase LigA [Rothia dentocariosa ATCC 17931] Length = 740 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 1/82 (1%) Query: 37 NKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSER 96 +L+ L L+ E L + YY+ D P +D YDR+ R Sbjct: 8 TPASLDRALKALDSSAELT-DTIRAEYAELTDTIRTARHDYYQEDAPTLSDAEYDRLYRR 66 Query: 97 LDALQEQFPELFDEDHPWNTVG 118 L+ ++ Q+P L D P VG Sbjct: 67 LEQIEAQYPALIANDSPTQEVG 88 >gi|166364069|ref|YP_001656342.1| DNA ligase [Microcystis aeruginosa NIES-843] gi|254781371|sp|B0JTW2|DNLJ_MICAN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166086442|dbj|BAG01150.1| DNA ligase [Microcystis aeruginosa NIES-843] Length = 669 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + L YY LDDP D +YD++ L+ +++++P+L D P V Sbjct: 6 EIQQRCQQLKTELQRASYAYYVLDDPFIPDSVYDQLYRELEDIEKRYPQLITPDSPTQRV 65 Query: 118 G 118 G Sbjct: 66 G 66 >gi|92112835|ref|YP_572763.1| DNA ligase, NAD-dependent [Chromohalobacter salexigens DSM 3043] gi|122990589|sp|Q1QZP4|DNLJ_CHRSD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|91795925|gb|ABE58064.1| DNA ligase, NAD-dependent [Chromohalobacter salexigens DSM 3043] Length = 691 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + YY DDP TD YD + L +L+ + PEL D P VG Sbjct: 8 VRERADTLHQQLDDANYQYYVEDDPRITDAEYDALLRELQSLEAEHPELKTPDSPTQRVG 67 >gi|325002847|ref|ZP_08123959.1| NAD-dependent DNA ligase LigA [Pseudonocardia sp. P1] Length = 615 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 29/67 (43%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 +S + +A L HQ YY LD P+ +DG +D + L L++ P L Sbjct: 2 SSQTDEQARERHAQLAAEVADHQFRYYVLDAPVVSDGQFDELWHELLGLEDAHPGLATPQ 61 Query: 112 HPWNTVG 118 P VG Sbjct: 62 SPTQKVG 68 >gi|313203539|ref|YP_004042196.1| DNA ligase, nad-dependent [Paludibacter propionicigenes WB4] gi|312442855|gb|ADQ79211.1| DNA ligase, NAD-dependent [Paludibacter propionicigenes WB4] Length = 676 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L + H YY P +D +D +L L+ PE FD + P VG Sbjct: 2 IKDQIESLRRELEQHNYNYYVKSAPTISDFEFDAKLRQLQELEAAHPEFFDPNSPTQRVG 61 >gi|319638552|ref|ZP_07993314.1| DNA ligase [Neisseria mucosa C102] gi|317400301|gb|EFV80960.1| DNA ligase [Neisseria mucosa C102] Length = 822 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++YL + + YY LD P D YD++ L+AL+ PEL D P VG Sbjct: 5 AQRIKYLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALERNHPELKLPDSPTQRVG 63 >gi|260363295|ref|ZP_05776162.1| DNA ligase (NAD+) [Vibrio parahaemolyticus K5030] gi|308113593|gb|EFO51133.1| DNA ligase (NAD+) [Vibrio parahaemolyticus K5030] Length = 655 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 23/49 (46%) Query: 70 ALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY D+P D YDR+ L ++ Q P+L D P VG Sbjct: 1 MHYHAVRYYVEDNPEIPDAEYDRLMRELLEIEAQHPDLVTVDSPSQRVG 49 >gi|163789388|ref|ZP_02183827.1| DNA ligase, NAD-dependent [Carnobacterium sp. AT7] gi|159875242|gb|EDP69307.1| DNA ligase, NAD-dependent [Carnobacterium sp. AT7] Length = 673 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 30/67 (44%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ A V L + + YY D P D YD++ L AL+E+FP+L D Sbjct: 2 STQDFESAKQRVFDLRTLLDKYSYEYYVKDTPSIPDADYDKLYHELVALEEEFPDLISND 61 Query: 112 HPWNTVG 118 P VG Sbjct: 62 SPTQRVG 68 >gi|254556107|ref|YP_003062524.1| DNA ligase (NAD+) [Lactobacillus plantarum JDM1] gi|300766626|ref|ZP_07076543.1| NAD-dependent DNA ligase LigA [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180104|ref|YP_003924232.1| DNA ligase (NAD+) [Lactobacillus plantarum subsp. plantarum ST-III] gi|254045034|gb|ACT61827.1| DNA ligase (NAD+) [Lactobacillus plantarum JDM1] gi|300495726|gb|EFK30877.1| NAD-dependent DNA ligase LigA [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045595|gb|ADN98138.1| DNA ligase (NAD+) [Lactobacillus plantarum subsp. plantarum ST-III] Length = 679 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 35/71 (49%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 A K +++ +A E L + ++ YY D P D +YD+ ERL L++ FP+L Sbjct: 2 ADKPNTMTVEQAADEAAALRQTLNEWRRQYYDEDAPNVEDSVYDQKYERLVELEQTFPQL 61 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 62 VTPDSPTQLVG 72 >gi|28377923|ref|NP_784815.1| DNA ligase (NAD+) [Lactobacillus plantarum WCFS1] gi|81631729|sp|Q88XQ0|DNLJ_LACPL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|28270757|emb|CAD63662.1| DNA ligase (NAD+) [Lactobacillus plantarum WCFS1] Length = 679 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 35/71 (49%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 A K +++ +A E L + ++ YY D P D +YD+ ERL L++ FP+L Sbjct: 2 ADKPNTMTVEQAADEAAALRQTLNEWRRQYYDEDAPNVEDSVYDQKYERLVELEQTFPQL 61 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 62 VTPDSPTQLVG 72 >gi|257439787|ref|ZP_05615542.1| DNA ligase, NAD-dependent [Faecalibacterium prausnitzii A2-165] gi|257197807|gb|EEU96091.1| DNA ligase, NAD-dependent [Faecalibacterium prausnitzii A2-165] Length = 209 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + +A E L I + + YY D P D YD ++ L AL+ +FP+L + P Sbjct: 1 MELEQARKRAEELRVIIERNNRLYYDQDAPELEDFEYDALTRELKALEAEFPQLVTANSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQKVG 65 >gi|163784741|ref|ZP_02179548.1| DNA ligase (NAD dependent) [Hydrogenivirga sp. 128-5-R1-1] gi|159879989|gb|EDP73686.1| DNA ligase (NAD dependent) [Hydrogenivirga sp. 128-5-R1-1] Length = 414 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 6/88 (6%) Query: 31 EAKFLPNKRALESWLDKAKKVTSL-SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGL 89 E + + R L + L +K +A + L ++ +H YY L +P+ +D Sbjct: 7 EKQLIEKTRQLLKI-----SIEDLKTKEDAEKIINDLREVIKYHDWKYYVLANPVISDYE 61 Query: 90 YDRVSERLDALQEQFPELFDEDHPWNTV 117 YD++ L ++++++PEL D P V Sbjct: 62 YDKLFHLLVSIEKKYPELITADSPTQRV 89 >gi|187924439|ref|YP_001896081.1| DNA ligase, NAD-dependent [Burkholderia phytofirmans PsJN] gi|254781278|sp|B2T5K0|DNLJ_BURPP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|187715633|gb|ACD16857.1| DNA ligase, NAD-dependent [Burkholderia phytofirmans PsJN] Length = 688 Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L YY LD P D YD++ + L++++ + P+L D P VG Sbjct: 15 AERAAWLRAELERANYAYYVLDQPDLPDAEYDKLFKELESIETEHPDLIVPDSPTQRVG 73 >gi|75906538|ref|YP_320834.1| NAD-dependent DNA ligase LigA [Anabaena variabilis ATCC 29413] gi|123745307|sp|Q3MGE7|DNLJ_ANAVT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|75700263|gb|ABA19939.1| NAD-dependent DNA ligase [Anabaena variabilis ATCC 29413] Length = 676 Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 28/58 (48%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 VE L ++ YY LD P+ D +YD++ L L+ Q PEL D P +G Sbjct: 9 KRVEELRRLLQQASYAYYVLDAPVMEDAVYDQLYRELQQLEIQHPELVTPDSPTQRIG 66 >gi|172056504|ref|YP_001812964.1| DNA ligase, NAD-dependent [Exiguobacterium sibiricum 255-15] gi|254781332|sp|B1YJ17|DNLJ_EXIS2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|171989025|gb|ACB59947.1| DNA ligase, NAD-dependent [Exiguobacterium sibiricum 255-15] Length = 664 Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 24/59 (40%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L + + YY D P D YD++ L L+ PEL D P VG Sbjct: 4 QARIEELRQKLNQYSYEYYVQDQPTVPDSTYDQLLRELTELETAHPELITPDSPTQRVG 62 >gi|332188479|ref|ZP_08390201.1| DNA ligase, NAD-dependent [Sphingomonas sp. S17] gi|332011491|gb|EGI53574.1| DNA ligase, NAD-dependent [Sphingomonas sp. S17] Length = 712 Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 24/51 (47%) Query: 68 KIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + HH + Y+ D P +D YD + R A++ FP L D P VG Sbjct: 23 REIAHHNRLYHTEDAPEISDADYDALIRRNMAIEAAFPHLIRSDSPNRQVG 73 >gi|213850350|ref|ZP_03381248.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 110 Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEILDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|23098215|ref|NP_691681.1| NAD-dependent DNA ligase LigA [Oceanobacillus iheyensis HTE831] gi|81741485|sp|Q8CXK6|DNLJ_OCEIH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|22776440|dbj|BAC12716.1| DNA ligase (polydeoxyribonucleotide synthase[NAD+]) [Oceanobacillus iheyensis HTE831] Length = 667 Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++K + ++E L+++ + YY LD+P D YD+ L L++ FP+L E+ P Sbjct: 1 MNKEQVSKKIESLIELLNQYGYEYYVLDNPTVPDAEYDQKLRELQQLEQDFPDLVMENSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|118594798|ref|ZP_01552145.1| DNA ligase, NAD-dependent [Methylophilales bacterium HTCC2181] gi|118440576|gb|EAV47203.1| DNA ligase, NAD-dependent [Methylophilales bacterium HTCC2181] Length = 671 Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L K+ H YY LD+PL +D +D++ + A+++ PEL D P VG Sbjct: 7 IKERLVDLKKLISEHNYHYYVLDNPLISDAEFDKIFLEIKAIEDLNPELITIDSPTQRVG 66 >gi|120602092|ref|YP_966492.1| DNA ligase, NAD-dependent [Desulfovibrio vulgaris DP4] gi|166215378|sp|A1VC99|DNLJ1_DESVV RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 1 gi|120562321|gb|ABM28065.1| DNA ligase, NAD-dependent [Desulfovibrio vulgaris DP4] Length = 680 Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 26/61 (42%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + +L H + YY LD P +D YD + L L+ +P L DE P V Sbjct: 6 QHQSRAAWLRAELARHNRLYYELDTPEISDAEYDTLYRELVNLETLWPALMDEASPTQRV 65 Query: 118 G 118 G Sbjct: 66 G 66 >gi|332044217|gb|EGI80411.1| DNA ligase, NAD-dependent [Lacinutrix algicola 5H-3-7-4] Length = 665 Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+E L + H YY LD+P +D +D + L AL+E PE FD + P VG Sbjct: 4 KQEIEQLRQELREHNYNYYVLDNPTISDYDFDIKLKELQALEEAHPEFFDANSPTLRVG 62 >gi|148243508|ref|YP_001228665.1| NAD-dependent DNA ligase LigA [Synechococcus sp. RCC307] gi|166216253|sp|A5GWQ3|DNLJ_SYNR3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|147851818|emb|CAK29312.1| NAD-dependent DNA ligase [Synechococcus sp. RCC307] Length = 675 Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 29/62 (46%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + L ++ YY LD P F D +YDR+ L L++Q P+L D P Sbjct: 5 AQQQLRAAELRQLLNRAAHAYYVLDAPEFEDAVYDRLYRELLDLEQQHPDLLSADSPTQR 64 Query: 117 VG 118 VG Sbjct: 65 VG 66 >gi|255264005|ref|ZP_05343347.1| DNA ligase, NAD-dependent [Thalassiobium sp. R2A62] gi|255106340|gb|EET49014.1| DNA ligase, NAD-dependent [Thalassiobium sp. R2A62] Length = 711 Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 33/72 (45%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 V L++ A E+ +L + Y+ D P +D YD + R A++ +FP+ Sbjct: 11 SQIDVDDLTRTAATDELTWLSYVLGQANDDYHGSDAPQMSDAEYDALKRRNMAIEARFPD 70 Query: 107 LFDEDHPWNTVG 118 L D P + VG Sbjct: 71 LKRGDSPSDQVG 82 >gi|327475237|gb|AEA77213.1| DNA ligase [Bacillus aquimaris] Length = 668 Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A V+ L + + Y+ LD P D YD++ L L++QFP+L D P Sbjct: 1 MDKQSAEKRVKELHDVLNQYNYEYHVLDKPSVPDSEYDQLLRELIELEDQFPDLKTSDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SERVG 65 >gi|254514186|ref|ZP_05126247.1| DNA ligase, NAD-dependent [gamma proteobacterium NOR5-3] gi|219676429|gb|EED32794.1| DNA ligase, NAD-dependent [gamma proteobacterium NOR5-3] Length = 675 Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 26/64 (40%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 +G+ V L + YY LD+P D YD L L+ + PEL D P Sbjct: 3 ERGDIKARVVALREQLERWNHQYYVLDEPTVPDQDYDAALRELQKLETEHPELQDPSSPT 62 Query: 115 NTVG 118 VG Sbjct: 63 QRVG 66 >gi|221639033|ref|YP_002525295.1| DNA ligase [Rhodobacter sphaeroides KD131] gi|254781405|sp|B9KRK2|DNLJ_RHOSK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|221159814|gb|ACM00794.1| DNA ligase [Rhodobacter sphaeroides KD131] Length = 704 Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 36/74 (48%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + + V L++ EA E+ L + Y+ D P +D YD + R A++EQF Sbjct: 1 MQDERPVDQLTEAEAAAELARLAEAIEAANTAYHTHDAPQISDADYDALRLRNRAIEEQF 60 Query: 105 PELFDEDHPWNTVG 118 PEL D P + VG Sbjct: 61 PELRRSDSPSDRVG 74 >gi|254460861|ref|ZP_05074277.1| DNA ligase, NAD-dependent [Rhodobacterales bacterium HTCC2083] gi|206677450|gb|EDZ41937.1| DNA ligase, NAD-dependent [Rhodobacteraceae bacterium HTCC2083] Length = 706 Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 34/71 (47%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 +T LS EA E+ L K Y+ D+P +D YD + +R A+++ FP L Sbjct: 3 KTDITELSVEEARAELAALSKALNTANVAYHGKDNPDLSDANYDALKQRNAAIEDHFPTL 62 Query: 108 FDEDHPWNTVG 118 ED P VG Sbjct: 63 VREDSPSKLVG 73 >gi|89097084|ref|ZP_01169975.1| DNA ligase [Bacillus sp. NRRL B-14911] gi|89088464|gb|EAR67574.1| DNA ligase [Bacillus sp. NRRL B-14911] Length = 668 Score = 91.1 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + A V+ L + + YY LD P D YDR+ + L L+ + P+L D P Sbjct: 1 MDLQNAEARVKELHNLLNQYGYEYYVLDKPSVPDSEYDRLLKELMELENEHPQLKTADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|119512036|ref|ZP_01631131.1| DNA ligase [Nodularia spumigena CCY9414] gi|119463326|gb|EAW44268.1| DNA ligase [Nodularia spumigena CCY9414] Length = 678 Score = 91.1 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E VE L ++ YY LD P+ D +YD++ L L+ ++PE D P Sbjct: 4 SQSEVK-RVEELRQLLQQASYAYYVLDAPMMEDAVYDQLYRELQELEIKYPEFITPDSPT 62 Query: 115 NTVG 118 VG Sbjct: 63 QRVG 66 >gi|75759916|ref|ZP_00739987.1| NAD-dependent DNA ligase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228899023|ref|ZP_04063296.1| DNA ligase [Bacillus thuringiensis IBL 4222] gi|74492583|gb|EAO55728.1| NAD-dependent DNA ligase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228860598|gb|EEN04985.1| DNA ligase [Bacillus thuringiensis IBL 4222] Length = 669 Score = 91.1 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIELEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|296171259|ref|ZP_06852663.1| DNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894227|gb|EFG73984.1| DNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 693 Score = 91.1 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + L HQ YY D P+ +D +D + L AL++++PEL D P V Sbjct: 12 EVRRRWQELADEVREHQFRYYIKDAPIVSDAEFDTMFNDLLALEDRYPELRVPDSPTQLV 71 Query: 118 G 118 G Sbjct: 72 G 72 >gi|227494609|ref|ZP_03924925.1| DNA ligase (NAD(+)) [Actinomyces coleocanis DSM 15436] gi|226832343|gb|EEH64726.1| DNA ligase (NAD(+)) [Actinomyces coleocanis DSM 15436] Length = 806 Score = 91.1 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 32/72 (44%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 + V + EA + LV + YY LD P +D YD + E L L+ ++P Sbjct: 21 EKTPVDTPVPAEATAKWRDLVTEINQMRFDYYNLDAPTASDAEYDVLFEELKDLEAKWPM 80 Query: 107 LFDEDHPWNTVG 118 L D P TVG Sbjct: 81 LVTPDSPTQTVG 92 >gi|119487266|ref|ZP_01621017.1| DNA ligase [Lyngbya sp. PCC 8106] gi|119455821|gb|EAW36956.1| DNA ligase [Lyngbya sp. PCC 8106] Length = 685 Score = 91.1 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 L+ E V+ L + YY LD P+ D +YD++ L L+ +P+L D Sbjct: 2 EQLT-SEIQQRVQKLSQQLHLASYAYYVLDAPIIEDAIYDQLYRELQQLETDYPQLITPD 60 Query: 112 HPWNTVG 118 P VG Sbjct: 61 SPTQRVG 67 >gi|331702040|ref|YP_004398999.1| DNA ligase [Lactobacillus buchneri NRRL B-30929] gi|329129383|gb|AEB73936.1| DNA ligase [Lactobacillus buchneri NRRL B-30929] Length = 675 Score = 91.1 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++S+ +A + L K YY D P D +YD+ ++L AL+ QFP++ D Sbjct: 4 ENMSEQQAAAKAGDLRKQLNQWADEYYTYDAPSVEDAVYDQTYQQLVALENQFPQIVTPD 63 Query: 112 HPWNTVG 118 P VG Sbjct: 64 SPTQKVG 70 >gi|152974127|ref|YP_001373644.1| NAD-dependent DNA ligase LigA [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|190359228|sp|A7GKJ1|DNLJ_BACCN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|152022879|gb|ABS20649.1| DNA ligase, NAD-dependent [Bacillus cytotoxicus NVH 391-98] Length = 669 Score = 91.1 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEAVQQRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLETENPEFITEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|296119554|ref|ZP_06838112.1| DNA ligase, NAD-dependent [Corynebacterium ammoniagenes DSM 20306] gi|295967437|gb|EFG80704.1| DNA ligase, NAD-dependent [Corynebacterium ammoniagenes DSM 20306] Length = 700 Score = 91.1 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 L+ EA L + H++ YY P D +D + + L AL+ P+L D Sbjct: 8 DQLNPEEAQKRWAELAQEVRRHRELYYNE-QPAIPDADFDALFQELVALESAHPQLVVPD 66 Query: 112 HPWNTVG 118 P VG Sbjct: 67 SPTQEVG 73 >gi|111023430|ref|YP_706402.1| NAD-dependent DNA ligase LigA [Rhodococcus jostii RHA1] gi|123045472|sp|Q0S2J2|DNLJ_RHOSR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|110822960|gb|ABG98244.1| DNA ligase (NAD+) [Rhodococcus jostii RHA1] Length = 696 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 35/74 (47%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + ++ + + + G L + HQ YY D P+ +DG +D + L+ L+ Q+ Sbjct: 1 MSESTEAPTPAPGHVREHWNELAEEVRQHQFRYYVRDAPIISDGEFDVLLGELNDLENQY 60 Query: 105 PELFDEDHPWNTVG 118 P+L D P VG Sbjct: 61 PDLRTPDSPTQLVG 74 >gi|149928191|ref|ZP_01916436.1| DNA ligase (NAD+) [Limnobacter sp. MED105] gi|149823082|gb|EDM82322.1| DNA ligase (NAD+) [Limnobacter sp. MED105] Length = 597 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 25/56 (44%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L+ + + YY LD P D YD+V L ++ PEL D P VG Sbjct: 27 MRRLIDLLNRWEYAYYVLDAPEVPDSEYDKVYRSLQQIENNHPELIQNDSPTQRVG 82 >gi|300743918|ref|ZP_07072938.1| DNA ligase, NAD-dependent [Rothia dentocariosa M567] gi|300380279|gb|EFJ76842.1| DNA ligase, NAD-dependent [Rothia dentocariosa M567] Length = 740 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 1/82 (1%) Query: 37 NKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSER 96 +L+ L L+ E L + YY+ D P +D YDR+ R Sbjct: 8 TPASLDRALKALDSSAELT-DTIRAEYAELTDTIRAARHDYYQADAPTLSDAEYDRLYRR 66 Query: 97 LDALQEQFPELFDEDHPWNTVG 118 L+ ++ Q+P L D P VG Sbjct: 67 LEQIEAQYPALIANDSPTQEVG 88 >gi|87301433|ref|ZP_01084273.1| DNA ligase [Synechococcus sp. WH 5701] gi|87283650|gb|EAQ75604.1| DNA ligase [Synechococcus sp. WH 5701] Length = 698 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 26/55 (47%) Query: 64 EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L ++ YY LD P D +YDR+ L+ L+ PEL D P VG Sbjct: 6 EELRRLLNRAAHAYYVLDSPEMEDAVYDRLYRELEQLERLHPELISPDSPTRRVG 60 >gi|34540958|ref|NP_905437.1| DNA ligase, NAD-dependent [Porphyromonas gingivalis W83] gi|81417286|sp|Q7MV47|DNLJ_PORGI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|34397273|gb|AAQ66336.1| DNA ligase, NAD-dependent [Porphyromonas gingivalis W83] Length = 669 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + +E L +I H+ YY L P D YD + ++L+ L+ ++PE D P + VG Sbjct: 8 AVRIEELRRILREHEYRYYVLSSPTIDDFEYDAMMKQLEELEREYPEWDSPDSPTHRVG 66 >gi|329770498|ref|ZP_08261876.1| DNA ligase [Gemella sanguinis M325] gi|328836247|gb|EGF85916.1| DNA ligase [Gemella sanguinis M325] Length = 666 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 35/62 (56%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E E+ LVK+ + YY D+P +D YD + ++L+ L++++PEL E+ P Sbjct: 2 KEIKEEIYKLVKLLNKYSYDYYVEDNPQISDTEYDTLYKQLEKLEKEYPELIQENSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|262203140|ref|YP_003274348.1| DNA ligase, NAD-dependent [Gordonia bronchialis DSM 43247] gi|262086487|gb|ACY22455.1| DNA ligase, NAD-dependent [Gordonia bronchialis DSM 43247] Length = 691 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + L HQ YY D P+ TDG +D + RL L++ PEL D P Sbjct: 12 ADLREQWSTLADEIREHQFRYYVKDSPVITDGEFDALLRRLQDLEDAHPELAAPDSPTKL 71 Query: 117 VG 118 VG Sbjct: 72 VG 73 >gi|228919228|ref|ZP_04082598.1| DNA ligase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840335|gb|EEM85606.1| DNA ligase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 669 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|229101110|ref|ZP_04231876.1| DNA ligase [Bacillus cereus Rock3-28] gi|228682238|gb|EEL36349.1| DNA ligase [Bacillus cereus Rock3-28] Length = 669 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|89075460|ref|ZP_01161871.1| DNA ligase [Photobacterium sp. SKA34] gi|89048732|gb|EAR54303.1| DNA ligase [Photobacterium sp. SKA34] Length = 670 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY D+P D YDR+ ++L ++ + PE D P VG Sbjct: 18 YHGHRYYVEDNPEIPDAEYDRMMQQLLKIEAEHPEWVTVDSPSQRVG 64 >gi|188995252|ref|YP_001929504.1| DNA ligase [Porphyromonas gingivalis ATCC 33277] gi|254781390|sp|B2RKL2|DNLJ_PORG3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|188594932|dbj|BAG33907.1| DNA ligase [Porphyromonas gingivalis ATCC 33277] Length = 669 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + +E L +I H+ YY L P D YD + ++L+ L+ ++PE D P + VG Sbjct: 8 AVRIEELRRILREHEYRYYVLSSPTIDDFEYDAMMKQLEELEREYPEWDSPDSPTHRVG 66 >gi|220906114|ref|YP_002481425.1| NAD-dependent DNA ligase LigA [Cyanothece sp. PCC 7425] gi|254781305|sp|B8HV17|DNLJ_CYAP4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219862725|gb|ACL43064.1| DNA ligase, NAD-dependent [Cyanothece sp. PCC 7425] Length = 738 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E V L ++ YY LD P+ D +YD++ L L+ Q+PEL D P V Sbjct: 19 EIRQRVLELRQLVQRASYAYYVLDAPILEDVVYDQLYRELQDLETQYPELLTPDSPTQRV 78 Query: 118 G 118 G Sbjct: 79 G 79 >gi|160872442|ref|ZP_02062574.1| DNA ligase, NAD-dependent [Rickettsiella grylli] gi|159121241|gb|EDP46579.1| DNA ligase, NAD-dependent [Rickettsiella grylli] Length = 674 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 26/46 (56%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY LD PL D YD + L+A+++++PEL D P VG Sbjct: 22 HNYHYYILDAPLINDATYDTLFRELEAIEKRYPELITPDSPTQRVG 67 >gi|56751245|ref|YP_171946.1| NAD-dependent DNA ligase LigA [Synechococcus elongatus PCC 6301] gi|81299088|ref|YP_399296.1| NAD-dependent DNA ligase LigA [Synechococcus elongatus PCC 7942] gi|81596046|sp|Q5N2P4|DNLJ_SYNP6 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|123728245|sp|Q31RL0|DNLJ_SYNE7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|56686204|dbj|BAD79426.1| DNA ligase [Synechococcus elongatus PCC 6301] gi|81167969|gb|ABB56309.1| DNA ligase, NAD-dependent [Synechococcus elongatus PCC 7942] Length = 679 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 27/64 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + L ++ YY LD P+ D +YDR+ L L++Q P L D P Sbjct: 9 TTTAIAQRASELRQLLQQASYAYYVLDQPVMEDAVYDRLYRELQDLEQQHPSLITPDSPT 68 Query: 115 NTVG 118 VG Sbjct: 69 QRVG 72 >gi|302522063|ref|ZP_07274405.1| DNA ligase, NAD-dependent [Streptomyces sp. SPB78] gi|302430958|gb|EFL02774.1| DNA ligase, NAD-dependent [Streptomyces sp. SPB78] Length = 783 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 30/62 (48%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + E + + + H+ YY D P+ +D +D + RL AL+E+ P+L D P Sbjct: 33 PADVREEHDGIAREVDEHRYRYYVNDQPVVSDAQFDELLRRLTALEEEHPQLRTPDSPTQ 92 Query: 116 TV 117 V Sbjct: 93 KV 94 >gi|229107967|ref|ZP_04237594.1| DNA ligase [Bacillus cereus Rock1-15] gi|228675470|gb|EEL30687.1| DNA ligase [Bacillus cereus Rock1-15] Length = 669 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|229095009|ref|ZP_04226005.1| DNA ligase [Bacillus cereus Rock3-29] gi|229113962|ref|ZP_04243388.1| DNA ligase [Bacillus cereus Rock1-3] gi|228669421|gb|EEL24837.1| DNA ligase [Bacillus cereus Rock1-3] gi|228688339|gb|EEL42221.1| DNA ligase [Bacillus cereus Rock3-29] Length = 669 Score = 91.1 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|331005395|ref|ZP_08328777.1| DNA ligase [gamma proteobacterium IMCC1989] gi|330420789|gb|EGG95073.1| DNA ligase [gamma proteobacterium IMCC1989] Length = 707 Score = 90.7 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 32/73 (43%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D A + S + ++ L + H+ YY LD+P D YDR+ L L+++ P Sbjct: 21 DAAHSLDFSSITQLDQQLNELREKIHHYSYQYYALDNPTIPDAEYDRLFLELQTLEKENP 80 Query: 106 ELFDEDHPWNTVG 118 D P VG Sbjct: 81 SYVTSDSPTQRVG 93 >gi|119961355|ref|YP_947208.1| DNA ligase, NAD-dependent [Arthrobacter aurescens TC1] gi|166215391|sp|A1R4P6|DNLJ_ARTAT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|119948214|gb|ABM07125.1| DNA ligase, NAD-dependent [Arthrobacter aurescens TC1] Length = 768 Score = 90.7 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E E L + ++ YY+ D P +D +D + RL+ L+ PEL D P VG Sbjct: 34 RDEYEQLADLVRKYRYAYYQEDSPTVSDAEFDELYRRLEELEALHPELVSNDSPTQEVG 92 >gi|119356312|ref|YP_910956.1| DNA ligase, NAD-dependent [Chlorobium phaeobacteroides DSM 266] gi|166215573|sp|A1BDQ5|DNLJ_CHLPD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|119353661|gb|ABL64532.1| DNA ligase, NAD-dependent [Chlorobium phaeobacteroides DSM 266] Length = 676 Score = 90.7 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L + H YY P +D +DR+ ERL L++ FP+ D P + VG Sbjct: 11 IEELRREINRHNTLYYVDARPEISDYEFDRLMERLIELEKAFPDFVTPDSPSHRVG 66 >gi|319943831|ref|ZP_08018112.1| DNA ligase [Lautropia mirabilis ATCC 51599] gi|319743064|gb|EFV95470.1| DNA ligase [Lautropia mirabilis ATCC 51599] Length = 779 Score = 90.7 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 27/63 (42%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + V+ L L H + YY D P D +YD + L L+ ++P L D P Sbjct: 20 PADIRARVQTLRAELLAHNRAYYEEDAPTVEDSVYDGLFLELQQLEARWPALLTPDSPTQ 79 Query: 116 TVG 118 VG Sbjct: 80 RVG 82 >gi|325110927|ref|YP_004271995.1| DNA ligase [Planctomyces brasiliensis DSM 5305] gi|324971195|gb|ADY61973.1| DNA ligase [Planctomyces brasiliensis DSM 5305] Length = 675 Score = 90.7 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L H + YY P TD +DR+ RL L++Q PE D P VG Sbjct: 5 VAQEIASLRDEIERHNRLYYVEAQPEITDREFDRLLNRLIDLEQQHPEFQSPDSPTQKVG 64 >gi|229194680|ref|ZP_04321473.1| DNA ligase [Bacillus cereus m1293] gi|228588783|gb|EEK46808.1| DNA ligase [Bacillus cereus m1293] Length = 669 Score = 90.7 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|42779416|ref|NP_976663.1| NAD-dependent DNA ligase LigA [Bacillus cereus ATCC 10987] gi|81411242|sp|Q73EM3|DNLJ_BACC1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|42735332|gb|AAS39271.1| DNA ligase, NAD-dependent [Bacillus cereus ATCC 10987] Length = 669 Score = 90.7 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|30018549|ref|NP_830180.1| NAD-dependent DNA ligase LigA [Bacillus cereus ATCC 14579] gi|229125792|ref|ZP_04254818.1| DNA ligase [Bacillus cereus BDRD-Cer4] gi|81436035|sp|Q81IP2|DNLJ_BACCR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|29894090|gb|AAP07381.1| NAD-dependent DNA ligase [Bacillus cereus ATCC 14579] gi|228657649|gb|EEL13461.1| DNA ligase [Bacillus cereus BDRD-Cer4] Length = 669 Score = 90.7 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|229148695|ref|ZP_04276945.1| DNA ligase [Bacillus cereus m1550] gi|228634703|gb|EEK91282.1| DNA ligase [Bacillus cereus m1550] Length = 669 Score = 90.7 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|218230787|ref|YP_002365135.1| NAD-dependent DNA ligase LigA [Bacillus cereus B4264] gi|254781552|sp|B7H4U8|DNLJ_BACC4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218158744|gb|ACK58736.1| DNA ligase (NAD(+)) [Bacillus cereus B4264] Length = 669 Score = 90.7 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|301052018|ref|YP_003790229.1| DNA ligase [Bacillus anthracis CI] gi|300374187|gb|ADK03091.1| DNA ligase [Bacillus cereus biovar anthracis str. CI] Length = 669 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|229042193|ref|ZP_04189947.1| DNA ligase [Bacillus cereus AH676] gi|228727128|gb|EEL78331.1| DNA ligase [Bacillus cereus AH676] Length = 669 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|259047691|ref|ZP_05738092.1| DNA ligase, NAD-dependent [Granulicatella adiacens ATCC 49175] gi|259035882|gb|EEW37137.1| DNA ligase, NAD-dependent [Granulicatella adiacens ATCC 49175] Length = 668 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L + YY D P TD YD+ L AL+++ PE D P VG Sbjct: 7 IQQRIEQLKEQLNRWSHEYYVEDKPTATDAEYDKAYHELLALEKEHPEFVTADSPTQRVG 66 >gi|52144941|ref|YP_081888.1| NAD-dependent DNA ligase LigA [Bacillus cereus E33L] gi|81689708|sp|Q63GS3|DNLJ_BACCZ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|51978410|gb|AAU19960.1| DNA ligase(NAD+) (NAD-dependent DNA ligase) [Bacillus cereus E33L] Length = 669 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|297538570|ref|YP_003674339.1| DNA ligase, NAD-dependent [Methylotenera sp. 301] gi|297257917|gb|ADI29762.1| DNA ligase, NAD-dependent [Methylotenera sp. 301] Length = 682 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 27/65 (41%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 SL + + + L ++ + YY LD P D YD V L ++ Q P L D Sbjct: 13 SLGQPNLALRCQQLRQLIAQYDHEYYVLDAPSVPDSEYDLVYRDLQDIERQHPNLITPDS 72 Query: 113 PWNTV 117 P V Sbjct: 73 PTQRV 77 >gi|264678823|ref|YP_003278730.1| DNA ligase, NAD-dependent [Comamonas testosteroni CNB-2] gi|262209336|gb|ACY33434.1| DNA ligase, NAD-dependent [Comamonas testosteroni CNB-2] Length = 708 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 27/62 (43%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 +V L YY LD P DG YDRV ++L+AL+ +P L D P Sbjct: 26 PESVTSKVAALRAQLHQWAHEYYVLDTPTVPDGEYDRVYQQLEALEGAYPALVTPDSPTQ 85 Query: 116 TV 117 V Sbjct: 86 RV 87 >gi|327402054|ref|YP_004342892.1| DNA ligase [Fluviicola taffensis DSM 16823] gi|327317562|gb|AEA42054.1| DNA ligase [Fluviicola taffensis DSM 16823] Length = 670 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ EA +++E L K H YY +P +D +D + + L L+ QFPEL + P Sbjct: 1 MNLSEAQLKIEQLTKELTLHNHNYYVESNPTISDYEFDVLLKELQDLETQFPELASDLSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TKRVG 65 >gi|226365931|ref|YP_002783714.1| NAD-dependent DNA ligase LigA [Rhodococcus opacus B4] gi|254781403|sp|C1B1S4|DNLJ_RHOOB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|226244421|dbj|BAH54769.1| NAD(+)-dependent DNA ligase [Rhodococcus opacus B4] Length = 697 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 35/74 (47%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + ++ + + + G L + HQ YY D P+ +DG +D + L+ L+ Q+ Sbjct: 2 VSESTEAPTPAPGSVREHWNELAEDVRQHQFRYYVRDAPIISDGEFDALLGELNDLENQY 61 Query: 105 PELFDEDHPWNTVG 118 P+L D P VG Sbjct: 62 PDLRTPDSPTQLVG 75 >gi|49479078|ref|YP_034626.1| NAD-dependent DNA ligase LigA [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118476055|ref|YP_893206.1| NAD-dependent DNA ligase LigA [Bacillus thuringiensis str. Al Hakam] gi|225862344|ref|YP_002747722.1| DNA ligase, NAD-dependent [Bacillus cereus 03BB102] gi|229182688|ref|ZP_04309929.1| DNA ligase [Bacillus cereus BGSC 6E1] gi|81397398|sp|Q6HP94|DNLJ_BACHK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166215395|sp|A0R906|DNLJ_BACAH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781551|sp|C1EV74|DNLJ_BACC3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|49330634|gb|AAT61280.1| DNA ligase(NAD+) (NAD-dependent DNA ligase) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118415280|gb|ABK83699.1| NAD-dependent DNA ligase [Bacillus thuringiensis str. Al Hakam] gi|225789655|gb|ACO29872.1| DNA ligase (NAD(+)) [Bacillus cereus 03BB102] gi|228600773|gb|EEK58352.1| DNA ligase [Bacillus cereus BGSC 6E1] Length = 669 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|318040766|ref|ZP_07972722.1| NAD-dependent DNA ligase LigA [Synechococcus sp. CB0101] Length = 690 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 26/71 (36%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + S L ++ YY LD P D +YDR+ L L+ PEL Sbjct: 2 SSPAPDESLAAPHARAAELRQLLNRAAHAYYVLDAPEMEDPVYDRLYRELLDLETAHPEL 61 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 62 IAPDSPTQRVG 72 >gi|317507336|ref|ZP_07965075.1| DNA ligase [Segniliparus rugosus ATCC BAA-974] gi|316254381|gb|EFV13712.1| DNA ligase [Segniliparus rugosus ATCC BAA-974] Length = 712 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 5/70 (7%) Query: 54 LSKGEAM-----IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 +S+G+A L HQ YY LD P TD +D + L AL+++ PEL Sbjct: 1 MSEGKAAGTTPQERWLRLADQVKEHQFRYYVLDSPTVTDAEFDALLRELQALEDEHPELA 60 Query: 109 DEDHPWNTVG 118 P VG Sbjct: 61 SASSPTKLVG 70 >gi|228956728|ref|ZP_04118514.1| DNA ligase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229143090|ref|ZP_04271523.1| DNA ligase [Bacillus cereus BDRD-ST24] gi|296501121|ref|YP_003662821.1| NAD-dependent DNA ligase LigA [Bacillus thuringiensis BMB171] gi|228640363|gb|EEK96760.1| DNA ligase [Bacillus cereus BDRD-ST24] gi|228802916|gb|EEM49748.1| DNA ligase [Bacillus thuringiensis serovar pakistani str. T13001] gi|296322173|gb|ADH05101.1| NAD-dependent DNA ligase LigA [Bacillus thuringiensis BMB171] Length = 669 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|299529801|ref|ZP_07043234.1| DNA ligase, NAD-dependent [Comamonas testosteroni S44] gi|298722215|gb|EFI63139.1| DNA ligase, NAD-dependent [Comamonas testosteroni S44] Length = 708 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 27/62 (43%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 +V L YY LD P DG YDRV ++L+AL+ +P L D P Sbjct: 26 PESVTSKVAALRAQLHQWAHEYYVLDTPTVPDGEYDRVYQQLEALEGAYPALVTPDSPTQ 85 Query: 116 TV 117 V Sbjct: 86 RV 87 >gi|228906068|ref|ZP_04069957.1| DNA ligase [Bacillus thuringiensis IBL 200] gi|228853477|gb|EEM98245.1| DNA ligase [Bacillus thuringiensis IBL 200] Length = 669 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRDMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|228937587|ref|ZP_04100225.1| DNA ligase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970474|ref|ZP_04131125.1| DNA ligase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977043|ref|ZP_04137446.1| DNA ligase [Bacillus thuringiensis Bt407] gi|228782660|gb|EEM30835.1| DNA ligase [Bacillus thuringiensis Bt407] gi|228789206|gb|EEM37134.1| DNA ligase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228822068|gb|EEM68058.1| DNA ligase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938080|gb|AEA13976.1| NAD-dependent DNA ligase LigA [Bacillus thuringiensis serovar chinensis CT-43] Length = 669 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRDMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|206974389|ref|ZP_03235306.1| DNA ligase, NAD-dependent [Bacillus cereus H3081.97] gi|217957864|ref|YP_002336408.1| NAD-dependent DNA ligase LigA [Bacillus cereus AH187] gi|254781553|sp|B7HSW5|DNLJ_BACC7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781554|sp|B9J1L6|DNLJ_BACCQ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|206747629|gb|EDZ59019.1| DNA ligase, NAD-dependent [Bacillus cereus H3081.97] gi|217064176|gb|ACJ78426.1| DNA ligase, NAD-dependent [Bacillus cereus AH187] Length = 669 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|218895413|ref|YP_002443824.1| DNA ligase, NAD-dependent [Bacillus cereus G9842] gi|228963387|ref|ZP_04124548.1| DNA ligase [Bacillus thuringiensis serovar sotto str. T04001] gi|254781550|sp|B7IUW5|DNLJ_BACC2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218545091|gb|ACK97485.1| DNA ligase, NAD-dependent [Bacillus cereus G9842] gi|228796281|gb|EEM43728.1| DNA ligase [Bacillus thuringiensis serovar sotto str. T04001] Length = 669 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|109898096|ref|YP_661351.1| DNA ligase, NAD-dependent [Pseudoalteromonas atlantica T6c] gi|122972028|sp|Q15UZ1|DNLJ_PSEA6 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|109700377|gb|ABG40297.1| DNA ligase, NAD-dependent [Pseudoalteromonas atlantica T6c] Length = 677 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 24/59 (40%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + ++ + YY D+P D YDR+ L ++ P+L D P VG Sbjct: 8 AQRLTQIINTINEYNYQYYVQDNPSVPDAEYDRLMRELLDIENNHPDLRSPDSPSQKVG 66 >gi|300118925|ref|ZP_07056636.1| NAD-dependent DNA ligase LigA [Bacillus cereus SJ1] gi|298723541|gb|EFI64272.1| NAD-dependent DNA ligase LigA [Bacillus cereus SJ1] Length = 669 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|15965917|ref|NP_386270.1| NAD-dependent DNA ligase LigA [Sinorhizobium meliloti 1021] gi|307308227|ref|ZP_07587936.1| DNA ligase, NAD-dependent [Sinorhizobium meliloti BL225C] gi|307319694|ref|ZP_07599119.1| DNA ligase, NAD-dependent [Sinorhizobium meliloti AK83] gi|81634276|sp|Q92NM8|DNLJ_RHIME RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|15075186|emb|CAC46743.1| Probable DNA ligase [Sinorhizobium meliloti 1021] gi|306894625|gb|EFN25386.1| DNA ligase, NAD-dependent [Sinorhizobium meliloti AK83] gi|306901225|gb|EFN31831.1| DNA ligase, NAD-dependent [Sinorhizobium meliloti BL225C] Length = 717 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 38/74 (51%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 L++ K V L++ EA E+ +L H Y+ D P +D YD + R D ++E+F Sbjct: 2 LNQRKSVEQLNEAEAAEELAFLAAELARHDMLYHGKDAPEISDADYDALKRRNDLIEERF 61 Query: 105 PELFDEDHPWNTVG 118 P L ED P VG Sbjct: 62 PVLVREDSPSRKVG 75 >gi|221066629|ref|ZP_03542734.1| DNA ligase, NAD-dependent [Comamonas testosteroni KF-1] gi|220711652|gb|EED67020.1| DNA ligase, NAD-dependent [Comamonas testosteroni KF-1] Length = 708 Score = 90.7 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 27/57 (47%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +V L YY LD P DG YDRV ++L+AL+ +P L D P V Sbjct: 31 SKVAALRAQLWQWAHEYYVLDAPTVPDGEYDRVYQQLEALEGAYPALVTPDSPTQRV 87 >gi|158334366|ref|YP_001515538.1| NAD-dependent DNA ligase LigA [Acaryochloris marina MBIC11017] gi|190359221|sp|B0C308|DNLJ_ACAM1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|158304607|gb|ABW26224.1| DNA ligase, NAD-dependent [Acaryochloris marina MBIC11017] Length = 675 Score = 90.7 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V+ L ++ YY LD PL D +YD++ L L+ Q+P+L D P VG Sbjct: 9 QARVQELRQLLQKASYAYYGLDAPLMEDAVYDQLYHELVDLEAQYPQLITPDSPTQRVG 67 >gi|317056400|ref|YP_004104867.1| DNA ligase, NAD-dependent [Ruminococcus albus 7] gi|315448669|gb|ADU22233.1| DNA ligase, NAD-dependent [Ruminococcus albus 7] Length = 659 Score = 90.7 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 30/64 (46%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 K A ++ LV+I +H + YY D +D YD + L L+ P+L +D P Sbjct: 3 EKESAKKRIDELVEILNYHSRLYYVEDRNEISDYEYDMLQNELKKLEAANPDLIRKDSPT 62 Query: 115 NTVG 118 VG Sbjct: 63 QRVG 66 >gi|94984803|ref|YP_604167.1| DNA ligase, NAD-dependent [Deinococcus geothermalis DSM 11300] gi|122986680|sp|Q1J0I6|DNLJ_DEIGD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|94555084|gb|ABF44998.1| DNA ligase, NAD-dependent [Deinococcus geothermalis DSM 11300] Length = 684 Score = 90.7 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 25/53 (47%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L H + YY LD P D YDR+ L AL+ PE E+ P TVG Sbjct: 27 LRAEIERHNRAYYELDAPEIPDDEYDRLVRELRALEAAHPEWVAENSPAQTVG 79 >gi|205372454|ref|ZP_03225267.1| NAD-dependent DNA ligase LigA [Bacillus coahuilensis m4-4] Length = 635 Score = 90.7 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + A V+ L + YY LD P +D YD + L A++++FPEL D P Sbjct: 1 MERQFAEERVKELHQTLNEWNYAYYVLDKPQVSDQEYDSKLQELIAIEQEFPELKTPDSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 SERIG 65 >gi|298369197|ref|ZP_06980515.1| DNA ligase, NAD-dependent [Neisseria sp. oral taxon 014 str. F0314] gi|298283200|gb|EFI24687.1| DNA ligase, NAD-dependent [Neisseria sp. oral taxon 014 str. F0314] Length = 830 Score = 90.3 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++L + + YY LD P D YD++ L+AL+ PEL D P VG Sbjct: 5 AQRIKHLTALLNRYAYEYYTLDAPSVPDAEYDKLFRELEALERNHPELKLPDSPTQRVG 63 >gi|84623945|ref|YP_451317.1| NAD-dependent DNA ligase LigA [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|123752764|sp|Q2P334|DNLJ_XANOM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|84367885|dbj|BAE69043.1| DNA ligase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 841 Score = 90.3 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + YY L DP TD YD++ L L++++PEL D P VG Sbjct: 5 VIERARELRRRIENADHRYYDLADPEITDAQYDQLFRELQELEQKYPELVTADSPSMRVG 64 >gi|261401085|ref|ZP_05987210.1| DNA ligase, NAD-dependent [Neisseria lactamica ATCC 23970] gi|269208977|gb|EEZ75432.1| DNA ligase, NAD-dependent [Neisseria lactamica ATCC 23970] Length = 827 Score = 90.3 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 13 AQRIHELTDLLNRYAYEYYTLDAPSVPDAEYDRLFRELEALELNHPELKLPDSPTQRVG 71 >gi|241764431|ref|ZP_04762455.1| DNA ligase, NAD-dependent [Acidovorax delafieldii 2AN] gi|241366173|gb|EER60750.1| DNA ligase, NAD-dependent [Acidovorax delafieldii 2AN] Length = 697 Score = 90.3 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 3/63 (4%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S +A + L YY +D+P D YD V L AL+ P+L D P Sbjct: 11 SLAQAA---DALRARLNLWAHQYYVMDEPTVPDAEYDSVFRELQALETAHPDLITPDSPT 67 Query: 115 NTV 117 V Sbjct: 68 QRV 70 >gi|122879187|ref|YP_201049.6| NAD-dependent DNA ligase LigA [Xanthomonas oryzae pv. oryzae KACC10331] gi|166216280|sp|Q5H057|DNLJ_XANOR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 841 Score = 90.3 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + YY L DP TD YD++ L L++++PEL D P VG Sbjct: 5 VIERARELRRRIENADHRYYDLADPEITDAQYDQLFRELQELEQKYPELVTADSPSMRVG 64 >gi|206890248|ref|YP_002249789.1| DNA ligase, NAD-dependent [Thermodesulfovibrio yellowstonii DSM 11347] gi|254781443|sp|B5YIF8|DNLJ_THEYD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|206742186|gb|ACI21243.1| DNA ligase, NAD-dependent [Thermodesulfovibrio yellowstonii DSM 11347] Length = 670 Score = 90.3 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + E+E LVK +H YY LD P+ +D YD + RL L+E++ D P Sbjct: 5 PEDIKKEIEKLVKELNYHNYRYYVLDSPVISDEEYDMMLRRLKELEEKW-GYILPDSPTQ 63 Query: 116 TVG 118 VG Sbjct: 64 RVG 66 >gi|241759788|ref|ZP_04757888.1| DNA ligase, NAD-dependent [Neisseria flavescens SK114] gi|241319796|gb|EER56192.1| DNA ligase, NAD-dependent [Neisseria flavescens SK114] Length = 859 Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++YL + + YY LD P D YD++ L+AL+ PEL D P VG Sbjct: 42 AQRIKYLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVG 100 >gi|261380488|ref|ZP_05985061.1| DNA ligase, NAD-dependent [Neisseria subflava NJ9703] gi|284796739|gb|EFC52086.1| DNA ligase, NAD-dependent [Neisseria subflava NJ9703] Length = 822 Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++YL + + YY LD P D YD++ L+AL+ PEL D P VG Sbjct: 5 AQRIKYLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVG 63 >gi|307244055|ref|ZP_07526174.1| DNA ligase (NAD+) [Peptostreptococcus stomatis DSM 17678] gi|306492579|gb|EFM64613.1| DNA ligase (NAD+) [Peptostreptococcus stomatis DSM 17678] Length = 702 Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 36/65 (55%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK EA + V L++I +H YY D P +D YDR+ + L L+E FPE +D P Sbjct: 22 ISKKEAGLMVGDLIEILNYHSDRYYNSDSPEISDMDYDRLMKSLILLEEAFPEYKKKDSP 81 Query: 114 WNTVG 118 VG Sbjct: 82 TVRVG 86 >gi|289450450|ref|YP_003474988.1| DNA ligase (NAD+) [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184997|gb|ADC91422.1| DNA ligase (NAD+) [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 758 Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 1/89 (1%) Query: 30 LEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGL 89 L A P K+ E+ K+ + E + E+ L H YY D P+ +D Sbjct: 64 LAATVEPEKKLKEAVAAALAKLDKTASPE-LREITELRAELNFHNNLYYVEDSPIISDYS 122 Query: 90 YDRVSERLDALQEQFPELFDEDHPWNTVG 118 YD + RL+ L+ PE D P VG Sbjct: 123 YDAMLRRLEELETAHPEYMTTDSPTVKVG 151 >gi|319787332|ref|YP_004146807.1| DNA ligase, NAD-dependent [Pseudoxanthomonas suwonensis 11-1] gi|317465844|gb|ADV27576.1| DNA ligase, NAD-dependent [Pseudoxanthomonas suwonensis 11-1] Length = 788 Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 54 LSKGEA-MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++ A L + + Y+ LD P TD YD + L+AL+ + PEL ED Sbjct: 1 MTSSPAPADRAAELRRRIEDANRRYHELDAPDITDAQYDALVRELEALEREHPELAAEDS 60 Query: 113 PWNTVG 118 P VG Sbjct: 61 PTRRVG 66 >gi|290967938|ref|ZP_06559488.1| DNA ligase (NAD(+)) [Megasphaera genomosp. type_1 str. 28L] gi|290782077|gb|EFD94655.1| DNA ligase (NAD(+)) [Megasphaera genomosp. type_1 str. 28L] Length = 668 Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 29/63 (46%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + + + + + K YY LD P +D YD + L+ L++++P+ D P Sbjct: 5 EEQEKVRLAEIKKQLAELSYQYYTLDAPTVSDYEYDMLYRELETLEKKYPQWVTPDSPTQ 64 Query: 116 TVG 118 +G Sbjct: 65 RIG 67 >gi|296140594|ref|YP_003647837.1| DNA ligase, NAD-dependent [Tsukamurella paurometabola DSM 20162] gi|296028728|gb|ADG79498.1| DNA ligase, NAD-dependent [Tsukamurella paurometabola DSM 20162] Length = 688 Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 L++ + + L + HQ YY D P+ +DG +D + +RL A+++ FPEL D Sbjct: 3 KELTEDDRRA-WQELAEEVRGHQFRYYVQDAPVLSDGEFDALLKRLQAMEDAFPELAVPD 61 Query: 112 HPWNTVG 118 P VG Sbjct: 62 SPTKLVG 68 >gi|196040110|ref|ZP_03107412.1| DNA ligase (NAD(+)) [Bacillus cereus NVH0597-99] gi|196028965|gb|EDX67570.1| DNA ligase (NAD(+)) [Bacillus cereus NVH0597-99] Length = 669 Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|325962711|ref|YP_004240617.1| DNA ligase, NAD-dependent [Arthrobacter phenanthrenivorans Sphe3] gi|323468798|gb|ADX72483.1| DNA ligase, NAD-dependent [Arthrobacter phenanthrenivorans Sphe3] Length = 767 Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 S+ E E LV + ++ YY+ D PL +D +D + RL+ ++ PEL D Sbjct: 22 ESVPSESVREEYENLVDLVRKYRFAYYQEDAPLVSDAEFDELFRRLEEIEALHPELVSND 81 Query: 112 HPWNTVG 118 P VG Sbjct: 82 SPTQEVG 88 >gi|313668860|ref|YP_004049144.1| DNA ligase [Neisseria lactamica ST-640] gi|313006322|emb|CBN87785.1| putative DNA ligase [Neisseria lactamica 020-06] Length = 827 Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + YY LD P D YD++ L+AL+ PEL D P VG Sbjct: 13 AQRIHELTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVG 71 >gi|90579891|ref|ZP_01235699.1| DNA ligase [Vibrio angustum S14] gi|90438776|gb|EAS63959.1| DNA ligase [Vibrio angustum S14] Length = 670 Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +H YY D+P D YDR+ ++L ++ PE D P VG Sbjct: 18 YHGHRYYVEDNPEIPDAEYDRMMQQLIKIEADHPEWITVDSPSQRVG 64 >gi|309378943|emb|CBX22396.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 827 Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + YY LD P D YD++ L+AL+ PEL D P VG Sbjct: 13 AQRIHELTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVG 71 >gi|291542878|emb|CBL15988.1| DNA ligase, NAD-dependent [Ruminococcus bromii L2-63] Length = 661 Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + A + L K +H YY D+P +D YD + L+ ++++FP L P Sbjct: 1 MDFITAQNRAQELTKQLEYHNNLYYNQDEPEISDYDYDMLMRELENIEKEFPSLKSPMSP 60 Query: 114 WNTVG 118 N VG Sbjct: 61 TNRVG 65 >gi|254283004|ref|ZP_04957972.1| DNA ligase, NAD-dependent [gamma proteobacterium NOR51-B] gi|219679207|gb|EED35556.1| DNA ligase, NAD-dependent [gamma proteobacterium NOR51-B] Length = 675 Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 23/58 (39%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 EV L + YY+ D P D YD RL L+ PEL D P VG Sbjct: 7 AEVAELRERIKRWALEYYQQDAPSVPDADYDAAFRRLHELESAHPELASPDSPTRRVG 64 >gi|229548668|ref|ZP_04437393.1| DNA ligase, NAD-dependent [Enterococcus faecalis ATCC 29200] gi|257420983|ref|ZP_05597973.1| DNA ligase [Enterococcus faecalis X98] gi|312953107|ref|ZP_07771956.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0102] gi|229306184|gb|EEN72180.1| DNA ligase, NAD-dependent [Enterococcus faecalis ATCC 29200] gi|257162807|gb|EEU92767.1| DNA ligase [Enterococcus faecalis X98] gi|310628941|gb|EFQ12224.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0102] gi|315153982|gb|EFT97998.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0031] gi|315156746|gb|EFU00763.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0043] Length = 676 Score = 90.3 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ A + L K + YY D P D +YDR+ + L ++ +FP+L D P Sbjct: 6 LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSP 65 Query: 114 WNTVG 118 VG Sbjct: 66 TQRVG 70 >gi|238855396|ref|ZP_04645707.1| DNA ligase, NAD-dependent [Lactobacillus jensenii 269-3] gi|260665363|ref|ZP_05866211.1| DNA ligase, NAD-dependent [Lactobacillus jensenii SJ-7A-US] gi|282932093|ref|ZP_06337550.1| DNA ligase (NAD(+)) [Lactobacillus jensenii 208-1] gi|238831994|gb|EEQ24320.1| DNA ligase, NAD-dependent [Lactobacillus jensenii 269-3] gi|260560867|gb|EEX26843.1| DNA ligase, NAD-dependent [Lactobacillus jensenii SJ-7A-US] gi|281303772|gb|EFA95917.1| DNA ligase (NAD(+)) [Lactobacillus jensenii 208-1] Length = 669 Score = 90.3 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 33/67 (49%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 L+K A E+E L K + YY D P D +YD+ +RL L++QFPEL D Sbjct: 2 AKLNKKAAQEEIENLRKKLNTWAEQYYAQDAPSVEDAVYDQNYQRLVELEKQFPELVTSD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|218901495|ref|YP_002449329.1| DNA ligase, NAD-dependent [Bacillus cereus AH820] gi|254781549|sp|B7JM96|DNLJ_BACC0 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218535434|gb|ACK87832.1| DNA ligase, NAD-dependent [Bacillus cereus AH820] Length = 669 Score = 90.3 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|30260478|ref|NP_842855.1| NAD-dependent DNA ligase LigA [Bacillus anthracis str. Ames] gi|49183320|ref|YP_026572.1| NAD-dependent DNA ligase LigA [Bacillus anthracis str. Sterne] gi|50196911|ref|YP_052606.1| NAD-dependent DNA ligase LigA [Bacillus anthracis str. 'Ames Ancestor'] gi|65317730|ref|ZP_00390689.1| COG0272: NAD-dependent DNA ligase (contains BRCT domain type II) [Bacillus anthracis str. A2012] gi|165871348|ref|ZP_02215996.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0488] gi|167634237|ref|ZP_02392559.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0442] gi|167640082|ref|ZP_02398349.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0193] gi|170688355|ref|ZP_02879564.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0465] gi|170708762|ref|ZP_02899199.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0389] gi|177653653|ref|ZP_02935792.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0174] gi|190567340|ref|ZP_03020254.1| DNA ligase, NAD-dependent [Bacillus anthracis Tsiankovskii-I] gi|190567489|ref|ZP_03020402.1| DNA ligase, NAD-dependent [Bacillus anthracis Tsiankovskii-I] gi|196034623|ref|ZP_03102031.1| DNA ligase, NAD-dependent [Bacillus cereus W] gi|227812970|ref|YP_002812979.1| DNA ligase, NAD-dependent [Bacillus anthracis str. CDC 684] gi|228913034|ref|ZP_04076673.1| DNA ligase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228925550|ref|ZP_04088639.1| DNA ligase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228944102|ref|ZP_04106481.1| DNA ligase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229119952|ref|ZP_04249207.1| DNA ligase [Bacillus cereus 95/8201] gi|229604913|ref|YP_002864923.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0248] gi|254686689|ref|ZP_05150547.1| NAD-dependent DNA ligase LigA [Bacillus anthracis str. CNEVA-9066] gi|254739086|ref|ZP_05196788.1| NAD-dependent DNA ligase LigA [Bacillus anthracis str. Western North America USA6153] gi|254742292|ref|ZP_05199978.1| NAD-dependent DNA ligase LigA [Bacillus anthracis str. Kruger B] gi|254756068|ref|ZP_05208097.1| NAD-dependent DNA ligase LigA [Bacillus anthracis str. Vollum] gi|254761885|ref|ZP_05213734.1| NAD-dependent DNA ligase LigA [Bacillus anthracis str. Australia 94] gi|81584374|sp|Q81ZG1|DNLJ_BACAN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781547|sp|C3PBP1|DNLJ_BACAA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781548|sp|C3L543|DNLJ_BACAC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|30253846|gb|AAP24341.1| DNA ligase (NAD(+)) [Bacillus anthracis str. Ames] gi|49177247|gb|AAT52623.1| DNA ligase, NAD-dependent [Bacillus anthracis str. Sterne] gi|50082973|gb|AAT70114.1| DNA ligase, NAD-dependent [Bacillus anthracis str. 'Ames Ancestor'] gi|164712832|gb|EDR18361.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0488] gi|167511893|gb|EDR87272.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0193] gi|167530551|gb|EDR93266.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0442] gi|170126341|gb|EDS95231.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0389] gi|170667687|gb|EDT18441.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0465] gi|172081233|gb|EDT66308.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0174] gi|190561276|gb|EDV15248.1| DNA ligase, NAD-dependent [Bacillus anthracis Tsiankovskii-I] gi|190561467|gb|EDV15438.1| DNA ligase, NAD-dependent [Bacillus anthracis Tsiankovskii-I] gi|195992666|gb|EDX56626.1| DNA ligase, NAD-dependent [Bacillus cereus W] gi|227002604|gb|ACP12347.1| DNA ligase (NAD(+)) [Bacillus anthracis str. CDC 684] gi|228663418|gb|EEL19003.1| DNA ligase [Bacillus cereus 95/8201] gi|228815491|gb|EEM61733.1| DNA ligase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228834028|gb|EEM79576.1| DNA ligase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228846439|gb|EEM91452.1| DNA ligase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229269321|gb|ACQ50958.1| DNA ligase, NAD-dependent [Bacillus anthracis str. A0248] Length = 669 Score = 90.3 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|317485271|ref|ZP_07944151.1| DNA ligase [Bilophila wadsworthia 3_1_6] gi|316923397|gb|EFV44603.1| DNA ligase [Bilophila wadsworthia 3_1_6] Length = 698 Score = 90.3 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L + +E L ++H Y+ LD P TD Y+ + L L+E+ PE D P Sbjct: 10 LVEDADKKRLEELRAFVIYHNHRYHTLDAPEITDDEYNAAFQELLRLEERHPEWRSPDSP 69 Query: 114 WNTVG 118 N +G Sbjct: 70 TNRIG 74 >gi|256826919|ref|YP_003150878.1| DNA ligase, NAD-dependent [Cryptobacterium curtum DSM 15641] gi|256583062|gb|ACU94196.1| DNA ligase, NAD-dependent [Cryptobacterium curtum DSM 15641] Length = 725 Score = 90.3 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 1/73 (1%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D A T + + +E L + H+ YY D P +D +D + L L+ + P Sbjct: 3 DDATP-TLFDQDDVGARIEALRREIEHNSWLYYAQDAPAISDAAFDSLMRELRQLEAEHP 61 Query: 106 ELFDEDHPWNTVG 118 E +D P VG Sbjct: 62 EFYDPTSPTQRVG 74 >gi|145220287|ref|YP_001130996.1| DNA ligase, NAD-dependent [Prosthecochloris vibrioformis DSM 265] gi|190359271|sp|A4SG85|DNLJ_PROVI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145206451|gb|ABP37494.1| DNA ligase, NAD-dependent [Chlorobium phaeovibrioides DSM 265] Length = 674 Score = 90.3 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 25/59 (42%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E E L H YY P +D +D + +RL L+ + PEL D P VG Sbjct: 8 RSEAERLRSDIERHNHLYYVEAKPELSDYDFDLLLDRLVQLEREHPELVTPDSPTQRVG 66 >gi|293376177|ref|ZP_06622422.1| DNA ligase (NAD(+)) [Turicibacter sanguinis PC909] gi|292645164|gb|EFF63229.1| DNA ligase (NAD(+)) [Turicibacter sanguinis PC909] Length = 669 Score = 90.3 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + +E L K+ + YY LD P +D YDR+ + L L+E+ PEL P VG Sbjct: 10 KLRIEELTKLLTQYNHEYYVLDKPSVSDREYDRLMQELMELEEKHPELKSNTSPTVRVG 68 >gi|229159446|ref|ZP_04287464.1| DNA ligase [Bacillus cereus R309803] gi|228624017|gb|EEK80825.1| DNA ligase [Bacillus cereus R309803] Length = 669 Score = 90.3 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|77463176|ref|YP_352680.1| DNA ligase [Rhodobacter sphaeroides 2.4.1] gi|123730578|sp|Q3J355|DNLJ_RHOS4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|77387594|gb|ABA78779.1| DNA ligase [Rhodobacter sphaeroides 2.4.1] Length = 704 Score = 90.3 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 36/74 (48%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + + V L++ EA E+ L + Y+ D P +D YD + R A++EQF Sbjct: 1 MQDERPVDQLTEAEAAAELARLAEAIEAANTAYHTHDAPQISDADYDALKVRNRAIEEQF 60 Query: 105 PELFDEDHPWNTVG 118 PEL D P + VG Sbjct: 61 PELRRSDSPSDRVG 74 >gi|229171138|ref|ZP_04298732.1| DNA ligase [Bacillus cereus MM3] gi|228612316|gb|EEK69544.1| DNA ligase [Bacillus cereus MM3] Length = 669 Score = 89.9 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKQRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|315145225|gb|EFT89241.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX2141] Length = 676 Score = 89.9 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ A + L K + YY D P D +YDR+ + L ++ +FP+L D P Sbjct: 6 LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSP 65 Query: 114 WNTVG 118 VG Sbjct: 66 TQRVG 70 >gi|256959858|ref|ZP_05564029.1| NAD-dependent DNA ligase [Enterococcus faecalis Merz96] gi|293385046|ref|ZP_06630880.1| DNA ligase, NAD-dependent [Enterococcus faecalis R712] gi|293389317|ref|ZP_06633778.1| DNA ligase, NAD-dependent [Enterococcus faecalis S613] gi|312906035|ref|ZP_07765048.1| DNA ligase, NAD-dependent [Enterococcus faecalis DAPTO 512] gi|312909381|ref|ZP_07768237.1| DNA ligase, NAD-dependent [Enterococcus faecalis DAPTO 516] gi|256950354|gb|EEU66986.1| NAD-dependent DNA ligase [Enterococcus faecalis Merz96] gi|291077724|gb|EFE15088.1| DNA ligase, NAD-dependent [Enterococcus faecalis R712] gi|291081339|gb|EFE18302.1| DNA ligase, NAD-dependent [Enterococcus faecalis S613] gi|310628030|gb|EFQ11313.1| DNA ligase, NAD-dependent [Enterococcus faecalis DAPTO 512] gi|311290405|gb|EFQ68961.1| DNA ligase, NAD-dependent [Enterococcus faecalis DAPTO 516] Length = 676 Score = 89.9 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ A + L K + YY D P D +YDR+ + L ++ +FP+L D P Sbjct: 6 LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSP 65 Query: 114 WNTVG 118 VG Sbjct: 66 TQRVG 70 >gi|255971181|ref|ZP_05421767.1| NAD-dependent DNA ligase [Enterococcus faecalis T1] gi|255962199|gb|EET94675.1| NAD-dependent DNA ligase [Enterococcus faecalis T1] Length = 676 Score = 89.9 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ A + L K + YY D P D +YDR+ + L ++ +FP+L D P Sbjct: 6 LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSP 65 Query: 114 WNTVG 118 VG Sbjct: 66 TQRVG 70 >gi|289679597|ref|ZP_06500487.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. syringae FF5] Length = 102 Score = 89.9 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L H Y+ LD+P D YDR+ L AL+ + P L D P VG Sbjct: 4 VETRILELRAELDQHNYRYHVLDEPSIPDVEYDRLFHELKALEAENPHLVTPDSPTQRVG 63 >gi|312900318|ref|ZP_07759629.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0470] gi|311292506|gb|EFQ71062.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0470] Length = 676 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ A + L K + YY D P D +YDR+ + L ++ +FP+L D P Sbjct: 6 LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSP 65 Query: 114 WNTVG 118 VG Sbjct: 66 TQRVG 70 >gi|329576880|gb|EGG58365.1| DNA ligase [Enterococcus faecalis TX1467] Length = 676 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ A + L K + YY D P D +YDR+ + L ++ +FP+L D P Sbjct: 6 LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSP 65 Query: 114 WNTVG 118 VG Sbjct: 66 TQRVG 70 >gi|307269776|ref|ZP_07551106.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX4248] gi|306513886|gb|EFM82488.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX4248] Length = 676 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ A + L K + YY D P D +YDR+ + L ++ +FP+L D P Sbjct: 6 LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSP 65 Query: 114 WNTVG 118 VG Sbjct: 66 TQRVG 70 >gi|307289585|ref|ZP_07569529.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0109] gi|306499399|gb|EFM68772.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0109] gi|315164584|gb|EFU08601.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX1302] Length = 676 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ A + L K + YY D P D +YDR+ + L ++ +FP+L D P Sbjct: 6 LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSP 65 Query: 114 WNTVG 118 VG Sbjct: 66 TQRVG 70 >gi|256617609|ref|ZP_05474455.1| NAD-dependent DNA ligase [Enterococcus faecalis ATCC 4200] gi|257089149|ref|ZP_05583510.1| NAD-dependent DNA ligase [Enterococcus faecalis CH188] gi|312904259|ref|ZP_07763421.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0635] gi|256597136|gb|EEU16312.1| NAD-dependent DNA ligase [Enterococcus faecalis ATCC 4200] gi|256997961|gb|EEU84481.1| NAD-dependent DNA ligase [Enterococcus faecalis CH188] gi|310632355|gb|EFQ15638.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0635] gi|315578805|gb|EFU90996.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0630] Length = 676 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ A + L K + YY D P D +YDR+ + L ++ +FP+L D P Sbjct: 6 LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSP 65 Query: 114 WNTVG 118 VG Sbjct: 66 TQRVG 70 >gi|229546559|ref|ZP_04435284.1| NAD-dependent DNA ligase [Enterococcus faecalis TX1322] gi|256854411|ref|ZP_05559775.1| DNA ligase [Enterococcus faecalis T8] gi|307274689|ref|ZP_07555861.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX2134] gi|307296388|ref|ZP_07576212.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0411] gi|229308304|gb|EEN74291.1| NAD-dependent DNA ligase [Enterococcus faecalis TX1322] gi|256709971|gb|EEU25015.1| DNA ligase [Enterococcus faecalis T8] gi|306496043|gb|EFM65628.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0411] gi|306508618|gb|EFM77716.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX2134] gi|315029103|gb|EFT41035.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX4000] gi|315157732|gb|EFU01749.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0312] gi|323479918|gb|ADX79357.1| DNA ligase, NAD-dependent [Enterococcus faecalis 62] Length = 676 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ A + L K + YY D P D +YDR+ + L ++ +FP+L D P Sbjct: 6 LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSP 65 Query: 114 WNTVG 118 VG Sbjct: 66 TQRVG 70 >gi|229028145|ref|ZP_04184287.1| DNA ligase [Bacillus cereus AH1271] gi|228733163|gb|EEL84003.1| DNA ligase [Bacillus cereus AH1271] Length = 669 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKQRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|229089420|ref|ZP_04220691.1| DNA ligase [Bacillus cereus Rock3-42] gi|228693897|gb|EEL47589.1| DNA ligase [Bacillus cereus Rock3-42] Length = 669 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|227517688|ref|ZP_03947737.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0104] gi|257083650|ref|ZP_05578011.1| NAD-dependent DNA ligase [Enterococcus faecalis Fly1] gi|227074843|gb|EEI12806.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0104] gi|256991680|gb|EEU78982.1| NAD-dependent DNA ligase [Enterococcus faecalis Fly1] gi|315146961|gb|EFT90977.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX4244] Length = 676 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ A + L K + YY D P D +YDR+ + L ++ +FP+L D P Sbjct: 6 LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSP 65 Query: 114 WNTVG 118 VG Sbjct: 66 TQRVG 70 >gi|257086082|ref|ZP_05580443.1| NAD-dependent DNA ligase [Enterococcus faecalis D6] gi|256994112|gb|EEU81414.1| NAD-dependent DNA ligase [Enterococcus faecalis D6] gi|315025779|gb|EFT37711.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX2137] Length = 676 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ A + L K + YY D P D +YDR+ + L ++ +FP+L D P Sbjct: 6 LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSP 65 Query: 114 WNTVG 118 VG Sbjct: 66 TQRVG 70 >gi|255973805|ref|ZP_05424391.1| NAD-dependent DNA ligase [Enterococcus faecalis T2] gi|256964440|ref|ZP_05568611.1| NAD-dependent DNA ligase [Enterococcus faecalis HIP11704] gi|257080988|ref|ZP_05575349.1| NAD-dependent DNA ligase [Enterococcus faecalis E1Sol] gi|307272536|ref|ZP_07553789.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0855] gi|307284516|ref|ZP_07564678.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0860] gi|255966677|gb|EET97299.1| NAD-dependent DNA ligase [Enterococcus faecalis T2] gi|256954936|gb|EEU71568.1| NAD-dependent DNA ligase [Enterococcus faecalis HIP11704] gi|256989018|gb|EEU76320.1| NAD-dependent DNA ligase [Enterococcus faecalis E1Sol] gi|306503193|gb|EFM72447.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0860] gi|306510821|gb|EFM79838.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0855] gi|315151576|gb|EFT95592.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0012] gi|315170712|gb|EFU14729.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX1342] gi|327534312|gb|AEA93146.1| NAD-dependent DNA ligase LigA [Enterococcus faecalis OG1RF] Length = 676 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ A + L K + YY D P D +YDR+ + L ++ +FP+L D P Sbjct: 6 LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSP 65 Query: 114 WNTVG 118 VG Sbjct: 66 TQRVG 70 >gi|300861866|ref|ZP_07107946.1| DNA ligase (NAD(+)) [Enterococcus faecalis TUSoD Ef11] gi|300848391|gb|EFK76148.1| DNA ligase (NAD(+)) [Enterococcus faecalis TUSoD Ef11] Length = 676 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ A + L K + YY D P D +YDR+ + L ++ +FP+L D P Sbjct: 6 LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSP 65 Query: 114 WNTVG 118 VG Sbjct: 66 TQRVG 70 >gi|229154059|ref|ZP_04282184.1| DNA ligase [Bacillus cereus ATCC 4342] gi|228629339|gb|EEK86041.1| DNA ligase [Bacillus cereus ATCC 4342] Length = 669 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|308271402|emb|CBX28010.1| DNA ligase [uncultured Desulfobacterium sp.] Length = 674 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 30/61 (49%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + +VE L H YY +DDP +D YD++ + L L+ ++P L D P V Sbjct: 8 DIAKKVENLKSELQKHNYHYYVMDDPQISDTQYDKMMQELIELEAKYPMLSTPDSPSMKV 67 Query: 118 G 118 G Sbjct: 68 G 68 >gi|256957407|ref|ZP_05561578.1| NAD-dependent DNA ligase [Enterococcus faecalis DS5] gi|257077597|ref|ZP_05571958.1| NAD-dependent DNA ligase [Enterococcus faecalis JH1] gi|294779927|ref|ZP_06745308.1| DNA ligase (NAD(+)) [Enterococcus faecalis PC1.1] gi|256947903|gb|EEU64535.1| NAD-dependent DNA ligase [Enterococcus faecalis DS5] gi|256985627|gb|EEU72929.1| NAD-dependent DNA ligase [Enterococcus faecalis JH1] gi|294452976|gb|EFG21397.1| DNA ligase (NAD(+)) [Enterococcus faecalis PC1.1] gi|295114065|emb|CBL32702.1| DNA ligase, NAD-dependent [Enterococcus sp. 7L76] gi|315036101|gb|EFT48033.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0027] gi|315172192|gb|EFU16209.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX1346] Length = 676 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ A + L K + YY D P D +YDR+ + L ++ +FP+L D P Sbjct: 6 LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSP 65 Query: 114 WNTVG 118 VG Sbjct: 66 TQRVG 70 >gi|29375318|ref|NP_814472.1| DNA ligase, NAD-dependent [Enterococcus faecalis V583] gi|227554838|ref|ZP_03984885.1| DNA ligase, NAD-dependent [Enterococcus faecalis HH22] gi|256761492|ref|ZP_05502072.1| NAD-dependent DNA ligase [Enterococcus faecalis T3] gi|257415292|ref|ZP_05592286.1| NAD-dependent DNA ligase [Enterococcus faecalis AR01/DG] gi|257418334|ref|ZP_05595328.1| NAD-dependent DNA ligase [Enterococcus faecalis T11] gi|81437298|sp|Q837V6|DNLJ_ENTFA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|29342778|gb|AAO80542.1| DNA ligase, NAD-dependent [Enterococcus faecalis V583] gi|227176007|gb|EEI56979.1| DNA ligase, NAD-dependent [Enterococcus faecalis HH22] gi|256682743|gb|EEU22438.1| NAD-dependent DNA ligase [Enterococcus faecalis T3] gi|257157120|gb|EEU87080.1| NAD-dependent DNA ligase [Enterococcus faecalis ARO1/DG] gi|257160162|gb|EEU90122.1| NAD-dependent DNA ligase [Enterococcus faecalis T11] gi|315031451|gb|EFT43383.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0017] gi|315166929|gb|EFU10946.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX1341] gi|315575350|gb|EFU87541.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0309B] gi|315581380|gb|EFU93571.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0309A] Length = 676 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ A + L K + YY D P D +YDR+ + L ++ +FP+L D P Sbjct: 6 LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSP 65 Query: 114 WNTVG 118 VG Sbjct: 66 TQRVG 70 >gi|315161924|gb|EFU05941.1| DNA ligase, NAD-dependent [Enterococcus faecalis TX0645] Length = 676 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ A + L K + YY D P D +YDR+ + L ++ +FP+L D P Sbjct: 6 LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSP 65 Query: 114 WNTVG 118 VG Sbjct: 66 TQRVG 70 >gi|315223456|ref|ZP_07865313.1| NAD-dependent DNA ligase LigA [Capnocytophaga ochracea F0287] gi|314946629|gb|EFS98620.1| NAD-dependent DNA ligase LigA [Capnocytophaga ochracea F0287] Length = 662 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 33/59 (55%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L + H YY LD+P +D +D+ + L AL++ +PE +DE+ P VG Sbjct: 2 KEKIQQLREELNEHNYNYYVLDNPTISDYEFDQKLKELQALEQAYPEFYDENSPTVRVG 60 >gi|224826983|ref|ZP_03700081.1| DNA ligase, NAD-dependent [Lutiella nitroferrum 2002] gi|224600816|gb|EEG07001.1| DNA ligase, NAD-dependent [Lutiella nitroferrum 2002] Length = 815 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 32/64 (50%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + +A+ + LV + + + YY D+P D YDR+ L+AL+ PEL D P Sbjct: 10 EREQAVQRIAELVPLLNRYSREYYERDEPTVPDVEYDRLYRELEALEAAHPELRRADSPT 69 Query: 115 NTVG 118 VG Sbjct: 70 LRVG 73 >gi|37520296|ref|NP_923673.1| NAD-dependent DNA ligase LigA [Gloeobacter violaceus PCC 7421] gi|81710991|sp|Q7NMN8|DNLJ_GLOVI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|35211289|dbj|BAC88668.1| DNA ligase [Gloeobacter violaceus PCC 7421] Length = 668 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 26/63 (41%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 E L + YY LD P +D +YD+ L L+ ++PEL D P Sbjct: 6 PPEIEEHTRTLRALLHRWGYAYYVLDAPEVSDAIYDQHYRELVDLESRYPELVSPDSPTR 65 Query: 116 TVG 118 VG Sbjct: 66 RVG 68 >gi|116329958|ref|YP_799676.1| DNA ligase (NAD+) [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122282269|sp|Q04W02|DNLJ_LEPBJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116123647|gb|ABJ74918.1| DNA ligase (NAD+) [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 681 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 2/76 (2%) Query: 45 LDKAKKV--TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQE 102 + K KK +LS+ EA + L HHQ YY + P +D +D++ +RL L+E Sbjct: 1 MSKKKKTYQNTLSEKEAKKVIAKLADEIRHHQYLYYVKNQPEISDFDFDQLFKRLRDLEE 60 Query: 103 QFPELFDEDHPWNTVG 118 +FP+ D + P VG Sbjct: 61 EFPQFKDLNSPTLVVG 76 >gi|254724765|ref|ZP_05186548.1| NAD-dependent DNA ligase LigA [Bacillus anthracis str. A1055] Length = 669 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|228931797|ref|ZP_04094693.1| DNA ligase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827777|gb|EEM73515.1| DNA ligase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 669 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|116329438|ref|YP_799158.1| DNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|122282782|sp|Q04XH0|DNLJ_LEPBL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116122182|gb|ABJ80225.1| DNA ligase (NAD+) (contains BRCT domain type II) [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 681 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 2/76 (2%) Query: 45 LDKAKKV--TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQE 102 + K KK +LS+ EA + L HHQ YY + P +D +D++ +RL L+E Sbjct: 1 MSKKKKTYQNTLSEKEAKKVIAKLADEIRHHQYLYYVKNQPEISDFDFDQLFKRLRDLEE 60 Query: 103 QFPELFDEDHPWNTVG 118 +FP+ D + P VG Sbjct: 61 EFPQFKDLNSPTLVVG 76 >gi|114776845|ref|ZP_01451888.1| DNA ligase, NAD-dependent [Mariprofundus ferrooxydans PV-1] gi|114552931|gb|EAU55362.1| DNA ligase, NAD-dependent [Mariprofundus ferrooxydans PV-1] Length = 670 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 30/64 (46%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 K +E+L H YY LD P+ +D YDR+ L++L+ + E D P Sbjct: 3 EKATLTARIEHLRSQLREHNYRYYILDAPVISDAEYDRLLRELESLEAELGEPVPADSPT 62 Query: 115 NTVG 118 TVG Sbjct: 63 RTVG 66 >gi|256820386|ref|YP_003141665.1| DNA ligase, NAD-dependent [Capnocytophaga ochracea DSM 7271] gi|256581969|gb|ACU93104.1| DNA ligase, NAD-dependent [Capnocytophaga ochracea DSM 7271] Length = 662 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 33/59 (55%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L + H YY LD+P +D +D+ + L AL++ +PE +DE+ P VG Sbjct: 2 KEKIQQLREELNEHNYNYYVLDNPTISDYEFDQKLKELQALEQAYPEFYDENSPTVRVG 60 >gi|228983547|ref|ZP_04143752.1| DNA ligase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228776143|gb|EEM24504.1| DNA ligase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 669 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|220912112|ref|YP_002487421.1| DNA ligase, NAD-dependent [Arthrobacter chlorophenolicus A6] gi|254778146|sp|B8HFJ3|DNLJ1_ARTCA RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 1 gi|219858990|gb|ACL39332.1| DNA ligase, NAD-dependent [Arthrobacter chlorophenolicus A6] Length = 770 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 31/67 (46%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 S+ E E L + ++ YY+ D PL +D +D + RL+ ++ PEL D Sbjct: 22 ESIPSDAIREEYENLSDLIRKYRFAYYQDDAPLVSDAEFDTLFRRLEEIEALHPELVAND 81 Query: 112 HPWNTVG 118 P VG Sbjct: 82 SPTQEVG 88 >gi|93005182|ref|YP_579619.1| DNA ligase, NAD-dependent [Psychrobacter cryohalolentis K5] gi|122989955|sp|Q1QDW8|DNLJ_PSYCK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|92392860|gb|ABE74135.1| DNA ligase, NAD-dependent [Psychrobacter cryohalolentis K5] Length = 691 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 ++ AK + + + ++ + H YY LD+P+ D YD++ L L+E++ Sbjct: 13 INTAKSAAN--EDAIVAQMRTFIDALKKHNYAYYVLDNPILEDSEYDQLRRSLLELEEEY 70 Query: 105 PELFDEDHPWNTVG 118 P+L D P N VG Sbjct: 71 PDLIQPDSPINQVG 84 >gi|325838923|ref|ZP_08166729.1| DNA ligase (NAD+) [Turicibacter sp. HGF1] gi|325490664|gb|EGC92975.1| DNA ligase (NAD+) [Turicibacter sp. HGF1] Length = 662 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + +E L K+ + YY LD P +D YDR+ + L L+E+ PEL P VG Sbjct: 3 KLRIEELTKLLTQYNHEYYVLDKPSVSDREYDRLMQELMELEEKHPELKSNTSPTVRVG 61 >gi|261207462|ref|ZP_05922148.1| NAD-dependent DNA ligase [Enterococcus faecium TC 6] gi|289565873|ref|ZP_06446314.1| DNA ligase, NAD-dependent [Enterococcus faecium D344SRF] gi|294618097|ref|ZP_06697694.1| DNA ligase, NAD-dependent [Enterococcus faecium E1679] gi|260078353|gb|EEW66058.1| NAD-dependent DNA ligase [Enterococcus faecium TC 6] gi|289162333|gb|EFD10192.1| DNA ligase, NAD-dependent [Enterococcus faecium D344SRF] gi|291595669|gb|EFF26965.1| DNA ligase, NAD-dependent [Enterococcus faecium E1679] Length = 679 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++ EA E L + YY D P D +YD+ L A++EQ+P+L D Sbjct: 5 EMTIDEAAKRAEELRTRLNQWSREYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDS 64 Query: 113 PWNTVG 118 P VG Sbjct: 65 PTQRVG 70 >gi|69246831|ref|ZP_00604140.1| NAD-dependent DNA ligase [Enterococcus faecium DO] gi|260560049|ref|ZP_05832227.1| NAD-dependent DNA ligase [Enterococcus faecium C68] gi|293559999|ref|ZP_06676507.1| DNA ligase, NAD-dependent [Enterococcus faecium E1162] gi|294621040|ref|ZP_06700232.1| DNA ligase, NAD-dependent [Enterococcus faecium U0317] gi|314937827|ref|ZP_07845144.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0133a04] gi|314941627|ref|ZP_07848507.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0133C] gi|314948874|ref|ZP_07852243.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0082] gi|314951008|ref|ZP_07854075.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0133A] gi|314993009|ref|ZP_07858405.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0133B] gi|314996456|ref|ZP_07861499.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0133a01] gi|68195064|gb|EAN09526.1| NAD-dependent DNA ligase [Enterococcus faecium DO] gi|260073884|gb|EEW62208.1| NAD-dependent DNA ligase [Enterococcus faecium C68] gi|291599354|gb|EFF30379.1| DNA ligase, NAD-dependent [Enterococcus faecium U0317] gi|291606087|gb|EFF35513.1| DNA ligase, NAD-dependent [Enterococcus faecium E1162] gi|313589438|gb|EFR68283.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0133a01] gi|313592532|gb|EFR71377.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0133B] gi|313596863|gb|EFR75708.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0133A] gi|313599518|gb|EFR78361.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0133C] gi|313642858|gb|EFS07438.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0133a04] gi|313644664|gb|EFS09244.1| DNA ligase, NAD-dependent [Enterococcus faecium TX0082] Length = 679 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++ EA E L + YY D P D +YD+ L A++EQ+P+L D Sbjct: 5 EMTIDEAAKRAEELRTRLNQWSREYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDS 64 Query: 113 PWNTVG 118 P VG Sbjct: 65 PTQRVG 70 >gi|326693831|ref|ZP_08230836.1| DNA ligase, NAD-dependent [Leuconostoc argentinum KCTC 3773] Length = 681 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 33/74 (44%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 L + + LS A EV L + YY D PL D +YD + RL AL+ F Sbjct: 2 LPEFTPIEQLSTSAAQQEVAQLQADLTEYGVAYYEQDAPLVEDHVYDALYARLVALESAF 61 Query: 105 PELFDEDHPWNTVG 118 P+ +D P VG Sbjct: 62 PQFVTQDSPTQNVG 75 >gi|293569137|ref|ZP_06680444.1| DNA ligase, NAD-dependent [Enterococcus faecium E1071] gi|291588184|gb|EFF20025.1| DNA ligase, NAD-dependent [Enterococcus faecium E1071] Length = 679 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++ EA E L + YY D P D +YD+ L A++EQ+P+L D Sbjct: 5 EMTIDEAAKRAEELRTRLNQWSREYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDS 64 Query: 113 PWNTVG 118 P VG Sbjct: 65 PTQRVG 70 >gi|257878462|ref|ZP_05658115.1| NAD-dependent DNA ligase [Enterococcus faecium 1,230,933] gi|257889341|ref|ZP_05668994.1| NAD-dependent DNA ligase [Enterococcus faecium 1,231,410] gi|257894353|ref|ZP_05674006.1| NAD-dependent DNA ligase [Enterococcus faecium 1,231,408] gi|258616016|ref|ZP_05713786.1| DNA ligase, NAD-dependent [Enterococcus faecium DO] gi|257812690|gb|EEV41448.1| NAD-dependent DNA ligase [Enterococcus faecium 1,230,933] gi|257825701|gb|EEV52327.1| NAD-dependent DNA ligase [Enterococcus faecium 1,231,410] gi|257830732|gb|EEV57339.1| NAD-dependent DNA ligase [Enterococcus faecium 1,231,408] Length = 678 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++ EA E L + YY D P D +YD+ L A++EQ+P+L D Sbjct: 4 EMTIDEAAKRAEELRTRLNQWSREYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDS 63 Query: 113 PWNTVG 118 P VG Sbjct: 64 PTQRVG 69 >gi|227551668|ref|ZP_03981717.1| DNA ligase (NAD(+)) [Enterococcus faecium TX1330] gi|293377659|ref|ZP_06623848.1| DNA ligase (NAD(+)) [Enterococcus faecium PC4.1] gi|227179231|gb|EEI60203.1| DNA ligase (NAD(+)) [Enterococcus faecium TX1330] gi|292643659|gb|EFF61780.1| DNA ligase (NAD(+)) [Enterococcus faecium PC4.1] Length = 679 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++ EA E L + YY D P D +YD+ L A++EQ+P+L D Sbjct: 5 EMTIDEAAKRAEELRTRLNQWSREYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDS 64 Query: 113 PWNTVG 118 P VG Sbjct: 65 PTQRVG 70 >gi|293571852|ref|ZP_06682868.1| DNA ligase, NAD-dependent [Enterococcus faecium E980] gi|291608106|gb|EFF37412.1| DNA ligase, NAD-dependent [Enterococcus faecium E980] Length = 679 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++ EA E L + YY D P D +YD+ L A++EQ+P+L D Sbjct: 5 EMTIDEAAKRAEELRTRLNQWSREYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDS 64 Query: 113 PWNTVG 118 P VG Sbjct: 65 PTQRVG 70 >gi|293557127|ref|ZP_06675681.1| DNA ligase, NAD-dependent [Enterococcus faecium E1039] gi|294614139|ref|ZP_06694060.1| DNA ligase, NAD-dependent [Enterococcus faecium E1636] gi|291592989|gb|EFF24577.1| DNA ligase, NAD-dependent [Enterococcus faecium E1636] gi|291600696|gb|EFF30994.1| DNA ligase, NAD-dependent [Enterococcus faecium E1039] Length = 679 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++ EA E L + YY D P D +YD+ L A++EQ+P+L D Sbjct: 5 EMTIDEAAKRAEELRTRLNQWSREYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDS 64 Query: 113 PWNTVG 118 P VG Sbjct: 65 PTQRVG 70 >gi|315083671|gb|EFT55647.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL027PA2] Length = 740 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 A L + L Q YY D P +D YDR+ L +++ PEL D P Sbjct: 18 AAARHHWTELAQRILDAQDAYYARDAPTISDAEYDRLMVELKKVEDDHPELRTPDSPTQR 77 Query: 117 VG 118 VG Sbjct: 78 VG 79 >gi|257895732|ref|ZP_05675385.1| NAD-dependent DNA ligase [Enterococcus faecium Com12] gi|257832297|gb|EEV58718.1| NAD-dependent DNA ligase [Enterococcus faecium Com12] Length = 678 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++ EA E L + YY D P D +YD+ L A++EQ+P+L D Sbjct: 4 EMTIDEAAKRAEELRTRLNQWSREYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDS 63 Query: 113 PWNTVG 118 P VG Sbjct: 64 PTQRVG 69 >gi|225022751|ref|ZP_03711943.1| hypothetical protein CORMATOL_02796 [Corynebacterium matruchotii ATCC 33806] gi|224944472|gb|EEG25681.1| hypothetical protein CORMATOL_02796 [Corynebacterium matruchotii ATCC 33806] Length = 699 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 + E E + L H++ YY P TD +D + ++L+AL+ PEL Sbjct: 4 TPAETTDTQEIHQEWQRLASEVTRHRELYYNQ-TPEITDAEFDALFKKLEALEADHPELA 62 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 63 TPDSPTQQVG 72 >gi|17229209|ref|NP_485757.1| NAD-dependent DNA ligase LigA [Nostoc sp. PCC 7120] gi|81772126|sp|Q8YW98|DNLJ_ANASP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|17135537|dbj|BAB78083.1| DNA ligase [Nostoc sp. PCC 7120] Length = 677 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 VE L ++ YY D P+ D +YD++ L L+ Q PEL D P +G Sbjct: 9 KRVEELRRLLQQASYAYYVSDAPIMEDAVYDQLYRELQQLEIQHPELVTPDSPTQRIG 66 >gi|229009789|ref|ZP_04167009.1| DNA ligase [Bacillus mycoides DSM 2048] gi|228751407|gb|EEM01213.1| DNA ligase [Bacillus mycoides DSM 2048] Length = 669 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRDMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|302524940|ref|ZP_07277282.1| DNA ligase, NAD-dependent [Streptomyces sp. AA4] gi|302433835|gb|EFL05651.1| DNA ligase, NAD-dependent [Streptomyces sp. AA4] Length = 707 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 ++ A+ VT + + L + HQ YY LD P+ +DG +D + L +++++ Sbjct: 1 MEAAQDVTDV-PADVRERHGALAEEIRGHQFRYYVLDSPIISDGQFDALLGDLQKIEDEY 59 Query: 105 PELFDEDHPWNTVG 118 P L D P VG Sbjct: 60 PALVTPDSPTQNVG 73 >gi|261377933|ref|ZP_05982506.1| DNA ligase, NAD-dependent [Neisseria cinerea ATCC 14685] gi|269145793|gb|EEZ72211.1| DNA ligase, NAD-dependent [Neisseria cinerea ATCC 14685] Length = 831 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + YY LD P D YD++ L+AL+ PEL D P VG Sbjct: 5 AQHIRRLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVG 63 >gi|257884412|ref|ZP_05664065.1| NAD-dependent DNA ligase [Enterococcus faecium 1,231,501] gi|257898303|ref|ZP_05677956.1| NAD-dependent DNA ligase [Enterococcus faecium Com15] gi|257820250|gb|EEV47398.1| NAD-dependent DNA ligase [Enterococcus faecium 1,231,501] gi|257836215|gb|EEV61289.1| NAD-dependent DNA ligase [Enterococcus faecium Com15] Length = 678 Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++ EA E L + YY D P D +YD+ L A++EQ+P+L D Sbjct: 4 EMTIDEAAKRAEELRTRLNQWSREYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDS 63 Query: 113 PWNTVG 118 P VG Sbjct: 64 PTQRVG 69 >gi|257887196|ref|ZP_05666849.1| NAD-dependent DNA ligase [Enterococcus faecium 1,141,733] gi|257823250|gb|EEV50182.1| NAD-dependent DNA ligase [Enterococcus faecium 1,141,733] Length = 678 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++ EA E L + YY D P D +YD+ L A++EQ+P+L D Sbjct: 4 EMTIDEAAKRAEELRTRLNQWSREYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDS 63 Query: 113 PWNTVG 118 P VG Sbjct: 64 PTQRVG 69 >gi|229131294|ref|ZP_04260196.1| DNA ligase [Bacillus cereus BDRD-ST196] gi|228652180|gb|EEL08115.1| DNA ligase [Bacillus cereus BDRD-ST196] Length = 669 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRDMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|163938297|ref|YP_001643181.1| NAD-dependent DNA ligase LigA [Bacillus weihenstephanensis KBAB4] gi|229165272|ref|ZP_04293059.1| DNA ligase [Bacillus cereus AH621] gi|254781256|sp|A9VRG3|DNLJ_BACWK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|163860494|gb|ABY41553.1| DNA ligase, NAD-dependent [Bacillus weihenstephanensis KBAB4] gi|228618097|gb|EEK75135.1| DNA ligase [Bacillus cereus AH621] Length = 669 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRDMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|305682056|ref|ZP_07404860.1| DNA ligase (NAD+) [Corynebacterium matruchotii ATCC 14266] gi|305658529|gb|EFM48032.1| DNA ligase (NAD+) [Corynebacterium matruchotii ATCC 14266] Length = 715 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 + E E + L H++ YY P TD +D + ++L+AL+ PEL Sbjct: 11 TPAETTDTQEIHQEWQRLASEVTRHRELYYNQ-TPEITDAEFDALFKKLEALEADHPELA 69 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 70 TPDSPTQQVG 79 >gi|78188256|ref|YP_378594.1| NAD-dependent DNA ligase [Chlorobium chlorochromatii CaD3] gi|123743484|sp|Q3ATX4|DNLJ_CHLCH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|78170455|gb|ABB27551.1| NAD-dependent DNA ligase [Chlorobium chlorochromatii CaD3] Length = 667 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ +A + L + H Y+ P +D +D++ E L AL+ +FP+L D P Sbjct: 1 MTIIDASERIAQLRQEIERHNYLYFNEAKPELSDYEFDKLLEELMALEREFPDLLTPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|225075650|ref|ZP_03718849.1| hypothetical protein NEIFLAOT_00666 [Neisseria flavescens NRL30031/H210] gi|224953072|gb|EEG34281.1| hypothetical protein NEIFLAOT_00666 [Neisseria flavescens NRL30031/H210] Length = 822 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++YL + + YY LD P D YD++ L+AL+ PEL D P VG Sbjct: 5 AQRIQYLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVG 63 >gi|294506892|ref|YP_003570950.1| NAD-dependent DNA ligase [Salinibacter ruber M8] gi|294343220|emb|CBH23998.1| NAD-dependent DNA ligase [Salinibacter ruber M8] Length = 691 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 28/49 (57%) Query: 70 ALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY LD P+ +D YDR+ ++L L+ ++P L D P + VG Sbjct: 32 LRHHNYRYYVLDAPVVSDAEYDRLFQQLQTLEAEYPGLQTPDSPTHQVG 80 >gi|110637718|ref|YP_677925.1| DNA ligase [Cytophaga hutchinsonii ATCC 33406] gi|123354667|sp|Q11VI1|DNLJ_CYTH3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|110280399|gb|ABG58585.1| DNA ligase [Cytophaga hutchinsonii ATCC 33406] Length = 670 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ +A+ +E L K+ +H YY+ D +D +D + + L L++QFP D P Sbjct: 1 MNDAQALARIEELNKVLHYHNNLYYQKDTTEISDFEFDTLLQELIELEKQFPLYLKADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|257882881|ref|ZP_05662534.1| NAD-dependent DNA ligase [Enterococcus faecium 1,231,502] gi|257818539|gb|EEV45867.1| NAD-dependent DNA ligase [Enterococcus faecium 1,231,502] Length = 674 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ EA E L + YY D P D +YD+ L A++EQ+P+L D P Sbjct: 1 MTIDEAAKRAEELRTRLNQWSREYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|217077826|ref|YP_002335544.1| DNA ligase, NAD-dependent [Thermosipho africanus TCF52B] gi|254781437|sp|B7IDX6|DNLJ_THEAB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|217037681|gb|ACJ76203.1| DNA ligase, NAD-dependent [Thermosipho africanus TCF52B] Length = 665 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 36/65 (55%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K + E+E L + +H YY L DP+ +D YD++ ++L L++++PE + P Sbjct: 1 MDKKKFKEEIEKLREEIEYHNYRYYVLADPVISDEEYDKLLKKLIELEKKYPEFYSPTSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQKVG 65 >gi|148272584|ref|YP_001222145.1| NAD-dependent DNA ligase LigA [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|166215575|sp|A5CQU5|DNLJ_CLAM3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|147830514|emb|CAN01449.1| NAD-dependant DNA ligase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 853 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Query: 44 WLDKAKKVTSLSKGEAM-IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQE 102 D A T+ + EA V+ L H+ YY D +D YD + L+AL+E Sbjct: 10 AADDAVPATTPADLEAASARVDALRTEIERHRDEYYGADASTLSDAEYDALVHELEALEE 69 Query: 103 QFPELFDEDHPWNTVG 118 P L +D P TVG Sbjct: 70 AHPTLRSQDSPTQTVG 85 >gi|254411541|ref|ZP_05025318.1| DNA ligase, NAD-dependent [Microcoleus chthonoplastes PCC 7420] gi|196182042|gb|EDX77029.1| DNA ligase, NAD-dependent [Microcoleus chthonoplastes PCC 7420] Length = 676 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V+ L + YY D+P+ D +YD++ L L+ Q+PEL D P VG Sbjct: 4 VKQRVQELRNLLQQASYAYYVRDNPMMEDAVYDQLYRELQDLESQYPELVTPDSPTQRVG 63 >gi|320450863|ref|YP_004202959.1| DNA ligase, NAD-dependent [Thermus scotoductus SA-01] gi|320151032|gb|ADW22410.1| DNA ligase, NAD-dependent [Thermus scotoductus SA-01] Length = 674 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ EA + L + +H YY LD P +D YDR+ L L+E+FPEL D P Sbjct: 1 MTLEEARKRINELRDLIRYHNYRYYVLDAPEISDAEYDRLLRELKELEERFPELKSPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TEQVG 65 >gi|149173204|ref|ZP_01851835.1| DNA ligase [Planctomyces maris DSM 8797] gi|148848010|gb|EDL62342.1| DNA ligase [Planctomyces maris DSM 8797] Length = 671 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 29/60 (48%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+E L K HH + YY P TD YDR+ +RL+ L+ PE + P VG Sbjct: 3 VRTEIEELRKQLEHHNRLYYLDAKPEITDREYDRLMKRLEQLETDHPEYDSPESPTKKVG 62 >gi|1770452|emb|CAA66920.1| ligase-like protein [Homo sapiens] Length = 454 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 33/74 (44%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 L + + LS A EV L + YY D PL D +YD + RL AL+ F Sbjct: 2 LPEFTPIEQLSTSAAQQEVAQLQADLTEYGVAYYEQDAPLVEDHVYDALYARLVALESAF 61 Query: 105 PELFDEDHPWNTVG 118 P+ +D P VG Sbjct: 62 PQFVTQDSPTQNVG 75 >gi|253565642|ref|ZP_04843097.1| DNA ligase [Bacteroides sp. 3_2_5] gi|251945921|gb|EES86328.1| DNA ligase [Bacteroides sp. 3_2_5] Length = 665 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L H YY L+ P +D +D + L L+++ PE DE+ P VG Sbjct: 3 VKEKIEQLRLQLHQHNYNYYVLNAPEISDKEFDDLMRELQDLEQEHPEYKDENSPTMRVG 62 >gi|226226196|ref|YP_002760302.1| NAD(+)-dependent DNA ligase [Gemmatimonas aurantiaca T-27] gi|254781336|sp|C1A6H2|DNLJ_GEMAT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|226089387|dbj|BAH37832.1| NAD(+)-dependent DNA ligase [Gemmatimonas aurantiaca T-27] Length = 689 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 28/61 (45%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + + L + Q YY LD P +D YDR+ L ++ ++P L ED P V Sbjct: 11 QTVERARELREQLGTAQHEYYVLDRPTLSDQEYDRLFRELQGIEAEYPTLCTEDSPTRRV 70 Query: 118 G 118 G Sbjct: 71 G 71 >gi|122971128|sp|Q14L37|DNLJ_SPICI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|110005471|emb|CAK99793.1| dna ligase protein [Spiroplasma citri] Length = 667 Score = 89.5 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ +A L + YY D+P +D YDR + L A+++Q+ EL D P Sbjct: 1 MTFEQAKKRSLVLKEQLEKWNYEYYVNDNPSVSDQEYDRALQELIAIEQQYSELITIDSP 60 Query: 114 WNTV 117 V Sbjct: 61 TQRV 64 >gi|265764018|ref|ZP_06092586.1| DNA ligase, NAD-dependent [Bacteroides sp. 2_1_16] gi|263256626|gb|EEZ27972.1| DNA ligase, NAD-dependent [Bacteroides sp. 2_1_16] Length = 665 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L H YY L+ P +D +D + L L+++ PE DE+ P VG Sbjct: 3 VKEKIEQLRLQLHQHNYNYYVLNAPEISDKEFDDLMRELQDLEQEHPEYKDENSPTMRVG 62 >gi|170746461|ref|YP_001752721.1| DNA ligase, NAD-dependent [Methylobacterium radiotolerans JCM 2831] gi|254781368|sp|B1M575|DNLJ_METRJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|170652983|gb|ACB22038.1| DNA ligase, NAD-dependent [Methylobacterium radiotolerans JCM 2831] Length = 810 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Query: 47 KAKKVT-SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 K++ + L+ EA E L L + YY+ D P +D YDR+ RL+ ++ +FP Sbjct: 5 KSEPLDLDLTAEEARAEYARLSDAILEADRLYYQEDAPEISDAEYDRLRRRLEDIEARFP 64 Query: 106 ELFDEDHPWNTVG 118 +L +VG Sbjct: 65 DLAGTGAASTSVG 77 >gi|60681965|ref|YP_212109.1| putative DNA ligase [Bacteroides fragilis NCTC 9343] gi|81314971|sp|Q5LCI0|DNLJ_BACFN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|60493399|emb|CAH08185.1| putative DNA ligase [Bacteroides fragilis NCTC 9343] Length = 665 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L H YY L+ P +D +D + L L+++ PE DE+ P VG Sbjct: 3 VKEKIEQLRLQLHQHNYNYYVLNAPEISDKEFDDLMRELQDLEQEHPEYKDENSPTMRVG 62 >gi|53713694|ref|YP_099686.1| DNA ligase [Bacteroides fragilis YCH46] gi|81382396|sp|Q64TM7|DNLJ_BACFR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|52216559|dbj|BAD49152.1| DNA ligase [Bacteroides fragilis YCH46] Length = 665 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L H YY L+ P +D +D + L L+++ PE DE+ P VG Sbjct: 3 VKEKIEQLRLQLHQHNYNYYVLNAPEISDKEFDDLMRELQDLEQEHPEYKDENSPTMRVG 62 >gi|301163404|emb|CBW22954.1| putative DNA ligase [Bacteroides fragilis 638R] Length = 665 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L H YY L+ P +D +D + L L+++ PE DE+ P VG Sbjct: 3 VKEKIEQLRLQLHQHNYNYYVLNAPEISDKEFDDLMRELQDLEQEHPEYKDENSPTMRVG 62 >gi|256390514|ref|YP_003112078.1| DNA ligase, NAD-dependent [Catenulispora acidiphila DSM 44928] gi|256356740|gb|ACU70237.1| DNA ligase, NAD-dependent [Catenulispora acidiphila DSM 44928] Length = 723 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 28/66 (42%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + + L + + + YY LD P +D +D +L+A+++ PEL D Sbjct: 2 DETTAATPAQQHAALAEEIENARYRYYVLDAPTISDADFDVKLRQLEAIEDANPELRTPD 61 Query: 112 HPWNTV 117 P V Sbjct: 62 SPTQKV 67 >gi|322373465|ref|ZP_08048001.1| DNA ligase, NAD-dependent [Streptococcus sp. C150] gi|321278507|gb|EFX55576.1| DNA ligase, NAD-dependent [Streptococcus sp. C150] Length = 652 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV + K YY D+P +D YD++ L AL+ + PEL D P + VG Sbjct: 2 EKRMKELVAKLNQYAKEYYTEDNPSVSDAEYDKLYRELVALEAEHPELVQADSPTHRVG 60 >gi|153003607|ref|YP_001377932.1| DNA ligase, NAD-dependent [Anaeromyxobacter sp. Fw109-5] gi|166215389|sp|A7H8A2|DNLJ_ANADF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|152027180|gb|ABS24948.1| DNA ligase, NAD-dependent [Anaeromyxobacter sp. Fw109-5] Length = 699 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 24/66 (36%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + A L L YY LD P+ D YDR+ L ++ PEL D Sbjct: 3 ADADRDSAETRAAELRARILDADHAYYVLDRPVLADAEYDRLVRELAEIEAAHPELATSD 62 Query: 112 HPWNTV 117 P V Sbjct: 63 SPTQRV 68 >gi|88703478|ref|ZP_01101194.1| DNA ligase [Congregibacter litoralis KT71] gi|88702192|gb|EAQ99295.1| DNA ligase [Congregibacter litoralis KT71] Length = 674 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 24/65 (36%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + V L + YY LD P D YD L L+E PEL D P Sbjct: 1 MPGDDIRNRVHSLREQLERWNHEYYILDSPTVPDQEYDGALRELQTLEEAHPELRDASSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|229188563|ref|ZP_04315602.1| DNA ligase [Bacillus cereus ATCC 10876] gi|228594752|gb|EEK52532.1| DNA ligase [Bacillus cereus ATCC 10876] Length = 669 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIVKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|256839697|ref|ZP_05545206.1| DNA ligase, NAD-dependent [Parabacteroides sp. D13] gi|256738627|gb|EEU51952.1| DNA ligase, NAD-dependent [Parabacteroides sp. D13] Length = 664 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L H YY L P +D +D++ + L L+ PE D D P VG Sbjct: 2 VEAKIKALRDELERHNYNYYVLSAPTISDFEFDKMMKELQELEAAHPEFADPDSPTRRVG 61 >gi|150007448|ref|YP_001302191.1| DNA ligase [Parabacteroides distasonis ATCC 8503] gi|298375424|ref|ZP_06985381.1| DNA ligase, NAD-dependent [Bacteroides sp. 3_1_19] gi|166216223|sp|A6LA55|DNLJ_PARD8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|149935872|gb|ABR42569.1| DNA ligase [Parabacteroides distasonis ATCC 8503] gi|298267924|gb|EFI09580.1| DNA ligase, NAD-dependent [Bacteroides sp. 3_1_19] Length = 664 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L H YY L P +D +D++ + L L+ PE D D P VG Sbjct: 2 VEAKIKALRDELERHNYNYYVLSAPTISDFEFDKMMKELQELEAAHPEFADPDSPTRRVG 61 >gi|255013963|ref|ZP_05286089.1| DNA ligase [Bacteroides sp. 2_1_7] gi|301310547|ref|ZP_07216486.1| DNA ligase, NAD-dependent [Bacteroides sp. 20_3] gi|300832121|gb|EFK62752.1| DNA ligase, NAD-dependent [Bacteroides sp. 20_3] Length = 664 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L H YY L P +D +D++ + L L+ PE D D P VG Sbjct: 2 VEAKIKALRDELERHNYNYYVLSAPTISDFEFDKMMKELQELEAAHPEFADPDSPTRRVG 61 >gi|196234149|ref|ZP_03132982.1| DNA ligase (NAD(+)) [Chthoniobacter flavus Ellin428] gi|196221800|gb|EDY16337.1| DNA ligase (NAD(+)) [Chthoniobacter flavus Ellin428] Length = 122 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 24/60 (40%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L + H + YY P +D YD + L L++ PE D P VG Sbjct: 4 VQTRIEELRQQLEEHNRRYYDEATPTISDADYDALFRELRDLEDAHPEFITPDSPTRRVG 63 >gi|238917130|ref|YP_002930647.1| DNA ligase (NAD+) [Eubacterium eligens ATCC 27750] gi|238872490|gb|ACR72200.1| DNA ligase (NAD+) [Eubacterium eligens ATCC 27750] Length = 669 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 28/58 (48%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L K +H YY D+P +D YD++ RL ++++ PE D P +G Sbjct: 5 QEYSELKKTIDYHMDRYYNQDEPEISDYEYDKLMIRLKEIEKEHPEWVTSDSPSQKIG 62 >gi|262382012|ref|ZP_06075150.1| DNA ligase, NAD-dependent [Bacteroides sp. 2_1_33B] gi|262297189|gb|EEY85119.1| DNA ligase, NAD-dependent [Bacteroides sp. 2_1_33B] Length = 664 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L H YY L P +D +D++ + L L+ PE D D P VG Sbjct: 2 VEAKIKALRDELERHNYNYYVLSAPTISDFEFDKMMKELQELEAAHPEFADPDSPTRRVG 61 >gi|213027451|ref|ZP_03341898.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 79 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L HH+ Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEILDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 63 >gi|15613212|ref|NP_241515.1| NAD-dependent DNA ligase LigA [Bacillus halodurans C-125] gi|15213980|sp|Q9KF37|DNLJ_BACHD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|10173263|dbj|BAB04368.1| DNA ligase (polydeoxyribonucleotide synthase (NAD+)) [Bacillus halodurans C-125] Length = 669 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A ++E L + YY LD PL +D YD + L L+E FPEL + P Sbjct: 1 MERNDAERKIEKLRNQLEEYGYHYYVLDKPLVSDAEYDGLMNELIELEEAFPELKSDTSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|119503165|ref|ZP_01625249.1| DNA ligase (NAD+) [marine gamma proteobacterium HTCC2080] gi|119460811|gb|EAW41902.1| DNA ligase (NAD+) [marine gamma proteobacterium HTCC2080] Length = 673 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S+ + EV L + YYR D P +D YDR L L+++FP L D P Sbjct: 1 MSEVDPYDEVMRLRDLLRSWGVEYYRNDAPTVSDSEYDRTLLALRELEQKFPHLVSADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|85059656|ref|YP_455358.1| NAD-dependent DNA ligase LigA [Sodalis glossinidius str. 'morsitans'] gi|123766419|sp|Q2NSC2|DNLJ_SODGM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|84780176|dbj|BAE74953.1| DNA ligase [Sodalis glossinidius str. 'morsitans'] Length = 678 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + L K H + YY P D YDR L L+ + P+L D P Sbjct: 2 EQIEQHILRLRKQLRHWEYLYYVEAAPEVPDSEYDRFMAELRTLEAERPDLLTADSPSQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|298492390|ref|YP_003722567.1| DNA ligase, NAD-dependent ['Nostoc azollae' 0708] gi|298234308|gb|ADI65444.1| DNA ligase, NAD-dependent ['Nostoc azollae' 0708] Length = 684 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++ EA + V L + YY LD P+ D +YDR+ L L+ Q+P L D Sbjct: 3 QMT-SEAQL-VRELRLLLQQASYAYYVLDAPVMEDMVYDRLYRELQELETQYPYLVTPDS 60 Query: 113 PWNTVG 118 P VG Sbjct: 61 PTQRVG 66 >gi|241896133|ref|ZP_04783429.1| NAD-dependent DNA ligase [Weissella paramesenteroides ATCC 33313] gi|241870647|gb|EER74398.1| NAD-dependent DNA ligase [Weissella paramesenteroides ATCC 33313] Length = 675 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 31/70 (44%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 +V EA ++E L K YY D P D YD+V +RL L+ FPEL Sbjct: 2 TEVALTDPTEAAQQMEKLQLQLQQWAKEYYENDSPTVEDAEYDKVYKRLQELEAAFPELV 61 Query: 109 DEDHPWNTVG 118 + D VG Sbjct: 62 NPDSITQQVG 71 >gi|196045221|ref|ZP_03112453.1| DNA ligase, NAD-dependent [Bacillus cereus 03BB108] gi|196023805|gb|EDX62480.1| DNA ligase, NAD-dependent [Bacillus cereus 03BB108] Length = 669 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIVKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|206967609|ref|ZP_03228565.1| DNA ligase, NAD-dependent [Bacillus cereus AH1134] gi|228950848|ref|ZP_04112971.1| DNA ligase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229068048|ref|ZP_04201356.1| DNA ligase [Bacillus cereus F65185] gi|229077651|ref|ZP_04210281.1| DNA ligase [Bacillus cereus Rock4-2] gi|229176884|ref|ZP_04304280.1| DNA ligase [Bacillus cereus 172560W] gi|206736529|gb|EDZ53676.1| DNA ligase, NAD-dependent [Bacillus cereus AH1134] gi|228606557|gb|EEK63982.1| DNA ligase [Bacillus cereus 172560W] gi|228705592|gb|EEL57948.1| DNA ligase [Bacillus cereus Rock4-2] gi|228715056|gb|EEL66923.1| DNA ligase [Bacillus cereus F65185] gi|228808777|gb|EEM55273.1| DNA ligase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 669 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIVKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|164686703|ref|ZP_02210731.1| hypothetical protein CLOBAR_00298 [Clostridium bartlettii DSM 16795] gi|164604093|gb|EDQ97558.1| hypothetical protein CLOBAR_00298 [Clostridium bartlettii DSM 16795] Length = 674 Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 31/60 (51%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A +E L+ + +H + YY D P D YD + + L L+E+ PEL D P N VG Sbjct: 3 AQKRIEELINLINYHNEKYYNQDSPEIEDFEYDNLMKELIKLEEENPELKRNDSPSNRVG 62 >gi|324324305|gb|ADY19565.1| NAD-dependent DNA ligase LigA [Bacillus thuringiensis serovar finitimus YBT-020] Length = 669 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIVKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|148927169|ref|ZP_01810794.1| DNA ligase, NAD-dependent [candidate division TM7 genomosp. GTL1] gi|147887384|gb|EDK72833.1| DNA ligase, NAD-dependent [candidate division TM7 genomosp. GTL1] Length = 675 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 28/65 (43%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++K L ++ + YY LD P D +YD + L L+ + PEL D P Sbjct: 1 MTKPHLRERAIKLRELLSQYSYEYYVLDRPSVADAIYDSLFGELKKLEAEHPELITADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|295394422|ref|ZP_06804646.1| NAD-dependent DNA ligase LigA [Brevibacterium mcbrellneri ATCC 49030] gi|294972774|gb|EFG48625.1| NAD-dependent DNA ligase LigA [Brevibacterium mcbrellneri ATCC 49030] Length = 740 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 29/71 (40%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + L E L H++ YY D P +D +D + L+ L+ +PEL Sbjct: 11 SADPAELEPAERQKLAAELAAQIEEHREAYYVHDAPKISDKEFDELVHALEDLESAYPEL 70 Query: 108 FDEDHPWNTVG 118 +D P VG Sbjct: 71 ARDDSPTQKVG 81 >gi|148240764|ref|YP_001226151.1| NAD-dependent DNA ligase LigA [Synechococcus sp. WH 7803] gi|166216252|sp|A5GPI9|DNLJ_SYNPW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|147849303|emb|CAK24854.1| NAD-dependent DNA ligase [Synechococcus sp. WH 7803] Length = 698 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 54 LSKGEAMIE-VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +S + + E L ++ YY LD P D +YDR+ L L+ PEL + D Sbjct: 1 MSIPQGLQERAAELRQLLNRAAHAYYVLDAPDLEDSVYDRLYRELLDLEAAHPELVEADS 60 Query: 113 PWNTVG 118 P VG Sbjct: 61 PTQRVG 66 >gi|283458551|ref|YP_003363181.1| NAD-dependent DNA ligase [Rothia mucilaginosa DY-18] gi|283134596|dbj|BAI65361.1| NAD-dependent DNA ligase [Rothia mucilaginosa DY-18] Length = 747 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 1/80 (1%) Query: 39 RALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 RA + A+ +++ E L ++ YY D P +D YD + RL+ Sbjct: 16 RAESPAENAAENTAEITEA-LRAEYAELTDKIRAARRAYYNEDAPFLSDAEYDALYRRLE 74 Query: 99 ALQEQFPELFDEDHPWNTVG 118 ++ + P L D P VG Sbjct: 75 IIEAEHPHLIANDSPTQEVG 94 >gi|83816597|ref|YP_445022.1| DNA ligase, NAD-dependent [Salinibacter ruber DSM 13855] gi|123739757|sp|Q2S459|DNLJ_SALRD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|83757991|gb|ABC46104.1| DNA ligase, NAD-dependent [Salinibacter ruber DSM 13855] Length = 690 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 28/49 (57%) Query: 70 ALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY LD P+ +D YDR+ ++L L+ ++P L D P + VG Sbjct: 32 LRHHNYRYYVLDAPVVSDAEYDRLFQQLQTLEAEYPVLQTPDSPTHQVG 80 >gi|7674018|sp|Q9ZFY8|DNLJ_THESK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|4235370|gb|AAD13188.1| NAD-dependent DNA ligase [Thermus sp. AK16D] Length = 674 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ EA V L + +H YY LD P +D YDR+ L L+E+FPEL D P Sbjct: 1 MTLEEARRRVNELRDLIRYHNYLYYVLDAPEISDAEYDRLLRELKELEERFPELKSPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TEQVG 65 >gi|167752039|ref|ZP_02424166.1| hypothetical protein ALIPUT_00281 [Alistipes putredinis DSM 17216] gi|167660280|gb|EDS04410.1| hypothetical protein ALIPUT_00281 [Alistipes putredinis DSM 17216] Length = 712 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 +KG ++E L + +H YY + P +D +D + L L+ PE D + P Sbjct: 8 NKGMIREKIEELRRTLDYHNHKYYVENSPEISDREFDVLMRELQELEAAHPEYADPNSPT 67 Query: 115 NTVG 118 VG Sbjct: 68 ARVG 71 >gi|282856148|ref|ZP_06265431.1| DNA ligase (NAD(+)) [Pyramidobacter piscolens W5455] gi|282585907|gb|EFB91192.1| DNA ligase (NAD(+)) [Pyramidobacter piscolens W5455] Length = 681 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 28/63 (44%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + E + +LV H + YY LD P D YD + + + + P+L +D P Sbjct: 5 EREKLDRYYWLVDELNRHGRLYYVLDAPEIEDDEYDALMREMLQFEREHPDLIRDDSPSK 64 Query: 116 TVG 118 VG Sbjct: 65 RVG 67 >gi|281414409|ref|ZP_06246151.1| DNA ligase, NAD-dependent [Micrococcus luteus NCTC 2665] Length = 248 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 30/71 (42%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + + E E LV+ + YY+ D P +D YD + RL+ L+ PEL Sbjct: 10 QPDPQDIPAADLREEYEDLVERVRAARTAYYQRDAPEISDAEYDALYRRLEDLEALHPEL 69 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 70 VSNDSPTQEVG 80 >gi|222055066|ref|YP_002537428.1| DNA ligase, NAD-dependent [Geobacter sp. FRC-32] gi|254781339|sp|B9M861|DNLJ_GEOSF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|221564355|gb|ACM20327.1| DNA ligase, NAD-dependent [Geobacter sp. FRC-32] Length = 669 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + A + ++ L + H YY D P TD YD + L L+++FP+L D P Sbjct: 1 MDRTAAQLRIQELHREINRHNYLYYVEDRPEITDAEYDLLLRELQQLEKEFPDLVTADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|294673321|ref|YP_003573937.1| DNA ligase (NAD(+)) [Prevotella ruminicola 23] gi|294473291|gb|ADE82680.1| DNA ligase (NAD(+)) [Prevotella ruminicola 23] Length = 674 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + +E L K H YY L+ P D +D + L L+ + PE+ D + P VG Sbjct: 4 IKRIEQLRKELHEHNYKYYVLNQPTIGDQEFDFMMHELQDLEAKHPEMADPNSPTQRVG 62 >gi|265753576|ref|ZP_06088931.1| DNA ligase, NAD-dependent [Bacteroides sp. 3_1_33FAA] gi|263235290|gb|EEZ20814.1| DNA ligase, NAD-dependent [Bacteroides sp. 3_1_33FAA] Length = 665 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + ++ L + H YY L+ P TD +D++ L L+E+ PE DE+ P VG Sbjct: 4 IERIDQLREELHRHNYNYYVLNAPEITDQEFDKLMRELQDLEEKHPEHRDENSPSMRVG 62 >gi|271969279|ref|YP_003343475.1| DNA ligase (NAD(+)) [Streptosporangium roseum DSM 43021] gi|270512454|gb|ACZ90732.1| DNA ligase (NAD(+)) [Streptosporangium roseum DSM 43021] Length = 726 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A+ L ++ Y+ LD P +D YD L ++E+ P L D P VG Sbjct: 12 ALDRHAELTELVEQANWRYHVLDSPTVSDAQYDTWMRELRGIEEEHPSLRTPDSPTQKVG 71 >gi|168705071|ref|ZP_02737348.1| NAD-dependent DNA ligase [Gemmata obscuriglobus UQM 2246] Length = 678 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 23/59 (38%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L K HH YY P+ +D +D + + L ++ P L D P VG Sbjct: 10 AERAAELRKQLDHHNYLYYVEAAPVISDREFDTLLKELADIERANPGLVTPDSPTQRVG 68 >gi|229015686|ref|ZP_04172669.1| DNA ligase [Bacillus cereus AH1273] gi|229021878|ref|ZP_04178448.1| DNA ligase [Bacillus cereus AH1272] gi|228739424|gb|EEL89850.1| DNA ligase [Bacillus cereus AH1272] gi|228745603|gb|EEL95622.1| DNA ligase [Bacillus cereus AH1273] Length = 669 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMGEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|312144161|ref|YP_003995607.1| DNA ligase, NAD-dependent [Halanaerobium sp. 'sapolanicus'] gi|311904812|gb|ADQ15253.1| DNA ligase, NAD-dependent [Halanaerobium sp. 'sapolanicus'] Length = 670 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 37/66 (56%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +L+K +A +++ L + + Y+ LDDP +D +D++ + L L+ QFPEL D Sbjct: 3 NLNKEKAKKKIKALREKIRKAEYRYFVLDDPQISDAEFDKLMQDLLKLESQFPELVTADS 62 Query: 113 PWNTVG 118 P VG Sbjct: 63 PTQRVG 68 >gi|310826558|ref|YP_003958915.1| DNA ligase [Eubacterium limosum KIST612] gi|308738292|gb|ADO35952.1| DNA ligase [Eubacterium limosum KIST612] Length = 666 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 +A ++ L K + YY D P+ D YDR+ + L +L+ +P+ D P Sbjct: 6 KQAEAKISQLKKQIEENNVRYYDKDAPVIPDYAYDRMMQELISLETAYPQFLTSDSPSQR 65 Query: 117 VG 118 VG Sbjct: 66 VG 67 >gi|258544861|ref|ZP_05705095.1| DNA ligase, NAD-dependent [Cardiobacterium hominis ATCC 15826] gi|258519884|gb|EEV88743.1| DNA ligase, NAD-dependent [Cardiobacterium hominis ATCC 15826] Length = 668 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 24/57 (42%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + H YY LD+PL D YD + L AL+ E D P VG Sbjct: 6 RLAALREEIRAHDHAYYVLDNPLIADAEYDALLRELRALEAASGEPVPADSPSQRVG 62 >gi|237709923|ref|ZP_04540404.1| DNA ligase [Bacteroides sp. 9_1_42FAA] gi|229456016|gb|EEO61737.1| DNA ligase [Bacteroides sp. 9_1_42FAA] Length = 665 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + ++ L + H YY L+ P TD +D++ L L+E+ PE DE+ P VG Sbjct: 4 IERIDQLREELHRHNYNYYVLNAPEITDQEFDKLMRELQDLEEKHPEHRDENSPSMRVG 62 >gi|212693183|ref|ZP_03301311.1| hypothetical protein BACDOR_02690 [Bacteroides dorei DSM 17855] gi|212664288|gb|EEB24860.1| hypothetical protein BACDOR_02690 [Bacteroides dorei DSM 17855] Length = 665 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + ++ L + H YY L+ P TD +D++ L L+E+ PE DE+ P VG Sbjct: 4 IERIDQLREELHRHNYNYYVLNAPEITDQEFDKLMRELQDLEEKHPEHRDENSPSMRVG 62 >gi|50364975|ref|YP_053400.1| DNA ligase, polydeoxyribonucleotide synthase NAD+ [Mesoplasma florum L1] gi|81391966|sp|Q6F1V7|DNLJ_MESFL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|50363531|gb|AAT75516.1| DNA ligase, polydeoxyribonucleotide synthase NAD+ [Mesoplasma florum L1] Length = 666 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++K +A + L K YY LD+P D YD+ +L L+ QFPEL D Sbjct: 1 MTKEQASKLINDLRLKLNEWAKEYYVLDNPSVDDAEYDKTIHQLLDLENQFPELITSDSI 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQKVG 65 >gi|294776463|ref|ZP_06741938.1| DNA ligase (NAD(+)) [Bacteroides vulgatus PC510] gi|294449660|gb|EFG18185.1| DNA ligase (NAD(+)) [Bacteroides vulgatus PC510] Length = 665 Score = 88.8 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + ++ L + H YY L+ P TD +D++ L L+E+ PE DE+ P VG Sbjct: 4 IERIDQLREELHRHNYNYYVLNAPEITDQEFDKLMRELQDLEEKHPEHRDENSPSMRVG 62 >gi|150005810|ref|YP_001300554.1| DNA ligase [Bacteroides vulgatus ATCC 8482] gi|237725408|ref|ZP_04555889.1| DNA ligase [Bacteroides sp. D4] gi|319640984|ref|ZP_07995691.1| DNA ligase [Bacteroides sp. 3_1_40A] gi|166215396|sp|A6L5G8|DNLJ_BACV8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|149934234|gb|ABR40932.1| DNA ligase [Bacteroides vulgatus ATCC 8482] gi|229436095|gb|EEO46172.1| DNA ligase [Bacteroides dorei 5_1_36/D4] gi|317387362|gb|EFV68234.1| DNA ligase [Bacteroides sp. 3_1_40A] Length = 665 Score = 88.8 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + ++ L + H YY L+ P TD +D++ L L+E+ PE DE+ P VG Sbjct: 4 IERIDQLREELHRHNYNYYVLNAPEITDQEFDKLMRELQDLEEKHPEHRDENSPSMRVG 62 >gi|88809499|ref|ZP_01125007.1| DNA ligase [Synechococcus sp. WH 7805] gi|88786718|gb|EAR17877.1| DNA ligase [Synechococcus sp. WH 7805] Length = 692 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 25/59 (42%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L ++ YY LD P D +YDR+ L L+ PEL + D P VG Sbjct: 2 QERAAELRQLLNRAAHAYYVLDAPDLEDAVYDRLYRELLDLESAHPELVEADSPTQRVG 60 >gi|254882009|ref|ZP_05254719.1| polydeoxyribonucleotide synthase [Bacteroides sp. 4_3_47FAA] gi|254834802|gb|EET15111.1| polydeoxyribonucleotide synthase [Bacteroides sp. 4_3_47FAA] Length = 665 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + ++ L + H YY L+ P TD +D++ L L+E+ PE DE+ P VG Sbjct: 4 IERIDQLREELHRHNYNYYVLNAPEITDQEFDKLMRELQDLEEKHPEHRDENSPSMRVG 62 >gi|220904693|ref|YP_002480005.1| DNA ligase, NAD-dependent [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254781312|sp|B8J0Q0|DNLJ_DESDA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219868992|gb|ACL49327.1| DNA ligase, NAD-dependent [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 712 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 GE V++L H Y+ LD P +D +D + L L+ ++PEL P Sbjct: 23 GEERRRVQWLTAELERHNHLYHTLDRPEISDDQFDALFRELQDLETRWPELRSLHSPTLR 82 Query: 117 VG 118 VG Sbjct: 83 VG 84 >gi|229587074|ref|YP_002845575.1| NAD-dependent DNA ligase LigA [Rickettsia africae ESF-5] gi|254781406|sp|C3PLJ2|DNLJ_RICAE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|228022124|gb|ACP53832.1| DNA ligase, NAD-dependent [Rickettsia africae ESF-5] Length = 689 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 35/70 (50%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 + + +S+ EA +E L + YY D+PL +D YD++ L+++FP L Sbjct: 2 QNIDLISEEEAQKLLEELADKIAAYNHAYYIEDNPLVSDSEYDQLFNTNLKLEQKFPHLI 61 Query: 109 DEDHPWNTVG 118 E+ P VG Sbjct: 62 LENSPSKKVG 71 >gi|325288193|ref|YP_004263983.1| DNA ligase [Cellulophaga lytica DSM 7489] gi|324323647|gb|ADY31112.1| DNA ligase [Cellulophaga lytica DSM 7489] Length = 664 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 29/60 (48%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L + H YY LD P +D +D + L AL+ + PE +D + P VG Sbjct: 3 VKEQIEALREELRKHNHNYYVLDTPTISDYDFDIKLKELQALEAKHPEFYDANSPTLRVG 62 >gi|313159317|gb|EFR58681.1| DNA ligase (NAD+) [Alistipes sp. HGB5] Length = 694 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L + +H YY + P +D +D + L L+ PE+ D + P VG Sbjct: 2 IRERIEELRRQLEYHNFRYYVENAPEISDFEFDAMMRELQDLERAHPEMADPNSPSVRVG 61 >gi|303239321|ref|ZP_07325849.1| DNA ligase, NAD-dependent [Acetivibrio cellulolyticus CD2] gi|302593107|gb|EFL62827.1| DNA ligase, NAD-dependent [Acetivibrio cellulolyticus CD2] Length = 663 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 30/61 (49%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + +E L K +H YY DD +D YD++S L L+++ PEL + P V Sbjct: 2 DIKKRIEELRKTIEYHNDRYYNQDDAEISDYEYDQLSLELRKLEQEHPELALTNSPTQKV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|314966144|gb|EFT10243.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL082PA2] Length = 740 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 25/56 (44%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + L Q YY D P +D YDR+ L +++ PEL D P VG Sbjct: 24 WTELAQRILDAQDAYYASDAPTISDAEYDRLMVELKKVEDDHPELRTPDSPTQRVG 79 >gi|300173629|ref|YP_003772795.1| DNA ligase, NAD-dependent [Leuconostoc gasicomitatum LMG 18811] gi|299888008|emb|CBL91976.1| DNA ligase, NAD-dependent [Leuconostoc gasicomitatum LMG 18811] Length = 681 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 35/74 (47%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 L + K + LS+ A E+ L + YY D P+ D +YD + RL AL+ F Sbjct: 2 LPELKPIEKLSREAAQHEIAKLQDDLRQYGIAYYEQDAPIVEDYIYDALYARLVALETVF 61 Query: 105 PELFDEDHPWNTVG 118 P+ + D P VG Sbjct: 62 PQFINPDSPTQNVG 75 >gi|315223028|ref|ZP_07864907.1| DNA ligase, NAD-dependent [Streptococcus anginosus F0211] gi|315187978|gb|EFU21714.1| DNA ligase, NAD-dependent [Streptococcus anginosus F0211] Length = 652 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LVK+ + YY D+P +D YDR+ L L++Q+PEL D P + VG Sbjct: 2 KDRMLELVKLLNQYAHEYYTTDNPTVSDSEYDRLYHELLDLEQQYPELVQADSPTHRVG 60 >gi|260584784|ref|ZP_05852529.1| DNA ligase, NAD-dependent [Granulicatella elegans ATCC 700633] gi|260157441|gb|EEW92512.1| DNA ligase, NAD-dependent [Granulicatella elegans ATCC 700633] Length = 668 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +V+ L + YY D P TD YD L L+ ++P+L D P VG Sbjct: 5 IEQKVQQLREQLNRWSHEYYVQDRPTVTDHEYDETYHELVRLETEYPQLVTSDSPTQRVG 64 >gi|256852262|ref|ZP_05557648.1| DNA ligase, NAD-dependent [Lactobacillus jensenii 27-2-CHN] gi|260661706|ref|ZP_05862617.1| DNA ligase, NAD-dependent [Lactobacillus jensenii 115-3-CHN] gi|282934844|ref|ZP_06340077.1| DNA ligase (NAD(+)) [Lactobacillus jensenii 208-1] gi|297205571|ref|ZP_06922967.1| NAD-dependent DNA ligase LigA [Lactobacillus jensenii JV-V16] gi|256615308|gb|EEU20499.1| DNA ligase, NAD-dependent [Lactobacillus jensenii 27-2-CHN] gi|260547453|gb|EEX23432.1| DNA ligase, NAD-dependent [Lactobacillus jensenii 115-3-CHN] gi|281301075|gb|EFA93386.1| DNA ligase (NAD(+)) [Lactobacillus jensenii 208-1] gi|297150149|gb|EFH30446.1| NAD-dependent DNA ligase LigA [Lactobacillus jensenii JV-V16] Length = 669 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 33/67 (49%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 L+K A E+E L K + YY D P D +YD+ ++L L++QFPEL D Sbjct: 2 AKLNKKNAQEEIETLRKKLNTWAEQYYAQDAPSVEDAVYDQNYQKLVELEKQFPELVTPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|24216818|ref|NP_714299.1| NAD dependent DNA ligase [Leptospira interrogans serovar Lai str. 56601] gi|81465271|sp|Q8EYU4|DNLJ_LEPIN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|24198185|gb|AAN51317.1| NAD dependent DNA ligase [Leptospira interrogans serovar Lai str. 56601] Length = 681 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 35/67 (52%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 +LS+ EA + L HHQ YY +DP +D +D++ RL L+E+FP+ D Sbjct: 10 KTLSEKEAKGLIAKLSDEIRHHQYLYYVKNDPKISDFDFDQLFRRLQDLEEEFPQFKDLA 69 Query: 112 HPWNTVG 118 P VG Sbjct: 70 SPTLVVG 76 >gi|269957188|ref|YP_003326977.1| DNA ligase, NAD-dependent [Xylanimonas cellulosilytica DSM 15894] gi|269305869|gb|ACZ31419.1| DNA ligase, NAD-dependent [Xylanimonas cellulosilytica DSM 15894] Length = 830 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 26/67 (38%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 L + A L + Q+ YY D PL +D YD L AL+ P L + Sbjct: 9 AELDEQAAQRRWAELRDLVEADQRAYYEHDSPLVSDAEYDARLHELAALEAAHPALATPE 68 Query: 112 HPWNTVG 118 P VG Sbjct: 69 SPTQRVG 75 >gi|45659103|ref|YP_003189.1| NAD dependent DNA ligase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|81406496|sp|Q72MA6|DNLJ_LEPIC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|45602349|gb|AAS71826.1| NAD dependent DNA ligase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 681 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 35/67 (52%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 +LS+ EA + L HHQ YY +DP +D +D++ RL L+E+FP+ D Sbjct: 10 KTLSEKEAKGLIAKLSDEIRHHQYLYYVKNDPKISDFDFDQLFRRLQDLEEEFPQFKDLA 69 Query: 112 HPWNTVG 118 P VG Sbjct: 70 SPTLVVG 76 >gi|290957204|ref|YP_003488386.1| DNA ligase [Streptomyces scabiei 87.22] gi|260646730|emb|CBG69827.1| putative DNA ligase [Streptomyces scabiei 87.22] Length = 739 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + L + H+ YY D P+ +D +D + L+AL++++ EL D P V Sbjct: 23 REKHARLAEQIEEHRFRYYVKDAPVVSDAEFDELLRTLEALEDEYGELRTPDSPTQKV 80 >gi|239982451|ref|ZP_04704975.1| NAD-dependent DNA ligase LigA [Streptomyces albus J1074] Length = 728 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 29/62 (46%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 +A ++L + H+ YY D P+ +D +DR L L+EQ+P L D P Sbjct: 11 PADARERHKHLAEQVEEHRFRYYVNDQPVVSDAEFDRQLRALTQLEEQYPPLRTPDSPTQ 70 Query: 116 TV 117 V Sbjct: 71 KV 72 >gi|282896837|ref|ZP_06304843.1| NAD-dependent DNA ligase [Raphidiopsis brookii D9] gi|281198246|gb|EFA73136.1| NAD-dependent DNA ligase [Raphidiopsis brookii D9] Length = 692 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 29/58 (50%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 VE L K+ YY LD P+ D +YDR+ L L++++P L D P VG Sbjct: 12 QRVEELRKLLQQAGYAYYVLDSPIMEDTIYDRLYRELQELEKKYPNLVTSDSPTQRVG 69 >gi|315095035|gb|EFT67011.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL060PA1] Length = 740 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 25/56 (44%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + L Q YY D P +D YDR+ L +++ PEL D P VG Sbjct: 24 WTELAQRILDAQDAYYASDAPTISDAEYDRLMVELKKVEDDHPELRTPDSPTQRVG 79 >gi|314923733|gb|EFS87564.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL001PA1] gi|315104373|gb|EFT76349.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL050PA2] gi|327328187|gb|EGE69956.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL103PA1] Length = 740 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 25/56 (44%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + L Q YY D P +D YDR+ L +++ PEL D P VG Sbjct: 24 WTELAQRILDAQDAYYASDAPTISDAEYDRLMVELKKVEDDHPELRTPDSPTQRVG 79 >gi|282854737|ref|ZP_06264072.1| DNA ligase (NAD(+)) [Propionibacterium acnes J139] gi|282582319|gb|EFB87701.1| DNA ligase (NAD(+)) [Propionibacterium acnes J139] gi|314982008|gb|EFT26101.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL110PA3] gi|315090823|gb|EFT62799.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL110PA4] Length = 740 Score = 88.4 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 25/56 (44%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + L Q YY D P +D YDR+ L +++ PEL D P VG Sbjct: 24 WTELAQRILDAQDAYYASDAPTISDAEYDRLMVELKKVEDDHPELRTPDSPTQRVG 79 >gi|291454298|ref|ZP_06593688.1| NAD-dependent DNA ligase LigA [Streptomyces albus J1074] gi|291357247|gb|EFE84149.1| NAD-dependent DNA ligase LigA [Streptomyces albus J1074] Length = 736 Score = 88.0 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 29/62 (46%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 +A ++L + H+ YY D P+ +D +DR L L+EQ+P L D P Sbjct: 19 PADARERHKHLAEQVEEHRFRYYVNDQPVVSDAEFDRQLRALTQLEEQYPPLRTPDSPTQ 78 Query: 116 TV 117 V Sbjct: 79 KV 80 >gi|170079241|ref|YP_001735879.1| DNA ligase, NAD-dependent [Synechococcus sp. PCC 7002] gi|254781436|sp|B1XLV0|DNLJ_SYNP2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|169886910|gb|ACB00624.1| DNA ligase, NAD-dependent [Synechococcus sp. PCC 7002] Length = 678 Score = 88.0 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 24/57 (42%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L YY LD P D +YD++ L AL+ P+L D P +G Sbjct: 8 RLAQLRSQLQKAAYAYYVLDAPFMEDAVYDQLYRELVALETAHPQLITPDSPTQRIG 64 >gi|238650378|ref|YP_002916230.1| NAD-dependent DNA ligase LigA [Rickettsia peacockii str. Rustic] gi|257096313|sp|C4K0T1|DNLJ_RICPU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|238624476|gb|ACR47182.1| NAD-dependent DNA ligase LigA [Rickettsia peacockii str. Rustic] Length = 689 Score = 88.0 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 35/70 (50%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 + + +S+ EA +E L + YY D+PL +D YD++ L+++FP L Sbjct: 2 QNIDLISEEEAQKLLEELADKIAAYNHAYYIEDNPLVSDSEYDQLFNTNLKLEQKFPHLI 61 Query: 109 DEDHPWNTVG 118 E+ P VG Sbjct: 62 LENSPSKKVG 71 >gi|15893019|ref|NP_360733.1| NAD-dependent DNA ligase LigA [Rickettsia conorii str. Malish 7] gi|81527939|sp|Q92GM7|DNLJ_RICCN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|15620219|gb|AAL03634.1| DNA ligase [Rickettsia conorii str. Malish 7] Length = 689 Score = 88.0 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 35/70 (50%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 + + +S+ EA +E L + YY D+PL +D YD++ L+++FP L Sbjct: 2 QNIDLISEEEAQKLLEELADKIAAYNHAYYIEDNPLVSDSEYDQLFNTNLKLEQKFPHLI 61 Query: 109 DEDHPWNTVG 118 E+ P VG Sbjct: 62 LENSPSKKVG 71 >gi|282899989|ref|ZP_06307949.1| NAD-dependent DNA ligase [Cylindrospermopsis raciborskii CS-505] gi|281195087|gb|EFA70024.1| NAD-dependent DNA ligase [Cylindrospermopsis raciborskii CS-505] Length = 690 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 29/58 (50%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 VE L K+ YY LD P+ D +YDR+ L L++++P L D P VG Sbjct: 12 QRVEELRKLLQQASYAYYVLDSPIMEDTIYDRLYRELQELEKKYPNLVTTDSPTQRVG 69 >gi|313836700|gb|EFS74414.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL037PA2] gi|314929893|gb|EFS93724.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL044PA1] gi|314972321|gb|EFT16418.1| DNA ligase, NAD-dependent [Propionibacterium acnes HL037PA3] gi|328907750|gb|EGG27514.1| NAD-dependent DNA ligase LigA [Propionibacterium sp. P08] Length = 740 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 EA L + L Q YY D P +D YD++ L +++ PEL D P Sbjct: 18 AEARHRWTELAQRILDAQDAYYANDAPTMSDAAYDQLMVELKKVEDDHPELRSPDSPTQR 77 Query: 117 VG 118 VG Sbjct: 78 VG 79 >gi|83951899|ref|ZP_00960631.1| DNA ligase, NAD-dependent [Roseovarius nubinhibens ISM] gi|83836905|gb|EAP76202.1| DNA ligase, NAD-dependent [Roseovarius nubinhibens ISM] Length = 748 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 34/74 (45%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + + V L++ A E+ L + Y+ D P +D YD + +R ++ +F Sbjct: 1 MAETTAVERLTEDAARAELARLADLLQRANAAYHGADAPEISDAEYDALKQRNAEIEARF 60 Query: 105 PELFDEDHPWNTVG 118 PEL +D P VG Sbjct: 61 PELKRDDSPSEQVG 74 >gi|210630510|ref|ZP_03296493.1| hypothetical protein COLSTE_00378 [Collinsella stercoris DSM 13279] gi|210160444|gb|EEA91415.1| hypothetical protein COLSTE_00378 [Collinsella stercoris DSM 13279] Length = 756 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 24/54 (44%) Query: 65 YLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + +H YY LD P +D +D++ L ++ PEL D VG Sbjct: 53 ELRHLLDYHAYRYYALDAPEISDAAFDKLLIELQQIEAAHPELVTPDSYTQRVG 106 >gi|148263373|ref|YP_001230079.1| DNA ligase, NAD-dependent [Geobacter uraniireducens Rf4] gi|190359259|sp|A5GA98|DNLJ_GEOUR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|146396873|gb|ABQ25506.1| DNA ligase, NAD-dependent [Geobacter uraniireducens Rf4] Length = 672 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 28/65 (43%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A ++ L K H YY D P D YD + L L++ +P+L D P Sbjct: 1 MDKQAAERRIQELHKEINRHNYLYYVEDRPEINDAEYDLLLRELQQLEKAYPDLVTADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|332141273|ref|YP_004427011.1| NAD-dependent DNA ligase [Alteromonas macleodii str. 'Deep ecotype'] gi|327551295|gb|AEA98013.1| NAD-dependent DNA ligase [Alteromonas macleodii str. 'Deep ecotype'] Length = 171 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 32/64 (50%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + +A +V L + YY LDDP D +YDR + L AL++Q+P L + P Sbjct: 4 TLEQARKKVAELRNTLNEYNYQYYVLDDPSIPDAVYDRDMQSLIALEKQYPSLQSPNSPS 63 Query: 115 NTVG 118 VG Sbjct: 64 QKVG 67 >gi|157828943|ref|YP_001495185.1| NAD-dependent DNA ligase LigA [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933668|ref|YP_001650457.1| NAD-dependent DNA ligase LigA [Rickettsia rickettsii str. Iowa] gi|166216235|sp|A8GTF2|DNLJ_RICRS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190359278|sp|B0BUZ1|DNLJ_RICRO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157801424|gb|ABV76677.1| NAD-dependent DNA ligase LigA [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908755|gb|ABY73051.1| NAD-dependent DNA ligase [Rickettsia rickettsii str. Iowa] Length = 689 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 35/70 (50%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 + + +S+ EA +E L + YY D+PL +D YD++ L+++FP L Sbjct: 2 QNIDLISEEEAQKLLEELADKIAAYNHAYYIEDNPLVSDSEYDQLFNTNLKLEQKFPHLI 61 Query: 109 DEDHPWNTVG 118 E+ P VG Sbjct: 62 LENSPSKKVG 71 >gi|238020272|ref|ZP_04600698.1| hypothetical protein GCWU000324_00147 [Kingella oralis ATCC 51147] gi|237868666|gb|EEP69670.1| hypothetical protein GCWU000324_00147 [Kingella oralis ATCC 51147] Length = 797 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 31/63 (49%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 +A +++ L + YY LD P D YDR+ L+AL+ ++P+ + P N Sbjct: 20 PQQAQQKIQTLTAQLNQYAHEYYTLDAPTVPDSEYDRLYRELEALETEYPQFRLPESPTN 79 Query: 116 TVG 118 VG Sbjct: 80 RVG 82 >gi|56966057|pdb|1TA8|A Chain A, Structural Rearrangement Accompanying Nad+ Synthesis Within A Bacterial Dna Ligase Crystal Length = 332 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ A + L K + YY D P D +YDR+ + L ++ +FP+L D P Sbjct: 6 LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSP 65 Query: 114 WNTVG 118 VG Sbjct: 66 TQRVG 70 >gi|322368190|ref|ZP_08042759.1| NAD-dependent DNA ligase LigA [Haladaptatus paucihalophilus DX253] gi|320552206|gb|EFW93851.1| NAD-dependent DNA ligase LigA [Haladaptatus paucihalophilus DX253] Length = 685 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Query: 41 LESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +E + V + + A + E L + HH YY +DP D YD + RL L Sbjct: 12 VEEPDTDFEPVAEMDEAGASEQAELLREAIRHHDYRYYVENDPRIGDRTYDALFTRLQEL 71 Query: 101 QEQFPELFDEDHPWNTVG 118 +E F ++ D P VG Sbjct: 72 EEAF-DVQTPDSPTRRVG 88 >gi|302670775|ref|YP_003830735.1| NAD-dependent DNA ligase LigA1 [Butyrivibrio proteoclasticus B316] gi|302395248|gb|ADL34153.1| NAD-dependent DNA ligase LigA1 [Butyrivibrio proteoclasticus B316] Length = 675 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E + LV HH YY D+P +D YD++ RL ++ ++PEL D P Sbjct: 6 EEIRNNYDALVSEIKHHMDLYYNQDEPEISDYEYDQLMIRLKKMESEYPELVSNDSPSQI 65 Query: 117 VG 118 VG Sbjct: 66 VG 67 >gi|34581289|ref|ZP_00142769.1| DNA ligase [Rickettsia sibirica 246] gi|28262674|gb|EAA26178.1| DNA ligase [Rickettsia sibirica 246] Length = 689 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 35/70 (50%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 + + +S+ EA +E L + YY D+PL +D YD++ L+++FP L Sbjct: 2 QNIDLISEEEAQKLLEELADKIAAYNHAYYIEDNPLVSDSEYDQLFNTNLKLEQKFPHLI 61 Query: 109 DEDHPWNTVG 118 E+ P VG Sbjct: 62 LENSPSKKVG 71 >gi|330718928|ref|ZP_08313528.1| DNA ligase, NAD-dependent [Leuconostoc fallax KCTC 3537] Length = 681 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 33/74 (44%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 L + K V+ L+ +A E+ L + YY D+P D +YD RL L+ F Sbjct: 2 LPEFKAVSELTTAQAQQEIAKLQDDLTRYGVEYYEDDNPSVEDHVYDAFYARLVDLEAAF 61 Query: 105 PELFDEDHPWNTVG 118 P+ + P VG Sbjct: 62 PQFMTPESPTQRVG 75 >gi|218961271|ref|YP_001741046.1| DNA ligase, NAD-dependent [Candidatus Cloacamonas acidaminovorans] gi|167729928|emb|CAO80840.1| DNA ligase, NAD-dependent [Candidatus Cloacamonas acidaminovorans] Length = 667 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++K E ++ L HH + YY L P +D YD + + L L+ Q+ E E+ P Sbjct: 1 MNKNELKARIDRLRAEIEHHNRLYYTLAKPEISDYEYDMLVKELQELEAQYAEGAVEESP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQKVG 65 >gi|319779225|ref|YP_004130138.1| DNA ligase [Taylorella equigenitalis MCE9] gi|317109249|gb|ADU91995.1| DNA ligase [Taylorella equigenitalis MCE9] Length = 681 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 25/56 (44%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L + H K YY D+P +D YD + +L ++ PE D P VG Sbjct: 9 YEALKSLISVHDKAYYIDDNPQISDEEYDGLMRKLLDYEQAHPEWVTSDSPSQRVG 64 >gi|326776439|ref|ZP_08235704.1| DNA ligase, NAD-dependent [Streptomyces cf. griseus XylebKG-1] gi|326656772|gb|EGE41618.1| DNA ligase, NAD-dependent [Streptomyces cf. griseus XylebKG-1] Length = 743 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + + L + H+ YY D P+ +D +DR L+AL+E+ P L D P Sbjct: 14 PADVREKHALLAEQIEEHRFRYYVKDQPVVSDADFDRQLRSLEALEEEHPSLRTPDSPTQ 73 Query: 116 TV 117 V Sbjct: 74 KV 75 >gi|182435814|ref|YP_001823533.1| NAD-dependent DNA ligase LigA [Streptomyces griseus subsp. griseus NBRC 13350] gi|254778153|sp|B1VZW1|DNLJ2_STRGG RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 2 gi|178464330|dbj|BAG18850.1| putative DNA ligase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 743 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + + L + H+ YY D P+ +D +DR L+AL+E+ P L D P Sbjct: 14 PADVREKHALLAEQIEEHRFRYYVKDQPVVSDADFDRQLRSLEALEEEHPSLRTPDSPTQ 73 Query: 116 TV 117 V Sbjct: 74 KV 75 >gi|254422498|ref|ZP_05036216.1| DNA ligase, NAD-dependent [Synechococcus sp. PCC 7335] gi|196189987|gb|EDX84951.1| DNA ligase, NAD-dependent [Synechococcus sp. PCC 7335] Length = 694 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 25/61 (40%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E L YY LD P D +YDR+ L L++Q+P L D P V Sbjct: 21 EIETRAAELRSQLQKASYAYYVLDAPELPDSVYDRLYRELQTLEDQYPGLQTSDSPTQRV 80 Query: 118 G 118 G Sbjct: 81 G 81 >gi|56966058|pdb|1TAE|A Chain A, Structural Rearrangement Accompanying Nad+ Synthesis Within A Bacterial Dna Ligase Crystal gi|56966059|pdb|1TAE|B Chain B, Structural Rearrangement Accompanying Nad+ Synthesis Within A Bacterial Dna Ligase Crystal gi|56966060|pdb|1TAE|C Chain C, Structural Rearrangement Accompanying Nad+ Synthesis Within A Bacterial Dna Ligase Crystal gi|56966061|pdb|1TAE|D Chain D, Structural Rearrangement Accompanying Nad+ Synthesis Within A Bacterial Dna Ligase Crystal gi|212374930|pdb|3BA8|A Chain A, Structural Basis For The Inhibition Of Bacterial Nad+ Dependent Dna Ligase gi|212374931|pdb|3BA9|A Chain A, Structural Basis For Inhbition Of Nad-Dependent Ligase gi|212374932|pdb|3BAA|A Chain A, Structural Basis For The Inhibition Of Bacterial Nad+ Dependent Dna Ligase gi|212374933|pdb|3BAB|A Chain A, Structural Basis For The Inhibition Of Bacterial Nad+ Dependent Dna Ligase Length = 332 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ A + L K + YY D P D +YDR+ + L ++ +FP+L D P Sbjct: 6 LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLITPDSP 65 Query: 114 WNTVG 118 VG Sbjct: 66 TQRVG 70 >gi|304321380|ref|YP_003855023.1| NAD-dependent DNA ligase [Parvularcula bermudensis HTCC2503] gi|303300282|gb|ADM09881.1| NAD-dependent DNA ligase [Parvularcula bermudensis HTCC2503] Length = 727 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 LS+ EA E+ L Y D P+ TD YD + R +A++ +FP L D Sbjct: 8 EELSEAEAADELARLAHEMAAADIAYENAD-PVMTDAAYDALRRRNEAIEARFPHLRRAD 66 Query: 112 HPWNTVG 118 P VG Sbjct: 67 SPSLRVG 73 >gi|116490507|ref|YP_810051.1| NAD-dependent DNA ligase [Oenococcus oeni PSU-1] gi|122277306|sp|Q04GN6|DNLJ_OENOB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116091232|gb|ABJ56386.1| NAD-dependent DNA ligase [Oenococcus oeni PSU-1] Length = 684 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 32/72 (44%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D+ + L+ +A E+ L + YY D+P D +YD RL AL++ +P Sbjct: 5 DQFTPIEDLTFTQAQAEIRDLSDELTKWGREYYEEDNPSVEDYVYDAHYARLVALEKAYP 64 Query: 106 ELFDEDHPWNTV 117 L D P V Sbjct: 65 SLAMPDSPTQHV 76 >gi|290889907|ref|ZP_06552994.1| hypothetical protein AWRIB429_0384 [Oenococcus oeni AWRIB429] gi|290480517|gb|EFD89154.1| hypothetical protein AWRIB429_0384 [Oenococcus oeni AWRIB429] Length = 684 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 32/72 (44%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D+ + L+ +A E+ L + YY D+P D +YD RL AL++ +P Sbjct: 5 DQFTPIEDLTFTQAQAEIRDLSDELTKWGREYYEEDNPSVEDYVYDAHYARLVALEKAYP 64 Query: 106 ELFDEDHPWNTV 117 L D P V Sbjct: 65 SLAMPDSPTQHV 76 >gi|225025741|ref|ZP_03714933.1| hypothetical protein EIKCOROL_02645 [Eikenella corrodens ATCC 23834] gi|224941522|gb|EEG22731.1| hypothetical protein EIKCOROL_02645 [Eikenella corrodens ATCC 23834] Length = 778 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV+ + YY LD P D YDR+ L+AL+ + P+ + P VG Sbjct: 5 QQRIRTLVQTLNRYAHEYYTLDAPSVPDAEYDRLYRELEALEAEHPQFRLPESPTQRVG 63 >gi|241889713|ref|ZP_04777011.1| DNA ligase, NAD-dependent [Gemella haemolysans ATCC 10379] gi|241863335|gb|EER67719.1| DNA ligase, NAD-dependent [Gemella haemolysans ATCC 10379] Length = 663 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 34/62 (54%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ LV + + YY D+P TD YD + ++L+ L+E++PEL E+ P Sbjct: 2 KQIQEEILKLVSLLNKYSYEYYVEDNPQITDTEYDTLYKQLEKLEEKYPELILENSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|325278944|ref|YP_004251486.1| DNA ligase [Odoribacter splanchnicus DSM 20712] gi|324310753|gb|ADY31306.1| DNA ligase [Odoribacter splanchnicus DSM 20712] Length = 829 Score = 88.0 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L K +H YY + P +D +D + L+ L+E++PE++D + P VG Sbjct: 5 KDRILELRKALEYHNYKYYIENAPEISDREFDGLMHDLEKLEEKYPEMYDPNSPTQRVG 63 >gi|213962174|ref|ZP_03390438.1| DNA ligase, NAD-dependent [Capnocytophaga sputigena Capno] gi|213955180|gb|EEB66498.1| DNA ligase, NAD-dependent [Capnocytophaga sputigena Capno] Length = 663 Score = 87.6 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 32/59 (54%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L + H YY LD+P +D +D+ + L AL++ PE +DE+ P VG Sbjct: 2 KEKIQQLREELNQHNYNYYILDNPTISDYEFDQKLKELQALEQAHPEFYDENSPTVRVG 60 >gi|325972726|ref|YP_004248917.1| DNA ligase, NAD-dependent [Spirochaeta sp. Buddy] gi|324027964|gb|ADY14723.1| DNA ligase, NAD-dependent [Spirochaeta sp. Buddy] Length = 696 Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 34/61 (55%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E E+ LV+ +QK YY + PL +D YDR+ +RL AL+ Q+P L D P V Sbjct: 3 ELEHEIHSLVEQLASYQKAYYVDNRPLVSDLEYDRLFDRLVALETQYPHLKLADSPTQRV 62 Query: 118 G 118 G Sbjct: 63 G 63 >gi|118587526|ref|ZP_01544950.1| DNA ligase, NAD-dependent [Oenococcus oeni ATCC BAA-1163] gi|118431977|gb|EAV38719.1| DNA ligase, NAD-dependent [Oenococcus oeni ATCC BAA-1163] Length = 684 Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 31/72 (43%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D+ + L+ +A E+ L + YY D+P D +YD RL AL+ +P Sbjct: 5 DQFTPIEDLTFTQAQAEIRDLSDELTKWGREYYEEDNPSVEDYVYDAHYARLVALERAYP 64 Query: 106 ELFDEDHPWNTV 117 L D P V Sbjct: 65 SLAMPDSPTQHV 76 >gi|296110658|ref|YP_003621039.1| NAD-dependent DNA ligase [Leuconostoc kimchii IMSNU 11154] gi|295832189|gb|ADG40070.1| NAD-dependent DNA ligase [Leuconostoc kimchii IMSNU 11154] Length = 681 Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 33/74 (44%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 L + + L+ A E+ + L + YY D PL D +YD + RL L+ F Sbjct: 2 LPEFTPIEQLTTPMAQQEIANHQETLLQYGVAYYEQDAPLVEDYVYDALYARLVELEAAF 61 Query: 105 PELFDEDHPWNTVG 118 P+ + D P VG Sbjct: 62 PQFINPDSPTQKVG 75 >gi|315498681|ref|YP_004087485.1| DNA ligase, nad-dependent [Asticcacaulis excentricus CB 48] gi|315416693|gb|ADU13334.1| DNA ligase, NAD-dependent [Asticcacaulis excentricus CB 48] Length = 697 Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A L HH+ YY + P TD YD + + L AL+ Q+P+L D P VG Sbjct: 9 AQTRHAQLSTEIKHHRDLYYNQEAPELTDAEYDALEQELRALEAQYPDLHTVDSPTEQVG 68 >gi|226357440|ref|YP_002787179.1| NAD-dependent DNA ligase [Deinococcus deserti VCD115] gi|254778147|sp|C1D1Y6|DNLJ1_DEIDV RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 1 gi|226319430|gb|ACO47425.1| putative NAD-dependent DNA ligase [Deinococcus deserti VCD115] Length = 686 Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 23/59 (38%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L + H + YY D P D YD + L L+ + PE P TVG Sbjct: 8 AERHAWLTQKVAEHNRRYYEEDAPTIPDFEYDALVRELRELEARHPEFAAPTSPAQTVG 66 >gi|240142614|ref|YP_002967127.1| DNA ligase, NAD(+)-dependent [Methylobacterium extorquens AM1] gi|240012561|gb|ACS43786.1| DNA ligase, NAD(+)-dependent [Methylobacterium extorquens AM1] Length = 712 Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 30/72 (41%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 +A V LS +A IE L H + Y+ D P+ TD YD + R ++ P Sbjct: 8 RAVPVAELSNEDARIEHAALASEIAEHDERYHGQDAPIVTDAEYDALRRRAAEIEAAHPA 67 Query: 107 LFDEDHPWNTVG 118 L E VG Sbjct: 68 LAAESEVAKKVG 79 >gi|210621776|ref|ZP_03292805.1| hypothetical protein CLOHIR_00750 [Clostridium hiranonis DSM 13275] gi|210154540|gb|EEA85546.1| hypothetical protein CLOHIR_00750 [Clostridium hiranonis DSM 13275] Length = 678 Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K + ++++ L+ +H YY D P +D YD + + L L+ + PE D P Sbjct: 1 MGKEDIKLQIDNLIDKINYHSDKYYNQDTPEISDFEYDMLMKELIKLEAENPEFKRVDSP 60 Query: 114 WNTVG 118 N VG Sbjct: 61 SNRVG 65 >gi|257125939|ref|YP_003164053.1| DNA ligase, NAD-dependent [Leptotrichia buccalis C-1013-b] gi|257049878|gb|ACV39062.1| DNA ligase, NAD-dependent [Leptotrichia buccalis C-1013-b] Length = 706 Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF- 108 +++ + + + L +H YY D+P+ +D YD + L L++++PEL Sbjct: 17 NEKNINFSKIQEKYKKLRNEIEYHNNLYYNEDNPIISDMEYDALMRELKQLEQEYPELLE 76 Query: 109 -DEDHPWNTVG 118 E+ P +G Sbjct: 77 NSENSPTKKIG 87 >gi|304384418|ref|ZP_07366824.1| NAD-dependent DNA ligase LigA [Prevotella marshii DSM 16973] gi|304334516|gb|EFM00803.1| NAD-dependent DNA ligase LigA [Prevotella marshii DSM 16973] Length = 680 Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 6/77 (7%) Query: 42 ESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQ 101 S L K+K + +E L + H YY L+ P D +D + L L+ Sbjct: 7 LSGLLKSKNMDD------KARIEQLRRDLHAHNYKYYVLNAPTIGDQEFDEMMHELQRLE 60 Query: 102 EQFPELFDEDHPWNTVG 118 PE D + P VG Sbjct: 61 TLHPEWDDPNSPTQRVG 77 >gi|212703192|ref|ZP_03311320.1| hypothetical protein DESPIG_01234 [Desulfovibrio piger ATCC 29098] gi|212673458|gb|EEB33941.1| hypothetical protein DESPIG_01234 [Desulfovibrio piger ATCC 29098] Length = 729 Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + +L I HH Y+ LD P+ +D YD + L AL+E +P+ P V Sbjct: 58 QERMAWLTTILEHHNYLYHTLDKPVISDDQYDALFRELKALEEDYPQWRSPHSPTLRV 115 >gi|42561289|ref|NP_975740.1| DNA ligase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81400468|sp|Q6MSK8|DNLJ_MYCMS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|42492787|emb|CAE77382.1| DNA ligase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320499|gb|ADK69142.1| DNA ligase (NAD(+)) [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 668 Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK +A++ + L + K YY D+P D YD + L +L+ +PEL D P Sbjct: 1 MSKDKALLRINQLKEQLNLWSKQYYVDDNPSVDDTEYDLALKELISLETLYPELITSDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQKVG 65 >gi|33241290|ref|NP_876232.1| NAD-dependent DNA ligase LigA [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|81663882|sp|Q7V9J2|DNLJ_PROMA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|33238820|gb|AAQ00885.1| NAD-dependent DNA ligase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 685 Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ + L + YY LD PL D ++DR+ L L++Q+P L D P Sbjct: 1 MAETNHSKRISELRSLLNKANHAYYILDSPLIEDAVFDRLYRELIELEKQYPSLVTPDSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 SQRLG 65 >gi|300779557|ref|ZP_07089415.1| NAD-dependent DNA ligase LigA [Chryseobacterium gleum ATCC 35910] gi|300505067|gb|EFK36207.1| NAD-dependent DNA ligase LigA [Chryseobacterium gleum ATCC 35910] Length = 667 Score = 87.6 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 33/62 (53%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++E L K H + YY+LD P TD +D + + L L+ ++PE +DE+ P Sbjct: 3 ENIQQKIEQLRKELHQHNENYYQLDTPTITDFEFDMLLQELQDLEARYPEFYDENSPTVR 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|166216285|sp|Q03JF6|DNLJ_STRTD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 652 Score = 87.6 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV + K YY D+P +D YD++ L L+ + PEL D P + VG Sbjct: 2 EKRMKELVDKLNQYAKEYYTEDNPSVSDAEYDKLYRELVTLEAEHPELVQADSPTHRVG 60 >gi|157964864|ref|YP_001499688.1| NAD-dependent DNA ligase LigA [Rickettsia massiliae MTU5] gi|166216234|sp|A8F2K5|DNLJ_RICM5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157844640|gb|ABV85141.1| DNA ligase, NAD-dependent [Rickettsia massiliae MTU5] Length = 689 Score = 87.2 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 35/70 (50%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 + + +S+ EA +E L + YY D+PL +D YD++ L+++FP L Sbjct: 2 QNIDLISEKEAQKLLEELADKIAAYNHAYYIEDNPLVSDSEYDQLFNTNLKLEQKFPHLI 61 Query: 109 DEDHPWNTVG 118 E+ P VG Sbjct: 62 LENSPSKKVG 71 >gi|239944478|ref|ZP_04696415.1| NAD-dependent DNA ligase LigA [Streptomyces roseosporus NRRL 15998] gi|239990936|ref|ZP_04711600.1| NAD-dependent DNA ligase LigA [Streptomyces roseosporus NRRL 11379] gi|291447943|ref|ZP_06587333.1| NAD-dependent DNA ligase LigA [Streptomyces roseosporus NRRL 15998] gi|291350890|gb|EFE77794.1| NAD-dependent DNA ligase LigA [Streptomyces roseosporus NRRL 15998] Length = 743 Score = 87.2 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 28/52 (53%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 L + H+ YY D P+ +D +DR+ L+AL++++P L D P V Sbjct: 24 LAEQIEEHRFRYYVKDQPVVSDAEFDRLLRSLEALEDEYPPLRTPDSPTQQV 75 >gi|327438552|dbj|BAK14917.1| NAD-dependent DNA ligase [Solibacillus silvestris StLB046] Length = 665 Score = 87.2 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + L K+ + YY LD P+ D +YD++ L AL+E PE D P V Sbjct: 3 EIEQRIAELNKLLHEYGYAYYVLDKPVVEDSVYDQLLHELIALEEANPEFIYPDSPTQRV 62 Query: 118 G 118 G Sbjct: 63 G 63 >gi|255009394|ref|ZP_05281520.1| putative DNA ligase [Bacteroides fragilis 3_1_12] gi|313147153|ref|ZP_07809346.1| DNA ligase [Bacteroides fragilis 3_1_12] gi|313135920|gb|EFR53280.1| DNA ligase [Bacteroides fragilis 3_1_12] Length = 665 Score = 87.2 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L H YY L+ P +D +D + L L+++ PE DE+ P VG Sbjct: 3 VKEKIDQLRIQLHQHNYNYYVLNAPEISDKEFDDLMRELQTLEQEHPEYKDENSPTMRVG 62 >gi|55821530|ref|YP_139972.1| NAD-dependent DNA ligase LigA [Streptococcus thermophilus LMG 18311] gi|55823458|ref|YP_141899.1| NAD-dependent DNA ligase LigA [Streptococcus thermophilus CNRZ1066] gi|81559086|sp|Q5LYL9|DNLJ_STRT1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|81560280|sp|Q5M382|DNLJ_STRT2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|55737515|gb|AAV61157.1| DNA ligase [Streptococcus thermophilus LMG 18311] gi|55739443|gb|AAV63084.1| DNA ligase [Streptococcus thermophilus CNRZ1066] Length = 652 Score = 87.2 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV + K YY D+P +D YD++ L L+ + PEL D P + VG Sbjct: 2 EKRMKELVDKLNQYAKEYYTEDNPSVSDAEYDKLYRELVTLEAEHPELVQADSPTHRVG 60 >gi|331703733|ref|YP_004400420.1| DNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802288|emb|CBW54442.1| DNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 668 Score = 87.2 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK +A++ + L + K YY D+P D YD + L +L+ +PEL D P Sbjct: 1 MSKDKALLRINQLKEQLNLWSKQYYVDDNPSVDDIEYDLALKELISLETLYPELITSDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQKVG 65 >gi|329920507|ref|ZP_08277239.1| DNA ligase (NAD+) [Lactobacillus iners SPIN 1401G] gi|328936183|gb|EGG32636.1| DNA ligase (NAD+) [Lactobacillus iners SPIN 1401G] Length = 672 Score = 87.2 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 35/67 (52%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + LS +A +EV L K YY D P+ D +YD+V ++L L++++P L D D Sbjct: 2 SELSLAQAKLEVLKLRKQLDSWAYAYYVQDAPVVEDNIYDQVYQQLLELEQKYPVLIDPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|312875390|ref|ZP_07735394.1| DNA ligase (NAD+) [Lactobacillus iners LEAF 2053A-b] gi|311089053|gb|EFQ47493.1| DNA ligase (NAD+) [Lactobacillus iners LEAF 2053A-b] Length = 672 Score = 87.2 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 35/67 (52%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + LS +A +EV L K YY D P+ D +YD+V ++L L++++P L D D Sbjct: 2 SELSLAQAKLEVLKLRKQLDSWAYAYYVQDAPVVEDNIYDQVYQQLLELEQKYPVLIDPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|309808880|ref|ZP_07702761.1| DNA ligase (NAD+) [Lactobacillus iners LactinV 01V1-a] gi|308167878|gb|EFO70015.1| DNA ligase (NAD+) [Lactobacillus iners LactinV 01V1-a] Length = 672 Score = 87.2 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 35/67 (52%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + LS +A +EV L K YY D P+ D +YD+V ++L L++++P L D D Sbjct: 2 SELSLAQAKLEVLKLRKQLDSWAYAYYVQDAPVVEDNIYDQVYQQLLELEQKYPVLIDPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|152965283|ref|YP_001361067.1| DNA ligase, NAD-dependent [Kineococcus radiotolerans SRS30216] gi|190359261|sp|A6W7L4|DNLJ_KINRD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|151359800|gb|ABS02803.1| DNA ligase, NAD-dependent [Kineococcus radiotolerans SRS30216] Length = 696 Score = 87.2 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 29/63 (46%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 EA E LV + YY + +DG YD + L AL+EQ P+L D P Sbjct: 10 PSEARHRWEDLVAQIEAARFAYYVRNSSPLSDGQYDALERELRALEEQHPQLRTPDSPTQ 69 Query: 116 TVG 118 TVG Sbjct: 70 TVG 72 >gi|325911416|ref|ZP_08173828.1| DNA ligase (NAD+) [Lactobacillus iners UPII 143-D] gi|325476766|gb|EGC79920.1| DNA ligase (NAD+) [Lactobacillus iners UPII 143-D] Length = 672 Score = 87.2 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 35/67 (52%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + LS +A +EV L K YY D P+ D +YD+V ++L L++++P L D D Sbjct: 2 SELSLAQAKLEVLKLRKQLDSWAYAYYVQDAPVVEDNIYDQVYQQLLELEQKYPVLIDPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|256383839|gb|ACU78409.1| DNA ligase, NAD-dependent [Mycoplasma mycoides subsp. capri str. GM12] gi|256384670|gb|ACU79239.1| DNA ligase, NAD-dependent [Mycoplasma mycoides subsp. capri str. GM12] gi|296455996|gb|ADH22231.1| DNA ligase, NAD-dependent [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 668 Score = 87.2 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK +A++ + L + K YY D+P D YD + L +L+ +PEL D P Sbjct: 1 MSKDKALLRINQLKEQLNLWSKQYYVDDNPSVDDIEYDLALKELISLETLYPELITSDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQKVG 65 >gi|315653834|ref|ZP_07906750.1| NAD-dependent DNA ligase LigA [Lactobacillus iners ATCC 55195] gi|315488530|gb|EFU78176.1| NAD-dependent DNA ligase LigA [Lactobacillus iners ATCC 55195] Length = 672 Score = 87.2 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 35/67 (52%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + LS +A +EV L K YY D P+ D +YD+V ++L L++++P L D D Sbjct: 2 SELSLAQAKLEVLKLRKQLDSWAYAYYVQDAPVVEDNIYDQVYQQLLELEQKYPVLIDPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|229055132|ref|ZP_04195560.1| DNA ligase [Bacillus cereus AH603] gi|228721208|gb|EEL72737.1| DNA ligase [Bacillus cereus AH603] Length = 669 Score = 87.2 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEITKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRDMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SIRVG 65 >gi|222086432|ref|YP_002544966.1| DNA ligase, NAD-dependent [Agrobacterium radiobacter K84] gi|254781247|sp|B9JH39|DNLJ_AGRRK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|221723880|gb|ACM27036.1| DNA ligase, NAD-dependent [Agrobacterium radiobacter K84] Length = 717 Score = 87.2 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 34/72 (47%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 + K V L++ EA + YL + Y+ D P +D YD + R DA++ +FP Sbjct: 4 EQKPVEDLTEEEAAAALAYLAAEIARNDALYHGNDAPEISDAEYDALKRRNDAIEARFPA 63 Query: 107 LFDEDHPWNTVG 118 L D P VG Sbjct: 64 LVRADSPSRRVG 75 >gi|257784913|ref|YP_003180130.1| DNA ligase, NAD-dependent [Atopobium parvulum DSM 20469] gi|257473420|gb|ACV51539.1| DNA ligase, NAD-dependent [Atopobium parvulum DSM 20469] Length = 705 Score = 87.2 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 +LS E L +I H YY LD+P TD +DR+ L L+ +PEL ED Sbjct: 2 AALSPKETA-RAAELNRILNHAAYAYYALDNPELTDAEFDRLLIELQQLEAAYPELITED 60 Query: 112 HPWNTVG 118 VG Sbjct: 61 SYTQRVG 67 >gi|229815888|ref|ZP_04446212.1| hypothetical protein COLINT_02944 [Collinsella intestinalis DSM 13280] gi|229808583|gb|EEP44361.1| hypothetical protein COLINT_02944 [Collinsella intestinalis DSM 13280] Length = 752 Score = 87.2 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 24/54 (44%) Query: 65 YLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + +H YY LD P TD +D++ L ++ PEL D VG Sbjct: 49 ELRHLLDYHAYRYYALDAPEITDAAFDKLLVELQQIEAAHPELVTPDSYTQRVG 102 >gi|309804542|ref|ZP_07698607.1| DNA ligase (NAD+) [Lactobacillus iners LactinV 09V1-c] gi|309809394|ref|ZP_07703256.1| DNA ligase (NAD+) [Lactobacillus iners SPIN 2503V10-D] gi|312873385|ref|ZP_07733436.1| DNA ligase (NAD+) [Lactobacillus iners LEAF 2052A-d] gi|308165934|gb|EFO68152.1| DNA ligase (NAD+) [Lactobacillus iners LactinV 09V1-c] gi|308170305|gb|EFO72336.1| DNA ligase (NAD+) [Lactobacillus iners SPIN 2503V10-D] gi|311091069|gb|EFQ49462.1| DNA ligase (NAD+) [Lactobacillus iners LEAF 2052A-d] Length = 672 Score = 87.2 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 35/67 (52%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + LS +A +EV L K YY D P+ D +YD+V ++L L++++P L D D Sbjct: 2 SELSLAQAKLEVLKLRKQLDSWAYAYYVQDAPVVEDNIYDQVYQQLLELEQKYPVLIDPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|259501108|ref|ZP_05744010.1| DNA ligase [Lactobacillus iners DSM 13335] gi|302190444|ref|ZP_07266698.1| DNA ligase [Lactobacillus iners AB-1] gi|259167802|gb|EEW52297.1| DNA ligase [Lactobacillus iners DSM 13335] Length = 672 Score = 87.2 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 35/67 (52%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + LS +A +EV L K YY D P+ D +YD+V ++L L++++P L D D Sbjct: 2 SELSLAQAKLEVLKLRKQLDSWAYAYYVQDAPVVEDNIYDQVYQQLLELEQKYPVLIDPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|295135415|ref|YP_003586091.1| DNA ligase [Zunongwangia profunda SM-A87] gi|294983430|gb|ADF53895.1| DNA ligase [Zunongwangia profunda SM-A87] Length = 812 Score = 87.2 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 30/61 (49%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++ L + HH YY LD+P +D +D + L L+E+ PE D + P V Sbjct: 2 DIENKIYTLREELQHHNYQYYVLDNPEISDYDFDMKLKELQELEEKHPEFNDPNSPTQRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|319946751|ref|ZP_08020985.1| NAD-dependent DNA ligase LigA [Streptococcus australis ATCC 700641] gi|319746799|gb|EFV99058.1| NAD-dependent DNA ligase LigA [Streptococcus australis ATCC 700641] Length = 652 Score = 87.2 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV + H+ + YY D P +D YD++ L AL+E PEL + P + VG Sbjct: 2 ETRMKELVTLLNHYAEEYYTKDAPSVSDYEYDKLYRELVALEEAHPELVQPNSPTHRVG 60 >gi|300783591|ref|YP_003763882.1| DNA ligase (NAD+) [Amycolatopsis mediterranei U32] gi|299793105|gb|ADJ43480.1| DNA ligase (NAD+) [Amycolatopsis mediterranei U32] Length = 726 Score = 87.2 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 27/63 (42%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + L + HQ YY LD P+ +DG +D + L L++ P L + P Sbjct: 27 PADVRERHSALAEELRDHQFRYYVLDSPIISDGQFDELLGELQRLEDAHPALVTPESPTQ 86 Query: 116 TVG 118 VG Sbjct: 87 RVG 89 >gi|285018504|ref|YP_003376215.1| NAD-dependent_DNA_ligase [Xanthomonas albilineans GPE PC73] gi|283473722|emb|CBA16225.1| putative nad-dependent_dna_ligase protein [Xanthomonas albilineans] Length = 838 Score = 86.8 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 24/59 (40%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V L YY L DP D YD + L+AL+ P L ED P +VG Sbjct: 8 QQRVVELRSQLEDANHRYYVLADPAIPDAEYDALMRELEALESAHPALAREDSPTRSVG 66 >gi|146318834|ref|YP_001198546.1| NAD-dependent DNA ligase LigA [Streptococcus suis 05ZYH33] gi|166216250|sp|A4VVK7|DNLJ_STRSY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145689640|gb|ABP90146.1| NAD-dependent DNA ligase (contains BRCT domain type II) [Streptococcus suis 05ZYH33] Length = 652 Score = 86.8 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + K YY+LD P +D YD + L L+ PEL D P + VG Sbjct: 2 KTRISELVSVLNQYAKEYYQLDQPSVSDAEYDTLYRELVELETAHPELILPDSPTHRVG 60 >gi|296116447|ref|ZP_06835061.1| putative DNA ligase [Gluconacetobacter hansenii ATCC 23769] gi|295977040|gb|EFG83804.1| putative DNA ligase [Gluconacetobacter hansenii ATCC 23769] Length = 709 Score = 86.8 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 +S +A E+ L + + Y++ D P+ TD +YD + R L++ P +D Sbjct: 22 PDMSASQAASELALLADVIAQLDRAYHQDDAPIVTDAVYDALRRRNSELEQAHPRERRDD 81 Query: 112 HPWNTVG 118 P VG Sbjct: 82 SPDTRVG 88 >gi|309803834|ref|ZP_07697919.1| DNA ligase (NAD+) [Lactobacillus iners LactinV 11V1-d] gi|312870780|ref|ZP_07730886.1| DNA ligase (NAD+) [Lactobacillus iners LEAF 3008A-a] gi|312873110|ref|ZP_07733169.1| DNA ligase (NAD+) [Lactobacillus iners LEAF 2062A-h1] gi|308164068|gb|EFO66330.1| DNA ligase (NAD+) [Lactobacillus iners LactinV 11V1-d] gi|311091343|gb|EFQ49728.1| DNA ligase (NAD+) [Lactobacillus iners LEAF 2062A-h1] gi|311093656|gb|EFQ51994.1| DNA ligase (NAD+) [Lactobacillus iners LEAF 3008A-a] Length = 672 Score = 86.8 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 35/67 (52%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + LS +A +EV L K YY D P+ D +YD+V ++L L++++P L D D Sbjct: 2 SELSLAQAKLEVLKLRKQLDSWAYAYYVQDAPVVEDNIYDQVYQQLLELEQKYPVLIDPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|254430924|ref|ZP_05044627.1| DNA ligase, NAD-dependent [Cyanobium sp. PCC 7001] gi|197625377|gb|EDY37936.1| DNA ligase, NAD-dependent [Cyanobium sp. PCC 7001] Length = 667 Score = 86.8 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L ++ YY LD P+ D +YDR+ L L++ PEL D P VG Sbjct: 9 RDRIAELQRLLTQAAHAYYVLDAPVMEDPVYDRLYRELLELEQAHPELIRPDSPTQRVG 67 >gi|146321044|ref|YP_001200755.1| NAD-dependent DNA ligase LigA [Streptococcus suis 98HAH33] gi|253751920|ref|YP_003025061.1| DNA ligase [Streptococcus suis SC84] gi|253753743|ref|YP_003026884.1| DNA ligase [Streptococcus suis P1/7] gi|253755379|ref|YP_003028519.1| DNA ligase [Streptococcus suis BM407] gi|166216248|sp|A4W1W6|DNLJ_STRS2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145691850|gb|ABP92355.1| NAD-dependent DNA ligase (contains BRCT domain type II) [Streptococcus suis 98HAH33] gi|251816209|emb|CAZ51836.1| DNA ligase [Streptococcus suis SC84] gi|251817843|emb|CAZ55596.1| DNA ligase [Streptococcus suis BM407] gi|251819989|emb|CAR46142.1| DNA ligase [Streptococcus suis P1/7] gi|292558495|gb|ADE31496.1| NAD-dependent DNA ligase [Streptococcus suis GZ1] gi|319758281|gb|ADV70223.1| NAD-dependent DNA ligase LigA [Streptococcus suis JS14] Length = 652 Score = 86.8 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + K YY+LD P +D YD + L L+ PEL D P + VG Sbjct: 2 KTRISELVSVLNQYAKEYYQLDQPSVSDAEYDTLYRELVELETAHPELILPDSPTHRVG 60 >gi|312888786|ref|ZP_07748349.1| DNA ligase, NAD-dependent [Mucilaginibacter paludis DSM 18603] gi|311298661|gb|EFQ75767.1| DNA ligase, NAD-dependent [Mucilaginibacter paludis DSM 18603] Length = 675 Score = 86.8 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S EA ++ L H YY L P +D +D+ E L AL++QFPE + D P Sbjct: 1 MSPTEAKNKIHTLSAELKQHNYNYYVLAMPTISDFDFDKKLEELAALEKQFPEFAEPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQQVG 65 >gi|302023934|ref|ZP_07249145.1| NAD-dependent DNA ligase LigA [Streptococcus suis 05HAS68] gi|330832985|ref|YP_004401810.1| NAD-dependent DNA ligase LigA [Streptococcus suis ST3] gi|329307208|gb|AEB81624.1| NAD-dependent DNA ligase LigA [Streptococcus suis ST3] Length = 652 Score = 86.8 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + K YY+LD P +D YD + L L+ PEL D P + VG Sbjct: 2 KTRISELVSVLNQYAKEYYQLDQPSVSDAEYDTLYRELVELETAHPELILPDSPTHRVG 60 >gi|163751929|ref|ZP_02159142.1| DNA ligase, NAD-dependent [Shewanella benthica KT99] gi|161328212|gb|EDP99377.1| DNA ligase, NAD-dependent [Shewanella benthica KT99] Length = 690 Score = 86.8 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 16/74 (21%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL------------- 107 E+E+L+ H Y+ LDDP+ TD YDR+ +L L+ +FP L Sbjct: 10 QEIEHLISEINEHDHRYHVLDDPIITDSEYDRLKIKLKKLENRFPALNLILDLNAVSEGV 69 Query: 108 ---FDEDHPWNTVG 118 D P VG Sbjct: 70 HTSIRFDSPSRRVG 83 >gi|223932796|ref|ZP_03624793.1| DNA ligase, NAD-dependent [Streptococcus suis 89/1591] gi|223898505|gb|EEF64869.1| DNA ligase, NAD-dependent [Streptococcus suis 89/1591] Length = 652 Score = 86.8 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + K YY+LD P +D YD + L L+ PEL D P + VG Sbjct: 2 KTRISELVSVLNQYAKEYYQLDQPSVSDAEYDTLYRELVELETAHPELILPDSPTHRVG 60 >gi|325295048|ref|YP_004281562.1| DNA ligase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065496|gb|ADY73503.1| DNA ligase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 723 Score = 86.8 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 LS EA E L K+ +H YY L P+ +D YD++ L+ L++ E+ D Sbjct: 31 KLSTEEAKELAEKLRKVIRYHDYKYYVLASPVISDYQYDKLFHALEDLEKVHSEIITPDS 90 Query: 113 PWNTV 117 P + Sbjct: 91 PTQRI 95 >gi|303231514|ref|ZP_07318244.1| DNA ligase (NAD+) [Veillonella atypica ACS-049-V-Sch6] gi|302513857|gb|EFL55869.1| DNA ligase (NAD+) [Veillonella atypica ACS-049-V-Sch6] Length = 666 Score = 86.8 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 24/59 (40%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L K H Q YY D+P +D YD+ L L+ PE P VG Sbjct: 4 KDRIEQLQKELTHAQYLYYVKDNPTMSDFEYDQKYRELVDLETAHPEYIVPSSPTQRVG 62 >gi|255021565|ref|ZP_05293608.1| DNA ligase [Acidithiobacillus caldus ATCC 51756] gi|254968953|gb|EET26472.1| DNA ligase [Acidithiobacillus caldus ATCC 51756] Length = 659 Score = 86.8 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 25/50 (50%) Query: 69 IALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + + YYR D P+ +D YD + L AL++ PEL D P VG Sbjct: 2 LLEAANRAYYRDDAPVMSDAEYDALLRELRALEDAHPELRVADSPTQRVG 51 >gi|237713195|ref|ZP_04543676.1| DNA ligase [Bacteroides sp. D1] gi|262406666|ref|ZP_06083215.1| DNA ligase, NAD-dependent [Bacteroides sp. 2_1_22] gi|294643460|ref|ZP_06721274.1| DNA ligase (NAD(+)) [Bacteroides ovatus SD CC 2a] gi|294808131|ref|ZP_06766900.1| DNA ligase (NAD(+)) [Bacteroides xylanisolvens SD CC 1b] gi|229446662|gb|EEO52453.1| DNA ligase [Bacteroides sp. D1] gi|262355369|gb|EEZ04460.1| DNA ligase, NAD-dependent [Bacteroides sp. 2_1_22] gi|292641208|gb|EFF59412.1| DNA ligase (NAD(+)) [Bacteroides ovatus SD CC 2a] gi|294444674|gb|EFG13372.1| DNA ligase (NAD(+)) [Bacteroides xylanisolvens SD CC 1b] Length = 666 Score = 86.8 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++E L H YY L+ P +D +D L L++ PE DE+ P V Sbjct: 2 DIKEKIEELRAELHRHNYNYYVLNAPEISDKEFDDKMRELQDLEQAHPEYKDENSPTMRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|170016835|ref|YP_001727754.1| DNA ligase, NAD-dependent [Leuconostoc citreum KM20] gi|254781358|sp|B1MXQ8|DNLJ_LEUCK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|169803692|gb|ACA82310.1| DNA ligase, NAD-dependent [Leuconostoc citreum KM20] Length = 681 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 33/74 (44%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 L + V +L+ A E+ L K + YY D PL D +YD RL L+ QF Sbjct: 2 LPEFTPVNNLTTQMAQQEIATLQKRLTDYGVAYYEEDAPLVEDYIYDAFYARLVLLEAQF 61 Query: 105 PELFDEDHPWNTVG 118 P+ D P VG Sbjct: 62 PQFVTPDSPTQNVG 75 >gi|260063119|ref|YP_003196199.1| DNA ligase [Robiginitalea biformata HTCC2501] gi|88784688|gb|EAR15858.1| DNA ligase [Robiginitalea biformata HTCC2501] Length = 673 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++K + +++ L H YY LD+P+ +D +D + L L++Q PE +D Sbjct: 3 EKVNKRDIAEKIQALRDELRDHNYRYYVLDEPVISDYDFDMKLKALQDLEKQHPEFYDPA 62 Query: 112 HPWNTVG 118 P VG Sbjct: 63 SPTQRVG 69 >gi|255691906|ref|ZP_05415581.1| DNA ligase, NAD-dependent [Bacteroides finegoldii DSM 17565] gi|260622459|gb|EEX45330.1| DNA ligase, NAD-dependent [Bacteroides finegoldii DSM 17565] Length = 666 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 26/61 (42%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + +E L H YY L+ P +D +D L L+E PE DE+ P V Sbjct: 2 DIKGRIEELRAELHRHNYNYYVLNAPEISDKEFDDKMRELQDLEEAHPEYKDENSPTMRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|300691610|ref|YP_003752605.1| DNA ligase [Ralstonia solanacearum PSI07] gi|299078670|emb|CBJ51328.1| DNA ligase [Ralstonia solanacearum PSI07] Length = 813 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 23/48 (47%) Query: 71 LHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + YY LD P D YDR+ L+AL+ PEL D P VG Sbjct: 25 NRYAHEYYVLDQPSVPDAEYDRLYRELEALEADHPELKTPDSPTLRVG 72 >gi|237717569|ref|ZP_04548050.1| DNA ligase [Bacteroides sp. 2_2_4] gi|293371586|ref|ZP_06618001.1| DNA ligase (NAD(+)) [Bacteroides ovatus SD CMC 3f] gi|229453155|gb|EEO58946.1| DNA ligase [Bacteroides sp. 2_2_4] gi|292633449|gb|EFF52017.1| DNA ligase (NAD(+)) [Bacteroides ovatus SD CMC 3f] Length = 666 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++E L H YY L+ P +D +D L L++ PE DE+ P V Sbjct: 2 DIKEKIEELRAELHRHNYNYYVLNAPEISDKEFDDKMRELQDLEQAHPEYKDENSPTMRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|299145622|ref|ZP_07038690.1| DNA ligase, NAD-dependent [Bacteroides sp. 3_1_23] gi|298516113|gb|EFI39994.1| DNA ligase, NAD-dependent [Bacteroides sp. 3_1_23] Length = 666 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++E L H YY L+ P +D +D L L++ PE DE+ P V Sbjct: 2 DIKEKIEELRAELHRHNYNYYVLNAPEISDKEFDDKMRELQDLEQAHPEYKDENSPTMRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|298484007|ref|ZP_07002176.1| DNA ligase, NAD-dependent [Bacteroides sp. D22] gi|298269788|gb|EFI11380.1| DNA ligase, NAD-dependent [Bacteroides sp. D22] Length = 666 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++E L H YY L+ P +D +D L L++ PE DE+ P V Sbjct: 2 DIKEKIEELRAELHRHNYNYYVLNAPEISDKEFDDKMRELQDLEQAHPEYKDENSPTMRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|295084199|emb|CBK65722.1| DNA ligase, NAD-dependent [Bacteroides xylanisolvens XB1A] Length = 666 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++E L H YY L+ P +D +D L L++ PE DE+ P V Sbjct: 2 DIKEKIEELRAELHRHNYNYYVLNAPEISDKEFDDKMRELQDLEQAHPEYKDENSPTMRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|160884627|ref|ZP_02065630.1| hypothetical protein BACOVA_02616 [Bacteroides ovatus ATCC 8483] gi|156110366|gb|EDO12111.1| hypothetical protein BACOVA_02616 [Bacteroides ovatus ATCC 8483] Length = 666 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++E L H YY L+ P +D +D L L++ PE DE+ P V Sbjct: 2 DIKEKIEELRAELHRHNYNYYVLNAPEISDKEFDDKMRELQDLEQAHPEYKDENSPTMRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|260175035|ref|ZP_05761447.1| DNA ligase [Bacteroides sp. D2] gi|315923266|ref|ZP_07919506.1| DNA ligase [Bacteroides sp. D2] gi|313697141|gb|EFS33976.1| DNA ligase [Bacteroides sp. D2] Length = 666 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++E L H YY L+ P +D +D L L++ PE DE+ P V Sbjct: 2 DIKEKIEELRAELHRHNYNYYVLNAPEISDKEFDDKMRELQDLEQAHPEYKDENSPTMRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|296128966|ref|YP_003636216.1| DNA ligase, NAD-dependent [Cellulomonas flavigena DSM 20109] gi|296020781|gb|ADG74017.1| DNA ligase, NAD-dependent [Cellulomonas flavigena DSM 20109] Length = 824 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 27/72 (37%), Gaps = 1/72 (1%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 A V + E L + Q YY D P +D YD L+ L+++ P Sbjct: 6 PATDVQDV-PAEVRHRWTALAEQIRADQFAYYVRDAPSSSDAAYDERMRELERLEDEHPG 64 Query: 107 LFDEDHPWNTVG 118 L D P VG Sbjct: 65 LRTPDSPTQQVG 76 >gi|194335632|ref|YP_002017426.1| DNA ligase, NAD-dependent [Pelodictyon phaeoclathratiforme BU-1] gi|254781384|sp|B4SCX5|DNLJ_PELPB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|194308109|gb|ACF42809.1| DNA ligase, NAD-dependent [Pelodictyon phaeoclathratiforme BU-1] Length = 674 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L + H YY P +D +D++ ++L L+ QFP+L D P VG Sbjct: 7 AAEAIAQLRREIERHTHLYYVEAKPELSDFEFDQLLDQLITLERQFPQLLTPDSPSQRVG 66 >gi|295426520|ref|ZP_06819170.1| NAD-dependent DNA ligase LigA [Lactobacillus amylolyticus DSM 11664] gi|295063888|gb|EFG54846.1| NAD-dependent DNA ligase LigA [Lactobacillus amylolyticus DSM 11664] Length = 669 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 30/67 (44%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ +A EV L K + YY D P D +YD+ RL L++ FPEL D Sbjct: 2 ADITLDQAKTEVAALRKQLDEWAEAYYSKDAPEVEDNVYDQKYNRLLELEKDFPELVTPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|116628243|ref|YP_820862.1| NAD-dependent DNA ligase LigA [Streptococcus thermophilus LMD-9] gi|116101520|gb|ABJ66666.1| NAD-dependent DNA ligase [Streptococcus thermophilus LMD-9] Length = 648 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 29/56 (51%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV + K YY D+P +D YD++ L L+ + PEL D P + VG Sbjct: 1 MKELVDKLNQYAKEYYTEDNPSVSDAEYDKLYRELVTLEAEHPELVQADSPTHRVG 56 >gi|312278868|gb|ADQ63525.1| DNA ligase [Streptococcus thermophilus ND03] Length = 648 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 29/56 (51%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV + K YY D+P +D YD++ L L+ + PEL D P + VG Sbjct: 1 MKELVDKLNQYAKEYYTEDNPSVSDAEYDKLYRELVTLEAEHPELVQADSPTHRVG 56 >gi|312194886|ref|YP_004014947.1| DNA ligase, NAD-dependent [Frankia sp. EuI1c] gi|311226222|gb|ADP79077.1| DNA ligase, NAD-dependent [Frankia sp. EuI1c] Length = 755 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 22/48 (45%) Query: 70 ALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 H YY L P +D YD + L AL+E++P L D P V Sbjct: 44 LDEHAYRYYVLAAPTVSDAEYDVLYRELVALEERYPALRTPDSPTQKV 91 >gi|153956079|ref|YP_001396844.1| LigA1 [Clostridium kluyveri DSM 555] gi|219856414|ref|YP_002473536.1| hypothetical protein CKR_3071 [Clostridium kluyveri NBRC 12016] gi|190359246|sp|A5N2X7|DNLJ_CLOK5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781297|sp|B9DWM9|DNLJ_CLOK1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|146348937|gb|EDK35473.1| LigA1 [Clostridium kluyveri DSM 555] gi|219570138|dbj|BAH08122.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 663 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 28/61 (45%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++ L KI +H YY DDP TD YD++ L L+ PE + P V Sbjct: 2 DIKKRIDELRKIIEYHNDKYYNQDDPEITDYEYDKLYVELRNLENSHPEYKIQSSPTQKV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|320529157|ref|ZP_08030249.1| DNA ligase, NAD-dependent [Selenomonas artemidis F0399] gi|320138787|gb|EFW30677.1| DNA ligase, NAD-dependent [Selenomonas artemidis F0399] Length = 672 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 54 LSKGEA-MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +S +A E+ L + + K YY + +D +D++ RL A++ ++PEL ++ Sbjct: 1 MSDIQAVKAELAELRRQIRRYSKQYYDDNASDISDYEFDQLMLRLKAIEAEYPELITKNS 60 Query: 113 PWNTVG 118 P VG Sbjct: 61 PTQKVG 66 >gi|326797492|ref|YP_004315311.1| DNA ligase [Sphingobacterium sp. 21] gi|326548256|gb|ADZ76641.1| DNA ligase [Sphingobacterium sp. 21] Length = 672 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A+ +E L K H YY L P +D +D+ L AL++ +PE D D P Sbjct: 1 MQRNDALSRIEALTKELNDHNYKYYVLAQPSISDFDFDQKLAELAALEKDYPEFLDPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQKVG 65 >gi|86605509|ref|YP_474272.1| DNA ligase, NAD-dependent [Synechococcus sp. JA-3-3Ab] gi|123765626|sp|Q2JW63|DNLJ_SYNJA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|86554051|gb|ABC99009.1| DNA ligase, NAD-dependent [Synechococcus sp. JA-3-3Ab] Length = 673 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 24/59 (40%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + YY D P+ D +YDR+ L L+ +PEL D P VG Sbjct: 6 EQRARELRALLQKASIAYYVHDAPILEDSVYDRLYRELQELERAYPELITPDSPTQRVG 64 >gi|269798060|ref|YP_003311960.1| DNA ligase, NAD-dependent [Veillonella parvula DSM 2008] gi|269094689|gb|ACZ24680.1| DNA ligase, NAD-dependent [Veillonella parvula DSM 2008] Length = 667 Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 23/59 (38%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + H Q YY D P +D YD+ L L+ PE P VG Sbjct: 4 KDRIKELQQELTHAQYLYYVKDAPTMSDFEYDKKYRELVDLETAHPEYIVPSSPTQRVG 62 >gi|227892258|ref|ZP_04010063.1| NAD-dependent DNA ligase [Lactobacillus salivarius ATCC 11741] gi|227865899|gb|EEJ73320.1| NAD-dependent DNA ligase [Lactobacillus salivarius ATCC 11741] Length = 672 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S+ + +E++ L YY LD P D +YD+ +RL L++ P+L D P Sbjct: 1 MSQKDIEMELKELRDKLNRWSNEYYVLDTPSVEDSVYDKHYQRLLELEQANPDLVTADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|116493340|ref|YP_805075.1| NAD-dependent DNA ligase [Pediococcus pentosaceus ATCC 25745] gi|122265196|sp|Q03DT9|DNLJ_PEDPA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116103490|gb|ABJ68633.1| NAD-dependent DNA ligase [Pediococcus pentosaceus ATCC 25745] Length = 675 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 32/74 (43%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + KK+ + EA + L +I K YY D P D YD L AL+E F Sbjct: 1 MSLPKKLEEMQVEEASKLAQNLREILDRWSKLYYTKDAPEVEDYEYDEKYADLVALEEAF 60 Query: 105 PELFDEDHPWNTVG 118 PE+ +D VG Sbjct: 61 PEIITQDSITQRVG 74 >gi|186680717|ref|YP_001863913.1| NAD-dependent DNA ligase LigA [Nostoc punctiforme PCC 73102] gi|254781381|sp|B2J3P0|DNLJ_NOSP7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|186463169|gb|ACC78970.1| DNA ligase, NAD-dependent [Nostoc punctiforme PCC 73102] Length = 678 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 K E E L ++ YY LD P+ D +YD++ L L+ Q+PEL D P Sbjct: 5 KPEVK-RTEELRQLLQQASYAYYVLDTPIMEDSVYDQLYRELQQLEIQYPELTAPDSPTQ 63 Query: 116 TVG 118 VG Sbjct: 64 RVG 66 >gi|288801242|ref|ZP_06406697.1| DNA ligase, NAD-dependent [Prevotella sp. oral taxon 299 str. F0039] gi|288331853|gb|EFC70336.1| DNA ligase, NAD-dependent [Prevotella sp. oral taxon 299 str. F0039] Length = 666 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + + L K H YY L+ P D +D + L +L+ PE++D + P Sbjct: 1 MTTEQ--ERIIELRKELHQHNYNYYVLNAPQIDDFTFDALLHELQSLENAHPEMYDANSP 58 Query: 114 WNTVG 118 VG Sbjct: 59 TQRVG 63 >gi|325267489|ref|ZP_08134142.1| NAD-dependent DNA ligase LigA [Kingella denitrificans ATCC 33394] gi|324981014|gb|EGC16673.1| NAD-dependent DNA ligase LigA [Kingella denitrificans ATCC 33394] Length = 804 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 27/57 (47%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV+ + YY LD P D YDR+ L+ L+ ++P+ + P VG Sbjct: 31 RIRTLVQTLNRYAHEYYTLDAPSVPDAEYDRLYRELETLEAEYPQFRLPESPTQRVG 87 >gi|54293931|ref|YP_126346.1| DNA ligase [Legionella pneumophila str. Lens] gi|81368949|sp|Q5WXV3|DNLJ_LEGPL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|53753763|emb|CAH15221.1| DNA ligase [Legionella pneumophila str. Lens] Length = 673 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ +E L + + YY LD+PL D YDR + L +EQ+P+ D P Sbjct: 1 MNDQGIKESIETLKEQIRKYDYHYYVLDEPLVPDAEYDRCFKALQQYEEQYPQFLSPDSP 60 Query: 114 WNTV 117 V Sbjct: 61 TQRV 64 >gi|307609752|emb|CBW99264.1| DNA ligase [Legionella pneumophila 130b] Length = 650 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ +E L + + YY LD+PL D YDR + L +EQ+P+ D P Sbjct: 1 MNDQGIKESIETLKEQIRKYDYHYYVLDEPLVPDAEYDRCFKALQQYEEQYPQFLSPDSP 60 Query: 114 WNTV 117 V Sbjct: 61 TQRV 64 >gi|300214970|gb|ADJ79386.1| DNA ligase(Polydeoxyribonucleotide synthase [NAD+]) [Lactobacillus salivarius CECT 5713] Length = 672 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S+ + +E++ L YY LD P D +YD+ +RL L++ P+L D P Sbjct: 1 MSQKDIEMELKELRDKLNRWSNEYYVLDTPSVEDSVYDKHYQRLLELEQANPDLVTADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|52841193|ref|YP_094992.1| DNA ligase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628304|gb|AAU27045.1| DNA ligase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 683 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ +E L + + YY LD+PL D YDR + L +EQ+P+ D P Sbjct: 11 MNDQGIKESIETLKEQIRKYDYHYYVLDEPLVPDAEYDRCFKALQQYEEQYPQFLSPDSP 70 Query: 114 WNTV 117 V Sbjct: 71 TQRV 74 >gi|126649600|ref|ZP_01721841.1| NAD-dependent DNA ligase LigA [Bacillus sp. B14905] gi|126593925|gb|EAZ87848.1| NAD-dependent DNA ligase LigA [Bacillus sp. B14905] Length = 667 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + L K+ + YY LD P+ D +YD++ L AL+E P L D P V Sbjct: 3 EIEQRIAELNKLLHEYGYAYYVLDKPVVADSVYDQLLHELIALEEANPSLIFPDSPTQRV 62 Query: 118 G 118 G Sbjct: 63 G 63 >gi|81429164|ref|YP_396165.1| NAD-dependent DNA ligase [Lactobacillus sakei subsp. sakei 23K] gi|123755813|sp|Q38VC5|DNLJ_LACSS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|78610807|emb|CAI55858.1| NAD-dependent DNA ligase [Lactobacillus sakei subsp. sakei 23K] Length = 677 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 32/71 (45%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 AK V ++ EA + L + + YY D PL D +YD + L+ L+ FP + Sbjct: 4 AKLVEDYTQSEAASLAQQLRDQLADYSQAYYTQDAPLVEDHVYDELYRDLEQLEAAFPVI 63 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 64 VTNDSPTQKVG 74 >gi|312865342|ref|ZP_07725570.1| DNA ligase (NAD+) [Streptococcus downei F0415] gi|311099453|gb|EFQ57669.1| DNA ligase (NAD+) [Streptococcus downei F0415] Length = 673 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV + K YY D+P +D YD++ L L++ PEL D P + VG Sbjct: 23 ENRMKELVDQLNRYAKEYYTQDNPSVSDAQYDKLYRELVDLEKAHPELVQADSPTHRVG 81 >gi|228476991|ref|ZP_04061629.1| DNA ligase, NAD-dependent [Streptococcus salivarius SK126] gi|228251010|gb|EEK10181.1| DNA ligase, NAD-dependent [Streptococcus salivarius SK126] Length = 652 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV + K YY D+P +D YD++ L AL+ ++PE D P + VG Sbjct: 2 EKRMKELVVKLNQYAKEYYTEDNPSVSDAEYDKLYRELVALEAEYPEYVQADSPTHRVG 60 >gi|166215832|sp|Q5ZWX6|DNLJ_LEGPH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 673 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ +E L + + YY LD+PL D YDR + L +EQ+P+ D P Sbjct: 1 MNDQGIKESIETLKEQIRKYDYHYYVLDEPLVPDAEYDRCFKALQQYEEQYPQFLSPDSP 60 Query: 114 WNTV 117 V Sbjct: 61 TQRV 64 >gi|329848744|ref|ZP_08263772.1| DNA ligase, NAD-dependent [Asticcacaulis biprosthecum C19] gi|328843807|gb|EGF93376.1| DNA ligase, NAD-dependent [Asticcacaulis biprosthecum C19] Length = 714 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ +A L +H+ YYR + P TD YD + ++L L+ QFP+L + P Sbjct: 1 MTLDDARALHSELAAQVQYHRGLYYREETPELTDADYDALEKQLRDLEAQFPDLKTSESP 60 Query: 114 WNTVG 118 TVG Sbjct: 61 TQTVG 65 >gi|260904918|ref|ZP_05913240.1| DNA ligase, NAD-dependent [Brevibacterium linens BL2] Length = 729 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Query: 49 KKVTSLSKGEAMIE-VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + LS A + LV+ + YY+ D PL D YD + RL+ L+E+FPEL Sbjct: 11 SDTSDLSDATARAQAHADLVEKIEEQRAAYYKDDSPLVADAEYDDLVHRLEDLEEKFPEL 70 Query: 108 FDEDHPWNTVG 118 + P TVG Sbjct: 71 VTDSSPTQTVG 81 >gi|313665597|ref|YP_004047468.1| DNA ligase (NAD(+)) [Mycoplasma leachii PG50] gi|312949194|gb|ADR23790.1| DNA ligase (NAD(+)) [Mycoplasma leachii PG50] Length = 668 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK + ++ + L + K YY D+P D YD + L +L+ +PE D P Sbjct: 1 MSKEQVLLRINQLKEQLNLWSKQYYVDDNPSVDDTEYDLALKELISLENLYPEFITSDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQKVG 65 >gi|296106543|ref|YP_003618243.1| DNA ligase (NAD ) [Legionella pneumophila 2300/99 Alcoy] gi|295648444|gb|ADG24291.1| DNA ligase (NAD ) [Legionella pneumophila 2300/99 Alcoy] Length = 673 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ +E L + + YY LD+PL D YDR + L +EQ+P+ D P Sbjct: 1 MNDQGIKESIETLKEQIRKYDYHYYVLDEPLVPDAEYDRCFKALQQYEEQYPQFLSPDSP 60 Query: 114 WNTV 117 V Sbjct: 61 TQRV 64 >gi|282850287|ref|ZP_06259666.1| DNA ligase (NAD(+)) [Veillonella parvula ATCC 17745] gi|282579780|gb|EFB85184.1| DNA ligase (NAD(+)) [Veillonella parvula ATCC 17745] Length = 667 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 23/59 (38%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + H Q YY D P +D YD+ L L+ PE P VG Sbjct: 4 KDRIKELQQELTHAQYLYYVKDAPTMSDFEYDKKYRELVDLETAHPEYIVPSSPTQRVG 62 >gi|325913348|ref|ZP_08175716.1| DNA ligase (NAD+) [Lactobacillus iners UPII 60-B] gi|325477451|gb|EGC80595.1| DNA ligase (NAD+) [Lactobacillus iners UPII 60-B] Length = 672 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 35/67 (52%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + LS +A +EV L K YY D P+ D +YD+V ++L L++++P L D D Sbjct: 2 SELSLAQAKLEVLKLRKQLDSWAYAYYVQDAPVVEDNIYDQVYQQLLELEQKYPVLLDPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|294791934|ref|ZP_06757082.1| DNA ligase, NAD-dependent [Veillonella sp. 6_1_27] gi|294457164|gb|EFG25526.1| DNA ligase, NAD-dependent [Veillonella sp. 6_1_27] Length = 667 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 23/59 (38%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + H Q YY D P +D YD+ L L+ PE P VG Sbjct: 4 KDRIKELQQELTHAQYLYYVKDAPTMSDFEYDKKYRELVDLETAHPEYIVPSSPTQRVG 62 >gi|262199205|ref|YP_003270414.1| DNA ligase, NAD-dependent [Haliangium ochraceum DSM 14365] gi|262082552|gb|ACY18521.1| DNA ligase, NAD-dependent [Haliangium ochraceum DSM 14365] Length = 751 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S A E LV H + YY +P+ +D YD++ ++L A++E+ P E P Sbjct: 1 MSDDTARAEYLGLVDELSDHDRRYYVEAEPIISDVEYDKLLKKLRAIEEEHPAWVVEWSP 60 Query: 114 WNTVGY 119 VG+ Sbjct: 61 TQRVGH 66 >gi|301299742|ref|ZP_07205992.1| DNA ligase (NAD(+)) [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852673|gb|EFK80307.1| DNA ligase (NAD(+)) [Lactobacillus salivarius ACS-116-V-Col5a] Length = 672 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S+ + +E++ L YY LD P D +YD+ +RL L++ P+L D P Sbjct: 1 MSQKDIEMELKELRDKLNRWSNEYYVLDTPSVEDSVYDKHYQRLLELEQANPDLVTADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|169825829|ref|YP_001695987.1| DNA ligase [Lysinibacillus sphaericus C3-41] gi|254781361|sp|B1HTW6|DNLJ_LYSSC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|168990317|gb|ACA37857.1| DNA ligase [Lysinibacillus sphaericus C3-41] Length = 667 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + L K+ + YY LD P+ D +YD++ L AL+E P L D P V Sbjct: 3 EIEQRIAELNKLLHEYGYAYYVLDKPVVADSVYDQLLHELIALEEANPSLIFPDSPTQRV 62 Query: 118 G 118 G Sbjct: 63 G 63 >gi|90962320|ref|YP_536236.1| NAD-dependent DNA ligase [Lactobacillus salivarius UCC118] gi|123391334|sp|Q1WSH6|DNLJ_LACS1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|90821514|gb|ABE00153.1| NAD-dependent DNA ligase [Lactobacillus salivarius UCC118] Length = 672 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S+ + +E++ L YY LD P D +YD+ +RL L++ P+L D P Sbjct: 1 MSQKDIEMELKELRNKLNRWSNEYYVLDTPSVEDSVYDKHYQRLLELEQANPDLVTADSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|148360390|ref|YP_001251597.1| DNA ligase [Legionella pneumophila str. Corby] gi|166215817|sp|A5IFV1|DNLJ_LEGPC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|148282163|gb|ABQ56251.1| DNA ligase [Legionella pneumophila str. Corby] Length = 673 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ +E L + + YY LD+PL D YDR + L +EQ+P+ D P Sbjct: 1 MNDQGIKESIETLKEQIRKYDYHYYVLDEPLVPDAEYDRCFKALQQYEEQYPQFLSPDSP 60 Query: 114 WNTV 117 V Sbjct: 61 TQRV 64 >gi|86608809|ref|YP_477571.1| DNA ligase, NAD-dependent [Synechococcus sp. JA-2-3B'a(2-13)] gi|123724461|sp|Q2JLU3|DNLJ_SYNJB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|86557351|gb|ABD02308.1| DNA ligase, NAD-dependent [Synechococcus sp. JA-2-3B'a(2-13)] Length = 686 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 24/59 (40%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + YY D P+ D +YDR+ L L+ +PEL D P VG Sbjct: 6 EERARELRTLLQKASIAYYVHDAPILEDSVYDRLYRELQELERAYPELVTPDSPTQRVG 64 >gi|303228999|ref|ZP_07315809.1| DNA ligase (NAD+) [Veillonella atypica ACS-134-V-Col7a] gi|302516413|gb|EFL58345.1| DNA ligase (NAD+) [Veillonella atypica ACS-134-V-Col7a] Length = 666 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 24/59 (40%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L K H Q YY D+P +D YD+ L L+ PE P VG Sbjct: 4 KDRIEQLQKELTHAQYLYYVKDNPTMSDFEYDQKYRELVDLETSHPEYIVPSSPTQRVG 62 >gi|303232470|ref|ZP_07319159.1| DNA ligase (NAD+) [Atopobium vaginae PB189-T1-4] gi|302481435|gb|EFL44506.1| DNA ligase (NAD+) [Atopobium vaginae PB189-T1-4] Length = 836 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 2/87 (2%) Query: 32 AKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYD 91 A+ PN L+ + + + A + V L ++ +H YY LDDPL +D +D Sbjct: 71 AQLQPNMPELD--VSQQEPPVDTHATVAALRVPELRRLLTYHAWRYYALDDPLISDAQFD 128 Query: 92 RVSERLDALQEQFPELFDEDHPWNTVG 118 + L AL++ PEL VG Sbjct: 129 AYLQELIALEQAHPELASPTSYTQRVG 155 >gi|83319601|ref|YP_424672.1| DNA ligase, NAD-dependent [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|123740036|sp|Q2SRE1|DNLJ_MYCCT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|83283487|gb|ABC01419.1| DNA ligase, NAD-dependent [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 668 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK + ++ + L + K YY D+P D YD + L +L+ +PE D P Sbjct: 1 MSKEQILLRINQLKEQLNLWSKQYYVDDNPSVDDTEYDLALKELISLENLYPEFITSDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQKVG 65 >gi|313893283|ref|ZP_07826858.1| DNA ligase (NAD+) [Veillonella sp. oral taxon 158 str. F0412] gi|313442179|gb|EFR60596.1| DNA ligase (NAD+) [Veillonella sp. oral taxon 158 str. F0412] Length = 667 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 23/59 (38%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + H Q YY D P +D YD+ L L+ PE P VG Sbjct: 4 KDRIKELQQELTHAQYLYYVKDAPTMSDFEYDKKYRELVDLETAHPEYIVPSSPTQRVG 62 >gi|54296979|ref|YP_123348.1| DNA ligase [Legionella pneumophila str. Paris] gi|81370862|sp|Q5X6E6|DNLJ_LEGPA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|53750764|emb|CAH12171.1| DNA ligase [Legionella pneumophila str. Paris] Length = 673 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ +E L + + YY LD+PL D YDR + L +EQ+P+ D P Sbjct: 1 MNDQGIKESIETLKEQIRKYDYHYYVLDEPLVPDAEYDRCFKALQQYEEQYPQFLSPDSP 60 Query: 114 WNTV 117 V Sbjct: 61 TQRV 64 >gi|238019226|ref|ZP_04599652.1| hypothetical protein VEIDISOL_01090 [Veillonella dispar ATCC 17748] gi|237863925|gb|EEP65215.1| hypothetical protein VEIDISOL_01090 [Veillonella dispar ATCC 17748] Length = 667 Score = 86.1 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 23/59 (38%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + H Q YY D P +D YD+ L L+ PE P VG Sbjct: 4 KDRIKELQQELTHAQYLYYVKDAPTMSDFEYDKKYRELVDLETAHPEYIVPSSPTQRVG 62 >gi|299535244|ref|ZP_07048568.1| DNA ligase [Lysinibacillus fusiformis ZC1] gi|298729365|gb|EFI69916.1| DNA ligase [Lysinibacillus fusiformis ZC1] Length = 667 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 30/61 (49%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + L K+ + YY LD P+ D +YD++ + L AL+E P L D P V Sbjct: 3 EIEQRIAELNKLLHEYGYAYYVLDKPVVADSVYDQLLQELIALEEANPSLIYPDSPTQRV 62 Query: 118 G 118 G Sbjct: 63 G 63 >gi|169335238|ref|ZP_02862431.1| hypothetical protein ANASTE_01646 [Anaerofustis stercorihominis DSM 17244] gi|169257976|gb|EDS71942.1| hypothetical protein ANASTE_01646 [Anaerofustis stercorihominis DSM 17244] Length = 659 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 33/62 (53%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+E L + L H + YY D+P +D YD + +L L+E++P+ E P + Sbjct: 2 EDIKKEIEKLTEELLEHNRKYYEEDNPSISDYDYDMLIRKLTKLEEEYPQYKKEYSPTDR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|22298400|ref|NP_681647.1| NAD-dependent DNA ligase LigA [Thermosynechococcus elongatus BP-1] gi|81743454|sp|Q8DKK2|DNLJ_THEEB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|22294579|dbj|BAC08409.1| DNA ligase [Thermosynechococcus elongatus BP-1] Length = 689 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 K ++ L ++ YY LD P+ D +YD++ L L+ +PE D P Sbjct: 4 KEPPAERIQQLRRLLQRASYAYYALDQPIMEDEVYDQLYRELQELEAAYPEYITPDSPTQ 63 Query: 116 TVG 118 +G Sbjct: 64 RIG 66 >gi|284992468|ref|YP_003411022.1| DNA ligase, NAD-dependent [Geodermatophilus obscurus DSM 43160] gi|284065713|gb|ADB76651.1| DNA ligase, NAD-dependent [Geodermatophilus obscurus DSM 43160] Length = 716 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 2/68 (2%) Query: 52 TSLSK--GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 L++ +A L + + YY D PL +DG YD + L +++ P L Sbjct: 19 EDLTEVPDDARTRHRDLSEELDRYAFAYYVQDAPLVSDGQYDELMGELKSIEAAHPALVT 78 Query: 110 EDHPWNTV 117 D P V Sbjct: 79 PDSPSQKV 86 >gi|213421996|ref|ZP_03355062.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 271 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 21/42 (50%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ +D P D YDR+ L L+ Q P+L D P VG Sbjct: 2 YHVMDAPEILDAEYDRLMRELRELEAQRPDLITPDSPTQRVG 43 >gi|329959979|ref|ZP_08298475.1| DNA ligase [Bacteroides fluxus YIT 12057] gi|328533113|gb|EGF59882.1| DNA ligase [Bacteroides fluxus YIT 12057] Length = 665 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A +++ L H YY L+ P +D +D L L+++ PE DE+ P VG Sbjct: 3 AKEKIDRLRAELHQHNYNYYVLNAPEISDKEFDDKMHELQNLEKEHPEYQDENSPTMRVG 62 >gi|157826142|ref|YP_001493862.1| NAD-dependent DNA ligase LigA [Rickettsia akari str. Hartford] gi|166216231|sp|A8GPM9|DNLJ_RICAH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157800100|gb|ABV75354.1| DNA ligase [Rickettsia akari str. Hartford] Length = 689 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 35/70 (50%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 + + +S+ EA +E L + YY D+PL +D YD++ L++QFP L Sbjct: 2 QNIDFISEAEAKKLLEELSCKIAAYNHAYYIEDNPLVSDAEYDQLVNINLKLEQQFPHLV 61 Query: 109 DEDHPWNTVG 118 E+ P VG Sbjct: 62 LENSPSKEVG 71 >gi|139438245|ref|ZP_01771798.1| Hypothetical protein COLAER_00787 [Collinsella aerofaciens ATCC 25986] gi|133776442|gb|EBA40262.1| Hypothetical protein COLAER_00787 [Collinsella aerofaciens ATCC 25986] Length = 742 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 24/54 (44%) Query: 65 YLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L +H YY LD P TD +D++ L ++ +P+L D VG Sbjct: 39 ELRHELDYHAYRYYMLDAPEITDAAFDKMLVELQEIEAAYPDLVTPDSYTQRVG 92 >gi|312984361|ref|ZP_07791702.1| DNA ligase, NAD-dependent [Lactobacillus crispatus CTV-05] gi|310894255|gb|EFQ43336.1| DNA ligase, NAD-dependent [Lactobacillus crispatus CTV-05] Length = 666 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ EA E L K + YY D P D +YD+ RL L+++FPE+ D Sbjct: 2 LTLDEAKKEAASLRKQLNEWAEAYYSKDAPEVEDNVYDQSYNRLLELEKEFPEIVTPDSI 61 Query: 114 WNTVG 118 VG Sbjct: 62 TQRVG 66 >gi|292670878|ref|ZP_06604304.1| DNA ligase [Selenomonas noxia ATCC 43541] gi|292647499|gb|EFF65471.1| DNA ligase [Selenomonas noxia ATCC 43541] Length = 673 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 31/64 (48%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 E E+ L K + K YY + +D +D + +RL A++ ++PEL ++ P Sbjct: 3 DIKEIKNELTELRKKIRKYSKQYYDENASDISDYDFDLLMQRLKAIEAEYPELITKNSPT 62 Query: 115 NTVG 118 VG Sbjct: 63 QKVG 66 >gi|110669547|ref|YP_659358.1| NAD-dependent DNA ligase LigA [Haloquadratum walsbyi DSM 16790] gi|109627294|emb|CAJ53784.1| DNA ligase (NAD) [Haloquadratum walsbyi DSM 16790] Length = 770 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 1/83 (1%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN L + + + LS+ A+ + L + H YY P+ D YD + + Sbjct: 85 PNNPYLSNIDGDFRPIEQLSEEAAVEQATQLREAIREHDYQYYIRASPIIADRAYDILFD 144 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 RL AL++ F L E P VG Sbjct: 145 RLQALEDIF-NLDTEASPTRRVG 166 >gi|224025865|ref|ZP_03644231.1| hypothetical protein BACCOPRO_02607 [Bacteroides coprophilus DSM 18228] gi|224019101|gb|EEF77099.1| hypothetical protein BACCOPRO_02607 [Bacteroides coprophilus DSM 18228] Length = 665 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ E ++ L + H YY L+ P+ +D +D++ L L+ + PE FD P Sbjct: 1 MTETE---RIDQLREELHRHNHNYYILNAPVISDQEFDKLMRELQDLEARHPEHFDPTSP 57 Query: 114 WNTVG 118 VG Sbjct: 58 SMRVG 62 >gi|320546461|ref|ZP_08040776.1| NAD-dependent DNA ligase LigA [Streptococcus equinus ATCC 9812] gi|320448846|gb|EFW89574.1| NAD-dependent DNA ligase LigA [Streptococcus equinus ATCC 9812] Length = 652 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV ++K YY D P +D YD++ L L++ PEL + P VG Sbjct: 2 KKRIQELVDELNQYRKEYYTEDQPTVSDSEYDKLYRELVELEKAHPELILPNSPTQEVG 60 >gi|288904984|ref|YP_003430206.1| DNA ligase (NAD-dependent) [Streptococcus gallolyticus UCN34] gi|288731710|emb|CBI13271.1| DNA ligase (NAD-dependent) [Streptococcus gallolyticus UCN34] Length = 652 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV ++K YY D P +D YD++ L L++ PEL + P VG Sbjct: 2 KKRIQELVDELNQYRKEYYTEDQPTVSDSEYDKLYRELVELEKAHPELILPNSPTQEVG 60 >gi|207723346|ref|YP_002253745.1| dna ligase (polydeoxyribonucleotide synthase [nad+]) (partial sequence n terminus) protein [Ralstonia solanacearum MolK2] gi|206588545|emb|CAQ35508.1| probable dna ligase (polydeoxyribonucleotide synthase [nad+]) (partial sequence n terminus) protein [Ralstonia solanacearum MolK2] Length = 568 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 24/48 (50%) Query: 71 LHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + YY LD P D YDR+ L+AL+ + PEL D P VG Sbjct: 25 NRYAHEYYVLDQPSVPDAEYDRLYRALEALEAEHPELRTPDSPTLRVG 72 >gi|313896259|ref|ZP_07829812.1| DNA ligase (NAD+) [Selenomonas sp. oral taxon 137 str. F0430] gi|312975058|gb|EFR40520.1| DNA ligase (NAD+) [Selenomonas sp. oral taxon 137 str. F0430] Length = 672 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L + + K YY + +D +D++ RL A++ ++PEL ++ P VG Sbjct: 7 VKAELAELRRQIRRYSKQYYDDNASDISDYEFDQLMLRLKAIEAEYPELITKNSPTQKVG 66 >gi|83748812|ref|ZP_00945825.1| NAD-dependent DNA ligase [Ralstonia solanacearum UW551] gi|207743250|ref|YP_002259642.1| dna ligase (polydeoxyribonucleotide synthase [nad+]) protein [Ralstonia solanacearum IPO1609] gi|83724504|gb|EAP71669.1| NAD-dependent DNA ligase [Ralstonia solanacearum UW551] gi|206594647|emb|CAQ61574.1| dna ligase (polydeoxyribonucleotide synthase [nad+]) protein [Ralstonia solanacearum IPO1609] Length = 813 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 24/48 (50%) Query: 71 LHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + YY LD P D YDR+ L+AL+ + PEL D P VG Sbjct: 25 NRYAHEYYVLDQPSVPDAEYDRLYRALEALEAEHPELRTPDSPTLRVG 72 >gi|315606212|ref|ZP_07881239.1| DNA ligase [Actinomyces sp. oral taxon 180 str. F0310] gi|315312100|gb|EFU60190.1| DNA ligase [Actinomyces sp. oral taxon 180 str. F0310] Length = 777 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 33/69 (47%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 ++ + + LV+ + YY D P +D YDR+ L+ ++E++P+L Sbjct: 3 PMSDPTFETTRKRYDELVRSIEEARAAYYDRDSPTISDADYDRMYRELEEIEERYPQLRG 62 Query: 110 EDHPWNTVG 118 D P +VG Sbjct: 63 ADSPTMSVG 71 >gi|325977951|ref|YP_004287667.1| NAD-dependent DNA ligase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177879|emb|CBZ47923.1| NAD-dependent DNA ligase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 652 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV ++K YY D P +D YD++ L L++ PEL + P VG Sbjct: 2 KKRIQELVDELNQYRKEYYTEDQPTVSDSEYDKLYRELVELEKAHPELILPNSPTQEVG 60 >gi|306833158|ref|ZP_07466288.1| NAD-dependent DNA ligase LigA [Streptococcus bovis ATCC 700338] gi|304424732|gb|EFM27868.1| NAD-dependent DNA ligase LigA [Streptococcus bovis ATCC 700338] Length = 652 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV ++K YY D P +D YD++ L L++ PEL + P VG Sbjct: 2 KKRIQELVDELNQYRKEYYTEDQPTVSDSEYDKLYRELVELEKAHPELILPNSPTQEVG 60 >gi|113475951|ref|YP_722012.1| NAD-dependent DNA ligase LigA [Trichodesmium erythraeum IMS101] gi|123160812|sp|Q112N5|DNLJ_TRIEI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|110166999|gb|ABG51539.1| DNA ligase, NAD-dependent [Trichodesmium erythraeum IMS101] Length = 774 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + L + YY LD P+ D +YD + L L+ Q+P+L D P V Sbjct: 7 EVEQYTQNLREKLQEAGYSYYVLDQPIMEDAVYDHLLRELQELESQYPQLIVSDSPTQRV 66 Query: 118 G 118 G Sbjct: 67 G 67 >gi|329897281|ref|ZP_08272019.1| DNA ligase [gamma proteobacterium IMCC3088] gi|328921277|gb|EGG28673.1| DNA ligase [gamma proteobacterium IMCC3088] Length = 674 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 27/63 (42%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + + L+ + + + YY D P +D YD++ L L+ Q P+ D P Sbjct: 2 PADPAKRIAELIALIERYSQEYYEHDAPSISDAEYDQLFRELQTLEVQNPQYARRDSPTQ 61 Query: 116 TVG 118 VG Sbjct: 62 RVG 64 >gi|295397184|ref|ZP_06807287.1| NAD-dependent DNA ligase LigA [Aerococcus viridans ATCC 11563] gi|294974573|gb|EFG50297.1| NAD-dependent DNA ligase LigA [Aerococcus viridans ATCC 11563] Length = 670 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L ++ + YY LD+P +D YD++ L L+ ++P + P VG Sbjct: 12 ARIEALTRLLNDYAYQYYALDNPTISDTEYDKLYRELQDLEAKYPTFIQAESPTQRVG 69 >gi|152997408|ref|YP_001342243.1| DNA ligase, NAD-dependent [Marinomonas sp. MWYL1] gi|190359264|sp|A6W0S9|DNLJ_MARMS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|150838332|gb|ABR72308.1| DNA ligase, NAD-dependent [Marinomonas sp. MWYL1] Length = 672 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 29/58 (50%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L++ + Y+ D+P+ D +YDR +L +++ + PE D P VG Sbjct: 4 QQMLDLIQQLNDYSYAYHVKDEPIVPDAVYDRDYRQLQSIEAEHPEWIQADSPTQRVG 61 >gi|225013054|ref|ZP_03703469.1| DNA ligase (NAD(+)) [Flavobacteria bacterium MS024-2A] gi|225002782|gb|EEG40763.1| DNA ligase (NAD(+)) [Flavobacteria bacterium MS024-2A] Length = 183 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 36/62 (58%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E ++E L ++ H YY LDDP+ +D +D++ ++L+ L+ Q P+L D + P Sbjct: 2 QEIRNKIEALREVLHDHNHRYYILDDPIISDYEFDQLLQQLNELEVQNPDLTDLNSPTRR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|218295128|ref|ZP_03495964.1| DNA ligase, NAD-dependent [Thermus aquaticus Y51MC23] gi|218244331|gb|EED10856.1| DNA ligase, NAD-dependent [Thermus aquaticus Y51MC23] Length = 674 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ A V L + +H YY LD P +D YDR+ L L+E+FPEL D P Sbjct: 1 MTLEAARRRVNELRDLIRYHNYLYYVLDAPEISDAEYDRLLRELKELEERFPELQSPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TEQVG 65 >gi|306831054|ref|ZP_07464215.1| NAD-dependent DNA ligase LigA [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426620|gb|EFM29731.1| NAD-dependent DNA ligase LigA [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 652 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV ++K YY D P +D YD++ L L++ PEL + P VG Sbjct: 2 KKRIQELVDELNQYRKEYYTEDQPTVSDSEYDKLYRELVELEKAHPELILPNSPTQEVG 60 >gi|157827661|ref|YP_001496725.1| NAD-dependent DNA ligase LigA [Rickettsia bellii OSU 85-389] gi|166216232|sp|A8GXT8|DNLJ_RICB8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157802965|gb|ABV79688.1| NAD-dependent DNA ligase LigA [Rickettsia bellii OSU 85-389] Length = 689 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 33/70 (47%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 + + +++ EA + L + YY D PL +D YD++ L+++FP L Sbjct: 2 QNIEKINEEEAKKLLIELADKIAQYNHAYYIEDKPLVSDAEYDQLFNTNLKLEQKFPHLI 61 Query: 109 DEDHPWNTVG 118 E+ P +G Sbjct: 62 LENSPSKKIG 71 >gi|300704237|ref|YP_003745840.1| DNA ligase [Ralstonia solanacearum CFBP2957] gi|299071901|emb|CBJ43230.1| DNA ligase [Ralstonia solanacearum CFBP2957] Length = 813 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 23/48 (47%) Query: 71 LHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + YY LD P D YDR+ L+AL+ + P L D P VG Sbjct: 25 NRYAHEYYVLDQPSVPDAEYDRLYRELEALEAEHPALRTPDSPTLRVG 72 >gi|91205008|ref|YP_537363.1| NAD-dependent DNA ligase LigA [Rickettsia bellii RML369-C] gi|122990942|sp|Q1RK40|DNLJ_RICBR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|91068552|gb|ABE04274.1| DNA ligase, NAD-dependent [Rickettsia bellii RML369-C] Length = 689 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 33/70 (47%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 + + +++ EA + L + YY D PL +D YD++ L+++FP L Sbjct: 2 QNIEKINEEEAKKLLIELADKIAQYNHAYYIEDKPLVSDAEYDQLFNTNLKLEQKFPHLI 61 Query: 109 DEDHPWNTVG 118 E+ P +G Sbjct: 62 LENSPSKKIG 71 >gi|1352293|sp|P49422|DNLJ_THESC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|609276|emb|CAA82645.1| DNA ligase [Thermus scotoductus] gi|1093606|prf||2104272A DNA ligase Length = 674 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ EA V L + +H YY L DP +D YDR+ L L+E+FPEL D P Sbjct: 1 MTLEEARKRVNELRDLIRYHNYRYYVLADPEISDAEYDRLLRELKELEERFPELKSPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TEQVG 65 >gi|218509214|ref|ZP_03507092.1| NAD-dependent DNA ligase LigA [Rhizobium etli Brasil 5] Length = 202 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 25/51 (49%) Query: 68 KIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 K HH Y D +D YD + R DAL+ +FPEL ED P VG Sbjct: 6 KEIAHHDALYQGKDQREISDADYDALKRRNDALEVRFPELIREDSPSRHVG 56 >gi|308450080|ref|XP_003088175.1| hypothetical protein CRE_02776 [Caenorhabditis remanei] gi|308249279|gb|EFO93231.1| hypothetical protein CRE_02776 [Caenorhabditis remanei] Length = 1202 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 3/73 (4%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D + V A +E E L ++ YY L +D YD + RL+AL+ FP Sbjct: 169 DSSIPVE---FEAARVEAEQLTAEIERYRAAYYSEATSLVSDAQYDELFHRLEALERAFP 225 Query: 106 ELFDEDHPWNTVG 118 EL +D P VG Sbjct: 226 ELAGQDSPTQEVG 238 >gi|297623824|ref|YP_003705258.1| DNA ligase, NAD-dependent [Truepera radiovictrix DSM 17093] gi|297165004|gb|ADI14715.1| DNA ligase, NAD-dependent [Truepera radiovictrix DSM 17093] Length = 681 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 22/45 (48%) Query: 74 QKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY L DP +D +DR+ L L+E PEL D P VG Sbjct: 22 NYRYYVLQDPELSDAEWDRLFHELKRLEETHPELRTPDSPTQRVG 66 >gi|325570045|ref|ZP_08145970.1| NAD-dependent DNA ligase LigA [Enterococcus casseliflavus ATCC 12755] gi|325156873|gb|EGC69044.1| NAD-dependent DNA ligase LigA [Enterococcus casseliflavus ATCC 12755] Length = 687 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 3/80 (3%) Query: 39 RALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 + L++ D V S E E L + YY D P D LYD++ L Sbjct: 2 KKLKNKEDIRMDVPS---KEIQSRAEELRTQLNQYAYEYYVKDQPSVEDYLYDQLYAELV 58 Query: 99 ALQEQFPELFDEDHPWNTVG 118 ++ +P+L ED P VG Sbjct: 59 EIETNYPQLVTEDSPTQRVG 78 >gi|222151884|ref|YP_002561044.1| DNA ligase [Macrococcus caseolyticus JCSC5402] gi|254781362|sp|B9E830|DNLJ_MACCJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|222121013|dbj|BAH18348.1| DNA ligase [Macrococcus caseolyticus JCSC5402] Length = 663 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V L ++ + Y+ D+P D YD++ L ++ + PEL +D P VG Sbjct: 3 IEQRVTELHQLLHQYNYEYHVQDNPSVPDSEYDKLLHELIDIEREHPELKTDDSPTVRVG 62 >gi|257869253|ref|ZP_05648906.1| NAD-dependent DNA ligase [Enterococcus gallinarum EG2] gi|257803417|gb|EEV32239.1| NAD-dependent DNA ligase [Enterococcus gallinarum EG2] Length = 676 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 27/61 (44%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E E L + YY D P D +YDR+ + L L+ +P+L ED P V Sbjct: 7 EVQQRAEELRTTLNQYAYEYYVKDQPSVEDYVYDRLYKELVQLETDYPQLVTEDSPTQRV 66 Query: 118 G 118 G Sbjct: 67 G 67 >gi|73662196|ref|YP_300977.1| NAD-dependent DNA ligase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|84028903|sp|Q49YU8|DNLJ_STAS1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|72494711|dbj|BAE18032.1| NAD-dependent DNA ligase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 667 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + V+ L ++ + YY D+P D YD++ L ++ Q PE D P Sbjct: 2 ADIQSRVDELHRLLNQYSYEYYVKDNPSVPDSEYDKLLHELIDIETQHPEYRTADSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|81749525|sp|Q8FPZ7|DNLJ_COREF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|23493177|dbj|BAC18148.1| putative DNA ligase [Corynebacterium efficiens YS-314] Length = 938 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 3/84 (3%) Query: 35 LPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVS 94 +P A+ L+ + L + +H+ YY P D +D + Sbjct: 246 VPPPDAIRDHLESGTVTD--DNAQLRRTWNELAEKVRYHRDLYYNQ-QPEIPDADFDALF 302 Query: 95 ERLDALQEQFPELFDEDHPWNTVG 118 +L L+EQ PEL D P VG Sbjct: 303 RQLQDLEEQHPELAVPDSPTKEVG 326 >gi|315641089|ref|ZP_07896168.1| NAD-dependent DNA ligase LigA [Enterococcus italicus DSM 15952] gi|315483097|gb|EFU73614.1| NAD-dependent DNA ligase LigA [Enterococcus italicus DSM 15952] Length = 671 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 28/63 (44%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 K ++ L K + YY D P+ D YD++ ++L AL+ PE D P Sbjct: 2 KQTVAEQIHDLQKKLTEYAYAYYVKDQPVVDDAYYDQLYQQLVALETAHPEYQTSDSPTQ 61 Query: 116 TVG 118 VG Sbjct: 62 RVG 64 >gi|256372325|ref|YP_003110149.1| DNA ligase, NAD-dependent [Acidimicrobium ferrooxidans DSM 10331] gi|256008909|gb|ACU54476.1| DNA ligase, NAD-dependent [Acidimicrobium ferrooxidans DSM 10331] Length = 664 Score = 85.3 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 A V L + + YY DDP+ +D +D + L AL+ PEL D P Sbjct: 3 ESAAARVAALRSLIQRASEAYYVADDPIMSDDEFDGLVLELRALEAAHPELRSPDSPTER 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|270296700|ref|ZP_06202899.1| DNA ligase, NAD-dependent [Bacteroides sp. D20] gi|270272687|gb|EFA18550.1| DNA ligase, NAD-dependent [Bacteroides sp. D20] Length = 665 Score = 85.3 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L H YY L+ P +D +D + L L+++ PE D++ P VG Sbjct: 3 VKEKIDQLRAELHQHNYNYYVLNAPEISDKEFDDLMRELQDLEKEHPEYQDDNSPTMRVG 62 >gi|160889578|ref|ZP_02070581.1| hypothetical protein BACUNI_02004 [Bacteroides uniformis ATCC 8492] gi|317480069|ref|ZP_07939180.1| DNA ligase [Bacteroides sp. 4_1_36] gi|156861095|gb|EDO54526.1| hypothetical protein BACUNI_02004 [Bacteroides uniformis ATCC 8492] gi|316903746|gb|EFV25589.1| DNA ligase [Bacteroides sp. 4_1_36] Length = 665 Score = 85.3 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L H YY L+ P +D +D + L L+++ PE D++ P VG Sbjct: 3 VKEKIDQLRAELHQHNYNYYVLNAPEISDKEFDDLMRELQDLEKEHPEYQDDNSPTMRVG 62 >gi|166215834|sp|Q18E49|DNLJ_HALWD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 736 Score = 85.3 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 1/83 (1%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 PN L + + + LS+ A+ + L + H YY P+ D YD + + Sbjct: 51 PNNPYLSNIDGDFRPIEQLSEEAAVEQATQLREAIREHDYQYYIRASPIIADRAYDILFD 110 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 RL AL++ F L E P VG Sbjct: 111 RLQALEDIF-NLDTEASPTRRVG 132 >gi|134102614|ref|YP_001108275.1| NAD-dependent DNA ligase LigA [Saccharopolyspora erythraea NRRL 2338] gi|291004701|ref|ZP_06562674.1| NAD-dependent DNA ligase LigA [Saccharopolyspora erythraea NRRL 2338] gi|166216238|sp|A4FMS5|DNLJ_SACEN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|133915237|emb|CAM05350.1| DNA ligase, NAD-dependent [Saccharopolyspora erythraea NRRL 2338] Length = 727 Score = 85.3 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV+ HQ YY LD P +DG +D + L L+ P L D D P VG Sbjct: 43 VRERYADLVEQVRAHQFRYYVLDSPTISDGEFDELFTELQTLESDHPALRDPDSPTQVVG 102 >gi|300709542|ref|YP_003735356.1| NAD-dependent DNA ligase LigA [Halalkalicoccus jeotgali B3] gi|299123225|gb|ADJ13564.1| NAD-dependent DNA ligase LigA [Halalkalicoccus jeotgali B3] Length = 703 Score = 85.3 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 + L EA E L + HH + YY +DP D YD + +RL ++E F L Sbjct: 18 TPIDELD--EAEREARRLREAIRHHDRRYYVENDPEIADRTYDTLFQRLVDIEESF-GLQ 74 Query: 109 DEDHPWNTVG 118 D P VG Sbjct: 75 IPDSPTRRVG 84 >gi|189465636|ref|ZP_03014421.1| hypothetical protein BACINT_01996 [Bacteroides intestinalis DSM 17393] gi|189437910|gb|EDV06895.1| hypothetical protein BACINT_01996 [Bacteroides intestinalis DSM 17393] Length = 665 Score = 85.3 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A +++ L H YY L+ P +D +D + L ++ + PE DE P VG Sbjct: 3 AKEKIDQLRAELHRHNYNYYVLNAPEISDKEFDDMMRELQEMEREHPEYQDETSPTMRVG 62 >gi|262047040|ref|ZP_06019999.1| DNA ligase, NAD-dependent [Lactobacillus crispatus MV-3A-US] gi|293381897|ref|ZP_06627865.1| DNA ligase, NAD-dependent [Lactobacillus crispatus 214-1] gi|260572617|gb|EEX29178.1| DNA ligase, NAD-dependent [Lactobacillus crispatus MV-3A-US] gi|290921544|gb|EFD98578.1| DNA ligase, NAD-dependent [Lactobacillus crispatus 214-1] Length = 668 Score = 84.9 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 30/67 (44%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ EA E L K + YY D P D +YD+ RL L+++FPE+ D Sbjct: 2 AEITLDEAKKEAASLRKQLNEWAEAYYSKDAPEVEDNVYDQSYNRLLELEKEFPEIVTPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|198274661|ref|ZP_03207193.1| hypothetical protein BACPLE_00817 [Bacteroides plebeius DSM 17135] gi|198272108|gb|EDY96377.1| hypothetical protein BACPLE_00817 [Bacteroides plebeius DSM 17135] Length = 666 Score = 84.9 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + ++ L + H YY L+ P +D +DR+ L L+ + PE +DE+ P VG Sbjct: 4 IERIDQLREELHTHNHNYYILNAPTISDQEFDRLMRELQDLEAKHPEHYDENSPSVRVG 62 >gi|116873191|ref|YP_849972.1| NAD-dependent DNA ligase LigA [Listeria welshimeri serovar 6b str. SLCC5334] gi|123466434|sp|A0AJL1|DNLJ_LISW6 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116742069|emb|CAK21193.1| DNA ligase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 670 Score = 84.9 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L+ I + YY +D+P D YD+ + L ++E PE D P VG Sbjct: 4 KKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKIEEAHPEWVTPDSPSKRVG 62 >gi|327541957|gb|EGF28460.1| NAD-dependent DNA ligase LigA [Rhodopirellula baltica WH47] Length = 754 Score = 84.9 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V+ LV H + YY P TD YD++ L L+ ++PEL D P VG Sbjct: 60 IASRVQQLVDEINRHNRLYYDDAAPEITDLQYDQLLAELTQLENEYPELRQPDSPTQLVG 119 >gi|256844676|ref|ZP_05550161.1| DNA ligase, NAD-dependent [Lactobacillus crispatus 125-2-CHN] gi|256613217|gb|EEU18421.1| DNA ligase, NAD-dependent [Lactobacillus crispatus 125-2-CHN] Length = 668 Score = 84.9 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 30/67 (44%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ EA E L K + YY D P D +YD+ RL L+++FPE+ D Sbjct: 2 AEITLDEAKKEAASLRKQLNEWAEAYYSKDAPEVEDNVYDQSYNRLLELEKEFPEIVTPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|87308785|ref|ZP_01090924.1| DNA ligase [Blastopirellula marina DSM 3645] gi|87288496|gb|EAQ80391.1| DNA ligase [Blastopirellula marina DSM 3645] Length = 679 Score = 84.9 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E+++L H + YY +D YD++ RL L+ + P+L D P Sbjct: 2 AAVQEEIDHLRAEIRRHDRMYYVEAKTEISDLEYDQLLNRLKHLEAENPQLVTPDSPTQR 61 Query: 117 VG 118 +G Sbjct: 62 IG 63 >gi|289644234|ref|ZP_06476323.1| DNA ligase, NAD-dependent [Frankia symbiont of Datisca glomerata] gi|289505957|gb|EFD26967.1| DNA ligase, NAD-dependent [Frankia symbiont of Datisca glomerata] Length = 713 Score = 84.9 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 22/46 (47%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 H YY LD P +D YD++ L L+ ++P L D P V Sbjct: 41 EHAFRYYVLDSPTVSDAEYDQLMAELTQLETRYPGLRTPDSPTQKV 86 >gi|124026855|ref|YP_001015970.1| NAD-dependent DNA ligase [Prochlorococcus marinus str. NATL1A] gi|166216227|sp|A2C5E6|DNLJ_PROM1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|123961923|gb|ABM76706.1| NAD-dependent DNA ligase [Prochlorococcus marinus str. NATL1A] Length = 690 Score = 84.9 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 25/58 (43%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + YY LD P D +YD++ L ++ P L +D P +G Sbjct: 10 ERIKELRALLNKANYSYYVLDSPEIDDAVYDQLYRELIEIENIHPSLITDDSPSQRLG 67 >gi|227877013|ref|ZP_03995105.1| DNA ligase [Lactobacillus crispatus JV-V01] gi|256850560|ref|ZP_05555986.1| DNA ligase [Lactobacillus crispatus MV-1A-US] gi|227863384|gb|EEJ70811.1| DNA ligase [Lactobacillus crispatus JV-V01] gi|256712583|gb|EEU27578.1| DNA ligase [Lactobacillus crispatus MV-1A-US] Length = 668 Score = 84.9 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 30/67 (44%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ EA E L K + YY D P D +YD+ RL L+++FPE+ D Sbjct: 2 AEITLDEAKKEAASLRKQLNEWAEAYYSKDAPEVEDNVYDQSYNRLLELEKEFPEIVTPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|295692390|ref|YP_003601000.1| DNA ligase [Lactobacillus crispatus ST1] gi|295030496|emb|CBL49975.1| DNA ligase [Lactobacillus crispatus ST1] Length = 668 Score = 84.9 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 30/67 (44%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ EA E L K + YY D P D +YD+ RL L+++FPE+ D Sbjct: 2 AEITLDEAKKEAASLRKQLNEWAEAYYSKDAPEVEDNVYDQSYNRLLELEKEFPEIVTPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|229823252|ref|ZP_04449321.1| hypothetical protein GCWU000282_00550 [Catonella morbi ATCC 51271] gi|229787418|gb|EEP23532.1| hypothetical protein GCWU000282_00550 [Catonella morbi ATCC 51271] Length = 671 Score = 84.9 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 25/59 (42%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E + + + YY LD L +D YD + L+ ++ PE D P VG Sbjct: 9 QARLEEVKHLLNDYAYHYYVLDQSLVSDASYDALYRELEEIEAAHPEWITPDSPTQRVG 67 >gi|254445017|ref|ZP_05058493.1| DNA ligase, NAD-dependent [Verrucomicrobiae bacterium DG1235] gi|198259325|gb|EDY83633.1| DNA ligase, NAD-dependent [Verrucomicrobiae bacterium DG1235] Length = 668 Score = 84.9 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK + +E L H + YYR +P +D YD + L L+ PEL E P Sbjct: 1 MSKASDLKRIEQLRAEIRRHDELYYRNAEPEISDFDYDGLKRELADLEAANPELPMEASP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQAVG 65 >gi|189461356|ref|ZP_03010141.1| hypothetical protein BACCOP_02011 [Bacteroides coprocola DSM 17136] gi|189431885|gb|EDV00870.1| hypothetical protein BACCOP_02011 [Bacteroides coprocola DSM 17136] Length = 667 Score = 84.9 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + ++ L + H YY L+ P+ +D +D++ L L+ PE +D + P VG Sbjct: 4 IERIDQLREELHVHNYNYYVLNAPVISDLEFDKLMRELQDLEALHPEYYDPNSPSVRVG 62 >gi|297559142|ref|YP_003678116.1| DNA ligase, NAD-dependent [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843590|gb|ADH65610.1| DNA ligase, NAD-dependent [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 775 Score = 84.9 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 1/72 (1%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 A T+ E L + H YY L P+ +D YD + L +++ +P Sbjct: 2 SAPDTTTDIPDEVRARHTELCQELDDHSYRYY-LGTPVISDAEYDTLMRELVGIEDSYPA 60 Query: 107 LFDEDHPWNTVG 118 L +D P VG Sbjct: 61 LATQDSPTQKVG 72 >gi|46199040|ref|YP_004707.1| NAD-dependent DNA ligase [Thermus thermophilus HB27] gi|81405933|sp|Q72JN8|DNLJ_THET2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|46196664|gb|AAS81080.1| NAD-dependent DNA ligase [Thermus thermophilus HB27] Length = 676 Score = 84.9 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ EA V L + +H YY L DP +D YDR+ L L+E+FPEL D P Sbjct: 1 MTLEEARKRVNELRDLIRYHNYRYYVLADPEISDAEYDRLLRELKELEERFPELKSPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TEQVG 65 >gi|294793797|ref|ZP_06758934.1| DNA ligase, NAD-dependent [Veillonella sp. 3_1_44] gi|294455367|gb|EFG23739.1| DNA ligase, NAD-dependent [Veillonella sp. 3_1_44] Length = 667 Score = 84.9 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 23/59 (38%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + H Q YY D P +D YD+ L L+ PE P VG Sbjct: 4 KDRIKELQQELTHAQYLYYVKDAPTMSDFEYDKKYRELVDLETAHPEYIVSSSPTQRVG 62 >gi|257865964|ref|ZP_05645617.1| DNA ligase [Enterococcus casseliflavus EC30] gi|257872297|ref|ZP_05651950.1| DNA ligase [Enterococcus casseliflavus EC10] gi|257799898|gb|EEV28950.1| DNA ligase [Enterococcus casseliflavus EC30] gi|257806461|gb|EEV35283.1| DNA ligase [Enterococcus casseliflavus EC10] Length = 676 Score = 84.5 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E E L + YY D P D LYD++ L ++ +P+L ED P Sbjct: 6 KEIQSRAEELRTQLNQYAYEYYVKDQPSVEDYLYDQLYAELVEIETNYPQLVTEDSPTQR 65 Query: 117 VG 118 VG Sbjct: 66 VG 67 >gi|284032790|ref|YP_003382721.1| DNA ligase, NAD-dependent [Kribbella flavida DSM 17836] gi|283812083|gb|ADB33922.1| DNA ligase, NAD-dependent [Kribbella flavida DSM 17836] Length = 709 Score = 84.5 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 1/63 (1%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 E L + H+ YY + +D +D + L +++Q+ EL D P Sbjct: 17 PAEVRERHAALSREIEEHRFRYY-MATSTISDADFDALMHELQGIEQQYQELRTPDSPTQ 75 Query: 116 TVG 118 VG Sbjct: 76 KVG 78 >gi|251809892|ref|ZP_04824365.1| DNA ligase, NAD-dependent [Staphylococcus epidermidis BCM-HMP0060] gi|282874546|ref|ZP_06283431.1| DNA ligase (NAD(+)) [Staphylococcus epidermidis SK135] gi|293367782|ref|ZP_06614431.1| DNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|251806557|gb|EES59214.1| DNA ligase, NAD-dependent [Staphylococcus epidermidis BCM-HMP0060] gi|281296685|gb|EFA89194.1| DNA ligase (NAD(+)) [Staphylococcus epidermidis SK135] gi|291318121|gb|EFE58518.1| DNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|329734727|gb|EGG71033.1| DNA ligase (NAD+) [Staphylococcus epidermidis VCU045] gi|329734798|gb|EGG71103.1| DNA ligase (NAD+) [Staphylococcus epidermidis VCU028] Length = 665 Score = 84.5 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + VE L + + YY D+P D YD++ L ++E++PE D P Sbjct: 2 QDVKKRVEKLHDLLNQYSYEYYVQDNPSVPDSEYDKLLHELIEIEEKYPEFKSTDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|27468507|ref|NP_765144.1| DNA ligase [Staphylococcus epidermidis ATCC 12228] gi|81843559|sp|Q8CRU0|DNLJ_STAES RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|27316054|gb|AAO05188.1|AE016749_134 DNA ligase [Staphylococcus epidermidis ATCC 12228] Length = 665 Score = 84.5 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + VE L + + YY D+P D YD++ L ++E++PE D P Sbjct: 2 QDVKKRVEKLHDLLNQYSYEYYVQDNPSVPDSEYDKLLHELIEIEEKYPEFKSTDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|319939188|ref|ZP_08013551.1| DNA ligase [Streptococcus anginosus 1_2_62CV] gi|319811584|gb|EFW07860.1| DNA ligase [Streptococcus anginosus 1_2_62CV] Length = 652 Score = 84.5 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LVK+ + YY D+P +D YD++ L L++Q+PE D P + VG Sbjct: 2 KDRMLELVKLLNQYAHEYYTTDNPSVSDSEYDKLYHELLDLEKQYPEFVQPDSPTHRVG 60 >gi|323342976|ref|ZP_08083207.1| NAD-dependent DNA ligase LigA [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463040|gb|EFY08235.1| NAD-dependent DNA ligase LigA [Erysipelothrix rhusiopathiae ATCC 19414] Length = 659 Score = 84.5 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + + L K + Y+ +D P D YD++ L+ L+ + PE FD + P VG Sbjct: 2 SKERILALRKKLHQYNYEYHVMDQPTIADVEYDQLLRELNELEVKHPEFFDINSPTQKVG 61 >gi|257875591|ref|ZP_05655244.1| DNA ligase [Enterococcus casseliflavus EC20] gi|257809757|gb|EEV38577.1| DNA ligase [Enterococcus casseliflavus EC20] Length = 676 Score = 84.5 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E E L + YY D P D LYD++ L ++ +P+L ED P Sbjct: 6 KEIQSRAEELRTQLNQYAYEYYVKDQPSVEDYLYDQLYAELVEIETNYPQLVTEDSPTQR 65 Query: 117 VG 118 VG Sbjct: 66 VG 67 >gi|42519595|ref|NP_965525.1| NAD-dependent DNA ligase [Lactobacillus johnsonii NCC 533] gi|81667534|sp|Q74I49|DNLJ_LACJO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|41583884|gb|AAS09491.1| NAD-dependent DNA ligase [Lactobacillus johnsonii NCC 533] Length = 668 Score = 84.5 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ EA +V+ L K YY D P+ D +YD+ + L L+EQFP+L D Sbjct: 4 LTHNEASQKVDELRKKLDKWADDYYAKDAPVVEDAVYDKTYQELVELEEQFPDLVTADSI 63 Query: 114 WNTVG 118 VG Sbjct: 64 TQRVG 68 >gi|326804258|ref|YP_004322076.1| DNA ligase (NAD+) [Aerococcus urinae ACS-120-V-Col10a] gi|326651204|gb|AEA01387.1| DNA ligase (NAD+) [Aerococcus urinae ACS-120-V-Col10a] Length = 677 Score = 84.5 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Query: 49 KKVTSLSKGEAMIE-VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 K+ + +A+ E + LV + YY LD P +D YD+ +L+ L+ P+L Sbjct: 3 KENPAQENQQAVQERMAALVDQLNQYAHEYYVLDQPSVSDDHYDKTYRQLEELEASHPDL 62 Query: 108 FDEDHPWNTVG 118 D P VG Sbjct: 63 IQSDSPTQRVG 73 >gi|224539983|ref|ZP_03680522.1| hypothetical protein BACCELL_04895 [Bacteroides cellulosilyticus DSM 14838] gi|224518409|gb|EEF87514.1| hypothetical protein BACCELL_04895 [Bacteroides cellulosilyticus DSM 14838] Length = 694 Score = 84.5 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A +++ L H YY L+ P +D +D + L ++ + PE DE P VG Sbjct: 32 AKEKIDQLRAELHRHNYNYYVLNAPEISDKEFDDMMRELQDMEREHPEYQDETSPTMRVG 91 >gi|319399869|gb|EFV88116.1| DNA ligase, NAD-dependent [Staphylococcus epidermidis FRI909] Length = 665 Score = 84.5 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + VE L + + YY D+P D YD++ L ++E++PE D P Sbjct: 2 QDVKKRVEKLHDLLNQYSYEYYVQDNPSVPDSEYDKLLHELIEIEEKYPEFKSTDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|325297787|ref|YP_004257704.1| DNA ligase [Bacteroides salanitronis DSM 18170] gi|324317340|gb|ADY35231.1| DNA ligase [Bacteroides salanitronis DSM 18170] Length = 667 Score = 84.5 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + ++ L + H YY + P+ +D +D + L L+ + PE +D + P VG Sbjct: 4 IERIDQLREELHLHNYKYYVENAPVISDQEFDHLMRELQDLEARHPEHYDPNSPSVRVG 62 >gi|11513386|pdb|1DGS|A Chain A, Crystal Structure Of Nad+-Dependent Dna Ligase From T. Filiformis gi|11513387|pdb|1DGS|B Chain B, Crystal Structure Of Nad+-Dependent Dna Ligase From T. Filiformis Length = 667 Score = 84.5 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ EA + L + +H YY L DP +D YDR+ L L+E+FPE D P Sbjct: 1 MTREEARRRINELRDLIRYHNYRYYVLADPEISDAEYDRLLRELKELEERFPEFKSPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TEQVG 65 >gi|242241743|ref|ZP_04796188.1| DNA ligase [Staphylococcus epidermidis W23144] gi|242234833|gb|EES37144.1| DNA ligase [Staphylococcus epidermidis W23144] Length = 665 Score = 84.5 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + VE L + + YY D+P D YD++ L ++E++PE D P Sbjct: 2 QDVKKRVEKLHDLLNQYSYEYYVQDNPSVPDSEYDKLLHELIEIEEKYPEFKSTDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|323490410|ref|ZP_08095622.1| DNA ligase [Planococcus donghaensis MPA1U2] gi|323395909|gb|EGA88743.1| DNA ligase [Planococcus donghaensis MPA1U2] Length = 668 Score = 84.5 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A V+ L ++ ++ YY LD P D +YD++ L L+ +P+L D P Sbjct: 1 MDRLKAEQRVDELNEMLRNYGHAYYVLDKPAVPDAIYDQLLNELIDLETLYPDLVFPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|154492286|ref|ZP_02031912.1| hypothetical protein PARMER_01920 [Parabacteroides merdae ATCC 43184] gi|154087511|gb|EDN86556.1| hypothetical protein PARMER_01920 [Parabacteroides merdae ATCC 43184] Length = 666 Score = 84.5 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L + H YY L P +D +D + + L L+E PE D P VG Sbjct: 3 VKDKIKALREALEQHNYNYYVLSAPTISDREFDEMMKELQVLEESHPEYADPHSPTQRVG 62 >gi|57867376|ref|YP_189011.1| DNA ligase, NAD-dependent [Staphylococcus epidermidis RP62A] gi|81674000|sp|Q5HN30|DNLJ_STAEQ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|57638034|gb|AAW54822.1| DNA ligase, NAD-dependent [Staphylococcus epidermidis RP62A] Length = 665 Score = 84.5 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 VE L + + YY D+P D YD++ L ++E++PE D P VG Sbjct: 4 VKKRVEKLHDLLNQYSYEYYVQDNPSVPDSEYDKLLHELIEIEEKYPEFKSTDSPTVRVG 63 >gi|29346304|ref|NP_809807.1| DNA ligase [Bacteroides thetaiotaomicron VPI-5482] gi|253568276|ref|ZP_04845687.1| DNA ligase [Bacteroides sp. 1_1_6] gi|81445157|sp|Q8A9C1|DNLJ_BACTN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|29338199|gb|AAO76001.1| DNA ligase [Bacteroides thetaiotaomicron VPI-5482] gi|251842349|gb|EES70429.1| DNA ligase [Bacteroides sp. 1_1_6] Length = 666 Score = 84.5 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 26/61 (42%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++E L H YY L+ P +D +D L L+ PE DE+ P V Sbjct: 2 DIKEKIEELRAELHRHNYNYYVLNAPEISDKEFDDKMRELQDLELAHPEYKDENSPTMRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|305667253|ref|YP_003863540.1| DNA ligase [Maribacter sp. HTCC2170] gi|88708187|gb|EAR00425.1| DNA ligase [Maribacter sp. HTCC2170] Length = 664 Score = 84.1 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L H YY LD+P +D +D + L L+ + PE +D P VG Sbjct: 3 VRQKIEALRAELREHNHNYYVLDNPTISDYDFDMKLKELQELEAKHPEFYDATSPTLRVG 62 >gi|282889962|ref|ZP_06298497.1| hypothetical protein pah_c008o052 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500155|gb|EFB42439.1| hypothetical protein pah_c008o052 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 668 Score = 84.1 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++K + + L H K YY P+ +D +D + +L+ ++++ PE P Sbjct: 1 MTKPSSHQSYQELCNQIWSHNKAYYVDHRPVISDEEFDHLMHQLEQMEKEHPEWISSASP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|224543223|ref|ZP_03683762.1| hypothetical protein CATMIT_02423 [Catenibacterium mitsuokai DSM 15897] gi|224523856|gb|EEF92961.1| hypothetical protein CATMIT_02423 [Catenibacterium mitsuokai DSM 15897] Length = 664 Score = 84.1 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 25/58 (43%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + YY D+P +D YDR+ E L +++ P D P VG Sbjct: 7 ERLNELKALLNKYNYEYYVQDNPTVSDQEYDRLMEELIRIEQVNPAWITTDSPSQRVG 64 >gi|298385661|ref|ZP_06995219.1| DNA ligase, NAD-dependent [Bacteroides sp. 1_1_14] gi|298261802|gb|EFI04668.1| DNA ligase, NAD-dependent [Bacteroides sp. 1_1_14] Length = 666 Score = 84.1 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 26/61 (42%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++E L H YY L+ P +D +D L L+ PE DE+ P V Sbjct: 2 DIKEKIEELRAELHRHNYNYYVLNAPEISDKEFDDKMRELQDLELAHPEYKDENSPTMRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|228472685|ref|ZP_04057445.1| DNA ligase, NAD-dependent [Capnocytophaga gingivalis ATCC 33624] gi|228276098|gb|EEK14854.1| DNA ligase, NAD-dependent [Capnocytophaga gingivalis ATCC 33624] Length = 666 Score = 84.1 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + ++E L K H YY LD P +D +D+ + L L+ Q+P+ D + P VG Sbjct: 4 ILQQIEALRKELNEHNYNYYVLDTPSISDYEFDQKLKALQDLEAQYPQYKDPNSPTVRVG 63 >gi|317495223|ref|ZP_07953593.1| DNA ligase [Gemella moribillum M424] gi|316914645|gb|EFV36121.1| DNA ligase [Gemella moribillum M424] Length = 663 Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 32/62 (51%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E+ LV + + YY D+P +D YD + ++L+ L++++PE ++ P Sbjct: 2 EHIKEEIFKLVALLNKYSYDYYVEDNPQISDTEYDTLYKQLEKLEQEYPEFILDNSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|227893041|ref|ZP_04010846.1| DNA ligase [Lactobacillus ultunensis DSM 16047] gi|227865154|gb|EEJ72575.1| DNA ligase [Lactobacillus ultunensis DSM 16047] Length = 667 Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 28/67 (41%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 T ++ EA E L YY D P D +YD+ RL L+ QFPE+ D Sbjct: 2 TEITLDEAKKEAASLRTQLNEWADAYYSKDAPEVEDNVYDQSYNRLLELERQFPEIVTPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|312863154|ref|ZP_07723392.1| DNA ligase (NAD+) [Streptococcus vestibularis F0396] gi|322516268|ref|ZP_08069198.1| NAD-dependent DNA ligase LigA [Streptococcus vestibularis ATCC 49124] gi|311100690|gb|EFQ58895.1| DNA ligase (NAD+) [Streptococcus vestibularis F0396] gi|322125241|gb|EFX96614.1| NAD-dependent DNA ligase LigA [Streptococcus vestibularis ATCC 49124] Length = 652 Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV + K YY D+P +D YD++ L L+ + PEL D P + VG Sbjct: 2 EKRMKELVSKLNQYAKEYYTEDNPSVSDADYDKLYRELVDLEVEHPELVQADSPTHRVG 60 >gi|298712196|emb|CBJ33067.1| DNA ligase, NAD-dependent [Ectocarpus siliculosus] Length = 1170 Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 34/72 (47%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 + K V +L + EA E+E L + H YY D P TD YD + R ++ FP Sbjct: 168 RFKDVATLEEAEAAAELEALSEEIAAHDVRYYLEDVPSVTDAEYDALRLRNGEIEAAFPS 227 Query: 107 LFDEDHPWNTVG 118 L D P + VG Sbjct: 228 LVRSDSPSSRVG 239 >gi|89054995|ref|YP_510446.1| DNA ligase, NAD-dependent [Jannaschia sp. CCS1] gi|123401112|sp|Q28PE1|DNLJ_JANSC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|88864544|gb|ABD55421.1| DNA ligase NAD-dependent [Jannaschia sp. CCS1] Length = 752 Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 26/64 (40%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S A + L K Y+ D P +D YD + A++ FP+L D P Sbjct: 16 SADAAKTRLAELAKRLSDANTAYHAADAPDLSDADYDALKRENAAIEAAFPDLKRADSPS 75 Query: 115 NTVG 118 + VG Sbjct: 76 DQVG 79 >gi|3800758|gb|AAC68862.1| thermostable DNA ligase [Thermus filiformis] Length = 667 Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ EA + L + +H YY L DP +D YDR+ L L+E+FPE D P Sbjct: 1 MTREEARRRINELRDLIRYHNYRYYVLADPEISDAEYDRLLRELKELEERFPEFKSPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TEQVG 65 >gi|298372045|ref|ZP_06982035.1| DNA ligase, NAD-dependent [Bacteroidetes oral taxon 274 str. F0058] gi|298274949|gb|EFI16500.1| DNA ligase, NAD-dependent [Bacteroidetes oral taxon 274 str. F0058] Length = 670 Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 35/65 (53%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + ++ L K H YY ++P +D +D ++L+++++ +PE FD++ P Sbjct: 1 MANTDIEQQIIKLRKEIEAHNHAYYVDNNPTISDFEFDMRLKQLESMEKAYPEYFDKNSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|308176651|ref|YP_003916057.1| DNA ligase [Arthrobacter arilaitensis Re117] gi|307744114|emb|CBT75086.1| DNA ligase [Arthrobacter arilaitensis Re117] Length = 767 Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Query: 46 DKAKKVTSLSKGEA-MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 D A T+ EA + LV+ H+ YY+ D PL +D YD + L L+ + Sbjct: 14 DVAPVETTNVPPEADKTRYDQLVEQIRAHRDAYYQNDAPLVSDVEYDALFHELQLLEATY 73 Query: 105 PELFDEDHPWNTVG 118 P L +D P VG Sbjct: 74 PILAGQDSPTQEVG 87 >gi|292657108|ref|YP_003537005.1| DNA ligase, NAD-dependent [Haloferax volcanii DS2] gi|291370943|gb|ADE03170.1| DNA ligase, NAD-dependent [Haloferax volcanii DS2] Length = 699 Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 + + SLS+ A + L + H YY DPL +D YD + RL AL++ F + Sbjct: 20 EFEPAESLSREAAEGQAALLREAVREHDHRYYVAADPLVSDAAYDALFSRLVALEDAF-D 78 Query: 107 LFDEDHPWNTVG 118 L + P N VG Sbjct: 79 LDTTNSPTNRVG 90 >gi|298528094|ref|ZP_07015498.1| DNA ligase, NAD-dependent [Desulfonatronospira thiodismutans ASO3-1] gi|298511746|gb|EFI35648.1| DNA ligase, NAD-dependent [Desulfonatronospira thiodismutans ASO3-1] Length = 679 Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 29/63 (46%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + E L + H +YY LDDPL +D YDR+ L L+E+ P L P Sbjct: 5 QEHIEHRAEELRREINLHNYYYYVLDDPLISDVEYDRMLAELKDLEEKHPGLKHSGSPTM 64 Query: 116 TVG 118 VG Sbjct: 65 KVG 67 >gi|70726048|ref|YP_252962.1| DNA ligase [Staphylococcus haemolyticus JCSC1435] gi|84028902|sp|Q4L7L9|DNLJ_STAHJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|68446772|dbj|BAE04356.1| DNA ligase [Staphylococcus haemolyticus JCSC1435] Length = 667 Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 24/60 (40%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V L + + YY D+P D YD++ L ++E PE D P VG Sbjct: 4 IKSRVNELHDLLNQYGYEYYVQDNPSVPDSEYDKLLRELIDIEEAHPEFKSPDSPTVRVG 63 >gi|146277206|ref|YP_001167365.1| DNA ligase, NAD-dependent [Rhodobacter sphaeroides ATCC 17025] gi|166216230|sp|A4WRP6|DNLJ_RHOS5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145555447|gb|ABP70060.1| DNA ligase, NAD-dependent [Rhodobacter sphaeroides ATCC 17025] Length = 704 Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 35/74 (47%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + + V L++ EA E+ +L + Y+ D P +D YD + R A++E+F Sbjct: 1 MQDERPVDQLTEAEAAAELAHLAEAIAAADTAYHTHDAPRISDADYDALKRRNRAIEERF 60 Query: 105 PELFDEDHPWNTVG 118 P L D P VG Sbjct: 61 PALRRSDSPSERVG 74 >gi|76801093|ref|YP_326101.1| NAD-dependent DNA ligase LigA [Natronomonas pharaonis DSM 2160] gi|121729348|sp|Q3ITK1|DNLJ_NATPD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|76556958|emb|CAI48532.1| DNA ligase (NAD) [Natronomonas pharaonis DSM 2160] Length = 691 Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 + V L A +VE L + H YY+L DP+ +D YD++ ERL+ L+ +F + Sbjct: 16 DFEPVDELDAASATRQVETLREAIRFHDYRYYQLADPVISDRAYDQLFERLERLESKF-D 74 Query: 107 LFDEDHPWNTVG 118 P VG Sbjct: 75 RSSATSPTQRVG 86 >gi|15604557|ref|NP_221075.1| NAD-dependent DNA ligase LigA [Rickettsia prowazekii str. Madrid E] gi|6225281|sp|Q9ZCK9|DNLJ_RICPR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|3861252|emb|CAA15151.1| DNA LIGASE (lig) [Rickettsia prowazekii] gi|292572364|gb|ADE30279.1| DNA ligase, NAD-dependent [Rickettsia prowazekii Rp22] Length = 689 Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 + + +S+ EA ++ L + YY D+PL +D YD++ L+ FP L Sbjct: 2 QNIDLISEQEAKKLLKELADKIAMYNHAYYIEDNPLVSDSEYDQLFNINLKLENTFPHLV 61 Query: 109 DEDHPWNTVG 118 + P VG Sbjct: 62 LSNSPSKKVG 71 >gi|323464000|gb|ADX76153.1| DNA ligase, NAD-dependent [Staphylococcus pseudintermedius ED99] Length = 667 Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 VE L K+ + Y+ D+P D YD++ L ++ + PEL D P VG Sbjct: 4 IAQRVEILHKLLHQYNYEYHVQDNPSVPDSEYDKLLHELIDIETKHPELKTSDSPTVRVG 63 >gi|300858287|ref|YP_003783270.1| DNA ligase [Corynebacterium pseudotuberculosis FRC41] gi|300685741|gb|ADK28663.1| DNA ligase [Corynebacterium pseudotuberculosis FRC41] gi|302206007|gb|ADL10349.1| NAD-dependent DNA ligase LigA [Corynebacterium pseudotuberculosis C231] gi|302330560|gb|ADL20754.1| NAD-dependent DNA ligase LigA [Corynebacterium pseudotuberculosis 1002] gi|308276242|gb|ADO26141.1| NAD-dependent DNA ligase LigA [Corynebacterium pseudotuberculosis I19] Length = 694 Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 + + + S E + + L + +H+ YY D P +D +D + L L+E+ P Sbjct: 11 NDKLDIVTDSNIELRRQWDELAEQVRYHRDAYY-NDTPEISDQDFDALFRTLQKLEEEHP 69 Query: 106 ELFDEDHPWNTVG 118 EL D P VG Sbjct: 70 ELAVPDSPTLEVG 82 >gi|55981066|ref|YP_144363.1| DNA ligase [NAD+] [Thermus thermophilus HB8] gi|118780|sp|P26996|DNLJ_THET8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+]; AltName: Full=Tth DNA ligase gi|94721|pir||A40363 DNA ligase (NAD) (EC 6.5.1.2) - Thermus aquaticus gi|155088|gb|AAA27486.1| DNA ligase [Thermus thermophilus] gi|155090|gb|AAA27487.1| DNA ligase [Thermus thermophilus] gi|55772479|dbj|BAD70920.1| DNA ligase [NAD+] [Thermus thermophilus HB8] Length = 676 Score = 83.8 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ EA V L + +H YY L DP +D YDR+ L L+E+FPEL D P Sbjct: 1 MTLEEARKRVNELRDLIRYHNYRYYVLADPEISDAEYDRLLRELKELEERFPELKSPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TLQVG 65 >gi|304385588|ref|ZP_07367932.1| NAD-dependent DNA ligase LigA [Pediococcus acidilactici DSM 20284] gi|304328092|gb|EFL95314.1| NAD-dependent DNA ligase LigA [Pediococcus acidilactici DSM 20284] Length = 675 Score = 83.8 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 31/74 (41%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + K + ++ EA E L + + YY D P D +YD L AL++ F Sbjct: 1 MSLPKPIEKMNLTEANELAEQLREKLDRWSELYYTKDAPEVEDYVYDENYADLQALEQAF 60 Query: 105 PELFDEDHPWNTVG 118 PE+ D VG Sbjct: 61 PEIASPDSITQRVG 74 >gi|270290149|ref|ZP_06196375.1| DNA ligase, NAD-dependent [Pediococcus acidilactici 7_4] gi|270281686|gb|EFA27518.1| DNA ligase, NAD-dependent [Pediococcus acidilactici 7_4] Length = 675 Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 31/74 (41%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + K + ++ EA E L + + YY D P D +YD L AL++ F Sbjct: 1 MSLPKPIEKMNLTEANELAEQLREKLDRWSELYYTKDAPEVEDYVYDENYADLQALEQAF 60 Query: 105 PELFDEDHPWNTVG 118 PE+ D VG Sbjct: 61 PEIASPDSITQRVG 74 >gi|319892947|ref|YP_004149822.1| DNA ligase [Staphylococcus pseudintermedius HKU10-03] gi|317162643|gb|ADV06186.1| DNA ligase [Staphylococcus pseudintermedius HKU10-03] Length = 667 Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 VE L K+ + Y+ D+P D YD++ L ++ + PEL D P VG Sbjct: 4 IAQRVEILHKLLHQYNYEYHVQDNPSVPDSEYDKLLHELIDIETKHPELKTSDSPTVRVG 63 >gi|257053690|ref|YP_003131523.1| NAD-dependent DNA ligase LigA [Halorhabdus utahensis DSM 12940] gi|256692453|gb|ACV12790.1| DNA ligase, NAD-dependent [Halorhabdus utahensis DSM 12940] Length = 693 Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 P+ +E+ + V +L A + E L + +H YY +DP+ D YD + Sbjct: 7 PDNPYVENPPTDFESVDALDAESAHEQAEQLREAIRYHDHQYYVENDPVIGDRTYDALFA 66 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 RL L++ F L E+ P VG Sbjct: 67 RLQDLEDGF-GLDRENSPTQRVG 88 >gi|291513768|emb|CBK62978.1| DNA ligase, NAD-dependent [Alistipes shahii WAL 8301] Length = 674 Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 24/60 (40%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L + H YY + P +D +D + L L+ PE D + P VG Sbjct: 2 VRERIEELRRQLELHNFKYYVENAPEISDFEFDAMMRELQDLERAHPEYADPNSPSVRVG 61 >gi|187251632|ref|YP_001876114.1| DNA ligase, NAD-dependent [Elusimicrobium minutum Pei191] gi|254781329|sp|B2KE31|DNLJ_ELUMP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|186971792|gb|ACC98777.1| DNA ligase, NAD-dependent [Elusimicrobium minutum Pei191] Length = 656 Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+E L +H YY LD+ +D YD + RL L+ P+ D P Sbjct: 2 DKIKKEIEDLRSKINYHNNLYYNLDNAEISDAEYDGLYARLKFLEAMNPDYADAASPTQK 61 Query: 117 VG 118 +G Sbjct: 62 IG 63 >gi|227832930|ref|YP_002834637.1| DNA ligase [Corynebacterium aurimucosum ATCC 700975] gi|262182581|ref|ZP_06042002.1| NAD-dependent DNA ligase LigA [Corynebacterium aurimucosum ATCC 700975] gi|254781299|sp|C3PFU5|DNLJ_CORA7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|227453946|gb|ACP32699.1| DNA ligase [Corynebacterium aurimucosum ATCC 700975] Length = 674 Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + E L + H++ YY +P D +D + +RL AL+ + PEL D P V Sbjct: 6 DIQREWSELAQEVRKHRELYY-NGEPSIPDADFDELFQRLLALEAEHPELQTPDSPTQQV 64 Query: 118 G 118 G Sbjct: 65 G 65 >gi|323467080|gb|ADX70767.1| DNA ligase [Lactobacillus helveticus H10] Length = 689 Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 34/82 (41%) Query: 37 NKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSER 96 NK + ++ K+ ++ EA E L YY D P D +YD+ R Sbjct: 8 NKDKNKKIFNQEVKMAKITLDEAKKEAASLRTKLDEWADAYYSKDAPEVEDNVYDQSYNR 67 Query: 97 LDALQEQFPELFDEDHPWNTVG 118 L L++ FPE+ D VG Sbjct: 68 LLELEKAFPEIVTPDSITQRVG 89 >gi|260102794|ref|ZP_05753031.1| DNA ligase [Lactobacillus helveticus DSM 20075] gi|260083398|gb|EEW67518.1| DNA ligase [Lactobacillus helveticus DSM 20075] Length = 689 Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 34/82 (41%) Query: 37 NKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSER 96 NK + ++ K+ ++ EA E L YY D P D +YD+ R Sbjct: 8 NKDKNKKIFNQEVKMAKITLDEAKKEAASLRTKLDEWADAYYSKDAPEVEDNVYDQSYNR 67 Query: 97 LDALQEQFPELFDEDHPWNTVG 118 L L++ FPE+ D VG Sbjct: 68 LLELEKAFPEIVTPDSITQRVG 89 >gi|7674019|sp|Q9ZHI0|DNLJ_THEFI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+]; AltName: Full=Tfi DNA ligase Length = 670 Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ EA + L + +H YY L DP +D YDR+ L L+E+FPE D P Sbjct: 1 MTREEARRRINELRDLIRYHNYRYYVLADPEISDAEYDRLLRELKELEERFPEFKSPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TEQVG 65 >gi|258648381|ref|ZP_05735850.1| DNA ligase, NAD-dependent [Prevotella tannerae ATCC 51259] gi|260851551|gb|EEX71420.1| DNA ligase, NAD-dependent [Prevotella tannerae ATCC 51259] Length = 677 Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++L K H YY ++P D +D + + L L+++ PE D + P VG Sbjct: 8 KDRIDFLRKELHRHNYNYYVKNNPEILDADFDALMQELADLEQKHPEWADNNSPTVRVG 66 >gi|330685564|gb|EGG97210.1| DNA ligase (NAD+) [Staphylococcus epidermidis VCU121] Length = 668 Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + V+ L + + YY D+P D YD++ L ++E+ PE D P Sbjct: 2 SQLQNRVDELHDLLNQYSYEYYVQDNPSVPDSEYDKLLHELIHIEEEHPEFKTPDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|300813135|ref|ZP_07093512.1| DNA ligase (NAD(+)) [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300495889|gb|EFK31034.1| DNA ligase (NAD(+)) [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 671 Score = 83.8 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 28/64 (43%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S EA EV L K YY D P+ D +YD+ RL L+ +PEL D Sbjct: 4 SLEEAKQEVRQLRAQLDQWAKAYYEQDAPVVEDHVYDKKYARLLELEAAYPELKSADSIT 63 Query: 115 NTVG 118 VG Sbjct: 64 QRVG 67 >gi|153806306|ref|ZP_01958974.1| hypothetical protein BACCAC_00565 [Bacteroides caccae ATCC 43185] gi|149130983|gb|EDM22189.1| hypothetical protein BACCAC_00565 [Bacteroides caccae ATCC 43185] Length = 666 Score = 83.8 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++E L H YY L+ P +D +D L L++ PE DE+ P V Sbjct: 2 DIKEKIEGLRAELHRHNYNYYVLNAPEISDKEFDEKIRELQDLEQAHPEYKDENSPTMRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|170739961|ref|YP_001768616.1| DNA ligase, NAD-dependent [Methylobacterium sp. 4-46] gi|254781369|sp|B0UQ51|DNLJ_METS4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|168194235|gb|ACA16182.1| DNA ligase, NAD-dependent [Methylobacterium sp. 4-46] Length = 827 Score = 83.8 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 35/72 (48%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 + V ++ EA E L H + Y+ D P+ +D YD + RL+A++E+FP+ Sbjct: 5 TTRPVEEITAEEARAAHEALSAEIAEHDRRYHGEDAPIISDAAYDSLRRRLEAIEERFPD 64 Query: 107 LFDEDHPWNTVG 118 L +VG Sbjct: 65 LAGTGAASASVG 76 >gi|72383117|ref|YP_292472.1| NAD-dependent DNA ligase [Prochlorococcus marinus str. NATL2A] gi|123746237|sp|Q46IA9|DNLJ_PROMT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|72002967|gb|AAZ58769.1| NAD-dependent DNA ligase [Prochlorococcus marinus str. NATL2A] Length = 690 Score = 83.8 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 25/58 (43%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + YY LD P D +YD++ L ++ P L +D P +G Sbjct: 10 ERIKELRALLNKANYSYYVLDSPEIDDSVYDQLYRELIEIENIHPSLITDDSPSQRLG 67 >gi|313904335|ref|ZP_07837713.1| DNA ligase, NAD-dependent [Eubacterium cellulosolvens 6] gi|313470885|gb|EFR66209.1| DNA ligase, NAD-dependent [Eubacterium cellulosolvens 6] Length = 670 Score = 83.4 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L + +H YY LD+P +D YD++ L +++ P+ D P +G Sbjct: 4 EEYNRLKEKIDYHMDRYYNLDEPEISDYEYDQLMIALKKAEKEHPDWISPDSPSQKIG 61 >gi|330837729|ref|YP_004412370.1| DNA ligase [Spirochaeta coccoides DSM 17374] gi|329749632|gb|AEC02988.1| DNA ligase [Spirochaeta coccoides DSM 17374] Length = 716 Score = 83.4 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 32/64 (50%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 ++ A+ + L +I L Q YY L P +D YD + + L AL+ P++ + D P Sbjct: 3 TQETAVRRMAELSRILLDAQHEYYVLGRPSMSDKEYDTLMDELAALEAAHPDVKEADSPT 62 Query: 115 NTVG 118 VG Sbjct: 63 QRVG 66 >gi|319902123|ref|YP_004161851.1| DNA ligase, NAD-dependent [Bacteroides helcogenes P 36-108] gi|319417154|gb|ADV44265.1| DNA ligase, NAD-dependent [Bacteroides helcogenes P 36-108] Length = 665 Score = 83.4 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A +++ L H YY L+ P +D +D + L L++++PE D P VG Sbjct: 3 AKEKIDQLRADLHRHNYNYYVLNAPEISDKEFDSMMRDLQNLEKEYPEYQDNSSPTMRVG 62 >gi|170781460|ref|YP_001709792.1| NAD-dependent DNA ligase LigA [Clavibacter michiganensis subsp. sepedonicus] gi|190359244|sp|B0RGA7|DNLJ_CLAMS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|169156028|emb|CAQ01163.1| DNA ligase [Clavibacter michiganensis subsp. sepedonicus] Length = 847 Score = 83.4 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 26/64 (40%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 A V+ L H+ YY +D YD + L A+++ P L +D P Sbjct: 22 DLEAASARVDELRAEIERHRDAYYGETGGTVSDAEYDALERELRAIEDAHPTLRSQDSPT 81 Query: 115 NTVG 118 TVG Sbjct: 82 QTVG 85 >gi|227512904|ref|ZP_03942953.1| NAD-dependent DNA ligase [Lactobacillus buchneri ATCC 11577] gi|227083904|gb|EEI19216.1| NAD-dependent DNA ligase [Lactobacillus buchneri ATCC 11577] Length = 675 Score = 83.4 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 29/67 (43%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 +++ +A L + YY D P D +YD+ ++L L+ FP++ D Sbjct: 4 EDMTEQQAESAARELREKLNKWADEYYTYDSPSVEDSVYDQTYQQLVDLETTFPQIVTPD 63 Query: 112 HPWNTVG 118 P VG Sbjct: 64 SPTQKVG 70 >gi|218281363|ref|ZP_03487841.1| hypothetical protein EUBIFOR_00406 [Eubacterium biforme DSM 3989] gi|218217455|gb|EEC90993.1| hypothetical protein EUBIFOR_00406 [Eubacterium biforme DSM 3989] Length = 667 Score = 83.4 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 33/64 (51%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S + + L K + YY D+P TD YDR+ + L AL+E++PE++D P Sbjct: 1 MSMMDEKARILELRKELEKYSIEYYVYDNPSITDQEYDRLMQELMALEEKYPEMYDATSP 60 Query: 114 WNTV 117 + Sbjct: 61 SQRI 64 >gi|227523032|ref|ZP_03953081.1| NAD-dependent DNA ligase [Lactobacillus hilgardii ATCC 8290] gi|227089850|gb|EEI25162.1| NAD-dependent DNA ligase [Lactobacillus hilgardii ATCC 8290] Length = 675 Score = 83.4 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 29/67 (43%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 +++ +A L + YY D P D +YD+ ++L L+ FP++ D Sbjct: 4 EDMTEQQAESAARELREKLNKWADEYYTYDSPSVEDSVYDQTYQQLVDLETTFPQIVTPD 63 Query: 112 HPWNTVG 118 P VG Sbjct: 64 SPTQKVG 70 >gi|226356158|ref|YP_002785898.1| DNA ligase (NAD(+)) [Deinococcus deserti VCD115] gi|254778151|sp|C1CVC7|DNLJ2_DEIDV RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 2 gi|226318148|gb|ACO46144.1| putative DNA ligase (NAD(+)) [Deinococcus deserti VCD115] Length = 686 Score = 83.4 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 26/58 (44%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L H + YY D P +D YD ++ L ++ + PE ++D P T+G Sbjct: 11 ARYLALRAEVARHNRAYYEQDAPEISDDEYDALARALRDMEARHPEWVEDDSPVQTIG 68 >gi|326334401|ref|ZP_08200613.1| NAD-dependent DNA ligase LigA [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693368|gb|EGD35295.1| NAD-dependent DNA ligase LigA [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 670 Score = 83.4 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 29/60 (48%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + ++E L H YY LD P +D +D+ + L L+ Q+P+ D + P VG Sbjct: 5 VLQQIETLRTELNEHNYNYYVLDSPTISDYEFDQKLKHLQELEHQYPQYKDPNSPTVRVG 64 >gi|47169437|pdb|1V9P|A Chain A, Crystal Structure Of Nad+-Dependent Dna Ligase gi|47169438|pdb|1V9P|B Chain B, Crystal Structure Of Nad+-Dependent Dna Ligase Length = 584 Score = 83.4 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ EA + L + +H YY L DP +D YDR+ L L+E+FPE D P Sbjct: 1 MTREEARRRINELRDLIRYHNYRYYVLADPEISDAEYDRLLRELKELEERFPEFKSPDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TEQVG 65 >gi|303258051|ref|ZP_07344059.1| DNA ligase, NAD-dependent [Burkholderiales bacterium 1_1_47] gi|331000674|ref|ZP_08324326.1| DNA ligase [Parasutterella excrementihominis YIT 11859] gi|302859070|gb|EFL82153.1| DNA ligase, NAD-dependent [Burkholderiales bacterium 1_1_47] gi|329570827|gb|EGG52542.1| DNA ligase [Parasutterella excrementihominis YIT 11859] Length = 684 Score = 83.4 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 29/67 (43%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + +E L + H K YY + P +D +YD + + L L++++P+ Sbjct: 5 DKKKLEAVKLRMEKLAEELEKHNKAYYIDNAPTVSDEIYDSLFQELARLEKEYPQFKSPV 64 Query: 112 HPWNTVG 118 P VG Sbjct: 65 SPTERVG 71 >gi|24379931|ref|NP_721886.1| NAD-dependent DNA ligase LigA [Streptococcus mutans UA159] gi|81451132|sp|Q8DT49|DNLJ_STRMU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|24377912|gb|AAN59192.1|AE014986_3 DNA ligase [Streptococcus mutans UA159] Length = 652 Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV++ + + YY D+P +D YD++ L L+++FPE + P + VG Sbjct: 2 KERMNELVQLLNQYAREYYTKDNPSVSDAEYDKLYRELVELEKEFPEDILPNSPTHRVG 60 >gi|227889453|ref|ZP_04007258.1| NAD-dependent DNA ligase [Lactobacillus johnsonii ATCC 33200] gi|227849931|gb|EEJ60017.1| NAD-dependent DNA ligase [Lactobacillus johnsonii ATCC 33200] Length = 668 Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ EA +V+ L K YY D P+ D +YD+ + L L+++FP+L D Sbjct: 4 LTHSEASQKVDELRKKLDKWADDYYAKDAPVVEDAVYDKTYQELVELEQKFPDLVTADSI 63 Query: 114 WNTVG 118 VG Sbjct: 64 TQRVG 68 >gi|268319976|ref|YP_003293632.1| DNA ligase, NAD-dependent [Lactobacillus johnsonii FI9785] gi|262398351|emb|CAX67365.1| DNA ligase, NAD-dependent [Lactobacillus johnsonii FI9785] Length = 668 Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ EA +V+ L K YY D P+ D +YD+ + L L+++FP+L D Sbjct: 4 LTHSEASQKVDELRKKLDKWADDYYAKDAPVVEDAVYDKTYQELVELEQKFPDLVTADSI 63 Query: 114 WNTVG 118 VG Sbjct: 64 TQRVG 68 >gi|104773603|ref|YP_618583.1| NAD-dependent DNA ligase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|122984006|sp|Q1GBF7|DNLJ_LACDA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|103422684|emb|CAI97297.1| NAD-dependent DNA ligase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 671 Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 27/64 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S EA EV L K YY D P+ D +YD RL L+ +PEL D Sbjct: 4 SLEEAKQEVRQLRAQLDQWAKAYYEQDAPVVEDHVYDEKYARLLELEAAYPELKSADSIT 63 Query: 115 NTVG 118 VG Sbjct: 64 QRVG 67 >gi|94988258|ref|YP_596359.1| NAD-dependent DNA ligase LigA [Streptococcus pyogenes MGAS9429] gi|94992132|ref|YP_600231.1| NAD-dependent DNA ligase LigA [Streptococcus pyogenes MGAS2096] gi|122986939|sp|Q1JCM1|DNLJ_STRPB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|123080420|sp|Q1JMJ7|DNLJ_STRPC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|94541766|gb|ABF31815.1| NAD-dependent DNA ligase [Streptococcus pyogenes MGAS9429] gi|94545640|gb|ABF35687.1| NAD-dependent DNA ligase [Streptococcus pyogenes MGAS2096] Length = 652 Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + ++ YY D P +D YD++ L L++ +PE +D P VG Sbjct: 2 KKRIKELTDLLNRYRYDYYTKDAPSVSDSDYDKLYRELVTLEQSYPEYVLQDSPTQQVG 60 >gi|306827641|ref|ZP_07460921.1| NAD-dependent DNA ligase LigA [Streptococcus pyogenes ATCC 10782] gi|304430204|gb|EFM33233.1| NAD-dependent DNA ligase LigA [Streptococcus pyogenes ATCC 10782] Length = 652 Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + ++ YY D P +D YD++ L L++ +PE +D P VG Sbjct: 2 KKRIKELTDLLNRYRYDYYTKDAPSVSDSDYDKLYRELVTLEQSYPEYVLQDSPTQQVG 60 >gi|298208451|ref|YP_003716630.1| DNA ligase [Croceibacter atlanticus HTCC2559] gi|83848374|gb|EAP86243.1| DNA ligase [Croceibacter atlanticus HTCC2559] Length = 664 Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L + H YY LD P +D +D+ ++L L+ + PE +D + P VG Sbjct: 3 VKDQIQQLREELRQHNYNYYVLDKPEISDYDFDQKLKQLQDLETENPEFYDANSPTLRVG 62 >gi|116071920|ref|ZP_01469188.1| DNA ligase [Synechococcus sp. BL107] gi|116065543|gb|EAU71301.1| DNA ligase [Synechococcus sp. BL107] Length = 682 Score = 83.4 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + E E+ L+ A H YY LD P D +YDR+ L L++ P L D P Sbjct: 3 DQSERASELRNLLNTAAH---AYYVLDTPTMEDAVYDRLYRELLELEQTTPSLKTADSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QRVG 63 >gi|198283038|ref|YP_002219359.1| NAD-dependent DNA ligase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666742|ref|YP_002425245.1| DNA ligase, NAD-dependent [Acidithiobacillus ferrooxidans ATCC 23270] gi|254781244|sp|B7J653|DNLJ_ACIF2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781245|sp|B5EP61|DNLJ_ACIF5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|198247559|gb|ACH83152.1| DNA ligase, NAD-dependent [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518955|gb|ACK79541.1| DNA ligase, NAD-dependent [Acidithiobacillus ferrooxidans ATCC 23270] Length = 671 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 24/58 (41%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + YYR D P +D YD L L+++ P+ D P VG Sbjct: 10 ERIQQLRAELVAANNAYYREDSPTLSDAEYDARLRELRTLEDRNPQWQSADSPTQRVG 67 >gi|309805852|ref|ZP_07699887.1| NAD-dependent DNA ligase adenylation domain protein [Lactobacillus iners LactinV 03V1-b] gi|308167761|gb|EFO69905.1| NAD-dependent DNA ligase adenylation domain protein [Lactobacillus iners LactinV 03V1-b] Length = 109 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 35/67 (52%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + LS +A +EV L K YY D P+ D +YD+V ++L L++++P L D D Sbjct: 2 SELSLAQAKLEVLKLRKQLDSWAYAYYVQDAPVVEDNIYDQVYQQLLELEQKYPVLIDPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|300781381|ref|ZP_07091235.1| NAD-dependent DNA ligase LigA [Corynebacterium genitalium ATCC 33030] gi|300533088|gb|EFK54149.1| NAD-dependent DNA ligase LigA [Corynebacterium genitalium ATCC 33030] Length = 674 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 54 LSKGEA----MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 +++ + + + L K H+ YY D P+ TD +D + RL L+E PEL Sbjct: 1 MTEAQVSEDLLRQWNELAKEVRRHRDLYYNGD-PVITDAEFDEMFRRLQQLEEDHPELAV 59 Query: 110 EDHPWNTVG 118 D P VG Sbjct: 60 PDSPTKEVG 68 >gi|21910027|ref|NP_664295.1| NAD-dependent DNA ligase LigA [Streptococcus pyogenes MGAS315] gi|28896275|ref|NP_802625.1| NAD-dependent DNA ligase LigA [Streptococcus pyogenes SSI-1] gi|81759290|sp|Q8K831|DNLJ_STRP3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|21904217|gb|AAM79098.1| putative DNA ligase [Streptococcus pyogenes MGAS315] gi|28811526|dbj|BAC64458.1| putative DNA ligase [Streptococcus pyogenes SSI-1] Length = 652 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + ++ YY D P +D YD++ L L++ +PE +D P VG Sbjct: 2 KKRIKELTDLLNRYRYDYYTKDAPSVSDSDYDKLYRELVTLEQSYPEYVLQDSPTQQVG 60 >gi|94994051|ref|YP_602149.1| NAD-dependent DNA ligase LigA [Streptococcus pyogenes MGAS10750] gi|123257616|sp|Q1J7G9|DNLJ_STRPF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|94547559|gb|ABF37605.1| NAD-dependent DNA ligase [Streptococcus pyogenes MGAS10750] Length = 652 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + ++ YY D P +D YD++ L L++ +PE +D P VG Sbjct: 2 KKRIKELTDLLNRYRYDYYTKDAPSVSDSDYDKLYRELVTLEQSYPEYVLQDSPTQQVG 60 >gi|71903217|ref|YP_280020.1| NAD-dependent DNA ligase LigA [Streptococcus pyogenes MGAS6180] gi|123761437|sp|Q48UE1|DNLJ_STRPM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|71802312|gb|AAX71665.1| NAD-dependent DNA ligase [Streptococcus pyogenes MGAS6180] Length = 652 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + ++ YY D P +D YD++ L L++ +PE +D P VG Sbjct: 2 KKRIKELTDLLNRYRYDYYTKDAPSVSDSDYDKLYRELVTLEQSYPEYVLQDSPTQQVG 60 >gi|51473890|ref|YP_067647.1| NAD-dependent DNA ligase LigA [Rickettsia typhi str. Wilmington] gi|81389976|sp|Q68W27|DNLJ_RICTY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|51460202|gb|AAU04165.1| DNA joinase [Rickettsia typhi str. Wilmington] Length = 693 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 + + +S+ EA +E L + YY D+PL +D YD++ L+ FP L Sbjct: 2 QNIDLISEKEAKKLLEELADKIAMYNHAYYIEDNPLVSDSEYDQLFNLNLKLENTFPHLV 61 Query: 109 DEDHPWNTVG 118 + P +G Sbjct: 62 LSNSPSKKIG 71 >gi|50913936|ref|YP_059908.1| NAD-dependent DNA ligase LigA [Streptococcus pyogenes MGAS10394] gi|81372213|sp|Q5XCY8|DNLJ_STRP6 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|50903010|gb|AAT86725.1| NAD-dependent DNA ligase [Streptococcus pyogenes MGAS10394] Length = 652 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + ++ YY D P +D YD++ L L++ +PE +D P VG Sbjct: 2 KKRIKELTDLLNRYRYDYYTKDAPSVSDSDYDKLYRELVTLEQSYPEYVLQDSPTQQVG 60 >gi|325684644|gb|EGD26799.1| NAD-dependent DNA ligase LigA [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 671 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 27/64 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S EA EV L K YY D P+ D +YD RL L+ +PEL D Sbjct: 4 SLEEAKQEVRQLRAQLDQWAKAYYEQDAPVVEDHVYDEKYARLLELEAAYPELKSADSIT 63 Query: 115 NTVG 118 VG Sbjct: 64 QRVG 67 >gi|209559128|ref|YP_002285600.1| NAD-dependent DNA ligase LigA [Streptococcus pyogenes NZ131] gi|254781429|sp|B5XKP3|DNLJ_STRPZ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|209540329|gb|ACI60905.1| DNA ligase [Streptococcus pyogenes NZ131] Length = 652 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + ++ YY D P +D YD++ L L++ +PE +D P VG Sbjct: 2 KKRIKELTDLLNRYRYDYYTKDAPSVSDSDYDKLYRELVTLEQSYPEYVLQDSPTQQVG 60 >gi|15674800|ref|NP_268974.1| NAD-dependent DNA ligase LigA [Streptococcus pyogenes M1 GAS] gi|71910386|ref|YP_281936.1| NAD-dependent DNA ligase LigA [Streptococcus pyogenes MGAS5005] gi|81533831|sp|Q9A0J5|DNLJ_STRP1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|13621930|gb|AAK33695.1| putative DNA ligase [Streptococcus pyogenes M1 GAS] gi|71853168|gb|AAZ51191.1| NAD-dependent DNA ligase [Streptococcus pyogenes MGAS5005] Length = 652 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + ++ YY D P +D YD++ L L++ +PE +D P VG Sbjct: 2 KKRIKELTDLLNRYRYDYYTKDAPSVSDSDYDKLYRELVTLEQSYPEYVLQDSPTQQVG 60 >gi|19745839|ref|NP_606975.1| NAD-dependent DNA ligase LigA [Streptococcus pyogenes MGAS8232] gi|94990137|ref|YP_598237.1| NAD-dependent DNA ligase LigA [Streptococcus pyogenes MGAS10270] gi|139474058|ref|YP_001128774.1| NAD-dependent DNA ligase LigA [Streptococcus pyogenes str. Manfredo] gi|81632934|sp|Q8P1L1|DNLJ_STRP8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|123258039|sp|Q1JHP3|DNLJ_STRPD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166216247|sp|A2RFD0|DNLJ_STRPG RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|19747987|gb|AAL97474.1| putative DNA ligase [Streptococcus pyogenes MGAS8232] gi|94543645|gb|ABF33693.1| NAD-dependent DNA ligase [Streptococcus pyogenes MGAS10270] gi|134272305|emb|CAM30559.1| DNA ligase [Streptococcus pyogenes str. Manfredo] Length = 652 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + ++ YY D P +D YD++ L L++ +PE +D P VG Sbjct: 2 KKRIKELTDLLNRYRYDYYTKDAPSVSDSDYDKLYRELVTLEQSYPEYVLQDSPTQQVG 60 >gi|330752433|emb|CBL87383.1| DNA ligase [uncultured Flavobacteria bacterium] Length = 663 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 26/54 (48%) Query: 65 YLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L H YY LD P +D +D ++L L+ Q+PEL D + P VG Sbjct: 9 QLRNELRKHNHNYYVLDTPTISDFEFDIKLKKLQVLESQYPELSDPNSPTMRVG 62 >gi|87123447|ref|ZP_01079298.1| BRCT domain:NAD-dependent DNA ligase N-terminus [Synechococcus sp. RS9917] gi|86169167|gb|EAQ70423.1| BRCT domain:NAD-dependent DNA ligase N-terminus [Synechococcus sp. RS9917] Length = 694 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 23/58 (39%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + YY LD P D +YDR+ L L++ P L D P VG Sbjct: 7 ERARELRTLLNRAAHAYYVLDAPEMEDPVYDRLYRELVELEQADPSLCSPDSPTQRVG 64 >gi|117926963|ref|YP_867580.1| Fis family transcriptional regulator [Magnetococcus sp. MC-1] gi|166215818|sp|A0LDY1|DNLJ_MAGSM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|117610719|gb|ABK46174.1| transcriptional regulator, Fis family [Magnetococcus sp. MC-1] Length = 768 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L K H+ Y+ LD L +D YDR+ L +L+ P L D P + VG Sbjct: 2 SASRAAELRKRLNHYAHSYHTLDTSLVSDAEYDRLFRELQSLEAADPTLISADSPTHRVG 61 >gi|325283108|ref|YP_004255649.1| DNA ligase [Deinococcus proteolyticus MRP] gi|324314917|gb|ADY26032.1| DNA ligase [Deinococcus proteolyticus MRP] Length = 676 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 23/54 (42%) Query: 65 YLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L H + YY D+P D YD ++ ++ A + + PE P VG Sbjct: 15 RLRAELERHNRAYYEQDNPEIPDDEYDALARQVRAAEAEHPEWAAAGSPTERVG 68 >gi|33866919|ref|NP_898478.1| NAD-dependent DNA ligase LigA [Synechococcus sp. WH 8102] gi|81573701|sp|Q7U3P1|DNLJ_SYNPX RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|33639520|emb|CAE08904.1| Putative DNA ligase [Synechococcus sp. WH 8102] Length = 679 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 25/62 (40%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E L + YY LD P+ D LYDR+ L L++ P L D P Sbjct: 2 AEQQQRAAELRSLLNRAAHAYYVLDAPVMEDTLYDRLYRELQQLEQADPSLLSADSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|313123177|ref|YP_004033436.1| DNA ligase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279740|gb|ADQ60459.1| DNA ligase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 671 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 27/64 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S EA EV L K YY D P+ D +YD RL L+ +PEL D Sbjct: 4 SLEEAKQEVRQLRAQLDQWAKAYYEQDAPVVEDHVYDEKYARLLELEAAYPELKSADSIT 63 Query: 115 NTVG 118 VG Sbjct: 64 QRVG 67 >gi|120434999|ref|YP_860685.1| DNA ligase [Gramella forsetii KT0803] gi|166215777|sp|A0LZ23|DNLJ_GRAFK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|117577149|emb|CAL65618.1| DNA ligase [Gramella forsetii KT0803] Length = 664 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 30/61 (49%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E ++ L + H YY LD P +D +D + L L+E++PE D++ P V Sbjct: 2 EVEKKIRGLREELQQHNYNYYVLDKPQISDYEFDIKLKELQELEEKYPEFEDDNSPTRRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|329767007|ref|ZP_08258535.1| DNA ligase [Gemella haemolysans M341] gi|328837732|gb|EGF87357.1| DNA ligase [Gemella haemolysans M341] Length = 663 Score = 82.6 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 31/62 (50%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ LV + + YY D+P +D YD + ++L+ L+E PE E+ P Sbjct: 2 KQVQEKISKLVSLLNKYSYDYYVEDNPQISDTEYDTLYKQLEKLEENHPEYILENSPTQR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|32476578|ref|NP_869572.1| DNA ligase [Rhodopirellula baltica SH 1] gi|81659473|sp|Q7UKD1|DNLJ_RHOBA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|32447124|emb|CAD76950.1| DNA ligase [Rhodopirellula baltica SH 1] Length = 706 Score = 82.6 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V+ LV H + YY P TD YD++ L L+ P+L D P VG Sbjct: 12 IASRVQQLVDEINRHNRLYYDDAAPEITDLQYDQLLAELTQLENDHPDLRRPDSPTQLVG 71 >gi|15807063|ref|NP_295792.1| DNA ligase [Deinococcus radiodurans R1] gi|81550876|sp|Q9RSQ5|DNLJ_DEIRA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|6459863|gb|AAF11619.1|AE002043_4 DNA ligase [Deinococcus radiodurans R1] Length = 700 Score = 82.6 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 24/59 (40%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L H + YY D P D YDR++ L L+ PE D+ P TVG Sbjct: 15 RARYLALRDEVALHNRAYYEQDAPTIPDDEYDRLARELRELEAAHPEFADDHSPVQTVG 73 >gi|227509971|ref|ZP_03940020.1| NAD-dependent DNA ligase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190577|gb|EEI70644.1| NAD-dependent DNA ligase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 675 Score = 82.6 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 +++ +A + L + YY D P D +YD+ ++L L+ FP++ D Sbjct: 4 EDMTEQQAESAAQELREKLNKWADEYYTYDSPSVEDSVYDQTYQQLVDLETTFPQIVTPD 63 Query: 112 HPWNTVG 118 P VG Sbjct: 64 SPTQKVG 70 >gi|188584367|ref|YP_001927812.1| DNA ligase, NAD-dependent [Methylobacterium populi BJ001] gi|254781367|sp|B1Z9P1|DNLJ_METPB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|179347865|gb|ACB83277.1| DNA ligase, NAD-dependent [Methylobacterium populi BJ001] Length = 814 Score = 82.6 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 30/71 (42%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + V SLS+ A L + YY D P TD YD + + L+A++ +FP L Sbjct: 7 SAAVESLSEDAAQARHAELSRAIERANHLYYNEDAPELTDAEYDALRQELEAIEARFPAL 66 Query: 108 FDEDHPWNTVG 118 VG Sbjct: 67 TGTTEASAGVG 77 >gi|126661836|ref|ZP_01732835.1| DNA ligase [Flavobacteria bacterium BAL38] gi|126625215|gb|EAZ95904.1| DNA ligase [Flavobacteria bacterium BAL38] Length = 663 Score = 82.6 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 32/56 (57%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + H YY LD+P+ +D +D+ ++L L+ Q P+ FDE+ P VG Sbjct: 7 IKNLREELNQHNYNYYVLDNPIISDFEFDQKLKQLQDLEIQNPDFFDENSPTQRVG 62 >gi|224476961|ref|YP_002634567.1| DNA ligase [Staphylococcus carnosus subsp. carnosus TM300] gi|254781419|sp|B9DMU3|DNLJ_STACT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|222421568|emb|CAL28382.1| DNA ligase [Staphylococcus carnosus subsp. carnosus TM300] Length = 668 Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E V+ L + + YY D+P D YD++ L ++ PE ED P Sbjct: 2 AELATRVQELHHLLNKYSHEYYVQDNPSVPDSEYDKLLRELIDIENAHPEYKTEDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|154498024|ref|ZP_02036402.1| hypothetical protein BACCAP_02004 [Bacteroides capillosus ATCC 29799] gi|150273014|gb|EDN00171.1| hypothetical protein BACCAP_02004 [Bacteroides capillosus ATCC 29799] Length = 664 Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + E+ L YY LD+P +D +D RL+ L++ P+ ED P VG Sbjct: 4 IQEIALLRAELNKASYEYYVLDNPTMSDYDFDHKLRRLEELEQAHPDQITEDSPTRRVG 62 >gi|297717812|gb|ADI50049.1| DNA ligase [Candidatus Odyssella thessalonicensis L13] Length = 676 Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L K +H + Y++ D P +D YD + R ++ FP+L ED P VG Sbjct: 1 LAKTIAYHDELYFQKDMPQISDAAYDALVVRNRQIENLFPDLRREDSPSKRVG 53 >gi|256824829|ref|YP_003148789.1| DNA ligase, NAD-dependent [Kytococcus sedentarius DSM 20547] gi|256688222|gb|ACV06024.1| DNA ligase, NAD-dependent [Kytococcus sedentarius DSM 20547] Length = 770 Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 1/73 (1%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 D A+ + + + L + H+ YY L P +D +D + L+ L+ + P Sbjct: 26 DAAQNTPDVPDEGVRHQWDDLARRVREHRFAYY-LGRPTISDADFDALFRELEQLESEHP 84 Query: 106 ELFDEDHPWNTVG 118 L + P VG Sbjct: 85 GLRTPESPTQEVG 97 >gi|306835907|ref|ZP_07468900.1| NAD-dependent DNA ligase LigA [Corynebacterium accolens ATCC 49726] gi|304568181|gb|EFM43753.1| NAD-dependent DNA ligase LigA [Corynebacterium accolens ATCC 49726] Length = 689 Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + + E L + H+ YY +P D +D + +RL L++Q PEL D P Sbjct: 6 NPADVQREWNDLAQEVRRHRNLYY-NGEPAIPDADFDALFQRLMDLEKQHPELAVPDSPT 64 Query: 115 NTVG 118 VG Sbjct: 65 QQVG 68 >gi|239995022|ref|ZP_04715546.1| NAD-dependent DNA ligase [Alteromonas macleodii ATCC 27126] Length = 70 Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 33/64 (51%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S +A ++E L + YY +DDP D +YDR + L AL++Q+P L + P Sbjct: 4 SLEQAKQQIETLRNTLNEYNYQYYVMDDPSVPDAVYDRDMQALIALEKQYPTLQSPNSPS 63 Query: 115 NTVG 118 VG Sbjct: 64 QKVG 67 >gi|325956253|ref|YP_004286863.1| DNA ligase [Lactobacillus acidophilus 30SC] gi|325332818|gb|ADZ06726.1| DNA ligase [Lactobacillus acidophilus 30SC] Length = 667 Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 28/67 (41%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ EA E L YY D P D +YD+ RL L+++FPE+ D Sbjct: 2 AEITLDEAKKEAASLRTQLNEWADAYYSKDAPEVEDNVYDQSYNRLLELEKEFPEIVTPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|260889570|ref|ZP_05900833.1| DNA ligase, NAD-dependent [Leptotrichia hofstadii F0254] gi|260860981|gb|EEX75481.1| DNA ligase, NAD-dependent [Leptotrichia hofstadii F0254] Length = 702 Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD----- 109 S + + L +H YY D PL +D YD + L L++++PEL Sbjct: 22 SFSDVQEKYAKLRNEIEYHNNLYYNEDKPLISDMEYDALMRELKQLEQKYPELLKNEENG 81 Query: 110 EDHPWNTVG 118 E P +G Sbjct: 82 ESSPTEKIG 90 >gi|257060505|ref|YP_003138393.1| DNA ligase, NAD-dependent [Cyanothece sp. PCC 8802] gi|256590671|gb|ACV01558.1| DNA ligase, NAD-dependent [Cyanothece sp. PCC 8802] Length = 674 Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 24/45 (53%) Query: 74 QKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+P+ D +YD++ L L+ Q+P L D P VG Sbjct: 23 NYAYYVLDNPIMEDSVYDQLYRELQDLESQYPILITPDSPTQRVG 67 >gi|182411830|ref|YP_001816896.1| DNA ligase, NAD-dependent [Opitutus terrae PB90-1] gi|254778148|sp|B1ZWH2|DNLJ1_OPITP RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 1 gi|177839044|gb|ACB73296.1| DNA ligase, NAD-dependent [Opitutus terrae PB90-1] Length = 675 Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 25/65 (38%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ EA + L H + Y+R P D YD + L L+ +P+ P Sbjct: 1 MTPVEAQSRIAELRAQVARHDELYHRRAQPQIGDFEYDALKRELAELEAAWPQFARGASP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TEQVG 65 >gi|315303635|ref|ZP_07874170.1| DNA ligase, NAD-dependent [Listeria ivanovii FSL F6-596] gi|313627998|gb|EFR96596.1| DNA ligase, NAD-dependent [Listeria ivanovii FSL F6-596] Length = 678 Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L+ I + YY +D+P D YD+ + L ++ PE + P N VG Sbjct: 11 KKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLQIEAAHPEWVTPESPSNRVG 69 >gi|222481049|ref|YP_002567286.1| DNA ligase, NAD-dependent [Halorubrum lacusprofundi ATCC 49239] gi|254781342|sp|B9LU22|DNLJ_HALLT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|222453951|gb|ACM58216.1| DNA ligase, NAD-dependent [Halorubrum lacusprofundi ATCC 49239] Length = 710 Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 + V +LS+ EA + L H YY DPL D YDR+ RL L+ +F + Sbjct: 23 DFEPVGALSEDEATEQASLLRAAIREHDHRYYLEADPLIPDETYDRLFTRLQELENEF-D 81 Query: 107 LFDEDHPWNTVG 118 L ++ P VG Sbjct: 82 LPTQNSPTRRVG 93 >gi|161485980|ref|NP_737948.2| NAD-dependent DNA ligase LigA [Corynebacterium efficiens YS-314] gi|259506289|ref|ZP_05749191.1| DNA ligase [Corynebacterium efficiens YS-314] gi|259166069|gb|EEW50623.1| DNA ligase [Corynebacterium efficiens YS-314] Length = 678 Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + L + +H+ YY P D +D + +L L+EQ PEL D P Sbjct: 4 DNAQLRRTWNELAEKVRYHRDLYYNQ-QPEIPDADFDALFRQLQDLEEQHPELAVPDSPT 62 Query: 115 NTVG 118 VG Sbjct: 63 KEVG 66 >gi|260436246|ref|ZP_05790216.1| DNA ligase, NAD-dependent [Synechococcus sp. WH 8109] gi|260414120|gb|EEX07416.1| DNA ligase, NAD-dependent [Synechococcus sp. WH 8109] Length = 680 Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 24/58 (41%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + YY LD P+ D +YDR+ L L++ P L D P VG Sbjct: 6 ERAAELRHLLNRAGHAYYVLDAPVMEDAVYDRLYRELLELEQNDPGLQRPDSPTQRVG 63 >gi|315037778|ref|YP_004031346.1| DNA ligase [Lactobacillus amylovorus GRL 1112] gi|312275911|gb|ADQ58551.1| DNA ligase [Lactobacillus amylovorus GRL 1112] Length = 667 Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 28/67 (41%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ EA E L YY D P D +YD+ RL L+++FPE+ D Sbjct: 2 AEITLDEAKKEAASLRTQLNEWADAYYSKDAPEVEDNVYDQSYNRLLELEKEFPEIVTPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|254420802|ref|ZP_05034526.1| DNA ligase, NAD-dependent [Brevundimonas sp. BAL3] gi|196186979|gb|EDX81955.1| DNA ligase, NAD-dependent [Brevundimonas sp. BAL3] Length = 776 Score = 82.6 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 1/78 (1%) Query: 41 LESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 + S + V L+ A E+ +L H Y P +D YD + R A+ Sbjct: 1 MSSAIPPFPPVEDLTAETAAEELAWLAAEMARHDALY-NEATPEISDADYDALRARNLAI 59 Query: 101 QEQFPELFDEDHPWNTVG 118 + FP+L D P + VG Sbjct: 60 ETAFPDLVRPDSPSHKVG 77 >gi|255324552|ref|ZP_05365669.1| DNA ligase, NAD-dependent [Corynebacterium tuberculostearicum SK141] gi|255298458|gb|EET77758.1| DNA ligase, NAD-dependent [Corynebacterium tuberculostearicum SK141] Length = 689 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L + H+ YY +P D +D + +RL AL+E+ PEL D P VG Sbjct: 12 REWNDLAQEVRRHRNLYY-NGEPAIPDADFDALFQRLLALEEEHPELAVPDSPTQQVG 68 >gi|16800936|ref|NP_471204.1| NAD-dependent DNA ligase LigA [Listeria innocua Clip11262] gi|81526387|sp|Q92AQ0|DNLJ_LISIN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|16414371|emb|CAC97100.1| lin1870 [Listeria innocua Clip11262] Length = 671 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L+ I + YY +D+P D YD+ + L ++E PE + P VG Sbjct: 4 KKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKIEEAHPEWVTPESPSKRVG 62 >gi|184201319|ref|YP_001855526.1| NAD-dependent DNA ligase [Kocuria rhizophila DC2201] gi|254781351|sp|B2GL64|DNLJ_KOCRD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|183581549|dbj|BAG30020.1| NAD(+)-dependent DNA ligase [Kocuria rhizophila DC2201] Length = 766 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 5/83 (6%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 P A L+ + +L E L + YY D P+ +D YD++ Sbjct: 11 PATDANGQSLNPEEPSEAL-----REEYAQLSDRVREARAAYYVHDQPVISDAEYDQLYR 65 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+ + PEL D P VG Sbjct: 66 SLEEFEALHPELKANDSPTQEVG 88 >gi|327183069|gb|AEA31516.1| DNA ligase [Lactobacillus amylovorus GRL 1118] Length = 667 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 28/67 (41%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ EA E L YY D P D +YD+ RL L+++FPE+ D Sbjct: 2 AEITLDEAKKEAASLRTQLNEWADAYYSKDAPEVEDNVYDQSYNRLLELEKEFPEIVTPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|238854176|ref|ZP_04644523.1| DNA ligase, NAD-dependent [Lactobacillus gasseri 202-4] gi|238833252|gb|EEQ25542.1| DNA ligase, NAD-dependent [Lactobacillus gasseri 202-4] Length = 668 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ +A +V+ L K + YY D P+ D +YD+ + L L++QFP+L D Sbjct: 4 LTHNQASQKVDELRKKLDEWAEDYYAKDAPVVEDAVYDKAYQELVELEKQFPDLVTSDSI 63 Query: 114 WNTVG 118 VG Sbjct: 64 TQRVG 68 >gi|116630136|ref|YP_815308.1| NAD-dependent DNA ligase [Lactobacillus gasseri ATCC 33323] gi|122272927|sp|Q041K2|DNLJ_LACGA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116095718|gb|ABJ60870.1| NAD-dependent DNA ligase [Lactobacillus gasseri ATCC 33323] Length = 668 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ +A +V+ L K + YY D P+ D +YD+ + L L++QFP+L D Sbjct: 4 LTHNQASQKVDELRKKLDEWAEDYYAKDAPVVEDAVYDKAYQELVELEKQFPDLVTSDSI 63 Query: 114 WNTVG 118 VG Sbjct: 64 TQRVG 68 >gi|313623350|gb|EFR93577.1| DNA ligase, NAD-dependent [Listeria innocua FSL J1-023] Length = 671 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L+ I + YY +D+P D YD+ + L ++E PE + P VG Sbjct: 4 KKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKIEEAHPEWVTPESPSKRVG 62 >gi|329667842|gb|AEB93790.1| NAD-dependent DNA ligase [Lactobacillus johnsonii DPC 6026] Length = 668 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ EA +V+ L K YY D P+ D +YD+ + L L+EQFP+L + Sbjct: 4 LTHNEASQKVDELRKKLDKWADDYYAKDAPVVEDAVYDKTYQELVELEEQFPDLVTANSI 63 Query: 114 WNTVG 118 VG Sbjct: 64 TQRVG 68 >gi|171779630|ref|ZP_02920586.1| hypothetical protein STRINF_01467 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281732|gb|EDT47166.1| hypothetical protein STRINF_01467 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 652 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV ++K YY D P +D YD++ L L++ P+L D P VG Sbjct: 2 KERIQKLVDELNQYRKEYYTQDQPTVSDSEYDKLYRELVELEKANPDLILPDSPTQAVG 60 >gi|46907988|ref|YP_014377.1| NAD-dependent DNA ligase LigA [Listeria monocytogenes str. 4b F2365] gi|81565576|sp|Q71YR0|DNLJ_LISMF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|46881258|gb|AAT04554.1| DNA ligase, NAD-dependent [Listeria monocytogenes serotype 4b str. F2365] Length = 671 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L+ I + YY +D+P D YD+ + L ++E PE + P VG Sbjct: 4 KKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKIEEAHPEWVTPESPSKRVG 62 >gi|47092911|ref|ZP_00230693.1| DNA ligase, NAD-dependent [Listeria monocytogenes str. 4b H7858] gi|254825997|ref|ZP_05230998.1| DNA ligase [Listeria monocytogenes FSL J1-194] gi|254853668|ref|ZP_05243016.1| DNA ligase [Listeria monocytogenes FSL R2-503] gi|254932796|ref|ZP_05266155.1| DNA ligase [Listeria monocytogenes HPB2262] gi|300765954|ref|ZP_07075926.1| DNA ligase, NAD-dependent [Listeria monocytogenes FSL N1-017] gi|47018737|gb|EAL09488.1| DNA ligase, NAD-dependent [Listeria monocytogenes str. 4b H7858] gi|258607047|gb|EEW19655.1| DNA ligase [Listeria monocytogenes FSL R2-503] gi|293584349|gb|EFF96381.1| DNA ligase [Listeria monocytogenes HPB2262] gi|293595236|gb|EFG02997.1| DNA ligase [Listeria monocytogenes FSL J1-194] gi|300513340|gb|EFK40415.1| DNA ligase, NAD-dependent [Listeria monocytogenes FSL N1-017] gi|328466510|gb|EGF37653.1| NAD-dependent DNA ligase LigA [Listeria monocytogenes 1816] gi|328473899|gb|EGF44721.1| NAD-dependent DNA ligase LigA [Listeria monocytogenes 220] Length = 671 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L+ I + YY +D+P D YD+ + L ++E PE + P VG Sbjct: 4 KKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKIEEAHPEWVTPESPSKRVG 62 >gi|218248171|ref|YP_002373542.1| NAD-dependent DNA ligase [Cyanothece sp. PCC 8801] gi|254781307|sp|B7K0A2|DNLJ_CYAP8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218168649|gb|ACK67386.1| DNA ligase, NAD-dependent [Cyanothece sp. PCC 8801] Length = 674 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 24/45 (53%) Query: 74 QKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+P+ D +YD++ L L+ Q+P L D P VG Sbjct: 23 NYAYYVLDNPIMEDSVYDQLYRELQDLESQYPILITPDSPTQRVG 67 >gi|226224361|ref|YP_002758468.1| DNA ligase [Listeria monocytogenes Clip81459] gi|254781359|sp|C1KW57|DNLJ_LISMC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|225876823|emb|CAS05532.1| Putative DNA ligase [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 671 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L+ I + YY +D+P D YD+ + L ++E PE + P VG Sbjct: 4 KKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKIEEAHPEWVTPESPSKRVG 62 >gi|317477010|ref|ZP_07936252.1| DNA ligase [Bacteroides eggerthii 1_2_48FAA] gi|316906803|gb|EFV28515.1| DNA ligase [Bacteroides eggerthii 1_2_48FAA] Length = 666 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L H YY L+ P +D +D + L L+++ PE DE+ P VG Sbjct: 3 IKERIDQLRTDLHRHNYNYYVLNTPEISDKEFDDMMRELQDLEKEHPEYQDENSPTMRVG 62 >gi|218131107|ref|ZP_03459911.1| hypothetical protein BACEGG_02712 [Bacteroides eggerthii DSM 20697] gi|217986811|gb|EEC53144.1| hypothetical protein BACEGG_02712 [Bacteroides eggerthii DSM 20697] Length = 666 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L H YY L+ P +D +D + L L+++ PE DE+ P VG Sbjct: 3 IKERIDQLRTDLHRHNYNYYVLNTPEISDKEFDDMMRELQDLEKEHPEYQDENSPTMRVG 62 >gi|91216495|ref|ZP_01253461.1| DNA ligase [Psychroflexus torquis ATCC 700755] gi|91185289|gb|EAS71666.1| DNA ligase [Psychroflexus torquis ATCC 700755] Length = 667 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L + H YY LD P +D +D L L++ PE D + P VG Sbjct: 3 IQDQIENLRQELHEHNYKYYVLDAPEISDYDFDMKLNALQELEKTHPEYKDPNSPTMRVG 62 >gi|313637419|gb|EFS02883.1| DNA ligase, NAD-dependent [Listeria seeligeri FSL S4-171] Length = 671 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L+ I + YY +D+P D YD+ + L ++E PE + P VG Sbjct: 4 KKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLQIEEAHPEWVTPESPSKRVG 62 >gi|282851211|ref|ZP_06260576.1| DNA ligase (NAD(+)) [Lactobacillus gasseri 224-1] gi|282557179|gb|EFB62776.1| DNA ligase (NAD(+)) [Lactobacillus gasseri 224-1] Length = 668 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ +A +V+ L K + YY D P+ D +YD+ + L L++QFP+L D Sbjct: 4 LTHNQASQKVDELRKKLDEWAEDYYAKDAPVVEDAVYDKAYQELVELEKQFPDLVTSDSI 63 Query: 114 WNTVG 118 VG Sbjct: 64 TQRVG 68 >gi|290893414|ref|ZP_06556399.1| DNA ligase [Listeria monocytogenes FSL J2-071] gi|290557065|gb|EFD90594.1| DNA ligase [Listeria monocytogenes FSL J2-071] Length = 671 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L+ I + YY +D+P D YD+ + L ++E PE + P VG Sbjct: 4 KKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKIEEAHPEWVTPESPSKRVG 62 >gi|217964094|ref|YP_002349772.1| DNA ligase, NAD-dependent [Listeria monocytogenes HCC23] gi|254781360|sp|B8DFG5|DNLJ_LISMH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|217333364|gb|ACK39158.1| DNA ligase, NAD-dependent [Listeria monocytogenes HCC23] gi|307571338|emb|CAR84517.1| DNA ligase, NAD-dependent [Listeria monocytogenes L99] Length = 671 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L+ I + YY +D+P D YD+ + L ++E PE + P VG Sbjct: 4 KKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKIEEAHPEWVTPESPSKRVG 62 >gi|289422752|ref|ZP_06424592.1| DNA ligase (NAD(+)) [Peptostreptococcus anaerobius 653-L] gi|289156931|gb|EFD05556.1| DNA ligase (NAD(+)) [Peptostreptococcus anaerobius 653-L] Length = 700 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 32/69 (46%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 + SL A V L +H YY D+P +D YDR+ L L++++P+L Sbjct: 19 DIGSLDIDGARDLVGDLTYTLNYHSDSYYNKDNPEISDYQYDRMMRCLIGLEDKYPDLKA 78 Query: 110 EDHPWNTVG 118 D P VG Sbjct: 79 PDSPSVRVG 87 >gi|311740579|ref|ZP_07714406.1| NAD-dependent DNA ligase LigA [Corynebacterium pseudogenitalium ATCC 33035] gi|311304099|gb|EFQ80175.1| NAD-dependent DNA ligase LigA [Corynebacterium pseudogenitalium ATCC 33035] Length = 689 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L + H+ YY +P D +D + +RL AL+E+ PEL D P VG Sbjct: 12 REWNDLAQEVRRHRNLYY-NGEPAIPDADFDALFQRLLALEEEHPELAVPDSPTQQVG 68 >gi|254993539|ref|ZP_05275729.1| NAD-dependent DNA ligase LigA [Listeria monocytogenes FSL J2-064] Length = 665 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L+ I + YY +D+P D YD+ + L ++E PE + P VG Sbjct: 4 KKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKIEEAHPEWVTPESPSKRVG 62 >gi|254829489|ref|ZP_05234176.1| DNA ligase [Listeria monocytogenes FSL N3-165] gi|258601904|gb|EEW15229.1| DNA ligase [Listeria monocytogenes FSL N3-165] Length = 671 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L+ I + YY +D+P D YD+ + L ++E PE + P VG Sbjct: 4 KKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKIEEAHPEWVTPESPSKRVG 62 >gi|255026038|ref|ZP_05298024.1| NAD-dependent DNA ligase LigA [Listeria monocytogenes FSL J2-003] Length = 671 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L+ I + YY +D+P D YD+ + L ++E PE + P VG Sbjct: 4 KKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKIEEAHPEWVTPESPSKRVG 62 >gi|323344237|ref|ZP_08084463.1| NAD-dependent DNA ligase LigA [Prevotella oralis ATCC 33269] gi|323094966|gb|EFZ37541.1| NAD-dependent DNA ligase LigA [Prevotella oralis ATCC 33269] Length = 665 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + H YY L+ P +D +D + L L+ ++P++ D + P VG Sbjct: 4 KQRISELRQQLHEHNYKYYVLNAPTISDQAFDFMMHELQDLEAKYPKMDDPNSPTKRVG 62 >gi|114797923|ref|YP_759116.1| DNA ligase, NAD-dependent [Hyphomonas neptunium ATCC 15444] gi|122942770|sp|Q0C577|DNLJ_HYPNA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|114738097|gb|ABI76222.1| DNA ligase, NAD-dependent [Hyphomonas neptunium ATCC 15444] Length = 701 Score = 81.8 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 25/42 (59%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY+ D P TD YD + +R A++ +FP L ED P + VG Sbjct: 33 YYQNDAPELTDADYDALRQRNLAIEARFPALKREDSPTDRVG 74 >gi|47095684|ref|ZP_00233291.1| DNA ligase, NAD-dependent [Listeria monocytogenes str. 1/2a F6854] gi|254900737|ref|ZP_05260661.1| NAD-dependent DNA ligase LigA [Listeria monocytogenes J0161] gi|254913778|ref|ZP_05263790.1| DNA ligase [Listeria monocytogenes J2818] gi|254938165|ref|ZP_05269862.1| DNA ligase [Listeria monocytogenes F6900] gi|284802202|ref|YP_003414067.1| NAD-dependent DNA ligase LigA [Listeria monocytogenes 08-5578] gi|284995344|ref|YP_003417112.1| NAD-dependent DNA ligase LigA [Listeria monocytogenes 08-5923] gi|47015969|gb|EAL06895.1| DNA ligase, NAD-dependent [Listeria monocytogenes str. 1/2a F6854] gi|258610778|gb|EEW23386.1| DNA ligase [Listeria monocytogenes F6900] gi|284057764|gb|ADB68705.1| NAD-dependent DNA ligase LigA [Listeria monocytogenes 08-5578] gi|284060811|gb|ADB71750.1| NAD-dependent DNA ligase LigA [Listeria monocytogenes 08-5923] gi|293591794|gb|EFG00129.1| DNA ligase [Listeria monocytogenes J2818] Length = 671 Score = 81.8 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L+ I + YY +D+P D YD+ + L ++E PE + P VG Sbjct: 4 KKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKIEEAHPEWVTPESPSKRVG 62 >gi|163788595|ref|ZP_02183040.1| putative DNA ligase [Flavobacteriales bacterium ALC-1] gi|159875832|gb|EDP69891.1| putative DNA ligase [Flavobacteriales bacterium ALC-1] Length = 664 Score = 81.8 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L + H YY LD+ +D +D + L AL+E PE FD + P VG Sbjct: 4 KQKIEILREELRQHNYNYYILDNATISDYEFDIKLKELQALEEANPEFFDPNSPTQRVG 62 >gi|313890529|ref|ZP_07824157.1| DNA ligase (NAD+) [Streptococcus pseudoporcinus SPIN 20026] gi|313121046|gb|EFR44157.1| DNA ligase (NAD+) [Streptococcus pseudoporcinus SPIN 20026] Length = 652 Score = 81.8 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + +++ YY D+P +D YD++ L AL+ ++PEL +D P VG Sbjct: 2 EKRIIELTNLLNQYRQEYYTNDNPTVSDQEYDKLYHELLALETEYPELIQKDSPTQGVG 60 >gi|254832503|ref|ZP_05237158.1| NAD-dependent DNA ligase LigA [Listeria monocytogenes 10403S] Length = 671 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L+ I + YY +D+P D YD+ + L ++E PE + P VG Sbjct: 4 KKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKIEEAHPEWVTPESPSKRVG 62 >gi|16803798|ref|NP_465283.1| NAD-dependent DNA ligase LigA [Listeria monocytogenes EGD-e] gi|224499523|ref|ZP_03667872.1| NAD-dependent DNA ligase LigA [Listeria monocytogenes Finland 1988] gi|224503316|ref|ZP_03671623.1| NAD-dependent DNA ligase LigA [Listeria monocytogenes FSL R2-561] gi|81508669|sp|Q8Y6D0|DNLJ_LISMO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|16411212|emb|CAC99836.1| lmo1758 [Listeria monocytogenes EGD-e] Length = 671 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L+ I + YY +D+P D YD+ + L ++E PE + P VG Sbjct: 4 KKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKIEEAHPEWVTPESPSKRVG 62 >gi|325955534|ref|YP_004239194.1| DNA ligase [Weeksella virosa DSM 16922] gi|323438152|gb|ADX68616.1| DNA ligase [Weeksella virosa DSM 16922] Length = 663 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + H YY LD P +D +D + L L+++ PE D + P VG Sbjct: 4 QQRILALREELHQHNYRYYVLDQPSISDFEFDLKLKELQKLEKEHPEFSDPNSPTVRVG 62 >gi|290580089|ref|YP_003484481.1| DNA ligase [Streptococcus mutans NN2025] gi|254996988|dbj|BAH87589.1| DNA ligase [Streptococcus mutans NN2025] Length = 652 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV++ + + YY D+P +D YD++ L L+++FPE + P + VG Sbjct: 2 KERMNELVQLLNQYAREYYTKDNPSVSDAEYDKLYRELVELEKEFPEDILSNSPTHRVG 60 >gi|289581750|ref|YP_003480216.1| DNA ligase, NAD-dependent [Natrialba magadii ATCC 43099] gi|289531303|gb|ADD05654.1| DNA ligase, NAD-dependent [Natrialba magadii ATCC 43099] Length = 699 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + LS EA +VE L H + YY +DPL D YD + ERL L+ F +L Sbjct: 21 FEPPEQLSDDEAEQQVEQLRDAIREHDRRYYVENDPLIADRTYDTLFERLQVLESTF-DL 79 Query: 108 FDEDHPWNTVG 118 D P +VG Sbjct: 80 SHPDSPTRSVG 90 >gi|332169163|gb|AEE18418.1| DNA ligase, NAD-dependent [Krokinobacter diaphorus 4H-3-7-5] Length = 664 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ E ++ L H YY LD P +D +D+ ++L+AL+ PE D + P Sbjct: 1 MTIEE---QILALRNELQSHNHSYYVLDTPTISDFDFDQKLKQLEALEAAHPEFDDPNSP 57 Query: 114 WNTVG 118 + VG Sbjct: 58 THRVG 62 >gi|297626017|ref|YP_003687780.1| DNA ligase (NAD+) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921782|emb|CBL56340.1| DNA ligase (NAD+) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 764 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LVK Q+ YY D P TD LYD + L L+ ++P L D P VG Sbjct: 29 QRRHAELVKEIDDAQEAYYGRDKPFITDALYDELMLELQKLEAEYPSLRTPDSPTQRVG 87 >gi|300361107|ref|ZP_07057284.1| NAD-dependent DNA ligase LigA [Lactobacillus gasseri JV-V03] gi|300353726|gb|EFJ69597.1| NAD-dependent DNA ligase LigA [Lactobacillus gasseri JV-V03] Length = 668 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ +A +V+ L K + YY D P+ D +YD+ + L L+++FP+L D Sbjct: 4 LTHNQASQKVDELRKKLDEWAEDYYAKDAPIVEDAVYDKAYQELVELEKRFPDLVTSDSI 63 Query: 114 WNTVG 118 VG Sbjct: 64 TQRVG 68 >gi|291166519|gb|EFE28565.1| DNA ligase, NAD-dependent [Filifactor alocis ATCC 35896] Length = 668 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 32/61 (52%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A +++ L + ++ YY+ D P +D YD + + L +L+++ P L + P V Sbjct: 2 DAEKKIKLLRERLEYYSAKYYQEDAPEISDAEYDSMMKELMSLEKEHPSLRSAESPSEKV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|239638039|ref|ZP_04678998.1| DNA ligase, NAD-dependent [Staphylococcus warneri L37603] gi|239596322|gb|EEQ78860.1| DNA ligase, NAD-dependent [Staphylococcus warneri L37603] Length = 668 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 25/62 (40%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E V L + + YY D+P D YD++ L ++ + PE D P Sbjct: 2 SELQNRVNDLHDLLNQYSYEYYVQDNPSVPDSEYDKLLHELIHIESEHPEFKTPDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|225155696|ref|ZP_03724184.1| DNA ligase (NAD(+)) [Opitutaceae bacterium TAV2] gi|224803490|gb|EEG21725.1| DNA ligase (NAD(+)) [Opitutaceae bacterium TAV2] Length = 761 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%) Query: 54 LSKGEA--MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ E + + L H + YYR P +D YDR+ L L+ Q P+L D Sbjct: 1 MTPAEPTPVQRIANLRAELARHDELYYRAARPEISDYDYDRLKRELANLESQHPQLDLGD 60 Query: 112 HPWNTVG 118 P +G Sbjct: 61 SPTLRIG 67 >gi|167763098|ref|ZP_02435225.1| hypothetical protein BACSTE_01465 [Bacteroides stercoris ATCC 43183] gi|167699438|gb|EDS16017.1| hypothetical protein BACSTE_01465 [Bacteroides stercoris ATCC 43183] Length = 665 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L H YY L+ P +D +D L L+++ PE D++ P VG Sbjct: 3 VKEKIDQLRADLHRHNYNYYVLNAPEISDKEFDDRMRELQELEKEHPEYQDDNSPTMRVG 62 >gi|313674932|ref|YP_004052928.1| DNA ligase, nad-dependent [Marivirga tractuosa DSM 4126] gi|312941630|gb|ADR20820.1| DNA ligase, NAD-dependent [Marivirga tractuosa DSM 4126] Length = 671 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K A +++ L + ++ YY+ +D +D + + L L+E+FP+L D P Sbjct: 1 MEKKAAEQKIQELSEKLHYYNYKYYQESVSEISDYEFDMMLKELIELEEKFPDLKTSDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|282919739|ref|ZP_06327471.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus C427] gi|282316377|gb|EFB46754.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus C427] Length = 667 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + V L + + YY D+P D YD++ L ++E+ PE D P Sbjct: 2 ADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEFKTVDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|314934069|ref|ZP_07841432.1| DNA ligase, NAD-dependent [Staphylococcus caprae C87] gi|313653180|gb|EFS16939.1| DNA ligase, NAD-dependent [Staphylococcus caprae C87] Length = 667 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + V L + + YY D+P D YD++ L ++E+ PE D P Sbjct: 2 EDLQSRVNELHDLLNQYSYEYYVQDNPSVPDSEYDKLLHELIDIEEKHPEYKTADSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|257436941|ref|ZP_05612983.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus M876] gi|282914702|ref|ZP_06322487.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus M899] gi|257283730|gb|EEV13855.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus M876] gi|282321416|gb|EFB51742.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus M899] Length = 667 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + V L + + YY D+P D YD++ L ++E+ PE D P Sbjct: 2 ADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEFKTVDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|78185772|ref|YP_378206.1| NAD-dependent DNA ligase LigA [Synechococcus sp. CC9902] gi|123743489|sp|Q3AUH7|DNLJ_SYNS9 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|78170066|gb|ABB27163.1| DNA ligase (NAD+) [Synechococcus sp. CC9902] Length = 680 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + E E+ L+ A H YY LD P D +YDR+ + L L++ P L D P Sbjct: 3 DQSERATELRNLLNTAAH---AYYVLDTPTMEDAVYDRLYQELLELEQNTPSLKTADSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QRVG 63 >gi|49484145|ref|YP_041369.1| DNA ligase [Staphylococcus aureus subsp. aureus MRSA252] gi|257426036|ref|ZP_05602458.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus 55/2053] gi|257428709|ref|ZP_05605104.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus 65-1322] gi|257431319|ref|ZP_05607695.1| DNA ligase [Staphylococcus aureus subsp. aureus 68-397] gi|257434037|ref|ZP_05610388.1| DNA ligase [Staphylococcus aureus subsp. aureus E1410] gi|282904535|ref|ZP_06312420.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus C160] gi|282906308|ref|ZP_06314160.1| DNA ligase [Staphylococcus aureus subsp. aureus Btn1260] gi|282909224|ref|ZP_06317040.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911529|ref|ZP_06319329.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus WBG10049] gi|282925143|ref|ZP_06332803.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus C101] gi|283958665|ref|ZP_06376111.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus A017934/97] gi|293507779|ref|ZP_06667621.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus 58-424] gi|293510281|ref|ZP_06668987.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus M809] gi|293539336|ref|ZP_06672015.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus M1015] gi|295428486|ref|ZP_06821113.1| DNA ligase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590042|ref|ZP_06948682.1| NAD-dependent DNA ligase LigA [Staphylococcus aureus subsp. aureus MN8] gi|81650789|sp|Q6GFF3|DNLJ_STAAR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|49242274|emb|CAG40981.1| DNA ligase [Staphylococcus aureus subsp. aureus MRSA252] gi|257271179|gb|EEV03336.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus 55/2053] gi|257274353|gb|EEV05865.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus 65-1322] gi|257277968|gb|EEV08624.1| DNA ligase [Staphylococcus aureus subsp. aureus 68-397] gi|257280963|gb|EEV11107.1| DNA ligase [Staphylococcus aureus subsp. aureus E1410] gi|282313101|gb|EFB43499.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus C101] gi|282324538|gb|EFB54850.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus WBG10049] gi|282326792|gb|EFB57089.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330505|gb|EFB60022.1| DNA ligase [Staphylococcus aureus subsp. aureus Btn1260] gi|282595091|gb|EFC00058.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus C160] gi|283789705|gb|EFC28527.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus A017934/97] gi|290919871|gb|EFD96940.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus M1015] gi|291094842|gb|EFE25110.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus 58-424] gi|291466645|gb|EFF09165.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus M809] gi|295127468|gb|EFG57107.1| DNA ligase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297577170|gb|EFH95884.1| NAD-dependent DNA ligase LigA [Staphylococcus aureus subsp. aureus MN8] gi|312437629|gb|ADQ76700.1| NAD-dependent DNA ligase LigA [Staphylococcus aureus subsp. aureus TCH60] gi|315193434|gb|EFU23831.1| DNA ligase [Staphylococcus aureus subsp. aureus CGS00] Length = 667 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + V L + + YY D+P D YD++ L ++E+ PE D P Sbjct: 2 ADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEFKTVDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|123774771|sp|Q47SC6|DNLJ_THEFY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|71914739|gb|AAZ54641.1| NAD-dependent DNA ligase [Thermobifida fusca YX] Length = 745 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + L + + YY L P+ +D YD++ L L+ Q+P L D P Sbjct: 27 PADVRERHARLSQDLDDYSYRYY-LGSPIISDAEYDQLMAELRDLEAQYPSLVTPDSPTQ 85 Query: 116 TVG 118 VG Sbjct: 86 KVG 88 >gi|223044011|ref|ZP_03614051.1| DNA ligase, NAD-dependent [Staphylococcus capitis SK14] gi|222442554|gb|EEE48659.1| DNA ligase, NAD-dependent [Staphylococcus capitis SK14] Length = 667 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 25/59 (42%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V L + + YY D+P D YD++ L ++E+ PE D P VG Sbjct: 5 QSRVNELHDLLNQYSYEYYVQDNPSVPDSEYDKLLHELIDIEEKHPEYKTADSPTVRVG 63 >gi|329726878|gb|EGG63336.1| DNA ligase (NAD+) [Staphylococcus epidermidis VCU144] Length = 665 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + V L + + YY D+P D YD++ L ++E++PE D P Sbjct: 2 QDVKKRVGKLHDLLNQYSYEYYVQDNPSVPDNEYDKLLHELIEIEEKYPEFKSTDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|58336856|ref|YP_193441.1| DNA ligase [Lactobacillus acidophilus NCFM] gi|227903415|ref|ZP_04021220.1| DNA ligase [Lactobacillus acidophilus ATCC 4796] gi|75357942|sp|Q5FLL4|DNLJ_LACAC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|58254173|gb|AAV42410.1| DNA ligase [Lactobacillus acidophilus NCFM] gi|227868891|gb|EEJ76312.1| DNA ligase [Lactobacillus acidophilus ATCC 4796] Length = 668 Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 28/67 (41%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ EA E L YY D P D +YD+ RL L++QFPE+ D Sbjct: 2 ADITLDEAKKEASLLRNQLDKWADAYYSKDAPEVEDNVYDQKYSRLLELEKQFPEIVTPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|242371787|ref|ZP_04817361.1| DNA ligase [Staphylococcus epidermidis M23864:W1] gi|242350488|gb|EES42089.1| DNA ligase [Staphylococcus epidermidis M23864:W1] Length = 667 Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 25/62 (40%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + V L + + YY D+P D YD++ L ++ + PE D P Sbjct: 2 EDLQRRVNELHDLLNQYSYEYYVQDNPSVPDSEYDKLLHELIEIETEHPEYKTADSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|229828351|ref|ZP_04454420.1| hypothetical protein GCWU000342_00409 [Shuttleworthia satelles DSM 14600] gi|229792945|gb|EEP29059.1| hypothetical protein GCWU000342_00409 [Shuttleworthia satelles DSM 14600] Length = 675 Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 26/56 (46%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L+ +H YY D +D YD++ ++L A + + P+ D P +G Sbjct: 6 YQELIDQINYHMDLYYNQDKTEISDYEYDQLMQQLKAAEAEHPDWVRPDSPSQKIG 61 >gi|163747147|ref|ZP_02154503.1| DNA ligase, NAD-dependent [Oceanibulbus indolifex HEL-45] gi|161379708|gb|EDQ04121.1| DNA ligase, NAD-dependent [Oceanibulbus indolifex HEL-45] Length = 685 Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ D P +D YD + R A++ ++P+L +D P VG Sbjct: 12 YHTEDAPEISDAEYDALKRRNAAIEARYPDLKRDDSPTEQVG 53 >gi|83312957|ref|YP_423221.1| NAD-dependent DNA ligase [Magnetospirillum magneticum AMB-1] gi|123726860|sp|Q2W0G3|DNLJ_MAGMM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|82947798|dbj|BAE52662.1| NAD-dependent DNA ligase [Magnetospirillum magneticum AMB-1] Length = 698 Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V +L+ EA IE LV+ + Y+ D P D +YD RL ++ +FPEL Sbjct: 3 PVEALTPFEARIEHAELVETIARWDEAYHAKDAPEVPDDVYDGAKRRLARIEGRFPEL-A 61 Query: 110 EDHPWN-TVG 118 P VG Sbjct: 62 AKSPIRDKVG 71 >gi|258421012|ref|ZP_05683943.1| DNA ligase, NAD-dependent [Staphylococcus aureus A9719] gi|257842960|gb|EEV67378.1| DNA ligase, NAD-dependent [Staphylococcus aureus A9719] Length = 667 Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + V L + + YY D+P D YD++ L ++E+ PE D P Sbjct: 2 ADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|82751560|ref|YP_417301.1| DNA ligase [Staphylococcus aureus RF122] gi|123754599|sp|Q2YU70|DNLJ_STAAB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|82657091|emb|CAI81528.1| DNA ligase [Staphylococcus aureus RF122] Length = 667 Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + V L + + YY D+P D YD++ L ++E+ PE D P Sbjct: 2 ADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|38233671|ref|NP_939438.1| NAD-dependent DNA ligase LigA [Corynebacterium diphtheriae NCTC 13129] gi|81401524|sp|Q6NHQ4|DNLJ_CORDI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|38199932|emb|CAE49600.1| DNA ligase [Corynebacterium diphtheriae] Length = 677 Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + + + + L + HH+ YY P +D +D++ +L L+++ PEL + P Sbjct: 4 NFADLRRQWDDLAEQVRHHRDAYYNH-TPEISDAEFDQLFRQLQQLEQEHPELAVPESPT 62 Query: 115 NTVG 118 VG Sbjct: 63 LRVG 66 >gi|161723110|ref|YP_288664.2| NAD-dependent DNA ligase LigA [Thermobifida fusca YX] Length = 731 Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 + L + + YY L P+ +D YD++ L L+ Q+P L D P Sbjct: 13 PADVRERHARLSQDLDDYSYRYY-LGSPIISDAEYDQLMAELRDLEAQYPSLVTPDSPTQ 71 Query: 116 TVG 118 VG Sbjct: 72 KVG 74 >gi|284166901|ref|YP_003405180.1| DNA ligase, NAD-dependent [Haloterrigena turkmenica DSM 5511] gi|284016556|gb|ADB62507.1| DNA ligase, NAD-dependent [Haloterrigena turkmenica DSM 5511] Length = 692 Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 V LS+ EA +VE L + H + YY DP+ D YD + RL L++ F Sbjct: 19 DFAPVGELSEDEAREQVELLREAIREHDRRYYVESDPVIADRTYDALFARLRDLEDAF-G 77 Query: 107 LFDEDHPWNTVG 118 L D P +VG Sbjct: 78 LEHPDSPTRSVG 89 >gi|229137130|ref|ZP_04265749.1| DNA ligase [Bacillus cereus BDRD-ST26] gi|228646302|gb|EEL02517.1| DNA ligase [Bacillus cereus BDRD-ST26] Length = 74 Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK A +E L + Y+ LD+P +D YDR + L L+ + PE ED P Sbjct: 1 MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SVRVG 65 >gi|159904348|ref|YP_001551692.1| NAD-dependent DNA ligase LigA [Prochlorococcus marinus str. MIT 9211] gi|254781392|sp|A9BDC5|DNLJ_PROM4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|159889524|gb|ABX09738.1| NAD-dependent DNA ligase (contains BRCT domain type II) [Prochlorococcus marinus str. MIT 9211] Length = 697 Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 25/54 (46%) Query: 65 YLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L K+ YY LD PL D +YDR+ L +++ P L D P +G Sbjct: 14 ELRKLLNRANHAYYVLDTPLMEDTVYDRLYRELLNIEKNHPSLITADSPSQRLG 67 >gi|329954852|ref|ZP_08295869.1| DNA ligase [Bacteroides clarus YIT 12056] gi|328526956|gb|EGF53967.1| DNA ligase [Bacteroides clarus YIT 12056] Length = 665 Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L H YY L+ P +D +D L L+++ PE DE+ P VG Sbjct: 3 IKEKIDQLRADLHRHNYNYYVLNTPEISDKEFDDRMRELQELEKEHPEYQDENSPTMRVG 62 >gi|57650655|ref|YP_186789.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus COL] gi|81694155|sp|Q5HEL8|DNLJ_STAAC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|57284841|gb|AAW36935.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus COL] Length = 667 Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + V L + + YY D+P D YD++ L ++E+ PE D P Sbjct: 2 ADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|146301217|ref|YP_001195808.1| DNA ligase, NAD-dependent [Flavobacterium johnsoniae UW101] gi|190359257|sp|A5FE87|DNLJ_FLAJO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|146155635|gb|ABQ06489.1| DNA ligase, NAD-dependent [Flavobacterium johnsoniae UW101] Length = 668 Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 28/56 (50%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + H YY LD+ +D +D + L L+ + PE FDED P VG Sbjct: 7 IQTLREELNQHNYNYYVLDNATISDYDFDIKLKELQDLENKHPEFFDEDSPTQRVG 62 >gi|289435095|ref|YP_003464967.1| DNA ligase, NAD-dependent [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171339|emb|CBH27881.1| DNA ligase, NAD-dependent [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 671 Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 25/59 (42%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L+ I + YY +D+P D YD+ + L ++ PE + P VG Sbjct: 4 KKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLQIEAAHPEWVTPESPSKRVG 62 >gi|258422981|ref|ZP_05685880.1| DNA ligase, NAD-dependent [Staphylococcus aureus A9635] gi|257846768|gb|EEV70783.1| DNA ligase, NAD-dependent [Staphylococcus aureus A9635] Length = 667 Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + V L + + YY D+P D YD++ L ++E+ PE D P Sbjct: 2 ADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|253729682|ref|ZP_04863847.1| DNA ligase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253726568|gb|EES95297.1| DNA ligase [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 667 Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + V L + + YY D+P D YD++ L ++E+ PE D P Sbjct: 2 ADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|302333569|gb|ADL23762.1| DNA ligase (polydeoxyribonucleotide syntase) [Staphylococcus aureus subsp. aureus JKD6159] Length = 667 Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + V L + + YY D+P D YD++ L ++E+ PE D P Sbjct: 2 ADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|21283574|ref|NP_646662.1| DNA ligase [Staphylococcus aureus subsp. aureus MW2] gi|49486723|ref|YP_043944.1| DNA ligase [Staphylococcus aureus subsp. aureus MSSA476] gi|87161485|ref|YP_494537.1| DNA ligase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195803|ref|YP_500613.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151222054|ref|YP_001332876.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus str. Newman] gi|161510127|ref|YP_001575786.1| DNA ligase (NAD(+)) [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140357|ref|ZP_03564850.1| DNA ligase (NAD(+)) [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253734986|ref|ZP_04869151.1| DNA ligase [Staphylococcus aureus subsp. aureus TCH130] gi|258451030|ref|ZP_05699066.1| DNA ligase, NAD-dependent [Staphylococcus aureus A5948] gi|282923243|ref|ZP_06330924.1| DNA ligase, NAD-dependent [Staphylococcus aureus A9765] gi|284024951|ref|ZP_06379349.1| DNA ligase [Staphylococcus aureus subsp. aureus 132] gi|294849453|ref|ZP_06790195.1| DNA ligase [Staphylococcus aureus A9754] gi|297208934|ref|ZP_06925338.1| NAD-dependent DNA ligase LigA [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300913009|ref|ZP_07130447.1| NAD-dependent DNA ligase LigA [Staphylococcus aureus subsp. aureus TCH70] gi|304379092|ref|ZP_07361839.1| NAD-dependent DNA ligase LigA [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|75410712|sp|Q9AIU7|DNLJ_STAAU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|81649030|sp|Q6G829|DNLJ_STAAS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|81704301|sp|Q7A0H1|DNLJ_STAAW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|123098079|sp|Q2G1Y0|DNLJ_STAA8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|123749595|sp|Q2FFJ1|DNLJ_STAA3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190359293|sp|A6QID2|DNLJ_STAAE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190359294|sp|A8Z2R8|DNLJ_STAAT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|13182984|gb|AAK15020.1| DNA ligase [Staphylococcus aureus] gi|21205015|dbj|BAB95710.1| DNA ligase [Staphylococcus aureus subsp. aureus MW2] gi|49245166|emb|CAG43632.1| DNA ligase [Staphylococcus aureus subsp. aureus MSSA476] gi|87127459|gb|ABD21973.1| DNA ligase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203361|gb|ABD31171.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374854|dbj|BAF68114.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus str. Newman] gi|160368936|gb|ABX29907.1| DNA ligase (NAD(+)) [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253727168|gb|EES95897.1| DNA ligase [Staphylococcus aureus subsp. aureus TCH130] gi|257861272|gb|EEV84084.1| DNA ligase, NAD-dependent [Staphylococcus aureus A5948] gi|269941376|emb|CBI49773.1| DNA ligase [Staphylococcus aureus subsp. aureus TW20] gi|282593154|gb|EFB98153.1| DNA ligase, NAD-dependent [Staphylococcus aureus A9765] gi|294823590|gb|EFG40017.1| DNA ligase [Staphylococcus aureus A9754] gi|296886424|gb|EFH25353.1| NAD-dependent DNA ligase LigA [Staphylococcus aureus subsp. aureus ATCC 51811] gi|298695246|gb|ADI98468.1| DNA ligase [Staphylococcus aureus subsp. aureus ED133] gi|300885787|gb|EFK80994.1| NAD-dependent DNA ligase LigA [Staphylococcus aureus subsp. aureus TCH70] gi|302751777|gb|ADL65954.1| DNA ligase (polydeoxyribonucleotide syntase) [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304342327|gb|EFM08219.1| NAD-dependent DNA ligase LigA [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|320139715|gb|EFW31584.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus MRSA131] gi|320142368|gb|EFW34182.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus MRSA177] gi|323439848|gb|EGA97564.1| DNA ligase [Staphylococcus aureus O11] gi|323443011|gb|EGB00632.1| DNA ligase [Staphylococcus aureus O46] gi|329314581|gb|AEB88994.1| DNA ligase [Staphylococcus aureus subsp. aureus T0131] gi|329728576|gb|EGG65006.1| DNA ligase (NAD+) [Staphylococcus aureus subsp. aureus 21189] gi|329731482|gb|EGG67845.1| DNA ligase (NAD+) [Staphylococcus aureus subsp. aureus 21193] Length = 667 Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + V L + + YY D+P D YD++ L ++E+ PE D P Sbjct: 2 ADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|283471175|emb|CAQ50386.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus ST398] Length = 667 Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + V L + + YY D+P D YD++ L ++E+ PE D P Sbjct: 2 ADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|15924894|ref|NP_372428.1| DNA ligase [Staphylococcus aureus subsp. aureus Mu50] gi|15927478|ref|NP_375011.1| DNA ligase (polydeoxyribonucleotide syntase) [Staphylococcus aureus subsp. aureus N315] gi|148268377|ref|YP_001247320.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus JH9] gi|150394439|ref|YP_001317114.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus JH1] gi|156980220|ref|YP_001442479.1| DNA ligase [Staphylococcus aureus subsp. aureus Mu3] gi|253316913|ref|ZP_04840126.1| DNA ligase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006691|ref|ZP_05145292.2| DNA ligase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|258408884|ref|ZP_05681166.1| DNA ligase [Staphylococcus aureus A9763] gi|258430016|ref|ZP_05688386.1| DNA ligase [Staphylococcus aureus A9299] gi|258443466|ref|ZP_05691808.1| DNA ligase [Staphylococcus aureus A8115] gi|258445324|ref|ZP_05693515.1| DNA ligase [Staphylococcus aureus A6300] gi|258447888|ref|ZP_05696022.1| DNA ligase [Staphylococcus aureus A6224] gi|258453321|ref|ZP_05701306.1| DNA ligase [Staphylococcus aureus A5937] gi|269203557|ref|YP_003282826.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus ED98] gi|282894571|ref|ZP_06302799.1| DNA ligase, NAD-dependent [Staphylococcus aureus A8117] gi|282928077|ref|ZP_06335684.1| DNA ligase, NAD-dependent [Staphylococcus aureus A10102] gi|295407285|ref|ZP_06817084.1| DNA ligase [Staphylococcus aureus A8819] gi|296275664|ref|ZP_06858171.1| DNA ligase [Staphylococcus aureus subsp. aureus MR1] gi|297246190|ref|ZP_06930041.1| DNA ligase [Staphylococcus aureus A8796] gi|81705420|sp|Q7A4Q5|DNLJ_STAAN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|81781309|sp|Q99SY3|DNLJ_STAAM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166216246|sp|A7X432|DNLJ_STAA1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190359291|sp|A6U309|DNLJ_STAA2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190359292|sp|A5IU71|DNLJ_STAA9 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|13701697|dbj|BAB42990.1| DNA ligase [Staphylococcus aureus subsp. aureus N315] gi|14247676|dbj|BAB58066.1| DNA ligase [Staphylococcus aureus subsp. aureus Mu50] gi|147741446|gb|ABQ49744.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus JH9] gi|149946891|gb|ABR52827.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus JH1] gi|156722355|dbj|BAF78772.1| DNA ligase [Staphylococcus aureus subsp. aureus Mu3] gi|257840331|gb|EEV64793.1| DNA ligase [Staphylococcus aureus A9763] gi|257849610|gb|EEV73578.1| DNA ligase [Staphylococcus aureus A9299] gi|257851351|gb|EEV75291.1| DNA ligase [Staphylococcus aureus A8115] gi|257855842|gb|EEV78766.1| DNA ligase [Staphylococcus aureus A6300] gi|257858820|gb|EEV81689.1| DNA ligase [Staphylococcus aureus A6224] gi|257864529|gb|EEV87272.1| DNA ligase [Staphylococcus aureus A5937] gi|262075847|gb|ACY11820.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus ED98] gi|282590141|gb|EFB95222.1| DNA ligase, NAD-dependent [Staphylococcus aureus A10102] gi|282763058|gb|EFC03190.1| DNA ligase, NAD-dependent [Staphylococcus aureus A8117] gi|285817585|gb|ADC38072.1| DNA ligase [Staphylococcus aureus 04-02981] gi|294967860|gb|EFG43890.1| DNA ligase [Staphylococcus aureus A8819] gi|297176897|gb|EFH36154.1| DNA ligase [Staphylococcus aureus A8796] gi|312830277|emb|CBX35119.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129286|gb|EFT85280.1| DNA ligase [Staphylococcus aureus subsp. aureus CGS03] gi|329724802|gb|EGG61306.1| DNA ligase (NAD+) [Staphylococcus aureus subsp. aureus 21172] Length = 667 Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + V L + + YY D+P D YD++ L ++E+ PE D P Sbjct: 2 ADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|323143662|ref|ZP_08078336.1| DNA ligase (NAD+) [Succinatimonas hippei YIT 12066] gi|322416595|gb|EFY07255.1| DNA ligase (NAD+) [Succinatimonas hippei YIT 12066] Length = 696 Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 30/56 (53%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + K YY DDP+ TD YDR+ +L+ +++ P + D P VG Sbjct: 8 YKDLVALLNRYAKAYYVDDDPIVTDSEYDRLYRQLEIMEQADPTIISPDSPTRRVG 63 >gi|55379625|ref|YP_137475.1| NAD-dependent DNA ligase LigA [Haloarcula marismortui ATCC 43049] gi|74516349|sp|Q5UY84|DNLJ_HALMA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|55232350|gb|AAV47769.1| DNA ligase [Haloarcula marismortui ATCC 43049] Length = 691 Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 1/72 (1%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 + V + A + + L + +H YY +DP+ D YD + RL L+ F Sbjct: 19 DFESVEDVDAETAREQADQLREALRYHDYRYYVENDPVIGDRAYDALFSRLQRLESAF-N 77 Query: 107 LFDEDHPWNTVG 118 L + P VG Sbjct: 78 LDTDGSPTQRVG 89 >gi|78214056|ref|YP_382835.1| NAD-dependent DNA ligase LigA [Synechococcus sp. CC9605] gi|123729638|sp|Q3AGK2|DNLJ_SYNSC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|78198515|gb|ABB36280.1| DNA ligase, NAD-dependent [Synechococcus sp. CC9605] Length = 680 Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 23/58 (39%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + YY LD P D +YDR+ L L++ P L D P VG Sbjct: 6 ERAAELRHLLNRAGHAYYVLDAPEMEDTVYDRLYRELLELEQNDPGLQRPDSPTQRVG 63 >gi|16329180|ref|NP_439908.1| NAD-dependent DNA ligase LigA [Synechocystis sp. PCC 6803] gi|7674015|sp|P72588|DNLJ_SYNY3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|1651660|dbj|BAA16588.1| DNA ligase [Synechocystis sp. PCC 6803] Length = 669 Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 23/44 (52%) Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P+ D +YD++ L L+ + PEL D P VG Sbjct: 19 YAYYVLDAPVMEDSVYDQLYRELQRLEAENPELITPDSPTQRVG 62 >gi|260655066|ref|ZP_05860554.1| DNA ligase, NAD-dependent [Jonquetella anthropi E3_33 E1] gi|260630177|gb|EEX48371.1| DNA ligase, NAD-dependent [Jonquetella anthropi E3_33 E1] Length = 670 Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV+ + YY D P+ +D +D++ L +++ + P+ D P VG Sbjct: 4 RARYDELVETVNENSYLYYVKDAPVLSDFEWDQLMNELLSIEREHPDWIRPDSPSRRVG 62 >gi|89891625|ref|ZP_01203129.1| DNA ligase [Flavobacteria bacterium BBFL7] gi|89516172|gb|EAS18835.1| DNA ligase [Flavobacteria bacterium BBFL7] Length = 684 Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L H YY D+P +D +D+ E+L L+ PE +D P VG Sbjct: 4 KEQIQSLRDELREHNYNYYVNDNPTISDFEFDKKLEQLKTLEAAHPEFYDATSPSVRVG 62 >gi|319955749|ref|YP_004167016.1| DNA ligase [Cellulophaga algicola DSM 14237] gi|319424409|gb|ADV51518.1| DNA ligase [Cellulophaga algicola DSM 14237] Length = 666 Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E+ ++E L H YY LD P +D +D + L L+E+ PE +D P V Sbjct: 2 ESKQKIEALRIGLREHNYNYYVLDTPTISDYDFDMQLKELQDLEEKHPEFYDATSPSLRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|255327262|ref|ZP_05368336.1| DNA ligase, NAD-dependent [Rothia mucilaginosa ATCC 25296] gi|255295542|gb|EET74885.1| DNA ligase, NAD-dependent [Rothia mucilaginosa ATCC 25296] Length = 735 Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 A+ +++ E L ++ YY D P +D YD++ RL+ ++ + P Sbjct: 12 PAENTAEITEA-LRAEYAELTDKIRAARRAYYNEDAPFLSDAEYDKLYRRLEIIEAEHPL 70 Query: 107 LFDEDHPWNTVG 118 + D P VG Sbjct: 71 IIANDSPTQEVG 82 >gi|116074145|ref|ZP_01471407.1| DNA ligase [Synechococcus sp. RS9916] gi|116069450|gb|EAU75202.1| DNA ligase [Synechococcus sp. RS9916] Length = 691 Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ A + L + YY LD P+ D +YDR+ L L+ P L D P Sbjct: 1 MTAASAQ-RAQELRGLLNTAAHAYYVLDAPVMEDPVYDRLYRELLELESADPSLVTVDSP 59 Query: 114 WNTVG 118 VG Sbjct: 60 TQRVG 64 >gi|325102906|ref|YP_004272560.1| DNA ligase, NAD-dependent [Pedobacter saltans DSM 12145] gi|324971754|gb|ADY50738.1| DNA ligase, NAD-dependent [Pedobacter saltans DSM 12145] Length = 670 Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S E +++ LV H YY+L P +D +D+ + L+ L+++ P D P Sbjct: 1 MSLFEIKEKIDALVTELNRHNYNYYQLAMPTISDYEFDQKLKELEKLEQENPAFIRIDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQKVG 65 >gi|313632855|gb|EFR99806.1| DNA ligase, NAD-dependent [Listeria seeligeri FSL N1-067] Length = 678 Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 25/59 (42%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L+ I + YY +D+P D YD+ + L ++ PE + P VG Sbjct: 11 KKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLQIEAAHPEWITPESPSKRVG 69 >gi|118581474|ref|YP_902724.1| DNA ligase, NAD-dependent [Pelobacter propionicus DSM 2379] gi|166216225|sp|A1ATJ6|DNLJ_PELPD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|118504184|gb|ABL00667.1| DNA ligase, NAD-dependent [Pelobacter propionicus DSM 2379] Length = 704 Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 2/72 (2%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDP--LFTDGLYDRVSERLDALQEQFPE 106 T +K ++ L ++ H+ + YY P D YD + + L L+ +FPE Sbjct: 4 SPTTEQTKNIVAERIQELRQLIAHNNRLYYENIPPRREIHDYEYDELFKELQELESRFPE 63 Query: 107 LFDEDHPWNTVG 118 D P VG Sbjct: 64 FQSADSPTQIVG 75 >gi|282917251|ref|ZP_06325006.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus D139] gi|283771054|ref|ZP_06343945.1| DNA ligase [Staphylococcus aureus subsp. aureus H19] gi|282318878|gb|EFB49233.1| DNA ligase, NAD-dependent [Staphylococcus aureus subsp. aureus D139] gi|283459648|gb|EFC06739.1| DNA ligase [Staphylococcus aureus subsp. aureus H19] Length = 667 Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + V L + + YY D+P D YD++ L ++E+ PE D P Sbjct: 2 ADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELINIEEEHPEYKTVDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|87119444|ref|ZP_01075341.1| NAD-dependent DNA ligase [Marinomonas sp. MED121] gi|86164920|gb|EAQ66188.1| NAD-dependent DNA ligase [Marinomonas sp. MED121] Length = 676 Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV + Y+ D+P +D YD L AL++Q P+L D P VG Sbjct: 7 AQISELVNRLNDYSYAYHVKDEPKVSDAEYDLDYRTLIALEKQAPDLIQADSPTQRVG 64 >gi|227540068|ref|ZP_03970117.1| DNA ligase (NAD(+)) [Sphingobacterium spiritivorum ATCC 33300] gi|227240084|gb|EEI90099.1| DNA ligase (NAD(+)) [Sphingobacterium spiritivorum ATCC 33300] Length = 673 Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S E ++ L + H+ YY L L +D +D+ + L+AL+ Q+P+ D + P Sbjct: 1 MSAVEIQEKIAQLTQELNHYNYQYYVLAQSLISDYDFDQKLKELEALESQYPQFADPNSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TRRVG 65 >gi|300771799|ref|ZP_07081670.1| NAD-dependent DNA ligase LigA [Sphingobacterium spiritivorum ATCC 33861] gi|300761185|gb|EFK58010.1| NAD-dependent DNA ligase LigA [Sphingobacterium spiritivorum ATCC 33861] Length = 673 Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S E ++ L + H+ YY L L +D +D+ + L+AL+ Q+P+ D + P Sbjct: 1 MSAVEIQEKIAQLTQELNHYNYQYYVLAQSLISDYDFDQKLKELEALESQYPQFADPNSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TRRVG 65 >gi|294789790|ref|ZP_06755020.1| DNA ligase, NAD-dependent [Simonsiella muelleri ATCC 29453] gi|294482296|gb|EFG29993.1| DNA ligase, NAD-dependent [Simonsiella muelleri ATCC 29453] Length = 798 Score = 80.7 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 24/53 (45%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + + YY LD P D YDR+ L+AL+ +P + P VG Sbjct: 14 LTEKLNRYAHEYYTLDAPSVPDSEYDRLYRELEALEMAYPTFRLPESPTQRVG 66 >gi|228476354|ref|ZP_04061055.1| DNA ligase, NAD-dependent [Staphylococcus hominis SK119] gi|228269637|gb|EEK11143.1| DNA ligase, NAD-dependent [Staphylococcus hominis SK119] Length = 667 Score = 80.7 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V L + + YY D+P D YD++ L ++ PEL +D P VG Sbjct: 4 IQNRVNELHDLLNQYSYEYYVKDNPSVPDSEYDKLLRELIDIENAHPELKTDDSPTVRVG 63 >gi|314936043|ref|ZP_07843392.1| DNA ligase, NAD-dependent [Staphylococcus hominis subsp. hominis C80] gi|313655860|gb|EFS19603.1| DNA ligase, NAD-dependent [Staphylococcus hominis subsp. hominis C80] Length = 667 Score = 80.7 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V L + + YY D+P D YD++ L ++ PEL +D P VG Sbjct: 4 IQNRVNELHDLLNQYSYEYYVKDNPSVPDSEYDKLLRELIDIENAHPELKTDDSPTVRVG 63 >gi|237807406|ref|YP_002891846.1| DNA ligase, NAD-dependent [Tolumonas auensis DSM 9187] gi|237499667|gb|ACQ92260.1| DNA ligase, NAD-dependent [Tolumonas auensis DSM 9187] Length = 686 Score = 80.7 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 26/61 (42%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + L ++ + YY D+P D YDR+ L L+ P+ D + P V Sbjct: 3 EIQSRMHALQQLLERYNTEYYLHDEPSVPDAEYDRLMNELRELEAANPQWLDVNSPTQRV 62 Query: 118 G 118 G Sbjct: 63 G 63 >gi|146329194|ref|YP_001209306.1| DNA ligase, NAD-dependent [Dichelobacter nodosus VCS1703A] gi|166215582|sp|A5EVZ5|DNLJ_DICNV RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|146232664|gb|ABQ13642.1| DNA ligase, NAD-dependent [Dichelobacter nodosus VCS1703A] Length = 678 Score = 80.7 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+E L + H+ YY L+ P D +D + ++L AL+ D P VG Sbjct: 8 IAAELEALRQTIRAHEYAYYVLEAPNIADSEFDALMQKLRALEAASGLPIPADSPTQRVG 67 >gi|322385709|ref|ZP_08059353.1| NAD-dependent DNA ligase LigA [Streptococcus cristatus ATCC 51100] gi|321270447|gb|EFX53363.1| NAD-dependent DNA ligase LigA [Streptococcus cristatus ATCC 51100] Length = 652 Score = 80.7 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LVK+ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 2 KERMSELVKLLNRYAHEYYTADRPSVSDSEYDRLYRELVELEEKYPTDILPDSPTHRVG 60 >gi|85713360|ref|ZP_01044373.1| NAD-dependent DNA ligase [Idiomarina baltica OS145] gi|85692818|gb|EAQ30803.1| NAD-dependent DNA ligase [Idiomarina baltica OS145] Length = 449 Score = 80.7 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + + K YY LD+P D YD++ L L+ PEL + P VG Sbjct: 7 VEQRMRELEQQLTRYNKEYYELDEPTIPDSEYDKLFRELQTLEANNPELKSQHSPTEKVG 66 >gi|189490484|ref|YP_001957054.1| putative DNA ligase [Pseudomonas phage 201phi2-1] gi|164609549|gb|ABY63158.1| putative DNA ligase [Pseudomonas phage 201phi2-1] Length = 695 Score = 80.7 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 30/58 (51%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 E + L K H+ YY LD + D LYD++ L L+++ PE D P TVG+ Sbjct: 6 EYDVLCKRIRHYNYMYYVLDISIIPDSLYDQLLISLKLLEKEHPEWVTRDSPTQTVGH 63 >gi|56460801|ref|YP_156082.1| NAD-dependent DNA ligase [Idiomarina loihiensis L2TR] gi|81362279|sp|Q5QUK1|DNLJ_IDILO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|56179811|gb|AAV82533.1| NAD-dependent DNA ligase [Idiomarina loihiensis L2TR] Length = 670 Score = 80.7 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L ++ + + YY D+P D YDR+ L L+ + P+L P VG Sbjct: 7 QRMQELEQLLNRYNQEYYENDEPSVPDAEYDRLFRELKTLETEHPDLKSAQSPTMKVG 64 >gi|317051097|ref|YP_004112213.1| DNA ligase, NAD-dependent [Desulfurispirillum indicum S5] gi|316946181|gb|ADU65657.1| DNA ligase, NAD-dependent [Desulfurispirillum indicum S5] Length = 660 Score = 80.7 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S E ++ L + + YY L DP+ DG YD + L AL+ +FP+ D P Sbjct: 1 MSAAE-RERIDQLTALLQKADEAYYTLADPIMGDGEYDGLYRELRALEARFPQYVHADSP 59 Query: 114 WNTVG 118 +G Sbjct: 60 TRRIG 64 >gi|330984116|gb|EGH82219.1| DNA ligase, NAD-dependent [Pseudomonas syringae pv. lachrymans str. M301315] Length = 675 Score = 80.7 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 24/57 (42%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + H Y+ LD+P TD Y+ + + L A++ P D P +G Sbjct: 6 RAAELRHLIDHANYRYHVLDEPTITDNEYNALFQELLAIEAADPTQQTPDSPTQKIG 62 >gi|320094066|ref|ZP_08025884.1| NAD-dependent DNA ligase LigA [Actinomyces sp. oral taxon 178 str. F0338] gi|319979007|gb|EFW10532.1| NAD-dependent DNA ligase LigA [Actinomyces sp. oral taxon 178 str. F0338] Length = 776 Score = 80.7 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 27/64 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S + LV ++ YY D P D YDR+ L+ ++ P+L D P Sbjct: 6 SFDAIRSRYDQLVAAIEEARRAYYDRDAPTLADAEYDRLYRELEDIERAHPQLRGADSPT 65 Query: 115 NTVG 118 +VG Sbjct: 66 LSVG 69 >gi|313125027|ref|YP_004035291.1| DNA ligase, NAD-dependent [Halogeometricum borinquense DSM 11551] gi|312291392|gb|ADQ65852.1| DNA ligase, NAD-dependent [Halogeometricum borinquense DSM 11551] Length = 694 Score = 80.7 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 1/83 (1%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 P+ L + V SLS A E L + H YY DPL D YD + Sbjct: 12 PDNPYLTDPDTDFEPVESLSAEAAEREARLLREAVREHDHRYYVAADPLVADRTYDALFN 71 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 RL L++ F +L DE P VG Sbjct: 72 RLQELEDAF-DLDDESSPTRRVG 93 >gi|251782129|ref|YP_002996431.1| NAD-dependent DNA ligase LigA [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390758|dbj|BAH81217.1| NAD-dependent DNA ligase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 652 Score = 80.7 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L ++ +++ YY D P +D YD++ L L+ Q+PE +D P VG Sbjct: 2 KKRIRELTELLNRYRQEYYTNDSPSVSDSEYDKLYRELVDLENQYPEHVLQDSPTQNVG 60 >gi|322387936|ref|ZP_08061543.1| NAD-dependent DNA ligase LigA [Streptococcus infantis ATCC 700779] gi|321141209|gb|EFX36707.1| NAD-dependent DNA ligase LigA [Streptococcus infantis ATCC 700779] Length = 652 Score = 80.7 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 29/58 (50%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV++ + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 3 ERMKELVELLNRYATEYYTSDNPSVSDSEYDRLYRELVELEIAYPEQVLPDSPTHRVG 60 >gi|323126984|gb|ADX24281.1| NAD-dependent DNA ligase LigA [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 652 Score = 80.3 bits (197), Expect = 7e-14, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L ++ +++ YY D P +D YD++ L L+ Q+PE +D P VG Sbjct: 2 KKRIRELTELLNRYRQEYYTNDSPSVSDSEYDKLYRELVDLENQYPEHVLQDSPTQNVG 60 >gi|144899097|emb|CAM75961.1| NAD-dependent DNA ligase [Magnetospirillum gryphiswaldense MSR-1] Length = 693 Score = 80.3 bits (197), Expect = 7e-14, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + +L+ EA IE L + + Y++ D P D YD RL A++ +FPEL Sbjct: 5 IDALTPFEARIEASALREKLIRWDLAYHQADAPEVDDATYDAAKLRLLAIEARFPEL-AA 63 Query: 111 DHPWNTVG 118 P +G Sbjct: 64 GSPTAKIG 71 >gi|254564006|ref|YP_003071101.1| DNA ligase [Methylobacterium extorquens DM4] gi|254271284|emb|CAX27296.1| DNA ligase, NAD(+)-dependent [Methylobacterium extorquens DM4] Length = 814 Score = 80.3 bits (197), Expect = 7e-14, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 31/71 (43%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + V +LS+ A L + + YY D P TD YD + + L+A++ +FP L Sbjct: 7 SAAVEALSEDAAQARHAELSRAIERANQLYYNEDAPELTDAEYDALRQELEAIEARFPAL 66 Query: 108 FDEDHPWNTVG 118 VG Sbjct: 67 TGTTEASAGVG 77 >gi|227501728|ref|ZP_03931777.1| NAD-dependent DNA ligase LigA [Corynebacterium accolens ATCC 49725] gi|227077753|gb|EEI15716.1| NAD-dependent DNA ligase LigA [Corynebacterium accolens ATCC 49725] Length = 680 Score = 80.3 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L + H+ YY +P D +D + +RL L++Q PEL D P VG Sbjct: 2 QREWNDLAQEVRRHRNLYY-NGEPAIPDADFDALFQRLMDLEKQHPELAVPDSPTQQVG 59 >gi|114768813|ref|ZP_01446439.1| DNA ligase [alpha proteobacterium HTCC2255] gi|114549730|gb|EAU52611.1| DNA ligase [alpha proteobacterium HTCC2255] Length = 711 Score = 80.3 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 35/74 (47%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + + V L K +A E+ L +I YY D P+ +D YD + +R ++ +F Sbjct: 1 MSEDHPVEKLDKMQAEKELIRLNEILDRANSDYYSNDAPILSDAEYDTLKKRNLDIESRF 60 Query: 105 PELFDEDHPWNTVG 118 P L ++ + +G Sbjct: 61 PNLKLKNSVSDKIG 74 >gi|304436815|ref|ZP_07396781.1| NAD-dependent DNA ligase LigA [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370187|gb|EFM23846.1| NAD-dependent DNA ligase LigA [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 677 Score = 80.3 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 54 LSK-GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +SK E E+ L + + K YY ++ +D +D + RL L+ +PEL ++ Sbjct: 1 MSKIDEVKTELSELRRKIRKYSKQYYDDNESEISDYDFDMLMMRLKKLEAAYPELITKNS 60 Query: 113 PWNTVG 118 P TVG Sbjct: 61 PTRTVG 66 >gi|297191909|ref|ZP_06909307.1| DNA ligase [Streptomyces pristinaespiralis ATCC 25486] gi|197721112|gb|EDY65020.1| DNA ligase [Streptomyces pristinaespiralis ATCC 25486] Length = 736 Score = 80.3 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 31/62 (50%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 +A E L + H+ YY D P+ +D +D++ L+ L+E++PEL D P Sbjct: 19 PAQAREEHALLAEQIEEHRFRYYVKDSPVISDAEFDKLLRELEGLEERYPELRTPDSPTQ 78 Query: 116 TV 117 V Sbjct: 79 KV 80 >gi|240141492|ref|YP_002965972.1| DNA ligase, NAD(+)-dependent [Methylobacterium extorquens AM1] gi|240011469|gb|ACS42695.1| DNA ligase, NAD(+)-dependent [Methylobacterium extorquens AM1] Length = 814 Score = 80.3 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 31/71 (43%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + V +LS+ A L + + YY D P TD YD + + L+A++ +FP L Sbjct: 7 SAAVEALSEDAAQARHAELSRAIERANQLYYNEDAPELTDAEYDALRQELEAIEARFPAL 66 Query: 108 FDEDHPWNTVG 118 VG Sbjct: 67 TGTTEASAGVG 77 >gi|325694926|gb|EGD36831.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK150] Length = 652 Score = 80.3 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV++ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 2 KERMSELVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEEKYPTDILPDSPTHRVG 60 >gi|324993931|gb|EGC25850.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK405] gi|324994750|gb|EGC26663.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK678] gi|327463193|gb|EGF09514.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK1] Length = 652 Score = 80.3 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV++ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 2 KERMSELVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEEKYPTDILPDSPTHRVG 60 >gi|163854038|ref|YP_001642081.1| DNA ligase, NAD-dependent [Methylobacterium extorquens PA1] gi|254781364|sp|A9VWA4|DNLJ_METEP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|163665643|gb|ABY33010.1| DNA ligase, NAD-dependent [Methylobacterium extorquens PA1] Length = 814 Score = 80.3 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 31/71 (43%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + V +LS+ A L + + YY D P TD YD + + L+A++ +FP L Sbjct: 7 SAAVEALSEDAAQARHAELSRAIERANQLYYNEDAPELTDAEYDALRQELEAIEARFPAL 66 Query: 108 FDEDHPWNTVG 118 VG Sbjct: 67 TGTTEASAGVG 77 >gi|218532981|ref|YP_002423797.1| DNA ligase, NAD-dependent [Methylobacterium chloromethanicum CM4] gi|254781363|sp|B7KU78|DNLJ_METC4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218525284|gb|ACK85869.1| DNA ligase, NAD-dependent [Methylobacterium chloromethanicum CM4] Length = 814 Score = 80.3 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 30/68 (44%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V +LS+ A L + + YY D P TD YD + + L+A++ +FP L Sbjct: 10 VEALSEDAAQARHAELSRAIERANQLYYNEDAPELTDAEYDALRQELEAIEARFPALTGT 69 Query: 111 DHPWNTVG 118 VG Sbjct: 70 TEASAGVG 77 >gi|149275978|ref|ZP_01882123.1| DNA ligase [Pedobacter sp. BAL39] gi|149233406|gb|EDM38780.1| DNA ligase [Pedobacter sp. BAL39] Length = 671 Score = 80.3 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK E +++ LVK H YY L P D +DR L+ L++Q+PE D + P Sbjct: 1 MSKNEVKDKMDALVKELNQHTYDYYVLAMPTIADYEFDRKLAALNKLEQQYPEYADPNSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQQVG 65 >gi|325696052|gb|EGD37943.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK160] Length = 652 Score = 79.9 bits (196), Expect = 9e-14, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV++ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 2 KERMSELVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEEKYPTDILPDSPTHRVG 60 >gi|325690880|gb|EGD32881.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK115] Length = 652 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV++ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 2 KERMSELVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEEKYPTDILPDSPTHRVG 60 >gi|238926785|ref|ZP_04658545.1| DNA ligase (NAD(+)) [Selenomonas flueggei ATCC 43531] gi|238885317|gb|EEQ48955.1| DNA ligase (NAD(+)) [Selenomonas flueggei ATCC 43531] Length = 677 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 54 LSK-GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +SK E E+ L + + K YY ++ +D +D + RL L+ +PEL ++ Sbjct: 1 MSKIDEVKTELSELRRKIRKYSKQYYDDNESEISDYDFDMLMMRLKKLEAAYPELITKNS 60 Query: 113 PWNTVG 118 P TVG Sbjct: 61 PTRTVG 66 >gi|302336117|ref|YP_003801324.1| DNA ligase, NAD-dependent [Olsenella uli DSM 7084] gi|301319957|gb|ADK68444.1| DNA ligase, NAD-dependent [Olsenella uli DSM 7084] Length = 747 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 25/58 (43%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L +I YY LDDP TD +DR+ L AL+ PEL + +G Sbjct: 46 ARAAELNRILSRAAYAYYALDDPEMTDAEFDRLLVELQALESAHPELVSPESYTQRIG 103 >gi|161507068|ref|YP_001577022.1| DNA ligase [Lactobacillus helveticus DPC 4571] gi|190359262|sp|A8YTZ3|DNLJ_LACH4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|160348057|gb|ABX26731.1| DNA ligase [Lactobacillus helveticus DPC 4571] Length = 668 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 27/67 (40%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ EA E L YY D P D +YD+ RL L++ FPE+ D Sbjct: 2 AKITLDEAKKEAASLRTKLDEWADAYYSKDAPEVEDNVYDQSYNRLLELEKAFPEIVTPD 61 Query: 112 HPWNTVG 118 VG Sbjct: 62 SITQRVG 68 >gi|325687188|gb|EGD29210.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK72] Length = 652 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV++ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 2 KERMSELVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEEKYPTDILPDSPTHRVG 60 >gi|195867759|ref|ZP_03079760.1| DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|195660614|gb|EDX53870.1| DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 9 str. ATCC 33175] Length = 673 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L + YY LDDP D +YD+V L L+ +P+ + P Sbjct: 2 DRIKAKINELKQKLDQWNYEYYVLDDPSVPDHVYDQVMRELIELENAYPQFKTNNSPSVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|157804104|ref|YP_001492653.1| NAD-dependent DNA ligase LigA [Rickettsia canadensis str. McKiel] gi|166216233|sp|A8EZT5|DNLJ_RICCK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157785367|gb|ABV73868.1| DNA ligase [Rickettsia canadensis str. McKiel] Length = 689 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S+ EA ++ L + YY ++ L +D YD++ L+++FP L E+ P Sbjct: 7 ISEKEAKKLLKELADKIERYNHAYYIENNHLVSDAEYDQLFNTNLKLEQKFPHLILENSP 66 Query: 114 WNTVG 118 VG Sbjct: 67 SKKVG 71 >gi|329936847|ref|ZP_08286526.1| NAD-dependent DNA ligase LigA [Streptomyces griseoaurantiacus M045] gi|329303772|gb|EGG47656.1| NAD-dependent DNA ligase LigA [Streptomyces griseoaurantiacus M045] Length = 731 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 +A L + H+ YY D P+ +D +DR+ L L+E+ PEL D P Sbjct: 13 PAQARERHVRLAEQIEEHRFRYYVKDAPVVSDAEFDRLLRELQELEERHPELRTPDSPTQ 72 Query: 116 TV 117 V Sbjct: 73 KV 74 >gi|327470726|gb|EGF16182.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK330] Length = 652 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV++ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 2 KERMSELVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEEKYPTDILPDSPTHRVG 60 >gi|324991571|gb|EGC23504.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK353] Length = 652 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV++ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 2 KERMSELVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEEKYPTDILPDSPTHRVG 60 >gi|323351288|ref|ZP_08086944.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis VMC66] gi|322122512|gb|EFX94223.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis VMC66] Length = 652 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV++ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 2 KERMSELVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEEKYPTDILPDSPTHRVG 60 >gi|125718295|ref|YP_001035428.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK36] gi|166216249|sp|A3CNX3|DNLJ_STRSV RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|125498212|gb|ABN44878.1| DNA ligase, putative [Streptococcus sanguinis SK36] Length = 652 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV++ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 2 KERMSELVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEEKYPTDILPDSPTHRVG 60 >gi|327489925|gb|EGF21714.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK1058] Length = 652 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV++ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 2 KERMSELVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEEKYPTDILPDSPTHRVG 60 >gi|327461089|gb|EGF07422.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK1057] Length = 652 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV++ + YY D P +D YDR+ L L+E++P D P + VG Sbjct: 2 KERMSELVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEEKYPTDILPDSPTHRVG 60 >gi|319744895|gb|EFV97229.1| NAD-dependent DNA ligase LigA [Streptococcus agalactiae ATCC 13813] Length = 652 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + K YY D+P +D YD++ L L+EQ PE + P + VG Sbjct: 2 ENRMNELVSLLNQYAKEYYTQDNPTVSDSQYDQLYRELVELEEQHPENILPNSPTHRVG 60 >gi|25010923|ref|NP_735318.1| NAD-dependent DNA ligase LigA [Streptococcus agalactiae NEM316] gi|81457056|sp|Q8E5W1|DNLJ_STRA3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|23095302|emb|CAD46512.1| Unknown [Streptococcus agalactiae NEM316] Length = 652 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + K YY D+P +D YD++ L L+EQ PE + P + VG Sbjct: 2 ENRMNELVSLLNQYAKEYYTQDNPTVSDSQYDQLYRELVELEEQHPENILPNSPTHRVG 60 >gi|163841673|ref|YP_001626078.1| NAD-dependent DNA ligase [Renibacterium salmoninarum ATCC 33209] gi|190359277|sp|A9WTZ3|DNLJ_RENSM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|162955149|gb|ABY24664.1| NAD-dependent DNA ligase [Renibacterium salmoninarum ATCC 33209] Length = 758 Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E LV+ H++ YY + L +D +D + RL+ ++ PEL D P VG Sbjct: 33 RAEYSKLVEDIRHYRFAYYNEAESLVSDAEFDVLFRRLEEIEALHPELISNDSPTQEVG 91 >gi|299820617|ref|ZP_07052507.1| NAD-dependent DNA ligase LigA [Listeria grayi DSM 20601] gi|299818112|gb|EFI85346.1| NAD-dependent DNA ligase LigA [Listeria grayi DSM 20601] Length = 674 Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L++ + YY D+P D +YD+ + L ++E P+ D P VG Sbjct: 5 KKRYEALIEELNQYSYDYYVQDNPSVEDVVYDKAMQELLKIEEAHPDWITVDSPSQRVG 63 >gi|33864448|ref|NP_896008.1| NAD-dependent DNA ligase LigA [Prochlorococcus marinus str. MIT 9313] gi|81576658|sp|Q7V3Z9|DNLJ_PROMM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|33641228|emb|CAE22358.1| NAD-dependent DNA ligase [Prochlorococcus marinus str. MIT 9313] Length = 696 Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 TS++ + E+ L+ A H YY LD P D +YDR+ L L+ + L D Sbjct: 4 TSITPPKRAAELRQLLNQAAH---SYYVLDTPTMEDAVYDRLYRELLNLEAKDSSLLTPD 60 Query: 112 HPWNTVG 118 P +G Sbjct: 61 SPTQRIG 67 >gi|12045108|ref|NP_072919.1| DNA ligase, NAD-dependent [Mycoplasma genitalium G37] gi|1352291|sp|P47496|DNLJ_MYCGE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|3844852|gb|AAC71474.1| DNA ligase, NAD-dependent [Mycoplasma genitalium G37] gi|166078824|gb|ABY79442.1| DNA ligase, NAD-dependent [synthetic Mycoplasma genitalium JCVI-1.0] Length = 659 Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 32/61 (52%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++++ LV + ++ YY L +PL D YD + + L L++ P+L D P V Sbjct: 3 DVKLKIQQLVNLIKNYDYHYYVLSEPLIDDFEYDMLYKSLQQLEKDHPDLIQIDSPTQRV 62 Query: 118 G 118 G Sbjct: 63 G 63 >gi|166032192|ref|ZP_02235021.1| hypothetical protein DORFOR_01895 [Dorea formicigenerans ATCC 27755] gi|166027915|gb|EDR46672.1| hypothetical protein DORFOR_01895 [Dorea formicigenerans ATCC 27755] Length = 690 Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 5/73 (6%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 KK S+S + ++ LVK ++ YY D PL +D YDR+ + L L+EQ Sbjct: 20 PQKKGDSMS----VKRIKNLVKQLNEYRHAYYNQDAPLVSDAEYDRLFDELKELEEQ-TG 74 Query: 107 LFDEDHPWNTVGY 119 + P TVGY Sbjct: 75 FILSNSPTQTVGY 87 >gi|255660255|ref|ZP_05405664.1| DNA ligase, NAD-dependent [Mycoplasma genitalium G37] Length = 658 Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 32/61 (52%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++++ LV + ++ YY L +PL D YD + + L L++ P+L D P V Sbjct: 2 DVKLKIQQLVNLIKNYDYHYYVLSEPLIDDFEYDMLYKSLQQLEKDHPDLIQIDSPTQRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|254465633|ref|ZP_05079044.1| DNA ligase, NAD-dependent [Rhodobacterales bacterium Y4I] gi|206686541|gb|EDZ47023.1| DNA ligase, NAD-dependent [Rhodobacterales bacterium Y4I] Length = 750 Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 34/75 (45%) Query: 44 WLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQ 103 + K VT+L+ +A E L Y++ D P +D YD + +R AL E Sbjct: 2 AENSEKDVTALTAEDARAEFLALEDQLRAADLAYHQADAPEISDAEYDSLKQRYRALAEA 61 Query: 104 FPELFDEDHPWNTVG 118 FP+L D + VG Sbjct: 62 FPDLADAATHLDAVG 76 >gi|322392021|ref|ZP_08065484.1| NAD-dependent DNA ligase LigA [Streptococcus peroris ATCC 700780] gi|321145119|gb|EFX40517.1| NAD-dependent DNA ligase LigA [Streptococcus peroris ATCC 700780] Length = 652 Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 28/58 (48%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV++ + YY D+P +D YDR+ L L++ PE + P + VG Sbjct: 3 ERMNELVELLNRYATEYYTSDNPSVSDSEYDRLYRELVELEQAHPEQVLPNSPTHRVG 60 >gi|315660157|ref|ZP_07913014.1| NAD-dependent DNA ligase LigA [Staphylococcus lugdunensis M23590] gi|315494838|gb|EFU83176.1| NAD-dependent DNA ligase LigA [Staphylococcus lugdunensis M23590] Length = 667 Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 23/57 (40%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V L + + YY D+P D YD++ L ++ PE D P VG Sbjct: 7 RVNELHDLLNQYSYEYYVQDNPSVPDSEYDKLLHELIQIEADHPEYKTTDSPTVRVG 63 >gi|226325717|ref|ZP_03801235.1| hypothetical protein COPCOM_03530 [Coprococcus comes ATCC 27758] gi|225205841|gb|EEG88195.1| hypothetical protein COPCOM_03530 [Coprococcus comes ATCC 27758] Length = 687 Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 5/73 (6%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 KK S+S + ++ LVK ++ YY D PL +D YDR+ + L L+EQ Sbjct: 20 PQKKGDSMS----VKRIKNLVKQLNEYRHAYYNQDAPLVSDAEYDRLFDELKELEEQ-TG 74 Query: 107 LFDEDHPWNTVGY 119 + P TVGY Sbjct: 75 FILSNSPTQTVGY 87 >gi|289550377|ref|YP_003471281.1| DNA ligase [Staphylococcus lugdunensis HKU09-01] gi|289179909|gb|ADC87154.1| DNA ligase [Staphylococcus lugdunensis HKU09-01] Length = 667 Score = 79.5 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 23/57 (40%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V L + + YY D+P D YD++ L ++ PE D P VG Sbjct: 7 RVNELHDLLNQYSYEYYVQDNPSVPDSEYDKLLHELIQIEADHPEYKTTDSPTVRVG 63 >gi|219681449|ref|YP_002467834.1| DNA ligase (NAD+) [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471124|ref|ZP_05635123.1| DNA ligase (NAD+) [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254781271|sp|B8D8M5|DNLJ_BUCA5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219624292|gb|ACL30447.1| DNA ligase (NAD+) [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 675 Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L KI L ++ +Y+ L+ + +D YD + +L L+ + EL D P VG Sbjct: 5 KDKIEKLRKILLKYEYFYHTLNQSIISDAEYDYLFRQLYELELKHKELIPSDSPTQKVG 63 >gi|162448184|ref|YP_001621316.1| DNA ligase [Acholeplasma laidlawii PG-8A] gi|190359222|sp|A9NHW0|DNLJ_ACHLI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|161986291|gb|ABX81940.1| DNA ligase, NAD-dependent [Acholeplasma laidlawii PG-8A] Length = 659 Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 28/61 (45%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++ L K Y+ D P+ +D +YD + L L+ ++PE DE P + Sbjct: 2 DIQTRIKELRKQINEANYLYHTKDQPIISDFVYDGLMRELIELETKYPEYDDETSPTKKI 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|322389291|ref|ZP_08062851.1| NAD-dependent DNA ligase LigA [Streptococcus parasanguinis ATCC 903] gi|321144035|gb|EFX39453.1| NAD-dependent DNA ligase LigA [Streptococcus parasanguinis ATCC 903] Length = 652 Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV++ + YY D P +D YD++ L L+ P+ + P + VG Sbjct: 2 KTRMKELVELLNRYAYEYYTKDAPSVSDSEYDQLYRELVELETAHPDEILPESPTHRVG 60 >gi|322411466|gb|EFY02374.1| NAD-dependent DNA ligase LigA [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 652 Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + + ++ +++ YY D P +D YD++ L L+ Q+PE +D P VG Sbjct: 2 KKRIREVTELLNRYRQEYYTNDSPSVSDSEYDKLYRELVELENQYPEHVLQDSPTQNVG 60 >gi|15900984|ref|NP_345588.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae TIGR4] gi|81531953|sp|Q97QT2|DNLJ_STRPN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|14972593|gb|AAK75228.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae TIGR4] Length = 652 Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 3 KRMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|227503896|ref|ZP_03933945.1| NAD-dependent DNA ligase LigA [Corynebacterium striatum ATCC 6940] gi|227199519|gb|EEI79567.1| NAD-dependent DNA ligase LigA [Corynebacterium striatum ATCC 6940] Length = 680 Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + + L + H++ YY +P D +D + +RL L+ + PEL D P V Sbjct: 12 DIQRKWSELAQEVRKHRELYY-NGEPSIPDADFDELFQRLLKLEAEHPELAVPDSPTQQV 70 Query: 118 G 118 G Sbjct: 71 G 71 >gi|77414096|ref|ZP_00790264.1| DNA ligase, NAD-dependent [Streptococcus agalactiae 515] gi|77159848|gb|EAO70991.1| DNA ligase, NAD-dependent [Streptococcus agalactiae 515] Length = 648 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 29/56 (51%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + K YY D+P +D YD++ L L+EQ PE + P + VG Sbjct: 1 MNELVSLLNQYAKEYYTQDNPTVSDSQYDQLYRELVELEEQHPENILPNSPTHRVG 56 >gi|46447394|ref|YP_008759.1| NAD-dependent DNA ligase LigA [Candidatus Protochlamydia amoebophila UWE25] gi|81626502|sp|Q6MAB5|DNLJ_PARUW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|46401035|emb|CAF24484.1| probable DNA ligase [Candidatus Protochlamydia amoebophila UWE25] Length = 665 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E L HH K YY P+ +D +D + ++L+ ++ PE E P V Sbjct: 7 YEKLCHEIWHHNKLYYIEHQPIISDEEFDALLKKLEEIERSHPEWITEFSPSQRV 61 >gi|149372321|ref|ZP_01891509.1| putative DNA ligase [unidentified eubacterium SCB49] gi|149354711|gb|EDM43274.1| putative DNA ligase [unidentified eubacterium SCB49] Length = 677 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 29/60 (48%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L + + YY LD+ +D +D+ + L L++ PE FD + P VG Sbjct: 3 IEQQIKELREELRAYNYQYYVLDNATVSDFEFDQKLKELQQLEDAHPEYFDANSPTQRVG 62 >gi|185178794|ref|ZP_02554752.2| DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024241|ref|ZP_02569990.2| DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518556|ref|ZP_03004016.1| DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|209554205|ref|YP_002284543.1| DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225551582|ref|ZP_03772528.1| DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|254781448|sp|B5ZAV3|DNLJ_UREU1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|184209414|gb|EDU06457.1| DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018900|gb|EDU56940.1| DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997873|gb|EDU66970.1| DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|209541706|gb|ACI59935.1| DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379397|gb|EEH01762.1| DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 8 str. ATCC 27618] Length = 673 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 25/62 (40%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L + YY LDDP D +YD+ L L+ +P+ + P Sbjct: 2 DRIKAKINELKQKLDQWNYEYYVLDDPSVPDHVYDQAMRELIELENAYPQFKTNNSPSVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|88800009|ref|ZP_01115580.1| DNA ligase, NAD-dependent [Reinekea sp. MED297] gi|88777287|gb|EAR08491.1| DNA ligase, NAD-dependent [Reinekea sp. MED297] Length = 674 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 25/60 (41%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + L++ + YY L++ D YDR+ E L ++ + P+ P V Sbjct: 3 ELHDRYQALIQQIRRYDHEYYVLNESAIPDVEYDRLMEELKRIESEHPQWVTPQSPTQRV 62 >gi|225550545|ref|ZP_03771494.1| DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225379699|gb|EEH02061.1| DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 673 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 25/62 (40%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L + YY LDDP D +YD+ L L+ +P+ + P Sbjct: 2 DRIKAKINELKQKLDQWNYEYYVLDDPSVPDHVYDQAMRELIELENAYPQFKTNNSPSVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|171920530|ref|ZP_02695360.2| DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|171903225|gb|EDT49514.1| DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 13 str. ATCC 33698] Length = 673 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 25/62 (40%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L + YY LDDP D +YD+ L L+ +P+ + P Sbjct: 2 DRIKAKINELKQKLDQWNYEYYVLDDPSVPDHVYDQAMRELIELENAYPQFKTNNSPSVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|195977913|ref|YP_002123157.1| NAD-dependent DNA ligase LigA [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|254781421|sp|B4U2C7|DNLJ_STREM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|195974618|gb|ACG62144.1| DNA ligase LigA [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 652 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + +++ YY D P +D YD++ L L++ +P +D P VG Sbjct: 2 KKRIRELTDLLNQYRQEYYTNDAPSVSDSEYDKLYRELVELEQTYPAYILKDSPTQLVG 60 >gi|255535523|ref|YP_003095894.1| DNA ligase [Flavobacteriaceae bacterium 3519-10] gi|255341719|gb|ACU07832.1| DNA ligase [Flavobacteriaceae bacterium 3519-10] Length = 667 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 30/63 (47%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 +++ L K H YY LD+P +D +D + L L+ QFPE +D + P Sbjct: 2 PENIQQKIDALRKEIHQHNYSYYSLDEPTISDFEFDLKLKELQDLELQFPEFYDNNSPTL 61 Query: 116 TVG 118 VG Sbjct: 62 RVG 64 >gi|188524111|ref|ZP_03004188.1| DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198273308|ref|ZP_03205844.1| DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|195659974|gb|EDX53354.1| DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198249828|gb|EDY74608.1| DNA ligase, NAD-dependent [Ureaplasma urealyticum serovar 4 str. ATCC 27816] Length = 673 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 25/62 (40%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 ++ L + YY LDDP D +YD+ L L+ +P+ + P Sbjct: 2 DRIKAKINELKQKLDQWNYEYYVLDDPSVPDHVYDQAMRELIELENAYPQFKTNNSPSVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|225868755|ref|YP_002744703.1| DNA ligase [Streptococcus equi subsp. zooepidemicus] gi|225702031|emb|CAW99626.1| DNA ligase [Streptococcus equi subsp. zooepidemicus] Length = 652 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + +++ YY D P +D YD++ L L++ +P +D P VG Sbjct: 2 KKRIRELTDLLNQYRQEYYTNDAPSVSDSEYDKLYRELVELEQTYPAYILKDSPTQLVG 60 >gi|169834268|ref|YP_001694538.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae Hungary19A-6] gi|254781426|sp|B1IBQ3|DNLJ_STRPI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|168996770|gb|ACA37382.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae Hungary19A-6] Length = 652 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 3 KRMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|149012887|ref|ZP_01833800.1| DNA ligase [Streptococcus pneumoniae SP19-BS75] gi|182684133|ref|YP_001835880.1| DNA ligase [Streptococcus pneumoniae CGSP14] gi|254781428|sp|B2IPZ1|DNLJ_STRPS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|147763176|gb|EDK70116.1| DNA ligase [Streptococcus pneumoniae SP19-BS75] gi|182629467|gb|ACB90415.1| DNA ligase [Streptococcus pneumoniae CGSP14] gi|301801994|emb|CBW34723.1| DNA ligase [Streptococcus pneumoniae INV200] Length = 652 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 3 KRMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|325125239|gb|ADY84569.1| DNA ligase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 671 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 26/64 (40%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S EA EV L K YY D P+ D +YD RL L+ + EL D Sbjct: 4 SLEEAKQEVRQLRAQLDQWAKAYYEQDAPVVEDHVYDEKYARLLELEAAYSELKSADSIT 63 Query: 115 NTVG 118 VG Sbjct: 64 QRVG 67 >gi|168486469|ref|ZP_02710977.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae CDC1087-00] gi|183570508|gb|EDT91036.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae CDC1087-00] Length = 652 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 3 KRMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|149024919|ref|ZP_01836320.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP23-BS72] gi|303259779|ref|ZP_07345754.1| DNA ligase [Streptococcus pneumoniae SP-BS293] gi|303262954|ref|ZP_07348889.1| DNA ligase [Streptococcus pneumoniae SP14-BS292] gi|303264916|ref|ZP_07350832.1| DNA ligase [Streptococcus pneumoniae BS397] gi|303266897|ref|ZP_07352775.1| DNA ligase [Streptococcus pneumoniae BS457] gi|303268933|ref|ZP_07354718.1| DNA ligase [Streptococcus pneumoniae BS458] gi|147929542|gb|EDK80536.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP23-BS72] gi|301794230|emb|CBW36650.1| DNA ligase [Streptococcus pneumoniae INV104] gi|302635931|gb|EFL66431.1| DNA ligase [Streptococcus pneumoniae SP14-BS292] gi|302638984|gb|EFL69444.1| DNA ligase [Streptococcus pneumoniae SP-BS293] gi|302641551|gb|EFL71913.1| DNA ligase [Streptococcus pneumoniae BS458] gi|302643595|gb|EFL73864.1| DNA ligase [Streptococcus pneumoniae BS457] gi|302645604|gb|EFL75835.1| DNA ligase [Streptococcus pneumoniae BS397] Length = 652 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 3 KRMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|148994566|ref|ZP_01823725.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP9-BS68] gi|168488962|ref|ZP_02713161.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP195] gi|147927160|gb|EDK78197.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP9-BS68] gi|183572496|gb|EDT93024.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP195] gi|332073479|gb|EGI83958.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae GA17570] Length = 652 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 3 KRMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|163757008|ref|ZP_02164114.1| DNA ligase [Kordia algicida OT-1] gi|161323012|gb|EDP94355.1| DNA ligase [Kordia algicida OT-1] Length = 665 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L H YY LD+ +D +D + L L+ + PE D + P VG Sbjct: 4 IQEKLTALRDELREHNYNYYVLDNATISDYEFDMKLKELQELEAKHPEFHDPNSPTLRVG 63 >gi|148986045|ref|ZP_01819066.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP3-BS71] gi|147921879|gb|EDK73005.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP3-BS71] gi|301800082|emb|CBW32679.1| DNA ligase [Streptococcus pneumoniae OXC141] Length = 652 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 3 KRMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|149003762|ref|ZP_01828594.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP14-BS69] gi|237650785|ref|ZP_04525037.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae CCRI 1974] gi|237822373|ref|ZP_04598218.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae CCRI 1974M2] gi|147758208|gb|EDK65210.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP14-BS69] Length = 652 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 3 KRMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|225858927|ref|YP_002740437.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae 70585] gi|254781425|sp|C1C7B1|DNLJ_STRP7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|225720821|gb|ACO16675.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae 70585] Length = 652 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 3 KRMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|327474802|gb|EGF20207.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK408] Length = 652 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV++ + YY D P +D YDR+ L L++++P D P + VG Sbjct: 2 KERMSELVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEKKYPTDILPDSPTHRVG 60 >gi|148998387|ref|ZP_01825829.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP11-BS70] gi|168576158|ref|ZP_02722052.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae MLV-016] gi|194398076|ref|YP_002037745.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae G54] gi|225861080|ref|YP_002742589.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae Taiwan19F-14] gi|298230922|ref|ZP_06964603.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254162|ref|ZP_06977748.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502866|ref|YP_003724806.1| DNA ligase (NAD(+)) [Streptococcus pneumoniae TCH8431/19A] gi|254781424|sp|B5E4M9|DNLJ_STRP4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781433|sp|C1CRL7|DNLJ_STRZT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|147755784|gb|EDK62829.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP11-BS70] gi|183577935|gb|EDT98463.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae MLV-016] gi|194357743|gb|ACF56191.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae G54] gi|225727034|gb|ACO22885.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae Taiwan19F-14] gi|298238461|gb|ADI69592.1| DNA ligase (NAD(+)) [Streptococcus pneumoniae TCH8431/19A] gi|327389325|gb|EGE87670.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae GA04375] gi|332075071|gb|EGI85542.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae GA17545] Length = 652 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 3 KRMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|222152820|ref|YP_002561997.1| NAD-dependent DNA ligase LigA [Streptococcus uberis 0140J] gi|254781430|sp|B9DRS2|DNLJ_STRU0 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|222113633|emb|CAR41520.1| DNA ligase [Streptococcus uberis 0140J] Length = 652 Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + +++ YY D+P +D YD++ L L++++PE +D P VG Sbjct: 2 EKRIRELTSLLNQYRQEYYTNDNPSVSDQEYDKLYHELIDLEKEYPEYIQKDSPSQAVG 60 >gi|149006206|ref|ZP_01829918.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP18-BS74] gi|225856757|ref|YP_002738268.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae P1031] gi|307127352|ref|YP_003879383.1| NAD-dependent DNA ligase [Streptococcus pneumoniae 670-6B] gi|254781432|sp|C1CKI0|DNLJ_STRZP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|147761983|gb|EDK68945.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae SP18-BS74] gi|225725530|gb|ACO21382.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae P1031] gi|306484414|gb|ADM91283.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae 670-6B] gi|332075451|gb|EGI85920.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae GA41301] Length = 652 Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 3 KRMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|15903068|ref|NP_358618.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae R6] gi|116516470|ref|YP_816476.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae D39] gi|81449679|sp|Q8DPS9|DNLJ_STRR6 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|122278638|sp|Q04KH2|DNLJ_STRP2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|15458641|gb|AAK99828.1| DNA ligase [Streptococcus pneumoniae R6] gi|116077046|gb|ABJ54766.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae D39] Length = 652 Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 3 KRMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|153853203|ref|ZP_01994612.1| hypothetical protein DORLON_00597 [Dorea longicatena DSM 13814] gi|149753989|gb|EDM63920.1| hypothetical protein DORLON_00597 [Dorea longicatena DSM 13814] Length = 692 Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 5/73 (6%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 KK S+S + ++ LVK ++ YY D PL +D YDR+ ++L L+EQ Sbjct: 20 PQKKGDSMS----IKRIKNLVKQLNEYRHAYYNQDAPLVSDAEYDRLFDKLKKLEEQ-TG 74 Query: 107 LFDEDHPWNTVGY 119 + P TVGY Sbjct: 75 FILSNSPTQTVGY 87 >gi|42521704|ref|NP_967084.1| DNA ligase [Bdellovibrio bacteriovorus HD100] gi|81618744|sp|Q6MRL9|DNLJ_BDEBA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|39574234|emb|CAE77738.1| DNA ligase [Bdellovibrio bacteriovorus HD100] Length = 684 Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + E L KI H Y+ LD P TD YD++ L +++ L D P VG Sbjct: 20 SKKRHEELKKIISEHDHNYHVLDKPTITDYEYDQLFAELLDIEKNPKGLDLSDSPSQRVG 79 >gi|257793288|ref|ZP_05642267.1| DNA ligase, NAD-dependent [Staphylococcus aureus A9781] gi|257787260|gb|EEV25600.1| DNA ligase, NAD-dependent [Staphylococcus aureus A9781] Length = 245 Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + V L + + YY D+P D YD++ L ++E+ PE D P Sbjct: 2 ADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|225870290|ref|YP_002746237.1| DNA ligase [Streptococcus equi subsp. equi 4047] gi|254781420|sp|C0M6L2|DNLJ_STRE4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|225699694|emb|CAW93413.1| DNA ligase [Streptococcus equi subsp. equi 4047] Length = 652 Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + +++ YY D P +D YD++ L L++ +P +D P VG Sbjct: 2 KKRIRELTDLLNQYRQEYYTNDAPSVSDSEYDKLYRELVELEQTYPAYILKDSPTQLVG 60 >gi|212715716|ref|ZP_03323844.1| hypothetical protein BIFCAT_00616 [Bifidobacterium catenulatum DSM 16992] gi|212661083|gb|EEB21658.1| hypothetical protein BIFCAT_00616 [Bifidobacterium catenulatum DSM 16992] Length = 891 Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 29/69 (42%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V+S+S A + Q YY D P+ +D YD L AL+ QFP L Sbjct: 64 DVSSMSAEAAARLWARVAAWVESDQIAYYIDDAPVSSDAAYDARMRCLQALEAQFPSLDS 123 Query: 110 EDHPWNTVG 118 P + VG Sbjct: 124 TQSPTHRVG 132 >gi|116513594|ref|YP_812500.1| NAD-dependent DNA ligase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275636|sp|Q04BW0|DNLJ_LACDB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116092909|gb|ABJ58062.1| NAD-dependent DNA ligase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 671 Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 26/64 (40%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S EA EV L K YY D P+ D +YD RL L+ + EL D Sbjct: 4 SLEEAKQEVRQLRAQLDQWAKAYYEQDAPVVEDHVYDEKYARLLELEAAYSELKSADSIT 63 Query: 115 NTVG 118 VG Sbjct: 64 QRVG 67 >gi|251799680|ref|YP_003014411.1| NAD-dependent DNA ligase LigA [Paenibacillus sp. JDR-2] gi|247547306|gb|ACT04325.1| DNA ligase, NAD-dependent [Paenibacillus sp. JDR-2] Length = 677 Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + ++ L H YY LD P D YD++ + L AL+ + D P V Sbjct: 9 EQLTRMQELAAEISAHNYSYYTLDQPTINDADYDKLYDELVALEAD-TGVVLPDSPTQRV 67 Query: 118 G 118 G Sbjct: 68 G 68 >gi|22537014|ref|NP_687865.1| NAD-dependent DNA ligase LigA [Streptococcus agalactiae 2603V/R] gi|81454504|sp|Q8E084|DNLJ_STRA5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|22533870|gb|AAM99737.1|AE014230_17 DNA ligase, NAD-dependent [Streptococcus agalactiae 2603V/R] Length = 652 Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + K YY D+P +D YD++ L L++Q PE + P + VG Sbjct: 2 ENRMNELVSLLNQYAKEYYTQDNPTVSDSQYDQLYRELVELEKQHPENILPNSPTHRVG 60 >gi|76787534|ref|YP_329595.1| NAD-dependent DNA ligase LigA [Streptococcus agalactiae A909] gi|123771969|sp|Q3K1K8|DNLJ_STRA1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|76562591|gb|ABA45175.1| DNA ligase, NAD-dependent [Streptococcus agalactiae A909] Length = 652 Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + K YY D+P +D YD++ L L++Q PE + P + VG Sbjct: 2 ENRMNELVSLLNQYAKEYYTQDNPTVSDSQYDQLYRELVELEKQHPENILPNSPTHRVG 60 >gi|328954073|ref|YP_004371407.1| DNA ligase [Desulfobacca acetoxidans DSM 11109] gi|328454397|gb|AEB10226.1| DNA ligase [Desulfobacca acetoxidans DSM 11109] Length = 676 Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E L +H YY LDDP +D YD + L+ L+E++PEL D P V Sbjct: 10 EIAARAARLRDQIHYHDYRYYVLDDPEISDAEYDLLFRELERLEEEYPELVTPDSPTQRV 69 Query: 118 G 118 G Sbjct: 70 G 70 >gi|256785054|ref|ZP_05523485.1| NAD-dependent DNA ligase LigA [Streptomyces lividans TK24] gi|289768947|ref|ZP_06528325.1| DNA ligase, NAD-dependent [Streptomyces lividans TK24] gi|289699146|gb|EFD66575.1| DNA ligase, NAD-dependent [Streptomyces lividans TK24] Length = 735 Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 29/62 (46%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 EA L + H+ YY D P+ +D +DR+ L+ L+E+ PEL + P Sbjct: 17 PAEARERHAQLAEQIEEHRFRYYVNDAPVVSDAEFDRLLRTLEELEERHPELRTPESPTQ 76 Query: 116 TV 117 V Sbjct: 77 KV 78 >gi|213964541|ref|ZP_03392741.1| DNA ligase, NAD-dependent [Corynebacterium amycolatum SK46] gi|213952734|gb|EEB64116.1| DNA ligase, NAD-dependent [Corynebacterium amycolatum SK46] Length = 703 Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 + + + + + L + YY P+ +D YD + +L L+EQ+P+L Sbjct: 23 PASEPAPADVREKWQELATRIRDNAALYYTA-QPVISDAEYDEMFRQLQQLEEQWPDLVV 81 Query: 110 EDHPWNTVG 118 D P VG Sbjct: 82 PDSPTQQVG 90 >gi|124024594|ref|YP_001018901.1| NAD-dependent DNA ligase LigA [Prochlorococcus marinus str. MIT 9303] gi|166216228|sp|A2CDS6|DNLJ_PROM3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|123964880|gb|ABM79636.1| NAD-dependent DNA ligase [Prochlorococcus marinus str. MIT 9303] Length = 696 Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 TS + E E+ L+ A H YY LD P D +YDR+ L L+ + L D Sbjct: 4 TSRTPPERAAELRQLLNQAAH---SYYVLDTPTMEDAVYDRLYRELLDLEVKDSSLLTPD 60 Query: 112 HPWNTVG 118 P +G Sbjct: 61 SPTQRIG 67 >gi|281307118|pdb|3JSL|A Chain A, Crystal Structure Of The Adenylation Domain Of Nad+- Dependent Dna Ligase From Staphylococcus Aureus gi|281307119|pdb|3JSL|B Chain B, Crystal Structure Of The Adenylation Domain Of Nad+- Dependent Dna Ligase From Staphylococcus Aureus gi|281307120|pdb|3JSN|A Chain A, Crystal Structure Of The Adenylation Domain Of Nad+- Dependent Dna Ligase From Staphylococcus Aureus Length = 318 Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + V L + + YY D+P D YD++ L ++E+ PE D P Sbjct: 2 ADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTVR 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|21223850|ref|NP_629629.1| NAD-dependent DNA ligase LigA [Streptomyces coelicolor A3(2)] gi|7674017|sp|Q9Z585|DNLJ1_STRCO RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 1 gi|4467245|emb|CAB37570.1| putative DNA ligase [Streptomyces coelicolor A3(2)] Length = 735 Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 29/62 (46%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 EA L + H+ YY D P+ +D +DR+ L+ L+E+ PEL + P Sbjct: 17 PAEARERHAQLAEQIEEHRFRYYVNDAPVVSDAEFDRLLRTLEELEERHPELRTPESPTQ 76 Query: 116 TV 117 V Sbjct: 77 KV 78 >gi|56962859|ref|YP_174586.1| NAD-dependent DNA ligase LigA [Bacillus clausii KSM-K16] gi|81366743|sp|Q5WJ30|DNLJ_BACSK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|56909098|dbj|BAD63625.1| DNA ligase [Bacillus clausii KSM-K16] Length = 671 Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K +A ++ L + + YY LD P D YDR+ L L+ +P+L ED P Sbjct: 1 MDKHQAEKRLKELRLLLEDYGYHYYVLDTPKVPDSEYDRLMNELLQLEADYPDLVTEDSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 SVRIG 65 >gi|306825169|ref|ZP_07458511.1| NAD-dependent DNA ligase LigA [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432605|gb|EFM35579.1| NAD-dependent DNA ligase LigA [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 652 Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +P+ D P + VG Sbjct: 3 ERMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELEAAYPDQVLADSPTHRVG 60 >gi|111658008|ref|ZP_01408712.1| hypothetical protein SpneT_02000805 [Streptococcus pneumoniae TIGR4] Length = 648 Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 1 MNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 56 >gi|145295383|ref|YP_001138204.1| NAD-dependent DNA ligase LigA [Corynebacterium glutamicum R] gi|166215581|sp|A4QDK5|DNLJ_CORGB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|140845303|dbj|BAF54302.1| hypothetical protein [Corynebacterium glutamicum R] Length = 680 Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Query: 54 LSKGEAMIE--VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 +++ A + L + +H+ YY P D +D + ++L L+E PEL D Sbjct: 1 MTEDNAQLRRTWNDLAEKVRYHRDRYYNE-QPEIPDADFDALFKQLQQLEEDHPELAVPD 59 Query: 112 HPWNTVG 118 P VG Sbjct: 60 SPTMVVG 66 >gi|19552465|ref|NP_600467.1| NAD-dependent DNA ligase LigA [Corynebacterium glutamicum ATCC 13032] gi|62390131|ref|YP_225533.1| NAD-dependent DNA ligase LigA [Corynebacterium glutamicum ATCC 13032] gi|81760918|sp|Q8NR20|DNLJ_CORGL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|21324011|dbj|BAB98637.1| NAD-dependent DNA ligase (contains BRCT domain type II) [Corynebacterium glutamicum ATCC 13032] gi|41325467|emb|CAF19947.1| DNA LIGASE [Corynebacterium glutamicum ATCC 13032] Length = 680 Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Query: 54 LSKGEAMIE--VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 +++ A + L + +H+ YY P D +D + ++L L+E PEL D Sbjct: 1 MTEDNAQLRRTWNDLAEKVRYHRDRYYNE-QPEIPDADFDALFKQLQQLEEDHPELAVPD 59 Query: 112 HPWNTVG 118 P VG Sbjct: 60 SPTMVVG 66 >gi|157150014|ref|YP_001450670.1| NAD-dependent DNA ligase LigA [Streptococcus gordonii str. Challis substr. CH1] gi|190359295|sp|A8AY10|DNLJ_STRGC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157074808|gb|ABV09491.1| DNA ligase, NAD-dependent [Streptococcus gordonii str. Challis substr. CH1] Length = 652 Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D P +D YD++ L +L+EQ+P + P + VG Sbjct: 2 KDRMSELVSLLNRYAHEYYTKDAPSVSDSEYDQLYRELVSLEEQYPNEILPESPTHRVG 60 >gi|294054681|ref|YP_003548339.1| DNA ligase, NAD-dependent [Coraliomargarita akajimensis DSM 45221] gi|293614014|gb|ADE54169.1| DNA ligase, NAD-dependent [Coraliomargarita akajimensis DSM 45221] Length = 711 Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L H + YY+ P D YDR+ RL AL+ Q PEL P TVG Sbjct: 54 KEIAQLRAAIEKHDRLYYKKAQPEIDDQAYDRLKARLTALESQNPELDFGSSPTQTVG 111 >gi|262282968|ref|ZP_06060735.1| NAD-dependent DNA ligase LigA [Streptococcus sp. 2_1_36FAA] gi|262261220|gb|EEY79919.1| NAD-dependent DNA ligase LigA [Streptococcus sp. 2_1_36FAA] Length = 652 Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 28/59 (47%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D P +D YD++ L +L+EQ+P + P + VG Sbjct: 2 KDRMSELVSLLNRYAHEYYTKDAPSVSDSEYDQLYRELVSLEEQYPNEILPESPTHRVG 60 >gi|113954059|ref|YP_731994.1| NAD-dependent DNA ligase LigA [Synechococcus sp. CC9311] gi|122945488|sp|Q0I6C8|DNLJ_SYNS3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|113881410|gb|ABI46368.1| DNA ligase, NAD-dependent [Synechococcus sp. CC9311] Length = 697 Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 24/58 (41%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L ++ YY LD P D +YD++ L L+ Q L D P VG Sbjct: 15 ERAEELRRLLNRAAHAYYVLDAPDMEDPVYDQLYRELQDLEHQDSTLVSADSPTQRVG 72 >gi|322375289|ref|ZP_08049802.1| DNA ligase, NAD-dependent [Streptococcus sp. C300] gi|321279552|gb|EFX56592.1| DNA ligase, NAD-dependent [Streptococcus sp. C300] Length = 652 Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +P+ D P + VG Sbjct: 3 ERMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELEAAYPDQVLADSPTHRVG 60 >gi|119025970|ref|YP_909815.1| LigA [Bifidobacterium adolescentis ATCC 15703] gi|166215398|sp|A1A200|DNLJ_BIFAA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|118765554|dbj|BAF39733.1| LigA [Bifidobacterium adolescentis ATCC 15703] Length = 892 Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 28/69 (40%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V S+S A + Q YY D P+ +D YD L +L+ QFP L Sbjct: 62 DVASMSAEAAARLWARVAAWVESDQIAYYIDDAPVSSDAAYDARLRCLQSLEAQFPSLDS 121 Query: 110 EDHPWNTVG 118 P + VG Sbjct: 122 PQSPTHRVG 130 >gi|154488672|ref|ZP_02029521.1| hypothetical protein BIFADO_01979 [Bifidobacterium adolescentis L2-32] gi|154082809|gb|EDN81854.1| hypothetical protein BIFADO_01979 [Bifidobacterium adolescentis L2-32] Length = 890 Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 28/69 (40%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V S+S A + Q YY D P+ +D YD L +L+ QFP L Sbjct: 60 DVASMSAEAAARLWARVAAWVESDQIAYYIDDAPVSSDAAYDARLRCLQSLEAQFPSLDS 119 Query: 110 EDHPWNTVG 118 P + VG Sbjct: 120 PQSPTHRVG 128 >gi|307067701|ref|YP_003876667.1| NAD-dependent DNA ligase (contains BRCT domain type II) [Streptococcus pneumoniae AP200] gi|306409238|gb|ADM84665.1| NAD-dependent DNA ligase (contains BRCT domain type II) [Streptococcus pneumoniae AP200] Length = 648 Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 1 MNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 56 >gi|330444629|ref|YP_004377615.1| DNA ligase [Chlamydophila pecorum E58] gi|328807739|gb|AEB41912.1| DNA ligase, NAD-dependent [Chlamydophila pecorum E58] Length = 666 Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 22/54 (40%) Query: 65 YLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + H YY L PL +D YD L +++Q PE P +G Sbjct: 16 ELCQELEKHDYQYYVLHAPLISDYDYDMKMRELQLIEKQHPEWRVPWSPTLRLG 69 >gi|331266328|ref|YP_004325958.1| DNA ligase, NAD-dependent [Streptococcus oralis Uo5] gi|326683000|emb|CBZ00617.1| DNA ligase, NAD-dependent [Streptococcus oralis Uo5] Length = 652 Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +P+ D P + VG Sbjct: 3 ERMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELEAAYPDQVLADSPTHRVG 60 >gi|86131748|ref|ZP_01050345.1| DNA ligase (NAD(+)) [Dokdonia donghaensis MED134] gi|85817570|gb|EAQ38744.1| DNA ligase (NAD(+)) [Dokdonia donghaensis MED134] Length = 664 Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ E ++ L + H YY LD P +D +D+ E+L AL+ P D + P Sbjct: 1 MTIEE---QILQLRQELREHNYNYYTLDTPTISDFEFDKKLEQLKALELANPAYDDPNSP 57 Query: 114 WNTVG 118 + VG Sbjct: 58 THRVG 62 >gi|313884866|ref|ZP_07818618.1| DNA ligase (NAD+) [Eremococcus coleocola ACS-139-V-Col8] gi|312619557|gb|EFR30994.1| DNA ligase (NAD+) [Eremococcus coleocola ACS-139-V-Col8] Length = 673 Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 4/70 (5%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K++ ++ + + L + YY LD P D +YD++ +L+ L++ P+ Sbjct: 2 KEIKEMTLDD----YQDLKEQLNQLAYAYYVLDKPQAEDAVYDQMYRQLENLEKIHPDWL 57 Query: 109 DEDHPWNTVG 118 D P +G Sbjct: 58 SPDSPTQRIG 67 >gi|281490961|ref|YP_003352941.1| NAD-dependent DNA ligase [Lactococcus lactis subsp. lactis KF147] gi|281374719|gb|ADA64239.1| NAD-dependent DNA ligase [Lactococcus lactis subsp. lactis KF147] Length = 654 Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L + + YY LD+P D YDR+ + L L+ + P+L D P + G Sbjct: 3 IESKIKELTEKLNQYAYEYYTLDEPSVEDSEYDRLYQELVKLEAENPQLTRADSPTHRTG 62 >gi|15672401|ref|NP_266575.1| NAD-dependent DNA ligase LigA [Lactococcus lactis subsp. lactis Il1403] gi|81538437|sp|Q9CIE4|DNLJ_LACLA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|12723294|gb|AAK04517.1|AE006278_8 DNA ligase [Lactococcus lactis subsp. lactis Il1403] gi|326405996|gb|ADZ63067.1| NAD-dependent DNA ligase [Lactococcus lactis subsp. lactis CV56] Length = 654 Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L + + YY LD+P D YDR+ + L L+ + P+L D P + G Sbjct: 3 IESKIKELTEKLNQYAYEYYTLDEPSVEDSEYDRLYQELVKLEAENPQLTRADSPTHRTG 62 >gi|171920195|ref|ZP_02931577.1| DNA ligase, NAD-dependent [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171902576|gb|EDT48865.1| DNA ligase, NAD-dependent [Ureaplasma parvum serovar 1 str. ATCC 27813] Length = 673 Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +++ L + YY LDDP D +YD+ L L+ +P+ + P Sbjct: 2 DKIKAKIDELKQKLDQWNYEYYVLDDPSVPDHVYDQTMRELIELENNYPQFKTNNSPSVK 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|154507531|ref|ZP_02043173.1| hypothetical protein ACTODO_00010 [Actinomyces odontolyticus ATCC 17982] gi|153799320|gb|EDN81740.1| hypothetical protein ACTODO_00010 [Actinomyces odontolyticus ATCC 17982] Length = 777 Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 29/69 (42%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 + + LV + YY D P D YDR+ ++ ++E++P+L Sbjct: 3 PMADSTFETTRDRYNDLVDRINEARAAYYDRDSPTLADADYDRMYREVEEIEERYPQLRG 62 Query: 110 EDHPWNTVG 118 D P +VG Sbjct: 63 ADSPTMSVG 71 >gi|78485583|ref|YP_391508.1| DNA ligase, NAD-dependent [Thiomicrospira crunogena XCL-2] gi|123741582|sp|Q31G89|DNLJ_THICR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|78363869|gb|ABB41834.1| DNA ligase, NAD-dependent [Thiomicrospira crunogena XCL-2] Length = 672 Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 30/56 (53%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV+ H YY LDDP+ +D YD + ++L ++++ P+ + P +G Sbjct: 7 YQKLVESLNQHSYQYYVLDDPIISDPQYDVLYQKLLRIEDEHPDWILPESPSQRIG 62 >gi|13357678|ref|NP_077952.1| DNA ligase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762219|ref|YP_001752204.1| DNA ligase, NAD-dependent [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|183508850|ref|ZP_02958298.1| DNA ligase, NAD-dependent [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|81549679|sp|Q9PR23|DNLJ_UREPA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781447|sp|B1AIB0|DNLJ_UREP2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|11272940|pir||F82930 DNA ligase UU121 [imported] - Ureaplasma urealyticum gi|6899079|gb|AAF30527.1|AE002113_1 DNA ligase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827796|gb|ACA33058.1| DNA ligase, NAD-dependent [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|182675825|gb|EDT87730.1| DNA ligase, NAD-dependent [Ureaplasma parvum serovar 14 str. ATCC 33697] Length = 673 Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +++ L + YY LDDP D +YD+ L L+ +P+ + P Sbjct: 2 DKIKAKIDELKQKLDQWNYEYYVLDDPSVPDHVYDQTMRELIELENNYPQFKTNNSPSVK 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|186701986|ref|ZP_02554435.2| DNA ligase, NAD-dependent [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|186700761|gb|EDU19043.1| DNA ligase, NAD-dependent [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 673 Score = 78.0 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + +++ L + YY LDDP D +YD+ L L+ +P+ + P Sbjct: 2 DKIKAKIDELKQKLDQWNYEYYVLDDPSVPDHVYDQTMRELIELENNYPQFKTNNSPSVK 61 Query: 117 VG 118 VG Sbjct: 62 VG 63 >gi|315613211|ref|ZP_07888121.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis ATCC 49296] gi|315314773|gb|EFU62815.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis ATCC 49296] Length = 652 Score = 77.6 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +P+ D P + VG Sbjct: 3 ERMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELEAAYPDQVLADSPTHRVG 60 >gi|171463268|ref|YP_001797381.1| DNA ligase, NAD-dependent [Polynucleobacter necessarius subsp. necessarius STIR1] gi|254781389|sp|B1XTU0|DNLJ_POLNS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|171192806|gb|ACB43767.1| DNA ligase, NAD-dependent [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 671 Score = 77.6 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 23/59 (38%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L + YY LD+PL D YDR+ L ++ PE + VG Sbjct: 10 AERYAFLQAELARLEHAYYVLDNPLLPDIEYDRLYRELLDIEAVHPEWVTSESLSQRVG 68 >gi|296876694|ref|ZP_06900742.1| NAD-dependent DNA ligase LigA [Streptococcus parasanguinis ATCC 15912] gi|296432196|gb|EFH17995.1| NAD-dependent DNA ligase LigA [Streptococcus parasanguinis ATCC 15912] Length = 652 Score = 77.6 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV++ + YY D P +D YD++ L L+ P+ + P + VG Sbjct: 2 KTRMKELVELLNRYAYEYYTKDTPSVSDSEYDQLYRELVELETAHPDEILPESPTHRVG 60 >gi|312867643|ref|ZP_07727849.1| DNA ligase (NAD+) [Streptococcus parasanguinis F0405] gi|311096706|gb|EFQ54944.1| DNA ligase (NAD+) [Streptococcus parasanguinis F0405] Length = 652 Score = 77.6 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV++ + YY D P +D YD++ L L+ P+ + P + VG Sbjct: 2 KTRMKELVELLNRYAYEYYTKDTPSVSDSEYDQLYRELVELETAHPDEILPESPTHRVG 60 >gi|326796428|ref|YP_004314248.1| DNA ligase [Marinomonas mediterranea MMB-1] gi|326547192|gb|ADZ92412.1| DNA ligase [Marinomonas mediterranea MMB-1] Length = 680 Score = 77.6 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 54 LSKGE--AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ + ++ V+ LV + Y+ DDP D YDR+ + L ++ + P+ D Sbjct: 1 MTDAQTPSLEYVKTLVSQLNDYSYSYHVKDDPKVPDSEYDRLYKALQLIELKNPQWIQPD 60 Query: 112 HPWNTVG 118 P VG Sbjct: 61 SPTQRVG 67 >gi|125623311|ref|YP_001031794.1| NAD-dependent DNA ligase LigA [Lactococcus lactis subsp. cremoris MG1363] gi|166215816|sp|A2RIF3|DNLJ_LACLM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|124492119|emb|CAL97048.1| DNA ligase [Lactococcus lactis subsp. cremoris MG1363] gi|300070060|gb|ADJ59460.1| NAD-dependent DNA ligase LigA [Lactococcus lactis subsp. cremoris NZ9000] Length = 686 Score = 77.6 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L YY LD+P D YD + L L+++ P+L D P + G Sbjct: 3 IESKIKELTDQLNQFAYEYYTLDEPSVEDSEYDHLYHELVKLEQENPQLVRADSPTHRTG 62 >gi|76798177|ref|ZP_00780429.1| DNA ligase, NAD-dependent [Streptococcus agalactiae 18RS21] gi|77405561|ref|ZP_00782652.1| DNA ligase, NAD-dependent [Streptococcus agalactiae H36B] gi|77410701|ref|ZP_00787060.1| DNA ligase, NAD-dependent [Streptococcus agalactiae CJB111] gi|76586485|gb|EAO62991.1| DNA ligase, NAD-dependent [Streptococcus agalactiae 18RS21] gi|77163237|gb|EAO74189.1| DNA ligase, NAD-dependent [Streptococcus agalactiae CJB111] gi|77175868|gb|EAO78646.1| DNA ligase, NAD-dependent [Streptococcus agalactiae H36B] Length = 648 Score = 77.6 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 29/56 (51%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + K YY D+P +D YD++ L L++Q PE + P + VG Sbjct: 1 MNELVSLLNQYAKEYYTQDNPTVSDSQYDQLYRELVELEKQHPENILPNSPTHRVG 56 >gi|270292770|ref|ZP_06198981.1| DNA ligase, NAD-dependent [Streptococcus sp. M143] gi|270278749|gb|EFA24595.1| DNA ligase, NAD-dependent [Streptococcus sp. M143] Length = 652 Score = 77.6 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +P+ D P + VG Sbjct: 3 KRMNELVALLNRYASEYYTSDNPSVSDSEYDRLYRELVELEAAYPDQVLADSPTHRVG 60 >gi|306829554|ref|ZP_07462744.1| NAD-dependent DNA ligase LigA [Streptococcus mitis ATCC 6249] gi|304428640|gb|EFM31730.1| NAD-dependent DNA ligase LigA [Streptococcus mitis ATCC 6249] Length = 652 Score = 77.6 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +P+ D P + VG Sbjct: 3 KRMNELVALLNRYASEYYTSDNPSVSDSEYDRLYRELVELEAAYPDQVLADSPTHRVG 60 >gi|296532809|ref|ZP_06895486.1| NAD-dependent DNA ligase LigA [Roseomonas cervicalis ATCC 49957] gi|296266870|gb|EFH12818.1| NAD-dependent DNA ligase LigA [Roseomonas cervicalis ATCC 49957] Length = 719 Score = 77.6 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 35/68 (51%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 ++ VT+L++ +A E+ L + Y++ D P+ TD YD + R A++ +FP Sbjct: 6 RSLPVTALTEAQAAEELAALAQAIAEADLAYHQQDAPVITDAEYDALRRRNAAIEARFPA 65 Query: 107 LFDEDHPW 114 L D P Sbjct: 66 LKRADSPS 73 >gi|145589636|ref|YP_001156233.1| DNA ligase, NAD-dependent [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|190359270|sp|A4SYV5|DNLJ_POLSQ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|145048042|gb|ABP34669.1| DNA ligase, NAD-dependent [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 671 Score = 77.2 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 23/59 (38%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +L + YY LD+PL D YDR+ L ++ P+ + VG Sbjct: 10 ADRYAFLQAELARLEHAYYVLDNPLLPDIEYDRLYRELLDIEAAHPQWVTSESLSQRVG 68 >gi|171742735|ref|ZP_02918542.1| hypothetical protein BIFDEN_01849 [Bifidobacterium dentium ATCC 27678] gi|283456203|ref|YP_003360767.1| NAD-dependent DNA ligase [Bifidobacterium dentium Bd1] gi|171278349|gb|EDT46010.1| hypothetical protein BIFDEN_01849 [Bifidobacterium dentium ATCC 27678] gi|283102837|gb|ADB09943.1| NAD-dependent DNA ligase [Bifidobacterium dentium Bd1] Length = 897 Score = 77.2 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 29/69 (42%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V+SLS A + Q YY D P+ +D YD L AL+ QFP L Sbjct: 62 DVSSLSAEAAARLWAKVAAWVESDQIAYYIDDAPISSDAAYDARLRCLQALESQFPSLDT 121 Query: 110 EDHPWNTVG 118 P + VG Sbjct: 122 PQSPTHRVG 130 >gi|309777086|ref|ZP_07672052.1| DNA ligase, NAD-dependent [Erysipelotrichaceae bacterium 3_1_53] gi|308915156|gb|EFP60930.1| DNA ligase, NAD-dependent [Erysipelotrichaceae bacterium 3_1_53] Length = 665 Score = 77.2 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 29/60 (48%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + + L KI YY LD P +D YDR + L AL+E++P+ D + VG Sbjct: 2 SQQRILELRKILDRLAYEYYVLDQPSMSDQEYDRYYQELVALEEKYPQYRDPNSITQRVG 61 >gi|313207091|ref|YP_004046268.1| DNA ligase, naD-dependent [Riemerella anatipestifer DSM 15868] gi|312446407|gb|ADQ82762.1| DNA ligase, NAD-dependent [Riemerella anatipestifer DSM 15868] gi|315022511|gb|EFT35538.1| DNA ligase [Riemerella anatipestifer RA-YM] Length = 669 Score = 77.2 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S + ++E L + H YY LD P +D +D + E L L+ +PE D + P Sbjct: 1 MSLDDIKHKIEELREELHQHNYNYYVLDTPSISDYEFDMMLEELKELELAYPEFADNNSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|325335472|gb|ADZ11746.1| NAD-dependent DNA ligase (contains BRCT domain type II) [Riemerella anatipestifer RA-GD] Length = 669 Score = 77.2 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S + ++E L + H YY LD P +D +D + E L L+ +PE D + P Sbjct: 1 MSLDDIKHKIEELREELHQHNYNYYVLDTPSISDYEFDMMLEELKELELAYPEFADNNSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|289168011|ref|YP_003446280.1| DNA ligase [Streptococcus mitis B6] gi|288907578|emb|CBJ22415.1| DNA ligase [Streptococcus mitis B6] Length = 652 Score = 76.8 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +P+ D P + VG Sbjct: 3 KRMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPDQVLADSPTHRVG 60 >gi|293188969|ref|ZP_06607703.1| DNA ligase, NAD-dependent [Actinomyces odontolyticus F0309] gi|292822104|gb|EFF81029.1| DNA ligase, NAD-dependent [Actinomyces odontolyticus F0309] Length = 777 Score = 76.8 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 29/69 (42%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 + + LV + YY D P D YDR+ ++ ++E++P+L Sbjct: 3 PMADSTFETTRDRYNDLVDRINDARAAYYDRDSPTLADADYDRMYREVEQIEERYPQLRS 62 Query: 110 EDHPWNTVG 118 D P +VG Sbjct: 63 ADSPTMSVG 71 >gi|168483195|ref|ZP_02708147.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae CDC1873-00] gi|168492012|ref|ZP_02716155.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae CDC0288-04] gi|221231854|ref|YP_002511006.1| DNA ligase [Streptococcus pneumoniae ATCC 700669] gi|225854613|ref|YP_002736125.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae JJA] gi|254781427|sp|B8ZPV9|DNLJ_STRPJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781431|sp|C1CEA4|DNLJ_STRZJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|172043461|gb|EDT51507.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae CDC1873-00] gi|183573785|gb|EDT94313.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae CDC0288-04] gi|220674314|emb|CAR68857.1| DNA ligase [Streptococcus pneumoniae ATCC 700669] gi|225722247|gb|ACO18100.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae JJA] Length = 652 Score = 76.8 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 26/58 (44%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P D YDR+ L L+ +PE D P + VG Sbjct: 3 KRMNELVALLNRYATEYYTSDNPSVADSEYDRLYRELVELETAYPEQVLADSPTHRVG 60 >gi|307708748|ref|ZP_07645210.1| DNA ligase, NAD-dependent [Streptococcus mitis NCTC 12261] gi|307615114|gb|EFN94325.1| DNA ligase, NAD-dependent [Streptococcus mitis NCTC 12261] Length = 652 Score = 76.8 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +P+ D P + VG Sbjct: 3 KRMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPDQVLADSPTHRVG 60 >gi|296454555|ref|YP_003661698.1| DNA ligase [Bifidobacterium longum subsp. longum JDM301] gi|296183986|gb|ADH00868.1| DNA ligase, NAD-dependent [Bifidobacterium longum subsp. longum JDM301] Length = 920 Score = 76.8 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 9/96 (9%) Query: 32 AKFLPNKRALESWLDKAKK---------VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDD 82 A+F P + L V +++ A + Q YY D Sbjct: 26 ARFAPGSEQWIAALQPTDDDAIRLDRFDVNTMTAEAAARLWARVAAWVESDQIAYYIDDS 85 Query: 83 PLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 P+ +D YD L+ L+ FP L + P + VG Sbjct: 86 PVSSDAAYDARMRCLERLEAAFPSLDNPQSPTHRVG 121 >gi|307704876|ref|ZP_07641768.1| DNA ligase, NAD-dependent [Streptococcus mitis SK597] gi|307621589|gb|EFO00634.1| DNA ligase, NAD-dependent [Streptococcus mitis SK597] Length = 652 Score = 76.8 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +P+ D P + VG Sbjct: 3 KRMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPDQVLADSPTHRVG 60 >gi|224437677|ref|ZP_03658624.1| NAD-dependent DNA ligase LigA [Helicobacter cinaedi CCUG 18818] gi|313144124|ref|ZP_07806317.1| DNA ligase [Helicobacter cinaedi CCUG 18818] gi|313129155|gb|EFR46772.1| DNA ligase [Helicobacter cinaedi CCUG 18818] Length = 651 Score = 76.8 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ E ++ L K+A H YY LDDP+ TD YD + ++ + Q P L + P Sbjct: 1 MTQQEYSSNIQKLTKMAYH----YYVLDDPIATDSQYDELYHQVLNFERQNPILISPNSP 56 Query: 114 WNTVG 118 VG Sbjct: 57 TQRVG 61 >gi|315122567|ref|YP_004063056.1| NAD-dependent DNA ligase LigA [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495969|gb|ADR52568.1| NAD-dependent DNA ligase LigA [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 739 Score = 76.8 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 3/75 (4%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 K + LS +A E+ +L +H YY+ P D YD++ ER DA+ FPE Sbjct: 5 KFIPIEELSPEQAKKELSFLQHEISYHDDLYYQHSQPKILDFEYDQLKERCDAIARAFPE 64 Query: 107 LFD-EDH--PWNTVG 118 D P N +G Sbjct: 65 FASLADSNGPLNKIG 79 >gi|86142854|ref|ZP_01061293.1| DNA ligase [Leeuwenhoekiella blandensis MED217] gi|85830886|gb|EAQ49344.1| DNA ligase [Leeuwenhoekiella blandensis MED217] Length = 663 Score = 76.8 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A ++E L + + YY LD P D +D+ + L ++ + PE +D + P VG Sbjct: 3 AQEKIEALRQELRQYNYEYYVLDKPQVDDYTFDQKLKELQEMEAKHPEFYDANSPTLRVG 62 >gi|150025890|ref|YP_001296716.1| DNA ligase (NAD+) [Flavobacterium psychrophilum JIP02/86] gi|166215404|sp|A6H0N9|DNLJ_FLAPJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|149772431|emb|CAL43913.1| DNA ligase (NAD+) [Flavobacterium psychrophilum JIP02/86] Length = 666 Score = 76.8 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 31/60 (51%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + +++ L + H YY LD+P +D +D L +L++ PE FDE+ P VG Sbjct: 3 VLQKIQSLREELNLHNYNYYVLDNPTISDYDFDVKLTDLQSLEKNNPEYFDENSPTQRVG 62 >gi|317180385|dbj|BAJ58171.1| NAD-dependent DNA ligase LigA [Helicobacter pylori F32] Length = 656 Score = 76.8 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL HH YY LDDP+ +D +YD++ + L A +E+ P + P Sbjct: 4 SQKEYLERIEYL-NTLSHH---YYNLDDPIVSDAVYDKLYQELKAYEEKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|227546782|ref|ZP_03976831.1| DNA ligase (NAD(+)) [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212744|gb|EEI80625.1| DNA ligase (NAD(+)) [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 920 Score = 76.8 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 9/96 (9%) Query: 32 AKFLPNKRALESWLDKAKK---------VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDD 82 A+F P + L V +++ A + Q YY D Sbjct: 26 ARFAPGSEQWIAALQPTDDDAIRLDRFDVNTMTAEAAARLWARVAAWVESDQIAYYIDDS 85 Query: 83 PLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 P+ +D YD L+ L+ FP L + P + VG Sbjct: 86 PVSSDAAYDARMRCLERLEAAFPSLDNPQSPTHRVG 121 >gi|322376748|ref|ZP_08051241.1| DNA ligase, NAD-dependent [Streptococcus sp. M334] gi|321282555|gb|EFX59562.1| DNA ligase, NAD-dependent [Streptococcus sp. M334] Length = 652 Score = 76.8 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +P+ D P + VG Sbjct: 3 KRMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPDQVLADSPTHRVG 60 >gi|296046593|gb|ADG86438.1| NAD-dependent DNA ligase [synthetic construct] Length = 689 Score = 76.8 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S+ E I +H+ YY LD P D YDR+ L L++ PEL D P Sbjct: 1 MSEKEKKISQLQQQLNQYNHE--YYVLDQPSVPDAEYDRLMTALIDLEKTNPELKTIDSP 58 Query: 114 WNTVG 118 VG Sbjct: 59 SQKVG 63 >gi|307706499|ref|ZP_07643306.1| DNA ligase, NAD-dependent [Streptococcus mitis SK321] gi|307617954|gb|EFN97114.1| DNA ligase, NAD-dependent [Streptococcus mitis SK321] Length = 652 Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +P+ D P + VG Sbjct: 3 KRMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPDQVLADSPTHRVG 60 >gi|239620760|ref|ZP_04663791.1| LigA [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312132368|ref|YP_003999707.1| lig [Bifidobacterium longum subsp. longum BBMN68] gi|239516336|gb|EEQ56203.1| LigA [Bifidobacterium longum subsp. infantis CCUG 52486] gi|311772424|gb|ADQ01912.1| Lig [Bifidobacterium longum subsp. longum BBMN68] Length = 920 Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 9/96 (9%) Query: 32 AKFLPNKRALESWLDKAKK---------VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDD 82 A+F P + L V +++ A + Q YY D Sbjct: 26 ARFAPGSEQWIAALQPTDDDAIRLDRFDVNTMTAEAAARLWARVAAWVESDQIAYYIDDS 85 Query: 83 PLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 P+ +D YD L+ L+ FP L + P + VG Sbjct: 86 PVSSDAAYDARMRCLERLEAAFPSLDNPQSPTHRVG 121 >gi|255038855|ref|YP_003089476.1| DNA ligase, NAD-dependent [Dyadobacter fermentans DSM 18053] gi|254951611|gb|ACT96311.1| DNA ligase, NAD-dependent [Dyadobacter fermentans DSM 18053] Length = 695 Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + ++ YY+ +D +D++ + L AL+ ++P+ +D P VG Sbjct: 4 EQRIQELSEKLHYYNDRYYQDSVSEISDYEFDQLLKELQALESEYPQFRQDDSPTQRVG 62 >gi|317481657|ref|ZP_07940691.1| DNA ligase [Bifidobacterium sp. 12_1_47BFAA] gi|316916889|gb|EFV38277.1| DNA ligase [Bifidobacterium sp. 12_1_47BFAA] Length = 920 Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 9/96 (9%) Query: 32 AKFLPNKRALESWLDKAKK---------VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDD 82 A+F P + L V +++ A + Q YY D Sbjct: 26 ARFAPGSEQWIAALQPTDDDAIRLDRFDVNTMTAEAAARLWARVAAWVESDQIAYYIDDS 85 Query: 83 PLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 P+ +D YD L+ L+ FP L + P + VG Sbjct: 86 PVSSDAAYDARMRCLERLEAAFPSLDNPQSPTHRVG 121 >gi|322689624|ref|YP_004209358.1| DNA ligase [Bifidobacterium longum subsp. infantis 157F] gi|322691585|ref|YP_004221155.1| DNA ligase [Bifidobacterium longum subsp. longum JCM 1217] gi|291516189|emb|CBK69805.1| DNA ligase, NAD-dependent [Bifidobacterium longum subsp. longum F8] gi|320456441|dbj|BAJ67063.1| DNA ligase [Bifidobacterium longum subsp. longum JCM 1217] gi|320460960|dbj|BAJ71580.1| DNA ligase [Bifidobacterium longum subsp. infantis 157F] Length = 920 Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 9/96 (9%) Query: 32 AKFLPNKRALESWLDKAKK---------VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDD 82 A+F P + L V +++ A + Q YY D Sbjct: 26 ARFAPGSEQWIAALQPTDDDAIRLDRFDVNTMTAEAAARLWARVAAWVESDQIAYYIDDS 85 Query: 83 PLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 P+ +D YD L+ L+ FP L + P + VG Sbjct: 86 PVSSDAAYDARMRCLERLEAAFPSLDNPQSPTHRVG 121 >gi|289178474|gb|ADC85720.1| NAD-dependent DNA ligase [Bifidobacterium animalis subsp. lactis BB-12] Length = 889 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 30/69 (43%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V+ L+ +A+ L Q YY D PL +D YD L L+ +FP+L Sbjct: 65 DVSKLNVEQAVRLWSRLSAWVEGDQVAYYVKDAPLSSDAAYDARMNCLKRLESEFPQLDT 124 Query: 110 EDHPWNTVG 118 P + VG Sbjct: 125 PQSPTHRVG 133 >gi|148989161|ref|ZP_01820551.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae SP6-BS73] gi|147925384|gb|EDK76462.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae SP6-BS73] Length = 374 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +PE D P + VG Sbjct: 1 MNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVG 56 >gi|23464680|ref|NP_695283.1| LigA [Bifidobacterium longum NCC2705] gi|81754681|sp|Q8G830|DNLJ_BIFLO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|23325242|gb|AAN23919.1| LigA [Bifidobacterium longum NCC2705] Length = 920 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 9/96 (9%) Query: 32 AKFLPNKRALESWLDKAKK---------VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDD 82 A+F P + L V +++ A + Q YY D Sbjct: 26 ARFAPGSEQWIAALQPTDDDAIRLDRFDVNTMTAEAAARLWARVAAWVESDQIAYYIDDS 85 Query: 83 PLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 P+ +D YD L+ L+ FP L + P + VG Sbjct: 86 PVSSDAAYDARMRCLERLEAAFPSLDNPQSPTHRVG 121 >gi|306822599|ref|ZP_07455977.1| NAD-dependent DNA ligase LigA [Bifidobacterium dentium ATCC 27679] gi|304554144|gb|EFM42053.1| NAD-dependent DNA ligase LigA [Bifidobacterium dentium ATCC 27679] Length = 897 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 29/69 (42%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V+SLS A + Q YY D P+ +D YD L AL+ QFP L Sbjct: 62 DVSSLSAEAAARLWAKVAAWVESDQIAYYIDDAPISSDAAYDARLRCLQALESQFPPLDT 121 Query: 110 EDHPWNTVG 118 P + VG Sbjct: 122 PQSPTHRVG 130 >gi|149203841|ref|ZP_01880810.1| DNA ligase, NAD-dependent [Roseovarius sp. TM1035] gi|149142958|gb|EDM31000.1| DNA ligase, NAD-dependent [Roseovarius sp. TM1035] Length = 717 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 36/80 (45%) Query: 39 RALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 R E + V L++ EA E+ L + + Y+ D P TD YD + R Sbjct: 6 RISEGPMTDKLAVEDLTESEAQAELGRLAALLAAANRAYHTEDAPEITDAAYDALKARNA 65 Query: 99 ALQEQFPELFDEDHPWNTVG 118 A++ +FP L +D + VG Sbjct: 66 AIEARFPTLKRDDSASDQVG 85 >gi|311086964|gb|ADP67044.1| DNA ligase (NAD+) [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 678 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L KI L ++ +Y+ L+ + +D YD + +L L+ + EL D P VG Sbjct: 5 KDKIEKLRKILLKYEYFYHTLNQSIISDAEYDYLFRQLYELELKNKELIPSDSPTQKVG 63 >gi|219682005|ref|YP_002468389.1| DNA ligase (NAD+) [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254781272|sp|B8D6X9|DNLJ_BUCAT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219621738|gb|ACL29894.1| DNA ligase (NAD+) [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311085811|gb|ADP65893.1| DNA ligase (NAD+) [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086384|gb|ADP66465.1| DNA ligase (NAD+) [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 676 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L KI L ++ +Y+ L+ + +D YD + +L L+ + EL D P VG Sbjct: 5 KDKIEKLRKILLKYEYFYHTLNQSIISDAEYDYLFRQLYELELKNKELIPSDSPTQKVG 63 >gi|308811310|ref|XP_003082963.1| COG0272: NAD-dependent DNA ligase (ISS) [Ostreococcus tauri] gi|116054841|emb|CAL56918.1| COG0272: NAD-dependent DNA ligase (ISS) [Ostreococcus tauri] Length = 808 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 29/67 (43%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 SL+ EA E+E L + HH + YY + + +D YD + R A++ P Sbjct: 63 DSLTVDEARRELERLNEELAHHDRSYYNDGEGVISDSEYDSLRARYLAIERLHPSAARAL 122 Query: 112 HPWNTVG 118 VG Sbjct: 123 GASARVG 129 >gi|15616692|ref|NP_239904.1| DNA ligase (NAD+) [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11132251|sp|P57172|DNLJ_BUCAI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|25294009|pir||F84937 DNA ligase (NAD) (EC 6.5.1.2) [imported] - Buchnera sp. (strain APS) gi|10038755|dbj|BAB12790.1| DNA ligase (NAD+) [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 675 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 31/59 (52%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L KI L ++ +Y+ L+ + +D YD + +L L+ + EL D P VG Sbjct: 5 KDKIEKLRKILLKYEYFYHTLNQSIISDAEYDYLFRQLYELELKNKELIPSDSPTQKVG 63 >gi|213691626|ref|YP_002322212.1| DNA ligase, NAD-dependent [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254781260|sp|B7GPV4|DNLJ_BIFLI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|213523087|gb|ACJ51834.1| DNA ligase, NAD-dependent [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457713|dbj|BAJ68334.1| DNA ligase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 921 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 9/96 (9%) Query: 32 AKFLPNKRALESWLDKAKK---------VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDD 82 A+F P + L V +++ A + Q YY D Sbjct: 26 ARFAPGSEQWIAALQPTDDDAIRLDRFDVNTMTAEAAARLWARVAAWVESDQIAYYIDDS 85 Query: 83 PLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 P+ +D YD L+ L+ FP L + P + VG Sbjct: 86 PVSSDAAYDARMRCLERLEAAFPSLDNPQSPTHRVG 121 >gi|254781172|ref|YP_003065585.1| NAD-dependent DNA ligase LigA [Candidatus Liberibacter asiaticus str. psy62] gi|254040849|gb|ACT57645.1| NAD-dependent DNA ligase LigA [Candidatus Liberibacter asiaticus str. psy62] Length = 731 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 + +LS +A E+ L + +H YY+ P+ D YD + R DA+ FP+L Sbjct: 8 PIEALSIEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLAR 67 Query: 110 ---EDHPWNTVG 118 + P N +G Sbjct: 68 SEDPNGPLNKIG 79 >gi|309800924|ref|ZP_07695056.1| DNA ligase (NAD+) [Bifidobacterium dentium JCVIHMP022] gi|308222460|gb|EFO78740.1| DNA ligase (NAD+) [Bifidobacterium dentium JCVIHMP022] Length = 885 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 29/69 (42%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V+SLS A + Q YY D P+ +D YD L AL+ QFP L Sbjct: 62 DVSSLSAEAAARLWAKVAAWVESDQIAYYIDDAPISSDAAYDARLRCLQALESQFPPLDT 121 Query: 110 EDHPWNTVG 118 P + VG Sbjct: 122 PQSPTHRVG 130 >gi|256420112|ref|YP_003120765.1| DNA ligase, NAD-dependent [Chitinophaga pinensis DSM 2588] gi|256035020|gb|ACU58564.1| DNA ligase, NAD-dependent [Chitinophaga pinensis DSM 2588] Length = 709 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 5/88 (5%) Query: 30 LEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGL 89 +E L + L L + + + L +E L ++ +++ YY DP+ +D Sbjct: 6 IEITLLQLAKDLLGKLQQKETIQDLDST-----LENLRRVIIYNDWRYYVQSDPVLSDYE 60 Query: 90 YDRVSERLDALQEQFPELFDEDHPWNTV 117 YD++ L L+ P+ D P V Sbjct: 61 YDQLFAWLKELETANPDKVSADSPTQRV 88 >gi|329116783|ref|ZP_08245500.1| DNA ligase (NAD+) [Streptococcus parauberis NCFD 2020] gi|326907188|gb|EGE54102.1| DNA ligase (NAD+) [Streptococcus parauberis NCFD 2020] Length = 654 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + ++ YY D P +D YDR+ L L+E++PE +D P VG Sbjct: 2 EKRIKELTDLLNQYRLEYYTNDSPSVSDQDYDRLYHELVQLEEEYPEYALKDSPTQAVG 60 >gi|291288208|ref|YP_003505024.1| DNA ligase, NAD-dependent [Denitrovibrio acetiphilus DSM 12809] gi|290885368|gb|ADD69068.1| DNA ligase, NAD-dependent [Denitrovibrio acetiphilus DSM 12809] Length = 652 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV ++ K YY DDP+ D YD++ L ++ + P + D P VG Sbjct: 3 YRELVDKLNYYSKKYYVEDDPVVADAEYDKLYNELLRIEAEDPSIISHDSPSQRVG 58 >gi|183601766|ref|ZP_02963136.1| LigA [Bifidobacterium animalis subsp. lactis HN019] gi|219683704|ref|YP_002470087.1| DNA ligase, NAD-dependent [Bifidobacterium animalis subsp. lactis AD011] gi|241190736|ref|YP_002968130.1| LigA [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196142|ref|YP_002969697.1| LigA [Bifidobacterium animalis subsp. lactis DSM 10140] gi|254781258|sp|B8DU32|DNLJ_BIFA0 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|183219372|gb|EDT90013.1| LigA [Bifidobacterium animalis subsp. lactis HN019] gi|219621354|gb|ACL29511.1| DNA ligase, NAD-dependent [Bifidobacterium animalis subsp. lactis AD011] gi|240249128|gb|ACS46068.1| LigA [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250696|gb|ACS47635.1| LigA [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793725|gb|ADG33260.1| LigA [Bifidobacterium animalis subsp. lactis V9] Length = 863 Score = 76.0 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 30/69 (43%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V+ L+ +A+ L Q YY D PL +D YD L L+ +FP+L Sbjct: 39 DVSKLNVEQAVRLWSRLSAWVEGDQVAYYVKDAPLSSDAAYDARMNCLKRLESEFPQLDT 98 Query: 110 EDHPWNTVG 118 P + VG Sbjct: 99 PQSPTHRVG 107 >gi|183603490|ref|ZP_02717204.2| DNA ligase, NAD-dependent [Streptococcus pneumoniae CDC3059-06] gi|183576581|gb|EDT97109.1| DNA ligase, NAD-dependent [Streptococcus pneumoniae CDC3059-06] Length = 648 Score = 76.0 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 26/56 (46%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P D YDR+ L L+ +PE D P + VG Sbjct: 1 MNELVALLNRYATEYYTSDNPSVADSEYDRLYRELVELETAYPEQVLADSPTHRVG 56 >gi|307709253|ref|ZP_07645711.1| DNA ligase, NAD-dependent [Streptococcus mitis SK564] gi|307619836|gb|EFN98954.1| DNA ligase, NAD-dependent [Streptococcus mitis SK564] Length = 648 Score = 76.0 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YDR+ L L+ +P+ D P + VG Sbjct: 1 MNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELESAYPDQVLADSPTHRVG 56 >gi|319956399|ref|YP_004167662.1| DNA ligase, nad-dependent [Nitratifractor salsuginis DSM 16511] gi|319418803|gb|ADV45913.1| DNA ligase, NAD-dependent [Nitratifractor salsuginis DSM 16511] Length = 657 Score = 76.0 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 26/58 (44%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E E V YY D+P TD +YDR+ ++A ++ P+ D P VG Sbjct: 6 QEYEEAVAKLKRWAYAYYVEDNPEVTDEVYDRLYREVEAYEKAHPDEIDPTSPTQRVG 63 >gi|317010835|gb|ADU84582.1| NAD-dependent DNA ligase LigA [Helicobacter pylori SouthAfrica7] Length = 657 Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL HH YY LD+P+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYL-NTLSHH---YYNLDEPIVSDAVYDELYQELKAYEEENPSYIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|315586702|gb|ADU41083.1| NAD-dependent DNA ligase LigA [Helicobacter pylori 35A] Length = 656 Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL HH YY LDDP+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYL-NTLSHH---YYNLDDPIVSDAVYDELYQELKAYEEKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|225352232|ref|ZP_03743255.1| hypothetical protein BIFPSEUDO_03848 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157479|gb|EEG70818.1| hypothetical protein BIFPSEUDO_03848 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 909 Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 29/69 (42%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V+S+S A + Q YY D P+ +D YD L AL+ QFP L Sbjct: 82 DVSSISAEAAARLWARVAAWVESDQIAYYIDDAPVSSDAAYDARIRCLQALEAQFPSLDS 141 Query: 110 EDHPWNTVG 118 P + VG Sbjct: 142 AQSPTHRVG 150 >gi|317177554|dbj|BAJ55343.1| NAD-dependent DNA ligase LigA [Helicobacter pylori F16] Length = 656 Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL HH YY LDDP+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYL-NTLSHH---YYNLDDPIVSDAVYDELYQELKAYEEKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|296046569|gb|ADG86426.1| NAD-dependent DNA ligase [Francisella novicida] Length = 689 Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 2/65 (3%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ E I +H+ YY LD P D YDR+ L L++ PEL D P Sbjct: 1 MTPVEKKISQLQQQLNQYNHE--YYVLDQPSVPDAEYDRLMTALIDLEKTNPELKTIDSP 58 Query: 114 WNTVG 118 VG Sbjct: 59 SQKVG 63 >gi|295090337|emb|CBK76444.1| DNA ligase, NAD-dependent [Clostridium cf. saccharolyticum K10] Length = 676 Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 +++ LV+ H+ YY L+ P +D YDR+ ++L+ L+E+ + + P TVGY Sbjct: 15 ADKIKELVQTLNRHRHAYYNLNAPEISDAEYDRMYDQLERLEEE-TGIIYSNSPTQTVGY 73 >gi|297379814|gb|ADI34701.1| DNA ligase, NAD-dependent [Helicobacter pylori v225d] Length = 656 Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL HH YY LDDP+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYL-NTLSHH---YYNLDDPIVSDAVYDELYQELKAYEEKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|254495534|ref|ZP_05108458.1| DNA ligase, NAD-dependent [Polaribacter sp. MED152] gi|85819890|gb|EAQ41047.1| DNA ligase, NAD-dependent [Polaribacter sp. MED152] Length = 665 Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L H YY LD+ +D +D + LD L+++ P FD + P VG Sbjct: 3 VQERIIELRNELNRHNYNYYVLDNATISDFEFDIKLKELDKLEQENPLFFDANSPTQRVG 62 >gi|328946560|gb|EGG40699.1| NAD-dependent DNA ligase LigA [Streptococcus sanguinis SK1087] Length = 652 Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 27/59 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LVK+ + YY D P +D YDR+ L L+E++ D P + VG Sbjct: 2 KERMSELVKLLNRYAHEYYTADRPSVSDSEYDRLYRELVELEEKYSTDILPDSPTHRVG 60 >gi|261839558|gb|ACX99323.1| NAD-dependent DNA ligase LigA [Helicobacter pylori 52] Length = 657 Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL HH YY LDDP+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYL-NTLSHH---YYNLDDPIVSDAVYDELYQELKAYEEKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|310644240|ref|YP_003948999.1| DNA ligase, nad-dependent [Paenibacillus polymyxa SC2] gi|309249191|gb|ADO58758.1| DNA ligase, NAD-dependent [Paenibacillus polymyxa SC2] Length = 671 Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 M +E LV + YY LDDP +D YD + + L AL++ L D P VG Sbjct: 4 MHRMEQLVAELNTYNYHYYTLDDPQISDKEYDVLYDELVALEQT-SGLVLPDSPTQRVG 61 >gi|73667316|ref|YP_303332.1| NAD-dependent DNA ligase [Ehrlichia canis str. Jake] gi|123732189|sp|Q3YRC1|DNLJ_EHRCJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|72394457|gb|AAZ68734.1| NAD-dependent DNA ligase [Ehrlichia canis str. Jake] Length = 677 Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 34/65 (52%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + EA +E++ L HH YY D+P TD YD + + + + E FPEL ++ Sbjct: 1 MKQEEAKLELDKLNSQIQHHDFLYYTQDNPQITDAEYDVLCHKRNLILESFPELASNNNY 60 Query: 114 WNTVG 118 + VG Sbjct: 61 QDNVG 65 >gi|23013561|ref|ZP_00053441.1| COG0272: NAD-dependent DNA ligase (contains BRCT domain type II) [Magnetospirillum magnetotacticum MS-1] Length = 696 Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 + L+ EA IE LV+ + + Y+ D PL D +YD RL ++ +FPEL Sbjct: 7 PIDVLTPFEARIEHAELVEKLVSWDEAYHGQDAPLVPDDVYDGAKRRLSGIEARFPEL-A 65 Query: 110 EDHPWN-TVG 118 P VG Sbjct: 66 AKSPIKDKVG 75 >gi|257069044|ref|YP_003155299.1| DNA ligase, NAD-dependent [Brachybacterium faecium DSM 4810] gi|256559862|gb|ACU85709.1| DNA ligase, NAD-dependent [Brachybacterium faecium DSM 4810] Length = 871 Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L + YY D P D YD + + L AL+E P+L ED P TVG Sbjct: 21 AQQRIAALTARIEQARVDYYEHDAPTMADAEYDELEKELRALEEANPQLAAEDSPTRTVG 80 >gi|67920947|ref|ZP_00514466.1| NAD-dependent DNA ligase [Crocosphaera watsonii WH 8501] gi|67857064|gb|EAM52304.1| NAD-dependent DNA ligase [Crocosphaera watsonii WH 8501] Length = 670 Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 24/45 (53%) Query: 74 QKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD+P+ D +YD++ LD L+++ L D P VG Sbjct: 17 NYAYYVLDNPIMEDAVYDQLYRELDTLEKENTHLITSDSPTQRVG 61 >gi|217033559|ref|ZP_03438988.1| hypothetical protein HP9810_905g78 [Helicobacter pylori 98-10] gi|216944084|gb|EEC23515.1| hypothetical protein HP9810_905g78 [Helicobacter pylori 98-10] Length = 656 Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL HH YY LDDP+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYL-NTLSHH---YYNLDDPIVSDAVYDELYQELKAYEEKNPNGIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|293365500|ref|ZP_06612209.1| NAD-dependent DNA ligase LigA [Streptococcus oralis ATCC 35037] gi|307703456|ref|ZP_07640398.1| DNA ligase, NAD-dependent [Streptococcus oralis ATCC 35037] gi|291315868|gb|EFE56312.1| NAD-dependent DNA ligase LigA [Streptococcus oralis ATCC 35037] gi|307622863|gb|EFO01858.1| DNA ligase, NAD-dependent [Streptococcus oralis ATCC 35037] Length = 652 Score = 75.3 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 26/58 (44%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YD + L L+ +P+ D P + VG Sbjct: 3 ERMNELVALLNRYATEYYTSDNPSVSDSEYDCLYRELVELEAAYPDQVLADSPTHRVG 60 >gi|71281008|ref|YP_270140.1| DNA ligase, NAD-dependent [Colwellia psychrerythraea 34H] gi|123774873|sp|Q47YI0|DNLJ_COLP3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|71146748|gb|AAZ27221.1| DNA ligase, NAD-dependent [Colwellia psychrerythraea 34H] Length = 689 Score = 75.3 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 21/44 (47%) Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY LD P D YDR+ L L++ PEL D P VG Sbjct: 20 HEYYVLDQPSVPDAEYDRLMTALIDLEKTNPELKTIDSPSQKVG 63 >gi|311064086|ref|YP_003970811.1| NAD-dependent DNA ligase [Bifidobacterium bifidum PRL2010] gi|310866405|gb|ADP35774.1| LigA NAD-dependent DNA ligase [Bifidobacterium bifidum PRL2010] Length = 896 Score = 75.3 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 34/96 (35%), Gaps = 9/96 (9%) Query: 32 AKFLPNKRALESWLDKAK---------KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDD 82 A+F P + L V+SLS A + Q YY D Sbjct: 36 ARFAPGSSQWVAALQSTDADAARLDRLDVSSLSNEVAARLWARVAAWVEADQIAYYIDDA 95 Query: 83 PLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 P+ +D YD L L+ +FP L P + VG Sbjct: 96 PVSSDAAYDARLRCLQRLEAEFPSLDSPQSPTHRVG 131 >gi|317181928|dbj|BAJ59712.1| NAD-dependent DNA ligase LigA [Helicobacter pylori F57] Length = 656 Score = 75.3 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL HH YY LDDP+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYL-NTLSHH---YYNLDDPIVSDAVYDELYQELKAYEEKNPNSIQSNSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|310287227|ref|YP_003938485.1| NAD-dependent DNA ligase [Bifidobacterium bifidum S17] gi|309251163|gb|ADO52911.1| NAD-dependent DNA ligase [Bifidobacterium bifidum S17] Length = 900 Score = 75.3 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 34/96 (35%), Gaps = 9/96 (9%) Query: 32 AKFLPNKRALESWLDKAK---------KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDD 82 A+F P + L V+SLS A + Q YY D Sbjct: 36 ARFAPGSSQWVAALQSTDADAARLDRLDVSSLSNEVAARLWARVAAWVEADQIAYYIDDA 95 Query: 83 PLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 P+ +D YD L L+ +FP L P + VG Sbjct: 96 PVSSDAAYDARLRCLQRLEAEFPSLDSPQSPTHRVG 131 >gi|261838144|gb|ACX97910.1| DNA ligase [Helicobacter pylori 51] Length = 656 Score = 75.3 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL HH YY LDDP+ +D LYD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYL-NTLSHH---YYNLDDPIVSDALYDELYQELKAYEEKNPNGIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|323359739|ref|YP_004226135.1| NAD-dependent DNA ligase [Microbacterium testaceum StLB037] gi|323276110|dbj|BAJ76255.1| NAD-dependent DNA ligase [Microbacterium testaceum StLB037] Length = 810 Score = 75.3 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 33/68 (48%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 + LS +A E L + ++ YY D L D YD RL+AL+ + PEL + Sbjct: 7 LPDLSLDDARAEAIDLTQRITDAREAYYGRDAELVDDATYDGWMHRLEALERRHPELQGQ 66 Query: 111 DHPWNTVG 118 D P +VG Sbjct: 67 DSPTLSVG 74 >gi|253575959|ref|ZP_04853293.1| DNA ligase, NAD-dependent [Paenibacillus sp. oral taxon 786 str. D14] gi|251844753|gb|EES72767.1| DNA ligase, NAD-dependent [Paenibacillus sp. oral taxon 786 str. D14] Length = 672 Score = 75.3 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +AM +E LV+ + YY LD+P+ +D YD++ + L AL+ + + D P V Sbjct: 2 DAMQRMEQLVEQLNRYNYHYYTLDEPIISDKEYDQLYDELTALEAE-TGITLPDSPTGRV 60 Query: 118 G 118 G Sbjct: 61 G 61 >gi|317179023|dbj|BAJ56811.1| NAD-dependent DNA ligase LigA [Helicobacter pylori F30] Length = 657 Score = 75.3 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL HH YY LDDP+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYL-NTLSHH---YYNLDDPIVSDAIYDELYQELKAYEEKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|23336066|ref|ZP_00121295.1| COG0272: NAD-dependent DNA ligase (contains BRCT domain type II) [Bifidobacterium longum DJO10A] gi|189438929|ref|YP_001954010.1| NAD-dependent DNA ligase [Bifidobacterium longum DJO10A] gi|254781259|sp|B3DPR8|DNLJ_BIFLD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|189427364|gb|ACD97512.1| NAD-dependent DNA ligase [Bifidobacterium longum DJO10A] Length = 920 Score = 75.3 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 9/96 (9%) Query: 32 AKFLPNKRALESWLDKAKK---------VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDD 82 A+F P + L V ++ A + Q YY D Sbjct: 26 ARFAPGSEQWIAALQPTDDDAIRLDRFDVNMMTAEAAARLWARVAAWVESDQIAYYIDDS 85 Query: 83 PLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 P+ +D YD L+ L+ FP L + P + VG Sbjct: 86 PVSSDAAYDARMRCLERLEAAFPSLDNPQSPTHRVG 121 >gi|291519153|emb|CBK74374.1| DNA ligase, NAD-dependent [Butyrivibrio fibrisolvens 16/4] Length = 651 Score = 74.9 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 23/42 (54%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D+P TD YD++ +L A +++ PE D P +G Sbjct: 4 YYNDDEPEITDFEYDQLMLQLKAAEKEHPEWVTPDSPTQKIG 45 >gi|304405678|ref|ZP_07387337.1| DNA ligase, NAD-dependent [Paenibacillus curdlanolyticus YK9] gi|304345717|gb|EFM11552.1| DNA ligase, NAD-dependent [Paenibacillus curdlanolyticus YK9] Length = 689 Score = 74.9 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%) Query: 41 LESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 +ES L++ + + + + + + L H YY LD P +D +D++ + L AL Sbjct: 1 MESRLNEQEAAIAANPQQ-LERMRKLADEIERHSYSYYTLDRPTISDAEFDKLYDELVAL 59 Query: 101 QEQFPELFDEDHPWNTVG 118 ++ + E P VG Sbjct: 60 EKTI-GIVLEHSPTQRVG 76 >gi|150388772|ref|YP_001318821.1| NAD-dependent DNA ligase LigA [Alkaliphilus metalliredigens QYMF] gi|190359225|sp|A6TLU4|DNLJ_ALKMQ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|149948634|gb|ABR47162.1| DNA ligase, NAD-dependent [Alkaliphilus metalliredigens QYMF] Length = 660 Score = 74.9 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 M E+E LVK + YY LD P+ +D YD + ++L L+E+ D P VG Sbjct: 4 MKEMEQLVKQLNEYSYKYYVLDQPIVSDKEYDSLYDQLIELEEKTGH-VLLDSPTQRVG 61 >gi|224282769|ref|ZP_03646091.1| LigA [Bifidobacterium bifidum NCIMB 41171] gi|313139930|ref|ZP_07802123.1| LigA [Bifidobacterium bifidum NCIMB 41171] gi|313132440|gb|EFR50057.1| LigA [Bifidobacterium bifidum NCIMB 41171] Length = 900 Score = 74.9 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 28/69 (40%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V+SLS A + Q YY D P+ +D YD L L+ +FP L Sbjct: 63 DVSSLSNEVAARLWARVAAWVEADQIAYYIDDAPVSSDAAYDARLRCLQRLEAEFPSLDS 122 Query: 110 EDHPWNTVG 118 P + VG Sbjct: 123 PQSPTHRVG 131 >gi|294155884|ref|YP_003560268.1| DNA ligase (NAD(+)) [Mycoplasma crocodyli MP145] gi|291600422|gb|ADE19918.1| DNA ligase (NAD(+)) [Mycoplasma crocodyli MP145] Length = 657 Score = 74.9 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 32/62 (51%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + + + L+ + YY LD P +D YD + + L +++Q P++ ++D P Sbjct: 3 QKVIDKYQELIAKIKQYNNEYYNLDQPSVSDAEYDALYKELLEIEKQNPKIINQDSPSQI 62 Query: 117 VG 118 +G Sbjct: 63 IG 64 >gi|26553637|ref|NP_757571.1| NAD-dependent DNA ligase [Mycoplasma penetrans HF-2] gi|81748016|sp|Q8EWL9|DNLJ_MYCPE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|26453643|dbj|BAC43975.1| NAD-dependent DNA ligase [Mycoplasma penetrans HF-2] Length = 701 Score = 74.9 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 30/64 (46%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + E + ++ L K + YY L++P +D YD + L L+ Q+PE + P Sbjct: 18 NNKEILNRIQNLRKNLNQYNYEYYGLENPSVSDYEYDMCLKELIQLETQYPEFDSPNSPS 77 Query: 115 NTVG 118 VG Sbjct: 78 KKVG 81 >gi|311744048|ref|ZP_07717854.1| NAD-dependent DNA ligase LigA [Aeromicrobium marinum DSM 15272] gi|311313178|gb|EFQ83089.1| NAD-dependent DNA ligase LigA [Aeromicrobium marinum DSM 15272] Length = 782 Score = 74.5 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V L EA EV L++ ++ YY D L D YD +L+A++ + PEL Sbjct: 9 PVPDLD--EARAEVTTLLERIAEAREAYYGQDASLVDDATYDGWLRQLEAVERRHPELQG 66 Query: 110 EDHPWNTVG 118 +D P VG Sbjct: 67 QDSPTLNVG 75 >gi|217032016|ref|ZP_03437517.1| hypothetical protein HPB128_187g43 [Helicobacter pylori B128] gi|216946326|gb|EEC24932.1| hypothetical protein HPB128_187g43 [Helicobacter pylori B128] Length = 458 Score = 74.5 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + + YL HH YY LDDP+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIAYL-NTLSHH---YYNLDDPIVSDAVYDELYQELKAYEEKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|32267302|ref|NP_861334.1| NAD-dependent DNA ligase LigA [Helicobacter hepaticus ATCC 51449] gi|81665265|sp|Q7VF74|DNLJ_HELHP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|32263355|gb|AAP78400.1| DNA ligase [Helicobacter hepaticus ATCC 51449] Length = 650 Score = 74.5 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ E +V+ L K+A H YY LD+P+ TD YD + ++ +E+ P L D P Sbjct: 1 MTSQEYYTQVQILKKMAYH----YYVLDEPIATDEQYDSLYHQIVRFEEENPHLIDASSP 56 Query: 114 WNTVG 118 VG Sbjct: 57 TQRVG 61 >gi|297571016|ref|YP_003696790.1| DNA ligase, NAD-dependent [Arcanobacterium haemolyticum DSM 20595] gi|296931363|gb|ADH92171.1| DNA ligase, NAD-dependent [Arcanobacterium haemolyticum DSM 20595] Length = 843 Score = 74.5 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 32/64 (50%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + +A + + L L Q+ YY D + D YD + L AL+E+FP+L+ D P Sbjct: 8 NFDDAQVRWQELAPQLLDAQETYYSTGDQVMVDATYDALMRELRALEEEFPQLWSPDSPS 67 Query: 115 NTVG 118 VG Sbjct: 68 TKVG 71 >gi|317014035|gb|ADU81471.1| NAD-dependent DNA ligase LigA [Helicobacter pylori Gambia94/24] Length = 656 Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL HH YY LD+P+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYL-NTLSHH---YYNLDEPIVSDAVYDELYQELKAYEEENPNRIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|58038653|ref|YP_190617.1| NAD-dependent DNA ligase [Gluconobacter oxydans 621H] gi|81352629|sp|Q5FUI5|DNLJ_GLUOX RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|58001067|gb|AAW59961.1| NAD-dependent DNA ligase [Gluconobacter oxydans 621H] Length = 683 Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A L + Y+ D+P +D +YD L AL+E +P+L ++ VG Sbjct: 8 AAERHAALEADLAQWDEAYHGRDEPEVSDAVYDAARRELLALEEAYPDLRSQEGASQRVG 67 >gi|308071012|ref|YP_003872617.1| DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) [Paenibacillus polymyxa E681] gi|305860291|gb|ADM72079.1| DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) [Paenibacillus polymyxa E681] Length = 680 Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 M +E LV + YY LD+P +D YD + + L AL++ L D P VG Sbjct: 13 MHRMEQLVAELNTYNYHYYTLDEPKISDKEYDVLYDELVALEQT-SGLVLPDSPTQRVG 70 >gi|315656502|ref|ZP_07909391.1| NAD-dependent DNA ligase LigA [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315493061|gb|EFU82663.1| NAD-dependent DNA ligase LigA [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 799 Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 6/68 (8%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPL-----FTDGLYDRVSERLDALQEQFPELFDE 110 A+ + LV + YY P +D YD + +L L+ +P+L Sbjct: 9 PESALAQHADLVDQIEAARTDYY-DQTPETGVTRLSDAEYDALFVQLQLLEAAYPDLVTP 67 Query: 111 DHPWNTVG 118 D P TVG Sbjct: 68 DSPTQTVG 75 >gi|315655583|ref|ZP_07908481.1| NAD-dependent DNA ligase LigA [Mobiluncus curtisii ATCC 51333] gi|315489647|gb|EFU79274.1| NAD-dependent DNA ligase LigA [Mobiluncus curtisii ATCC 51333] Length = 794 Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 6/68 (8%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPL-----FTDGLYDRVSERLDALQEQFPELFDE 110 A+ + LV + YY P +D YD + +L L+ +P+L Sbjct: 8 PESALAQHADLVDQIEAARTDYY-DQTPETGVTRLSDAEYDALFVQLQLLEAAYPDLVTP 66 Query: 111 DHPWNTVG 118 D P TVG Sbjct: 67 DSPTQTVG 74 >gi|304390721|ref|ZP_07372673.1| NAD-dependent DNA ligase LigA [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304325604|gb|EFL92850.1| NAD-dependent DNA ligase LigA [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 799 Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 6/68 (8%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPL-----FTDGLYDRVSERLDALQEQFPELFDE 110 A+ + LV + YY P +D YD + +L L+ +P+L Sbjct: 9 PESALAQHADLVDQIEAARTDYY-DQTPETGVTRLSDAEYDALFVQLQLLEAAYPDLVTP 67 Query: 111 DHPWNTVG 118 D P TVG Sbjct: 68 DSPTQTVG 75 >gi|298345134|ref|YP_003717821.1| DNA ligase (NAD(+)) [Mobiluncus curtisii ATCC 43063] gi|298235195|gb|ADI66327.1| DNA ligase (NAD(+)) [Mobiluncus curtisii ATCC 43063] Length = 799 Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 6/68 (8%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPL-----FTDGLYDRVSERLDALQEQFPELFDE 110 A+ + LV + YY P +D YD + +L L+ +P+L Sbjct: 9 PESALAQHADLVDQIEAARTDYY-DQTPETGVTRLSDAEYDALFVQLQLLEAAYPDLVTP 67 Query: 111 DHPWNTVG 118 D P TVG Sbjct: 68 DSPTQTVG 75 >gi|109947386|ref|YP_664614.1| NAD-dependent DNA ligase LigA [Helicobacter acinonychis str. Sheeba] gi|123362647|sp|Q17XL1|DNLJ_HELAH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|109714607|emb|CAJ99615.1| DNA ligase [Helicobacter acinonychis str. Sheeba] Length = 654 Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL HH YY LD+P+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYL-NTLSHH---YYNLDEPIVSDAVYDELYQELKAYEEKNPSQIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|15835041|ref|NP_296800.1| NAD-dependent DNA ligase LigA [Chlamydia muridarum Nigg] gi|270285206|ref|ZP_06194600.1| NAD-dependent DNA ligase LigA [Chlamydia muridarum Nigg] gi|270289225|ref|ZP_06195527.1| NAD-dependent DNA ligase LigA [Chlamydia muridarum Weiss] gi|301336602|ref|ZP_07224804.1| NAD-dependent DNA ligase LigA [Chlamydia muridarum MopnTet14] gi|13626415|sp|Q9PKP2|DNLJ_CHLMU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|7190466|gb|AAF39279.1| DNA ligase [Chlamydia muridarum Nigg] Length = 660 Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 20/49 (40%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 L + H + YY LD P +D YD L ++ Q PE P Sbjct: 12 LCTELIEHDRRYYVLDRPTISDYSYDMKMRELQKIEAQHPEWKVPWSPT 60 >gi|317968248|ref|ZP_07969638.1| NAD-dependent DNA ligase LigA [Synechococcus sp. CB0205] Length = 239 Score = 74.1 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 22/59 (37%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + YY LD P+ D +YDR+ L L+ L D P VG Sbjct: 9 QARASELRDLLNRAAHAYYVLDAPVMEDPVYDRLYRELLDLENADASLISADSPTQRVG 67 >gi|207092489|ref|ZP_03240276.1| NAD-dependent DNA ligase LigA [Helicobacter pylori HPKX_438_AG0C1] Length = 656 Score = 74.1 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + + YL HH YY LDDP+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIAYL-NTLSHH---YYNLDDPIVSDAVYDELYQELKAYEEKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|15611625|ref|NP_223276.1| NAD-dependent DNA ligase LigA [Helicobacter pylori J99] gi|7674020|sp|Q9ZLM1|DNLJ_HELPJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|4155109|gb|AAD06141.1| DNA LIGASE [Helicobacter pylori J99] Length = 656 Score = 74.1 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL HH YY LD+P+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYL-NTLSHH---YYNLDEPIVSDAVYDELYQELKAYEEENPNRIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|313681943|ref|YP_004059681.1| DNA ligase, nad-dependent [Sulfuricurvum kujiense DSM 16994] gi|313154803|gb|ADR33481.1| DNA ligase, NAD-dependent [Sulfuricurvum kujiense DSM 16994] Length = 676 Score = 74.1 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ + VE L K + H YY LDDP+ TD YD + ++ A + + P D P Sbjct: 1 MTQTDYKNAVEQLKKYSYH----YYVLDDPITTDEEYDILYHKVVAYEHEHPSEIISDSP 56 Query: 114 WNTVG 118 VG Sbjct: 57 TQRVG 61 >gi|298736308|ref|YP_003728834.1| NAD-dependent DNA ligase LigA [Helicobacter pylori B8] gi|298355498|emb|CBI66370.1| NAD-dependent DNA ligase LigA [Helicobacter pylori B8] Length = 656 Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + + YL HH YY LDDP+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIAYL-NTLSHH---YYNLDDPIVSDAVYDELYQELKAYEEKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|303254175|ref|ZP_07340287.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae BS455] gi|302598846|gb|EFL65880.1| NAD-dependent DNA ligase LigA [Streptococcus pneumoniae BS455] Length = 652 Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 26/58 (44%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + LV + + YY D+P +D YD + L L+ +P+ D P + VG Sbjct: 3 KRMNELVALLNRYATEYYTSDNPSVSDSEYDCLYRELVELETAYPDQVLADSPTHRVG 60 >gi|237753058|ref|ZP_04583538.1| NAD-dependent DNA ligase LigA [Helicobacter winghamensis ATCC BAA-430] gi|229375325|gb|EEO25416.1| NAD-dependent DNA ligase LigA [Helicobacter winghamensis ATCC BAA-430] Length = 666 Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 27/54 (50%) Query: 65 YLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +K K YY LDDP+ +D YD + ++ A + Q P+ +D P VG Sbjct: 8 QAIKTLNLWAKHYYVLDDPIASDEEYDLLYHKVLAYEAQNPQFIAQDSPTQRVG 61 >gi|71892277|ref|YP_278011.1| DNA ligase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|123747814|sp|Q492G5|DNLJ_BLOPB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|71796383|gb|AAZ41134.1| DNA ligase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 595 Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L K H + YY ++ +D YD + E+L+ L++ +P L E P +G Sbjct: 4 VKQKIQKLRKKLRHWEYLYYTKNESAVSDEKYDAMLEKLNQLEQIYPHLIAESSPTQRIG 63 >gi|108563021|ref|YP_627337.1| NAD-dependent DNA ligase LigA [Helicobacter pylori HPAG1] gi|123246990|sp|Q1CTQ9|DNLJ_HELPH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|107836794|gb|ABF84663.1| DNA ligase [Helicobacter pylori HPAG1] Length = 656 Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + + YL HH YY LDDP+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIAYL-NTLSHH---YYNLDDPIVSDAVYDELYQELKAYEEKNPSHIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|227542668|ref|ZP_03972717.1| NAD-dependent DNA ligase LigA [Corynebacterium glucuronolyticum ATCC 51866] gi|227181551|gb|EEI62523.1| NAD-dependent DNA ligase LigA [Corynebacterium glucuronolyticum ATCC 51866] Length = 679 Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L +H+ YY P TD +D + +L L+ + P L D P VG Sbjct: 7 ARWEELAAQVRYHRDKYY-NGTPEITDAEFDVLFSQLQQLEAEHPGLRAPDSPTLEVG 63 >gi|227488027|ref|ZP_03918343.1| NAD-dependent DNA ligase LigA [Corynebacterium glucuronolyticum ATCC 51867] gi|227091889|gb|EEI27201.1| NAD-dependent DNA ligase LigA [Corynebacterium glucuronolyticum ATCC 51867] Length = 679 Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L +H+ YY P TD +D + +L L+ + P L D P VG Sbjct: 7 ARWEELAAQVRYHRDKYY-NGTPEITDAEFDVLFSQLQQLEAEHPGLRAPDSPTLEVG 63 >gi|254476645|ref|ZP_05090031.1| DNA ligase, NAD-dependent [Ruegeria sp. R11] gi|214030888|gb|EEB71723.1| DNA ligase, NAD-dependent [Ruegeria sp. R11] Length = 783 Score = 73.7 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 34/91 (37%), Gaps = 8/91 (8%) Query: 36 PNKRALESWLDKAKKVTS--------LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTD 87 P+ L +A VT L+ EA E L Y++ D P +D Sbjct: 17 PSPYHLSKDKKEATDVTQPGDMDPQSLTLEEARPLFEQLQDELRAADLAYHQKDAPEISD 76 Query: 88 GLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YD + AL E FP L E +TVG Sbjct: 77 ADYDAKKRQYRALAEAFPNLAAEATELDTVG 107 >gi|330994412|ref|ZP_08318338.1| DNA ligase [Gluconacetobacter sp. SXCC-1] gi|329758538|gb|EGG75056.1| DNA ligase [Gluconacetobacter sp. SXCC-1] Length = 712 Score = 73.7 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 2/83 (2%) Query: 38 KRALESWLDKAKKVTSLSKGE--AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 R E ++ + A + L + Y++ D PL D YD + + Sbjct: 8 PRPAEQARRLLADYATMEQDAPNAEKALTQLATLLPALDAAYHQHDAPLVDDATYDSLRQ 67 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L+ +FP+L D P VG Sbjct: 68 LNTRLEARFPDLRRTDSPAQQVG 90 >gi|160914436|ref|ZP_02076651.1| hypothetical protein EUBDOL_00440 [Eubacterium dolichum DSM 3991] gi|158433594|gb|EDP11883.1| hypothetical protein EUBDOL_00440 [Eubacterium dolichum DSM 3991] Length = 664 Score = 73.7 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + + L KI YY LD P +D YDR + L L+++FP+ D + VG Sbjct: 2 SQQRILELRKILDRLAYEYYVLDKPSVSDQEYDRYYQELLKLEDEFPQYRDPNSITQRVG 61 >gi|77409440|ref|ZP_00786135.1| DNA ligase, NAD-dependent [Streptococcus agalactiae COH1] gi|77171952|gb|EAO75126.1| DNA ligase, NAD-dependent [Streptococcus agalactiae COH1] Length = 643 Score = 73.7 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 24/44 (54%) Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 K YY D+P +D YD++ L L+EQ PE + P + VG Sbjct: 8 KEYYTQDNPTVSDSQYDQLYRELVELEEQHPENILPNSPTHRVG 51 >gi|319441119|ref|ZP_07990275.1| NAD-dependent DNA ligase LigA [Corynebacterium variabile DSM 44702] Length = 702 Score = 73.7 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 1/71 (1%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 K + S + L HH+ YY +P+ TD +D + L +L+ + PE Sbjct: 16 KQTTSPTASPDDPAERWSALAAEIRHHRDLYYYR-EPVITDAEFDTMMRELQSLEAEHPE 74 Query: 107 LFDEDHPWNTV 117 + P V Sbjct: 75 VVTGPSPTTEV 85 >gi|293401241|ref|ZP_06645385.1| DNA ligase, NAD-dependent [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305367|gb|EFE46612.1| DNA ligase, NAD-dependent [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 662 Score = 73.7 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 26/61 (42%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + + L K + YY LD P D YD+ + L L++ +P+ D + V Sbjct: 2 DVQQRILALRKQLDTYAYEYYVLDQPSVPDAEYDQAYQELLKLEDTYPQYRDPNSITQRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|254442845|ref|ZP_05056321.1| DNA ligase, NAD-dependent [Verrucomicrobiae bacterium DG1235] gi|198257153|gb|EDY81461.1| DNA ligase, NAD-dependent [Verrucomicrobiae bacterium DG1235] Length = 718 Score = 73.7 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Query: 50 KVTSLSKGEAMI-EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + LS+ E + L H YYR P +D YD + L L+E +P+L Sbjct: 41 DTSKLSEEERGRGRLVELRAEIARHDDLYYRKAAPEISDADYDALKRELHRLEELYPDL 99 >gi|317009372|gb|ADU79952.1| NAD-dependent DNA ligase LigA [Helicobacter pylori India7] Length = 656 Score = 73.4 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + + YL HH YY LDDP+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIGYL-NTLSHH---YYNLDDPIVSDAVYDELYQELKAYEEKNPSHIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|224372650|ref|YP_002607022.1| NAD-dependent DNA ligase LigA [Nautilia profundicola AmH] gi|254781379|sp|B9L8R4|DNLJ_NAUPA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|223589900|gb|ACM93636.1| DNA ligase, NAD-dependent [Nautilia profundicola AmH] Length = 656 Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 26/52 (50%) Query: 67 VKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V +YY LD+PL TD YD++ ++ +++ P+ D P VG Sbjct: 12 VDTLKKWAYYYYVLDNPLVTDEEYDKLYHEVEEYEKKHPDKIDPTSPTQRVG 63 >gi|85702769|ref|ZP_01033873.1| DNA ligase, NAD-dependent [Roseovarius sp. 217] gi|85671697|gb|EAQ26554.1| DNA ligase, NAD-dependent [Roseovarius sp. 217] Length = 866 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 32/74 (43%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + V L++ EA E+ L + + Y+ D P TD YD + R A++ + Sbjct: 1 MTDRIAVEDLTEDEARTELARLAALLAEANRAYHTEDAPEITDAAYDALKARNAAIEARL 60 Query: 105 PELFDEDHPWNTVG 118 P L D + VG Sbjct: 61 PALKRADSASDQVG 74 >gi|255533202|ref|YP_003093574.1| DNA ligase, NAD-dependent [Pedobacter heparinus DSM 2366] gi|255346186|gb|ACU05512.1| DNA ligase, NAD-dependent [Pedobacter heparinus DSM 2366] Length = 670 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S E ++ LVK H YY L P D +D+ E L L+ +PE D + P Sbjct: 1 MSGSEVKTNMDALVKELNQHSYNYYVLAMPTIADYTFDKKLEELAQLELAYPEFADPNSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 TRKVG 65 >gi|88658391|ref|YP_507122.1| DNA ligase, NAD-dependent [Ehrlichia chaffeensis str. Arkansas] gi|123763773|sp|Q2GHG1|DNLJ_EHRCR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|88599848|gb|ABD45317.1| DNA ligase, NAD-dependent [Ehrlichia chaffeensis str. Arkansas] Length = 676 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + +A +E++ L K HH YY D+P +D YD + + + + FP+L + Sbjct: 3 DQEKAKLELDKLNKQIQHHDVLYYVQDNPEISDAEYDELCRKRNLILNAFPKLTQSNDYQ 62 Query: 115 NTVG 118 N +G Sbjct: 63 NNIG 66 >gi|67458584|ref|YP_246208.1| NAD-dependent DNA ligase LigA [Rickettsia felis URRWXCal2] gi|67004117|gb|AAY61043.1| DNA ligase, NAD-dependent [Rickettsia felis URRWXCal2] Length = 706 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%) Query: 70 ALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + YY D+PL +D YD++ L+++FP L E+ P +G Sbjct: 40 IAAYNHAYYIEDNPLVSDSEYDQLFNTNLKLEQKFPHLVLENSPSKKIG 88 >gi|152990877|ref|YP_001356599.1| NAD-dependent DNA ligase LigA [Nitratiruptor sp. SB155-2] gi|166216219|sp|A6Q433|DNLJ_NITSB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|151422738|dbj|BAF70242.1| DNA ligase, NAD-dependent [Nitratiruptor sp. SB155-2] Length = 660 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 26/58 (44%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E + V+ YY LD+P D +YD++ ++ ++ P+ D P +G Sbjct: 6 QEYKEAVEKLKRWAYAYYVLDNPEVPDEVYDKLYREVEEYEKAHPDQIDPTSPTQRIG 63 >gi|229817979|ref|ZP_04448261.1| hypothetical protein BIFANG_03266 [Bifidobacterium angulatum DSM 20098] gi|229784583|gb|EEP20697.1| hypothetical protein BIFANG_03266 [Bifidobacterium angulatum DSM 20098] Length = 927 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 25/69 (36%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V+ + A L Q YY D P+ +D YD L L+ FP L + Sbjct: 71 DVSGMEADTAARLWAKLAAWVESDQIAYYIDDAPVSSDAAYDARLRCLQRLEAAFPTLDN 130 Query: 110 EDHPWNTVG 118 P VG Sbjct: 131 PQSPTRRVG 139 >gi|88855225|ref|ZP_01129890.1| DNA ligase [marine actinobacterium PHSC20C1] gi|88815753|gb|EAR25610.1| DNA ligase [marine actinobacterium PHSC20C1] Length = 775 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 30/62 (48%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 A EV L L + YY D+ L D YD + +RL+ L+ + PEL +D P Sbjct: 27 AAARDEVGTLSTRILELRDAYYERDEVLVDDAEYDELIQRLERLEREHPELQSQDSPTLR 86 Query: 117 VG 118 VG Sbjct: 87 VG 88 >gi|134034096|sp|Q4UN15|DNLJ_RICFE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 689 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%) Query: 70 ALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + YY D+PL +D YD++ L+++FP L E+ P +G Sbjct: 23 IAAYNHAYYIEDNPLVSDSEYDQLFNTNLKLEQKFPHLVLENSPSKKIG 71 >gi|313678467|ref|YP_004056207.1| DNA ligase (NAD+) [Mycoplasma bovis PG45] gi|312950136|gb|ADR24731.1| DNA ligase (NAD+) [Mycoplasma bovis PG45] Length = 654 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + A ++ LV YY+L+ P +D YD+ L+ L++++PE +D P Sbjct: 1 MESKNAKELIKSLVDKINQWNYEYYQLNKPSVSDLEYDKALWELEKLEKEYPEFVLDDSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 TFKLG 65 >gi|308063596|gb|ADO05483.1| NAD-dependent DNA ligase LigA [Helicobacter pylori Sat464] Length = 656 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL HH YY LDDP+ +D +YD + + L +E+ P + P Sbjct: 4 SQKEYLERIEYL-NTLSHH---YYNLDDPIVSDAVYDELYQELKVYEEKNPNNIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|297243530|ref|ZP_06927462.1| NAD-dependent DNA ligase, BRCT type II [Gardnerella vaginalis AMD] gi|296888575|gb|EFH27315.1| NAD-dependent DNA ligase, BRCT type II [Gardnerella vaginalis AMD] Length = 922 Score = 72.6 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 39/104 (37%), Gaps = 2/104 (1%) Query: 15 NEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQ 74 +E N T +K T A+ P + + +L+ +A L A Q Sbjct: 20 DEQNETHENTQKTDTWIAQLQPTDTDALALGNLQP--ATLTIEQAAKLWAKLAAWAQSDQ 77 Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 YY D P +D YD L AL+ FP L P + VG Sbjct: 78 IAYYVEDSPTSSDAAYDARMRALSALEAAFPTLDTPQSPTHRVG 121 >gi|189485424|ref|YP_001956365.1| DNA ligase (NAD+) [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|254781446|sp|B1H072|DNLJ_UNCTG RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|170287383|dbj|BAG13904.1| DNA ligase (NAD+) [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 674 Score = 72.6 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 31/64 (48%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + G ++YL K + H YY ++P +D YD +++ L+ ++++ P D P Sbjct: 1 MIMGNIQNRIDYLRKELIRHNGLYYESNNPEISDSEYDNLAKELEQIEKENPLFALPDSP 60 Query: 114 WNTV 117 + Sbjct: 61 TKKI 64 >gi|68536402|ref|YP_251107.1| NAD-dependent DNA ligase LigA [Corynebacterium jeikeium K411] gi|123748223|sp|Q4JUL8|DNLJ_CORJK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|68264001|emb|CAI37489.1| DNA ligase [Corynebacterium jeikeium K411] Length = 695 Score = 72.6 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + L HH++ YY +P +D +D + + L L++ PE+ P V Sbjct: 4 QSRWQELADQVRHHRQLYY-YGEPEISDADFDALLQELKDLEQAHPEVVTGASPTEEV 60 >gi|291456400|ref|ZP_06595790.1| DNA ligase, NAD-dependent [Bifidobacterium breve DSM 20213] gi|291381677|gb|EFE89195.1| DNA ligase, NAD-dependent [Bifidobacterium breve DSM 20213] Length = 930 Score = 72.6 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 27/69 (39%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V +L+ A + Q YY D P+ +D YD L L+ FP L + Sbjct: 53 DVNTLNAEVAARLWARVAAWVEADQIAYYIDDAPVSSDAAYDARLRCLQKLEAAFPSLDN 112 Query: 110 EDHPWNTVG 118 P + VG Sbjct: 113 PQSPTHRVG 121 >gi|254390812|ref|ZP_05006024.1| DNA ligase [Streptomyces clavuligerus ATCC 27064] gi|197704511|gb|EDY50323.1| DNA ligase [Streptomyces clavuligerus ATCC 27064] Length = 730 Score = 72.6 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 A L + H+ YY D P+ +D +DR+ L+ L+E+ P L D P Sbjct: 10 PARARERHAELAEQIEEHRFRYYVKDQPVISDSEFDRLLRSLEELEERHPALCTPDSPTQ 69 Query: 116 TV 117 V Sbjct: 70 KV 71 >gi|116511279|ref|YP_808495.1| NAD-dependent DNA ligase LigA [Lactococcus lactis subsp. cremoris SK11] gi|122940331|sp|Q031P9|DNLJ_LACLS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116106933|gb|ABJ72073.1| NAD-dependent DNA ligase [Lactococcus lactis subsp. cremoris SK11] Length = 686 Score = 72.6 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ YY LD+P D YDR+ L L+++ P+L D P + G Sbjct: 3 IESKIKEFTDQLNQFAYEYYTLDEPSVEDSEYDRLYHELVKLEQENPQLVRADSPTHWTG 62 >gi|260577534|ref|ZP_05845474.1| DNA ligase [Corynebacterium jeikeium ATCC 43734] gi|258604338|gb|EEW17575.1| DNA ligase [Corynebacterium jeikeium ATCC 43734] Length = 688 Score = 72.6 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + L HH++ YY +P +D +D + + L L++ PE+ P V Sbjct: 4 QSRWQELADQVRHHRQLYY-YGEPEISDADFDALLQELKDLEQAHPEVVTGASPTEEV 60 >gi|294815250|ref|ZP_06773893.1| DNA ligase [Streptomyces clavuligerus ATCC 27064] gi|326443605|ref|ZP_08218339.1| NAD-dependent DNA ligase LigA [Streptomyces clavuligerus ATCC 27064] gi|294327849|gb|EFG09492.1| DNA ligase [Streptomyces clavuligerus ATCC 27064] Length = 767 Score = 72.6 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 A L + H+ YY D P+ +D +DR+ L+ L+E+ P L D P Sbjct: 47 PARARERHAELAEQIEEHRFRYYVKDQPVISDSEFDRLLRSLEELEERHPALCTPDSPTQ 106 Query: 116 TV 117 V Sbjct: 107 KV 108 >gi|51598803|ref|YP_072991.1| NAD-dependent DNA ligase LigA [Borrelia garinii PBi] gi|81609923|sp|Q660X2|DNLJ_BORGA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|51573374|gb|AAU07399.1| DNA ligase [Borrelia garinii PBi] Length = 660 Score = 72.6 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 25/61 (40%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + E+E L K+ K YY P D +YD RL L+ + PE D P Sbjct: 4 KIQQEIEDLKKLIRKWDKEYYVDSLPSVEDFVYDNHILRLKELESRHPEYKTLDSPTLKF 63 Query: 118 G 118 G Sbjct: 64 G 64 >gi|261409569|ref|YP_003245810.1| NAD-dependent DNA ligase LigA [Paenibacillus sp. Y412MC10] gi|261286032|gb|ACX68003.1| DNA ligase, NAD-dependent [Paenibacillus sp. Y412MC10] Length = 670 Score = 72.2 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L+ ++ YY LD PL +D YD + ++L AL+ + + D P VG Sbjct: 4 KEKMEKLIAELNNYNYHYYTLDQPLVSDKEYDALYDQLVALEAE-TGVTLPDSPTQRVG 61 >gi|329924834|ref|ZP_08279795.1| DNA ligase (NAD+) [Paenibacillus sp. HGF5] gi|328940396|gb|EGG36721.1| DNA ligase (NAD+) [Paenibacillus sp. HGF5] Length = 670 Score = 72.2 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E L+ ++ YY LD PL +D YD + ++L AL+ + + D P VG Sbjct: 4 KEKMEKLIAELNNYNYHYYTLDQPLVSDKEYDALYDQLVALEAE-TGVTLPDSPTQRVG 61 >gi|313898151|ref|ZP_07831690.1| DNA ligase (NAD+) [Clostridium sp. HGF2] gi|312957179|gb|EFR38808.1| DNA ligase (NAD+) [Clostridium sp. HGF2] Length = 665 Score = 72.2 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + + L I YY LD P +D YDR + L AL+++FP+ D + VG Sbjct: 2 SQQRILELRSILDRLAYEYYVLDQPSKSDQEYDRYYQELVALEDEFPQYRDPNSITQRVG 61 >gi|187918415|ref|YP_001883978.1| NAD-dependent DNA ligase LigA [Borrelia hermsii DAH] gi|254781263|sp|B2S0Q2|DNLJ_BORHD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|119861263|gb|AAX17058.1| NAD-dependent DNA ligase [Borrelia hermsii DAH] Length = 669 Score = 71.8 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ L I + YY P D YD+ RL L+ ++PE D P Sbjct: 3 EDVEDEILRLKNIIKRWNREYYVDSSPSVGDLTYDKALLRLQDLESKYPEYKTLDSPTFR 62 Query: 117 VG 118 G Sbjct: 63 FG 64 >gi|293363574|ref|ZP_06610330.1| DNA ligase (NAD(+)) [Mycoplasma alligatoris A21JP2] gi|292552923|gb|EFF41677.1| DNA ligase (NAD(+)) [Mycoplasma alligatoris A21JP2] Length = 660 Score = 71.8 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 K E + + L++ YY LD P TD +YD+ + L ++ +PE E+ P Sbjct: 2 KPEILERYKRLIENLNKWNNEYYNLDTPSVTDEVYDQEYQELLEIESMYPEAILENSPSQ 61 Query: 116 TVG 118 +G Sbjct: 62 IIG 64 >gi|298252820|ref|ZP_06976614.1| NAD-dependent DNA ligase, BRCT type II [Gardnerella vaginalis 5-1] gi|297533184|gb|EFH72068.1| NAD-dependent DNA ligase, BRCT type II [Gardnerella vaginalis 5-1] Length = 962 Score = 71.8 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 43/112 (38%), Gaps = 6/112 (5%) Query: 11 SKFENEHNITPA-QWKKLLTLE---AKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYL 66 SK +N+ ++ A +W + E A P + + +L+ +A L Sbjct: 52 SKTDNKTDMYEANEWNSTIDTEKWIANLKPTDTDALTLGNLQP--ATLTIEQAAKLWAKL 109 Query: 67 VKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A Q YY D P +D YD L AL+ FP L P + VG Sbjct: 110 AAWAQSDQIAYYVEDSPTSSDAAYDARMRALSALEAAFPTLDTPQSPTHRVG 161 >gi|163736311|ref|ZP_02143730.1| DNA ligase, NAD-dependent [Phaeobacter gallaeciensis BS107] gi|161390181|gb|EDQ14531.1| DNA ligase, NAD-dependent [Phaeobacter gallaeciensis BS107] Length = 752 Score = 71.8 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 28/69 (40%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 + SL+ EA L Y++ DDP +D YD AL E FPEL D Sbjct: 8 NLKSLTSDEARARFLLLQDELRAADLAYHQADDPEISDADYDAKKREYRALAEHFPELAD 67 Query: 110 EDHPWNTVG 118 TVG Sbjct: 68 GATALETVG 76 >gi|15645240|ref|NP_207410.1| NAD-dependent DNA ligase LigA [Helicobacter pylori 26695] gi|3182983|sp|O25336|DNLJ_HELPY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|2313737|gb|AAD07680.1| DNA ligase (lig) [Helicobacter pylori 26695] Length = 656 Score = 71.8 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + + YL HH YY LD+P+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIAYL-NTLSHH---YYNLDEPIVSDAIYDELYQELKAYEEKNPNGIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|152992057|ref|YP_001357778.1| NAD-dependent DNA ligase LigA [Sulfurovum sp. NBC37-1] gi|166216278|sp|A6Q7G2|DNLJ_SULNB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|151423918|dbj|BAF71421.1| DNA ligase, NAD-dependent [Sulfurovum sp. NBC37-1] Length = 648 Score = 71.8 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ E +V+ L K YY D+P+ TD YDR+ + + + P+ ED P Sbjct: 1 MTYDEYKEKVKTLKK----WAYAYYVEDNPVATDEEYDRLYHEVLDYEMKHPDKALEDSP 56 Query: 114 WNTVG 118 VG Sbjct: 57 TKRVG 61 >gi|39938924|ref|NP_950690.1| NAD-dependent DNA ligase [Onion yellows phytoplasma OY-M] gi|81402396|sp|Q6YQD6|DNLJ_ONYPE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|39722033|dbj|BAD04523.1| NAD-dependent DNA ligase [Onion yellows phytoplasma OY-M] Length = 671 Score = 71.8 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ LVK YY L +P +D YD + + L L+ ++P+ P +G Sbjct: 7 IKQKIKSLVKQLTKANYQYYNLSNPDLSDQQYDALLKELINLETRYPQFKLPYSPTLKIG 66 >gi|302344112|ref|YP_003808641.1| DNA ligase, NAD-dependent [Desulfarculus baarsii DSM 2075] gi|301640725|gb|ADK86047.1| DNA ligase, NAD-dependent [Desulfarculus baarsii DSM 2075] Length = 691 Score = 71.8 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 24/64 (37%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S A V L + + YY D LYD+ L+ L+ FP L D P Sbjct: 5 SLSAAARRVAQLSEELRRWSRVYYNEGRQEVADALYDQRFAELEELERLFPMLRLADSPT 64 Query: 115 NTVG 118 VG Sbjct: 65 RRVG 68 >gi|34558095|ref|NP_907910.1| NAD-dependent DNA ligase LigA [Wolinella succinogenes DSM 1740] gi|81653397|sp|Q7M8A0|DNLJ_WOLSU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|34483813|emb|CAE10810.1| DNA LIGASE POLYDEOXYRIBONUCLEOTIDE SYNTHASE [NAD+] [Wolinella succinogenes] Length = 650 Score = 71.4 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 4/65 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + +E L YY LD PL TD YD++ A + Q PE P Sbjct: 1 MNPDQYSQAIERL----NAWAHAYYVLDAPLATDEEYDQLYHEALAFERQNPERIHPASP 56 Query: 114 WNTVG 118 +G Sbjct: 57 TQRIG 61 >gi|283783245|ref|YP_003373999.1| DNA ligase (NAD(+)) [Gardnerella vaginalis 409-05] gi|283441754|gb|ADB14220.1| DNA ligase (NAD(+)) [Gardnerella vaginalis 409-05] Length = 962 Score = 71.4 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 43/112 (38%), Gaps = 6/112 (5%) Query: 11 SKFENEHNITPA-QWKKLLTLE---AKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYL 66 SK +N+ ++ A +W + E A P + + +L+ +A L Sbjct: 52 SKTDNKTDMHEANEWNSTIDTEKWIANLKPTDTDALALGNLQP--ATLTIEQAAKLWAKL 109 Query: 67 VKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A Q YY D P +D YD L AL+ FP L P + VG Sbjct: 110 AAWAQSDQIAYYVEDSPTSSDAAYDARMRALSALEAAFPTLDTPQSPTHRVG 161 >gi|160940658|ref|ZP_02088001.1| hypothetical protein CLOBOL_05552 [Clostridium bolteae ATCC BAA-613] gi|158436393|gb|EDP14160.1| hypothetical protein CLOBOL_05552 [Clostridium bolteae ATCC BAA-613] Length = 699 Score = 71.4 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 4/90 (4%) Query: 30 LEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGL 89 L F NK+ +E+ + K + LS+ I + +LVK ++ YY ++ P +D + Sbjct: 10 LSNTFNDNKKIMEAHM-KQNQNEHLSQE--AIRIHHLVKQLNQYRHEYYNMNAPSVSDAV 66 Query: 90 YDRVSERLDALQEQFPELFDEDHPWNTVGY 119 YD + + LDAL+++ + + P TVGY Sbjct: 67 YDCLFDELDALEKR-TGIILSNSPTQTVGY 95 >gi|317012429|gb|ADU83037.1| NAD-dependent DNA ligase LigA [Helicobacter pylori Lithuania75] Length = 656 Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + + YL HH YY LD+P+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIAYL-NTLSHH---YYNLDEPIVSDAIYDELYQELKAYEEKNPNDIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|308189932|ref|YP_003922863.1| DNA ligase (NAD(+)) [Mycoplasma fermentans JER] gi|238809881|dbj|BAH69671.1| hypothetical protein [Mycoplasma fermentans PG18] gi|307624674|gb|ADN68979.1| DNA ligase (NAD(+)) [Mycoplasma fermentans JER] Length = 664 Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 33/66 (50%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +++ + ++ L K YY+ ++P +D YD+ + L+ L++++P+ + Sbjct: 4 AMNALDIKKKIIELSNKLNQWNKEYYQDNNPSVSDFEYDKALQELEQLEKKYPQFIYVNS 63 Query: 113 PWNTVG 118 P +G Sbjct: 64 PTQKLG 69 >gi|307720805|ref|YP_003891945.1| DNA ligase, NAD-dependent [Sulfurimonas autotrophica DSM 16294] gi|306978898|gb|ADN08933.1| DNA ligase, NAD-dependent [Sulfurimonas autotrophica DSM 16294] Length = 650 Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 30/59 (50%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E + V+ YY LDDP+ TD +YD++ + ++ +E PE ++ P VG Sbjct: 3 KQEYKQAVEKLNLWAYHYYVLDDPIMTDEVYDKLYKEVEQYEEAHPEDILKNSPTQRVG 61 >gi|228904740|ref|ZP_04068794.1| DNA ligase [Bacillus thuringiensis IBL 4222] gi|228854754|gb|EEM99358.1| DNA ligase [Bacillus thuringiensis IBL 4222] Length = 656 Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +LV YY +D P+ +D YDR+ + L ++E PE P N VG Sbjct: 5 RARYLHLVGELTMLNHHYYTMDKPIASDAEYDRLYDELVKIEELHPEWTVAHSPSNRVG 63 >gi|88803633|ref|ZP_01119157.1| putative DNA ligase [Polaribacter irgensii 23-P] gi|88780366|gb|EAR11547.1| putative DNA ligase [Polaribacter irgensii 23-P] Length = 665 Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 31/60 (51%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A ++ L H YY LD+ + +D +D ++L+ L+++ P LFD + P VG Sbjct: 3 AAQTIQLLRDELNTHNYNYYVLDNGMISDFDFDVKLKKLEQLEKENPLLFDANSPTQRVG 62 >gi|219685109|ref|ZP_03539929.1| DNA ligase, NAD-dependent [Borrelia garinii Far04] gi|219673205|gb|EED30224.1| DNA ligase, NAD-dependent [Borrelia garinii Far04] Length = 660 Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 25/61 (40%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + E+E L K+ K YY P D +YD RL L+ + PE D P Sbjct: 4 KIQQEIENLKKLIRKWDKEYYVDSLPSVEDFVYDNHILRLKELESKHPEYKTLDSPTLKF 63 Query: 118 G 118 G Sbjct: 64 G 64 >gi|216263494|ref|ZP_03435489.1| DNA ligase, NAD-dependent [Borrelia afzelii ACA-1] gi|215980338|gb|EEC21159.1| DNA ligase, NAD-dependent [Borrelia afzelii ACA-1] Length = 660 Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ L K+ K YY P D +YD+ RL L+ ++PE D P Sbjct: 3 SKIQQEIADLKKLIRKWNKEYYVDSLPSVEDFVYDKHILRLQELESKYPEYKTLDSPTLK 62 Query: 117 VG 118 G Sbjct: 63 FG 64 >gi|183219642|ref|YP_001837638.1| DNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909780|ref|YP_001961335.1| DNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|190359263|sp|B0SA75|DNLJ_LEPBA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781356|sp|B0SKC1|DNLJ_LEPBP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|167774456|gb|ABZ92757.1| DNA ligase (NAD+) (contains BRCT domain type II) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778064|gb|ABZ96362.1| DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 671 Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 55 SKGE-AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +K E + L K H YY+ + P+ TD +D + + L L+ + P+L D P Sbjct: 5 TKAEDPKKRIITLRKEIGRHNDLYYKENAPVITDKEFDILVKELQKLESENPDLADVSSP 64 Query: 114 WNTVG 118 VG Sbjct: 65 TAQVG 69 >gi|319777211|ref|YP_004136862.1| DNA ligase [Mycoplasma fermentans M64] gi|318038286|gb|ADV34485.1| DNA ligase [Mycoplasma fermentans M64] Length = 660 Score = 71.0 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + ++ L K YY+ ++P +D YD+ + L+ L++++P+ + P Sbjct: 1 MNALDIKKKIIELSNKLNQWNKEYYQDNNPSVSDFEYDKALQELEQLEKKYPQFIYVNSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 TQKLG 65 >gi|308061946|gb|ADO03834.1| NAD-dependent DNA ligase LigA [Helicobacter pylori Cuz20] Length = 656 Score = 71.0 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL HH YY LDD + +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYL-NTLSHH---YYNLDDSIVSDAVYDELYQELKAYEEKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|307700359|ref|ZP_07637399.1| DNA ligase (NAD+) [Mobiluncus mulieris FB024-16] gi|307614570|gb|EFN93799.1| DNA ligase (NAD+) [Mobiluncus mulieris FB024-16] Length = 917 Score = 71.0 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 8/68 (11%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDP------LFTDGLYDRVSERLDALQEQFPELFD 109 + E + LV + YY D+P +D YD + RL L+ +P L Sbjct: 8 PPQIQNEHQELVAQIEAARADYY--DNPDEHGVTRLSDADYDALFVRLQLLEGSYPALVT 65 Query: 110 EDHPWNTV 117 D P TV Sbjct: 66 PDSPTQTV 73 >gi|306818992|ref|ZP_07452709.1| NAD-dependent DNA ligase LigA [Mobiluncus mulieris ATCC 35239] gi|304648185|gb|EFM45493.1| NAD-dependent DNA ligase LigA [Mobiluncus mulieris ATCC 35239] Length = 917 Score = 71.0 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 8/68 (11%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDP------LFTDGLYDRVSERLDALQEQFPELFD 109 + E + LV + YY D+P +D YD + RL L+ +P L Sbjct: 8 PPQIQNEHQELVAQIEAARADYY--DNPDEHGVTRLSDADYDALFVRLQLLEGSYPALVT 65 Query: 110 EDHPWNTV 117 D P TV Sbjct: 66 PDSPTQTV 73 >gi|227875717|ref|ZP_03993845.1| DNA ligase (NAD(+)) [Mobiluncus mulieris ATCC 35243] gi|269976734|ref|ZP_06183710.1| DNA ligase, NAD-dependent [Mobiluncus mulieris 28-1] gi|227843659|gb|EEJ53840.1| DNA ligase (NAD(+)) [Mobiluncus mulieris ATCC 35243] gi|269935099|gb|EEZ91657.1| DNA ligase, NAD-dependent [Mobiluncus mulieris 28-1] Length = 917 Score = 71.0 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 8/68 (11%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDP------LFTDGLYDRVSERLDALQEQFPELFD 109 + E + LV + YY D+P +D YD + RL L+ +P L Sbjct: 8 PPQIQNEHQELVAQIEAARADYY--DNPDEHGVTRLSDADYDALFVRLQLLEGSYPALVT 65 Query: 110 EDHPWNTV 117 D P TV Sbjct: 66 PDSPTQTV 73 >gi|224418026|ref|ZP_03656032.1| NAD-dependent DNA ligase LigA [Helicobacter canadensis MIT 98-5491] gi|253827358|ref|ZP_04870243.1| DNA ligase, NAD-dependent [Helicobacter canadensis MIT 98-5491] gi|313141565|ref|ZP_07803758.1| DNA ligase polydeoxyribonucleotide synthase [Helicobacter canadensis MIT 98-5491] gi|253510764|gb|EES89423.1| DNA ligase, NAD-dependent [Helicobacter canadensis MIT 98-5491] gi|313130596|gb|EFR48213.1| DNA ligase polydeoxyribonucleotide synthase [Helicobacter canadensis MIT 98-5491] Length = 650 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 24/52 (46%) Query: 67 VKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +K K YY LDDP+ +D YD + ++ + P +D P VG Sbjct: 10 IKTLNLWAKHYYILDDPIASDEEYDALYHQIKEFEANNPTQISKDSPTQRVG 61 >gi|229819870|ref|YP_002881396.1| DNA ligase, NAD-dependent [Beutenbergia cavernae DSM 12333] gi|229565783|gb|ACQ79634.1| DNA ligase, NAD-dependent [Beutenbergia cavernae DSM 12333] Length = 782 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 27/61 (44%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EA L + + YY D P +D +D + L+AL+E PEL D P V Sbjct: 23 EAAHRWAELAQQVNDARFAYYVKDAPTLSDAAFDALLHELEALEESHPELRVPDSPTQQV 82 Query: 118 G 118 G Sbjct: 83 G 83 >gi|309800538|ref|ZP_07694688.1| DNA ligase [Streptococcus infantis SK1302] gi|308115831|gb|EFO53357.1| DNA ligase [Streptococcus infantis SK1302] Length = 315 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 29/58 (50%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV++ + YY D+P +D YDR+ L L++ P+ + P + VG Sbjct: 3 ERMKELVELLNRYATEYYTSDNPSVSDSEYDRLYRELVELEKARPDQVLPESPTHRVG 60 >gi|242309547|ref|ZP_04808702.1| DNA ligase polydeoxyribonucleotide synthase [Helicobacter pullorum MIT 98-5489] gi|239524118|gb|EEQ63984.1| DNA ligase polydeoxyribonucleotide synthase [Helicobacter pullorum MIT 98-5489] Length = 648 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 26/57 (45%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + +K K YY LDDP+ +D YD + ++ + + P +D P VG Sbjct: 5 QYLQAIKTLNLWAKHYYILDDPIASDEEYDTLYHQIKEFEAKNPNQIAKDSPTQRVG 61 >gi|85057601|ref|YP_456517.1| NAD-dependent DNA ligase [Aster yellows witches'-broom phytoplasma AYWB] gi|123725342|sp|Q2NJF5|DNLJ_AYWBP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|84789706|gb|ABC65438.1| NAD-dependent DNA ligase [Aster yellows witches'-broom phytoplasma AYWB] Length = 671 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ LVK YY L DP +D YD + + L L+ +P+ P +G Sbjct: 7 IKQKIKSLVKQLNKANYQYYNLSDPDLSDQQYDALIKELINLENHYPQFKLPYSPTLKIG 66 >gi|255283571|ref|ZP_05348126.1| DNA ligase, NAD-dependent [Bryantella formatexigens DSM 14469] gi|255265833|gb|EET59038.1| DNA ligase, NAD-dependent [Bryantella formatexigens DSM 14469] Length = 667 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + ++ L++ H+ YY L+ P TD YDR+ + L AL+++ + P T Sbjct: 2 EQKITRMKQLIQNLNKHRNAYYNLNAPTITDQEYDRLYDELAALEKE-TGVILSYSPTQT 60 Query: 117 VGY 119 VGY Sbjct: 61 VGY 63 >gi|320533083|ref|ZP_08033816.1| DNA ligase, NAD-dependent [Actinomyces sp. oral taxon 171 str. F0337] gi|320134698|gb|EFW26913.1| DNA ligase, NAD-dependent [Actinomyces sp. oral taxon 171 str. F0337] Length = 825 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 3/86 (3%) Query: 36 PNKRALESWLDKAKKVT-SLSKGEAMIEVEYLVKIALHHQKWYY-RLDDPL-FTDGLYDR 92 P + + D+ V S+ A LV+ + YY +D +D YD Sbjct: 12 PTPASSSARSDRQSPVDLSVVPAAARERWSELVRDIEAARDAYYNAIDAESPLSDADYDA 71 Query: 93 VSERLDALQEQFPELFDEDHPWNTVG 118 + L+ L+ P L P +VG Sbjct: 72 LYRELEGLEAAHPLLARAGSPTRSVG 97 >gi|312149444|gb|ADQ29515.1| DNA ligase, NAD-dependent [Borrelia burgdorferi N40] Length = 660 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ L K+ K YY P D +YD+ RL L+ ++PE D P Sbjct: 3 SKVQQEIADLKKLIRKWDKEYYVDSLPSVEDFVYDKHILRLQELESKYPEYKTLDSPTLK 62 Query: 117 VG 118 G Sbjct: 63 FG 64 >gi|224533503|ref|ZP_03674092.1| DNA ligase, NAD-dependent [Borrelia burgdorferi CA-11.2a] gi|224513176|gb|EEF83538.1| DNA ligase, NAD-dependent [Borrelia burgdorferi CA-11.2a] Length = 660 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ L K+ K YY P D +YD+ RL L+ ++PE D P Sbjct: 3 SKVQQEIADLKKLIRKWDKEYYVDSLPSVEDFVYDKHILRLQELESKYPEYKTLDSPTLK 62 Query: 117 VG 118 G Sbjct: 63 FG 64 >gi|224532693|ref|ZP_03673310.1| DNA ligase, NAD-dependent [Borrelia burgdorferi WI91-23] gi|224512311|gb|EEF82695.1| DNA ligase, NAD-dependent [Borrelia burgdorferi WI91-23] Length = 660 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ L K+ K YY P D +YD+ RL L+ ++PE D P Sbjct: 3 SKVQQEIADLKKLIRKWDKEYYVDSLPSVEDFVYDKHILRLQELESKYPEYKTLDSPTLK 62 Query: 117 VG 118 G Sbjct: 63 FG 64 >gi|221218112|ref|ZP_03589578.1| DNA ligase, NAD-dependent [Borrelia burgdorferi 72a] gi|221192060|gb|EEE18281.1| DNA ligase, NAD-dependent [Borrelia burgdorferi 72a] Length = 660 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ L K+ K YY P D +YD+ RL L+ ++PE D P Sbjct: 3 SKVQQEIADLKKLIRKWDKEYYVDSLPSVEDFVYDKHILRLQELESKYPEYKTLDSPTLK 62 Query: 117 VG 118 G Sbjct: 63 FG 64 >gi|195941686|ref|ZP_03087068.1| DNA ligase (lig) [Borrelia burgdorferi 80a] gi|225549484|ref|ZP_03770450.1| DNA ligase, NAD-dependent [Borrelia burgdorferi 118a] gi|225369761|gb|EEG99208.1| DNA ligase, NAD-dependent [Borrelia burgdorferi 118a] Length = 660 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ L K+ K YY P D +YD+ RL L+ ++PE D P Sbjct: 3 SKVQQEIADLKKLIRKWDKEYYVDSLPSVEDFVYDKHILRLQELESKYPEYKTLDSPTLK 62 Query: 117 VG 118 G Sbjct: 63 FG 64 >gi|226321858|ref|ZP_03797384.1| DNA ligase, NAD-dependent [Borrelia burgdorferi Bol26] gi|226233047|gb|EEH31800.1| DNA ligase, NAD-dependent [Borrelia burgdorferi Bol26] Length = 660 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ L K+ K YY P D +YD+ RL L+ ++PE D P Sbjct: 3 SKVQQEIADLKKLIRKWDKEYYVDSLPSVEDFVYDKHILRLQELESKYPEYKTLDSPTLK 62 Query: 117 VG 118 G Sbjct: 63 FG 64 >gi|218249478|ref|YP_002375058.1| DNA ligase, NAD-dependent [Borrelia burgdorferi ZS7] gi|254781261|sp|B7J2B3|DNLJ_BORBZ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218164666|gb|ACK74727.1| DNA ligase, NAD-dependent [Borrelia burgdorferi ZS7] Length = 660 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ L K+ K YY P D +YD+ RL L+ ++PE D P Sbjct: 3 SKVQQEIADLKKLIRKWDKEYYVDSLPSVEDFVYDKHILRLQELESKYPEYKTLDSPTLK 62 Query: 117 VG 118 G Sbjct: 63 FG 64 >gi|216264759|ref|ZP_03436751.1| DNA ligase, NAD-dependent [Borrelia burgdorferi 156a] gi|223888694|ref|ZP_03623285.1| DNA ligase, NAD-dependent [Borrelia burgdorferi 64b] gi|225548725|ref|ZP_03769772.1| DNA ligase, NAD-dependent [Borrelia burgdorferi 94a] gi|215981232|gb|EEC22039.1| DNA ligase, NAD-dependent [Borrelia burgdorferi 156a] gi|223885510|gb|EEF56609.1| DNA ligase, NAD-dependent [Borrelia burgdorferi 64b] gi|225370755|gb|EEH00191.1| DNA ligase, NAD-dependent [Borrelia burgdorferi 94a] Length = 660 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ L K+ K YY P D +YD+ RL L+ ++PE D P Sbjct: 3 SKVQQEIADLKKLIRKWDKEYYVDSLPSVEDFVYDKHILRLQELESKYPEYKTLDSPTLK 62 Query: 117 VG 118 G Sbjct: 63 FG 64 >gi|15594897|ref|NP_212686.1| NAD-dependent DNA ligase LigA [Borrelia burgdorferi B31] gi|7673988|sp|O51502|DNLJ_BORBU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|2688477|gb|AAC66923.1| DNA ligase (lig) [Borrelia burgdorferi B31] Length = 660 Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ L K+ K YY P D +YD+ RL L+ ++PE D P Sbjct: 3 SKVQQEIADLKKLIRKWDKEYYVDSLPSVEDFVYDKHILRLQELESKYPEYKTLDSPTLK 62 Query: 117 VG 118 G Sbjct: 63 FG 64 >gi|225552370|ref|ZP_03773310.1| DNA ligase, NAD-dependent [Borrelia sp. SV1] gi|225371368|gb|EEH00798.1| DNA ligase, NAD-dependent [Borrelia sp. SV1] Length = 660 Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ L K+ K YY P D +YD+ RL L+ ++PE D P Sbjct: 3 SKVQQEIADLKKLIRKWDKEYYVDSLPSVEDFVYDKHILRLQELENKYPEYKTLDSPTLK 62 Query: 117 VG 118 G Sbjct: 63 FG 64 >gi|259416760|ref|ZP_05740680.1| DNA ligase, NAD-dependent [Silicibacter sp. TrichCH4B] gi|259348199|gb|EEW59976.1| DNA ligase, NAD-dependent [Silicibacter sp. TrichCH4B] Length = 739 Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ +A E E L Y++ D P +D YDR+ R AL E FPEL +E Sbjct: 1 MNVTDARKEFEALQTKIEAADLDYHQKDAPTLSDAEYDRLKRRYLALAEAFPELAEEGTR 60 Query: 114 WNTVG 118 +VG Sbjct: 61 VESVG 65 >gi|308235729|ref|ZP_07666466.1| DNA ligase (NAD(+)) [Gardnerella vaginalis ATCC 14018] gi|311114720|ref|YP_003985941.1| NAD-dependent DNA ligase LigA [Gardnerella vaginalis ATCC 14019] gi|310946214|gb|ADP38918.1| NAD-dependent DNA ligase LigA [Gardnerella vaginalis ATCC 14019] Length = 960 Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 26/65 (40%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+ +A L A Q YY D P +D YD L +L+ FP L P Sbjct: 99 LTSEQAARLWAKLAAWAQSDQIAYYVDDSPSSSDAAYDTRMRVLSSLESTFPILDTPQSP 158 Query: 114 WNTVG 118 + VG Sbjct: 159 THRVG 163 >gi|315452902|ref|YP_004073172.1| DNA ligase [Helicobacter felis ATCC 49179] gi|315131954|emb|CBY82582.1| DNA ligase [Helicobacter felis ATCC 49179] Length = 733 Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 71 LHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 HH YY LDDPL +D YD + +++ + PE E P VG Sbjct: 19 AHH---YYVLDDPLVSDFEYDTLYQQIQDYEHAHPEQILEHSPTQRVG 63 >gi|15894478|ref|NP_347827.1| NAD-dependent DNA ligase LigA [Clostridium acetobutylicum ATCC 824] gi|81530636|sp|Q97JS8|DNLJ1_CLOAB RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 1 gi|15024117|gb|AAK79167.1|AE007633_11 DNA ligase (NAD dependent), LigA [Clostridium acetobutylicum ATCC 824] gi|325508609|gb|ADZ20245.1| NAD-dependent DNA ligase LigA [Clostridium acetobutylicum EA 2018] Length = 663 Score = 70.7 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L++ + YY LD+P+ D YD + + L L+E+ E + + P VG Sbjct: 4 IEDLIEKLNKYSYSYYVLDNPIVADKEYDIMYDELKRLEEE-TEYINPNSPTQRVG 58 >gi|62185205|ref|YP_219990.1| NAD-dependent DNA ligase LigA [Chlamydophila abortus S26/3] gi|81312632|sp|Q5L5Q2|DNLJ_CHLAB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|62148272|emb|CAH64037.1| putative DNA ligase [Chlamydophila abortus S26/3] Length = 660 Score = 70.7 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 25/65 (38%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + + L K YY L +P +D YD +L +++ Q PE P Sbjct: 1 MQSTYSREQYISLCKDIEEDDYRYYVLHNPTISDYDYDMKMRQLLSIEAQHPEWKVLWSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 SMRLG 65 >gi|149195296|ref|ZP_01872384.1| NAD-dependent DNA ligase LigA [Caminibacter mediatlanticus TB-2] gi|149134560|gb|EDM23048.1| NAD-dependent DNA ligase LigA [Caminibacter mediatlanticus TB-2] Length = 682 Score = 70.7 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 30/58 (51%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E + V+ +YY LD+PL TD YD++ + ++ ++ P+ D+ P +G Sbjct: 6 EEYKKAVETLKKWAYYYYVLDNPLVTDEEYDKLYKEVEEYEKNHPDEVDKTSPTQRIG 63 >gi|312147884|gb|ADQ30543.1| DNA ligase, NAD-dependent [Borrelia burgdorferi JD1] Length = 660 Score = 70.3 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L K+ K YY P D +YD+ RL L+ ++PE D P G Sbjct: 5 VQQEIADLKKLIRKWDKEYYVDSLPSVEDFVYDKHILRLQELESKYPEYKTLDSPTLKFG 64 >gi|226320519|ref|ZP_03796084.1| DNA ligase, NAD-dependent [Borrelia burgdorferi 29805] gi|226234083|gb|EEH32799.1| DNA ligase, NAD-dependent [Borrelia burgdorferi 29805] Length = 660 Score = 70.3 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L K+ K YY P D +YD+ RL L+ ++PE D P G Sbjct: 5 VQQEIADLKKLIRKWDKEYYVDSLPSVEDFVYDKHILRLQELESKYPEYKTLDSPTLKFG 64 >gi|237785838|ref|YP_002906543.1| NAD-dependent DNA ligase LigA [Corynebacterium kroppenstedtii DSM 44385] gi|237758750|gb|ACR18000.1| DNA ligase [Corynebacterium kroppenstedtii DSM 44385] Length = 686 Score = 70.3 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L HH+ YY +P+ +D +D + + L L+ PEL P VG Sbjct: 6 QAQWNSLAADVRHHRDLYY-NSEPVISDAEFDHLFKTLQDLEADHPELAKNGSPTEEVG 63 >gi|297583057|ref|YP_003698837.1| DNA ligase [Bacillus selenitireducens MLS10] gi|297141514|gb|ADH98271.1| DNA ligase, NAD-dependent [Bacillus selenitireducens MLS10] Length = 668 Score = 70.3 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 54 LSKGE-AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +S+ + ++ L + + YY LD P D YDR+ + L+ L+ PEL D Sbjct: 1 MSENQDVQKRIDTLTETVNDYAHHYYVLDQPKVPDAEYDRLLQELEELEAAHPELKRSDS 60 Query: 113 PWNTVG 118 P VG Sbjct: 61 PSERVG 66 >gi|219684330|ref|ZP_03539274.1| DNA ligase, NAD-dependent [Borrelia garinii PBr] gi|219672319|gb|EED29372.1| DNA ligase, NAD-dependent [Borrelia garinii PBr] Length = 660 Score = 70.3 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 24/61 (39%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + E+E L K+ K YY P D +YD RL L+ PE D P Sbjct: 4 KIQQEIEDLKKLIRKWDKEYYVDSLPSVEDFVYDNHILRLKELESTHPEYKTLDSPTLKF 63 Query: 118 G 118 G Sbjct: 64 G 64 >gi|303281478|ref|XP_003060031.1| predicted protein [Micromonas pusilla CCMP1545] gi|226458686|gb|EEH55983.1| predicted protein [Micromonas pusilla CCMP1545] Length = 887 Score = 70.3 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 30/67 (44%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++L E + L + + Y+ DP+ +D YD RL+AL+ P + ED Sbjct: 75 SALPASEVPAAMASLAEFISRADEAYHNDADPVASDAAYDATRLRLEALEALHPAMIRED 134 Query: 112 HPWNTVG 118 P VG Sbjct: 135 SPIGAVG 141 >gi|268679995|ref|YP_003304426.1| DNA ligase, NAD-dependent [Sulfurospirillum deleyianum DSM 6946] gi|268618026|gb|ACZ12391.1| DNA ligase, NAD-dependent [Sulfurospirillum deleyianum DSM 6946] Length = 648 Score = 70.3 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E ++I K YY D P+ +D YDR+ + A +++ P DE P VG Sbjct: 4 QEYSEKIEILKAWAKAYYVDDAPIASDEEYDRLYHEILAFEKENPLFADESSPTKRVG 61 >gi|203287992|ref|YP_002223007.1| DNA ligase [Borrelia recurrentis A1] gi|254781265|sp|B5RPQ2|DNLJ_BORRA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|201085212|gb|ACH94786.1| DNA ligase [Borrelia recurrentis A1] Length = 669 Score = 70.3 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 23/62 (37%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ L + YY P D YD+ RL L+ ++PE D P Sbjct: 3 KDIKDEILSLRDAIKKWDREYYVDSSPTVGDVTYDKALLRLQYLENRYPEYKTLDSPTLK 62 Query: 117 VG 118 G Sbjct: 63 FG 64 >gi|203284458|ref|YP_002222198.1| DNA ligase [Borrelia duttonii Ly] gi|254781262|sp|B5RMA6|DNLJ_BORDL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|201083901|gb|ACH93492.1| DNA ligase [Borrelia duttonii Ly] Length = 669 Score = 70.3 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 23/62 (37%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ L + YY P D YD+ RL L+ ++PE D P Sbjct: 3 KDIKDEILSLRDAIKKWDREYYVDSSPTVGDVTYDKALLRLQYLENRYPEYKTLDSPTLK 62 Query: 117 VG 118 G Sbjct: 63 FG 64 >gi|224534829|ref|ZP_03675401.1| DNA ligase, NAD-dependent [Borrelia spielmanii A14S] gi|224514077|gb|EEF84399.1| DNA ligase, NAD-dependent [Borrelia spielmanii A14S] Length = 660 Score = 70.3 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 25/62 (40%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ L K+ K YY P D +YD RL L+ ++PE D P Sbjct: 3 SKIQQEIANLKKLIRKWDKEYYVDSLPSVEDFVYDEHILRLQELESKYPEYKTLDSPTLK 62 Query: 117 VG 118 G Sbjct: 63 FG 64 >gi|224531714|ref|ZP_03672346.1| DNA ligase, NAD-dependent [Borrelia valaisiana VS116] gi|224511179|gb|EEF81585.1| DNA ligase, NAD-dependent [Borrelia valaisiana VS116] Length = 660 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ L K+ K YY P D +YD+ RL L+ ++PE D P Sbjct: 3 SKVQQEIADLKKLIRKWDKEYYVDSLPSVEDFIYDKHILRLQELESKYPEYKTLDSPTLK 62 Query: 117 VG 118 G Sbjct: 63 FG 64 >gi|322382981|ref|ZP_08056811.1| NAD-dependent DNA ligase LigA-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153004|gb|EFX45464.1| NAD-dependent DNA ligase LigA-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 673 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L++ H YY LD+P TD YD + +RL L+++ + P VG Sbjct: 8 MKILIEEINKHNYHYYTLDEPTITDQEYDALYDRLLKLEKE-SGTVLPNSPTLRVG 62 >gi|257467825|ref|ZP_05631921.1| NAD-dependent DNA ligase [Fusobacterium ulcerans ATCC 49185] Length = 688 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L L + ++YY ++ L +D YD + L L+E++PE E P VG Sbjct: 18 KERIEKLRADLLKYNQYYYTNNESLISDVEYDMLMNELKELEEKYPEYKSEASPTVIVG 76 >gi|227498227|ref|ZP_03928396.1| DNA ligase (NAD(+)) [Actinomyces urogenitalis DSM 15434] gi|226832370|gb|EEH64753.1| DNA ligase (NAD(+)) [Actinomyces urogenitalis DSM 15434] Length = 827 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 6/75 (8%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYY-RLDD-PLFTDGLYDRVSERLDALQEQ 103 D A+ V EA E L ++ + YY LD +D YD + L+ L+ Sbjct: 21 DDAEAVPQ----EARRRWEELAELVERARAAYYDALDAESTTSDAAYDALYRELEDLEAA 76 Query: 104 FPELFDEDHPWNTVG 118 +P+L P +VG Sbjct: 77 WPQLRVPHSPTRSVG 91 >gi|308182775|ref|YP_003926902.1| NAD-dependent DNA ligase LigA [Helicobacter pylori PeCan4] gi|308064960|gb|ADO06852.1| NAD-dependent DNA ligase LigA [Helicobacter pylori PeCan4] Length = 656 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL HH YY LD+ + +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYL-NTLSHH---YYNLDESIVSDAVYDELYQELKAYEEKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|119953337|ref|YP_945546.1| NAD-dependent DNA ligase LigA [Borrelia turicatae 91E135] gi|254781266|sp|A1QZY4|DNLJ_BORT9 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|119862108|gb|AAX17876.1| NAD-dependent DNA ligase [Borrelia turicatae 91E135] Length = 676 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 24/62 (38%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ L K YY P +D YD+ RL L+ ++PE D P Sbjct: 11 KDIEDEILCLRDNIRKWNKEYYVDSSPSVSDLTYDKALLRLQDLESKYPEYKTLDSPTLK 70 Query: 117 VG 118 G Sbjct: 71 FG 72 >gi|284931737|gb|ADC31675.1| DNA ligase [Mycoplasma gallisepticum str. F] Length = 715 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 56 KGEAMIEV-EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 K E++ E+ E LVK + YY L +P +D +YD L + ++P+ P Sbjct: 5 KNESIKEIIEDLVKKLTKWEHEYYVLSNPSVSDEVYDNTYRTLLGYERKYPQYVLSYSPT 64 Query: 115 NTVG 118 VG Sbjct: 65 QRVG 68 >gi|294660617|ref|NP_853482.2| DNA ligase [Mycoplasma gallisepticum str. R(low)] gi|298286803|sp|Q7NAF8|DNLJ_MYCGA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|284812280|gb|AAP57050.2| DNA ligase [Mycoplasma gallisepticum str. R(low)] gi|284930979|gb|ADC30918.1| DNA ligase [Mycoplasma gallisepticum str. R(high)] Length = 715 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 56 KGEAMIEV-EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 K E++ E+ E LVK + YY L +P +D +YD L + ++P+ P Sbjct: 5 KNESIKEIIEDLVKKLTKWEHEYYVLSNPSVSDEVYDNTYRTLLGYERKYPQYVLSYSPT 64 Query: 115 NTVG 118 VG Sbjct: 65 QRVG 68 >gi|269219963|ref|ZP_06163817.1| DNA ligase, NAD-dependent [Actinomyces sp. oral taxon 848 str. F0332] gi|269210599|gb|EEZ76939.1| DNA ligase, NAD-dependent [Actinomyces sp. oral taxon 848 str. F0332] Length = 799 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 32/64 (50%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + G+A + + Q+ Y+ D+P+ TD YDR+ L L+ + PEL + P Sbjct: 10 NFGDARERWNEIAPLVSSAQRAYHSGDEPIVTDEHYDRLVRELRRLEAEHPELAVDSSPA 69 Query: 115 NTVG 118 +VG Sbjct: 70 QSVG 73 >gi|310830411|ref|YP_003965512.1| DNA ligase, NAD-dependent [Paenibacillus polymyxa SC2] gi|309249878|gb|ADO59444.1| DNA ligase, NAD-dependent [Paenibacillus polymyxa SC2] Length = 662 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 A ++ L H + Y + P+ +D Y+ + L L++Q+PE D P + + Sbjct: 7 AQQRIKQLTSEIRKHDELYDQF-KPVISDQEYNNLYYELLDLEKQYPEFVIPDSPTHKI 64 >gi|307637302|gb|ADN79752.1| NAD-dependent DNA ligase [Helicobacter pylori 908] gi|325995893|gb|ADZ51298.1| DNA ligase [Helicobacter pylori 2018] gi|325997488|gb|ADZ49696.1| NAD-dependent DNA ligase [Helicobacter pylori 2017] Length = 656 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL HH YY LD+ + +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYL-NTLSHH---YYNLDESIVSDAVYDELYQELKAYEEENPNHIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|308184399|ref|YP_003928532.1| NAD-dependent DNA ligase LigA [Helicobacter pylori SJM180] gi|308060319|gb|ADO02215.1| NAD-dependent DNA ligase LigA [Helicobacter pylori SJM180] Length = 656 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL HH YY LD+ + +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYL-NTLSHH---YYNLDESIVSDAVYDELYQELKAYEEENPNRIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|237804493|ref|YP_002888647.1| NAD-dependent DNA ligase LigA [Chlamydia trachomatis B/TZ1A828/OT] gi|231272793|emb|CAX09699.1| NAD-dependent DNA ligase [Chlamydia trachomatis B/TZ1A828/OT] Length = 663 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + H + YY L+ P +D YD L ++ Q PE P +G Sbjct: 12 LCAELVEHDRRYYVLNQPTISDYSYDVKMRELQEIEVQHPEWKVSWSPTMYLG 64 >gi|167461915|ref|ZP_02327004.1| NAD-dependent DNA ligase LigA [Paenibacillus larvae subsp. larvae BRL-230010] Length = 363 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L++ H YY LD+P TD YD + +RL L+++ + P VG Sbjct: 8 MKILIEEINKHNYHYYTLDEPTITDQEYDALYDRLLKLEKE-SGTVLPNSPTLRVG 62 >gi|99081239|ref|YP_613393.1| DNA ligase, NAD-dependent [Ruegeria sp. TM1040] gi|122984289|sp|Q1GGT5|DNLJ_SILST RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|99037519|gb|ABF64131.1| DNA ligase NAD-dependent [Ruegeria sp. TM1040] Length = 739 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 29/65 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +A E E L Y++ D P +D YDR+ R AL + FP L + Sbjct: 1 MDEADARAEFEALQTKIEKADHDYHQKDAPTLSDADYDRLKRRYLALADAFPILAKDGTR 60 Query: 114 WNTVG 118 +VG Sbjct: 61 VASVG 65 >gi|239928777|ref|ZP_04685730.1| NAD-dependent DNA ligase LigA [Streptomyces ghanaensis ATCC 14672] gi|291437098|ref|ZP_06576488.1| NAD-dependent DNA ligase LigA [Streptomyces ghanaensis ATCC 14672] gi|291339993|gb|EFE66949.1| NAD-dependent DNA ligase LigA [Streptomyces ghanaensis ATCC 14672] Length = 731 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 32/62 (51%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 EA + L + H+ YY D P+ +D +DR+ L+AL+E++PEL D P Sbjct: 13 PAEAREQHVQLAEQIEEHRFRYYVNDAPVISDAEFDRLLRELEALEEEYPELRTPDSPTQ 72 Query: 116 TV 117 V Sbjct: 73 KV 74 >gi|163741160|ref|ZP_02148552.1| DNA ligase, NAD-dependent [Phaeobacter gallaeciensis 2.10] gi|161385513|gb|EDQ09890.1| DNA ligase, NAD-dependent [Phaeobacter gallaeciensis 2.10] Length = 741 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 26/65 (40%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ EA L Y++ DDP +D YD AL E FPEL D Sbjct: 1 MTSDEARARFLLLQDELRVADLAYHQADDPEISDADYDAKKREYRALAEHFPELADGATA 60 Query: 114 WNTVG 118 TVG Sbjct: 61 LETVG 65 >gi|315649754|ref|ZP_07902837.1| NAD-dependent DNA ligase LigA [Paenibacillus vortex V453] gi|315274728|gb|EFU38109.1| NAD-dependent DNA ligase LigA [Paenibacillus vortex V453] Length = 670 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L+ ++ YY LD PL +D YD + ++L AL+ + + D P VG Sbjct: 4 KEKMGKLITELNNYNYHYYTLDQPLVSDKEYDALYDQLVALEAE-TGVTLPDSPTQRVG 61 >gi|284929444|ref|YP_003421966.1| DNA ligase, NAD-dependent [cyanobacterium UCYN-A] gi|284809888|gb|ADB95585.1| DNA ligase, NAD-dependent [cyanobacterium UCYN-A] Length = 682 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 28/65 (43%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + L K Y+ L++ + D +YD++ +L L+++ P L D Sbjct: 1 MNNLNIQKTIIKLRKHLQQANYAYHVLNESIMEDSVYDQLYRQLYNLEQRNPNLISSDSV 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQRVG 65 >gi|329942957|ref|ZP_08291736.1| DNA ligase, NAD-dependent [Chlamydophila psittaci Cal10] gi|313848123|emb|CBY17124.1| putative DNA ligase [Chlamydophila psittaci RD1] gi|325506604|gb|ADZ18242.1| NAD-dependent DNA ligase [Chlamydophila psittaci 6BC] gi|328815217|gb|EGF85206.1| DNA ligase, NAD-dependent [Chlamydophila psittaci Cal10] gi|328914798|gb|AEB55631.1| DNA ligase, NAD-dependent [Chlamydophila psittaci 6BC] Length = 660 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 25/65 (38%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + + L K YY L +P +D YD +L +++ Q PE P Sbjct: 1 MQSTYSREQYLSLCKDIEEDDYRYYVLHNPTISDYDYDMKMRQLLSIEAQHPEWKVLWSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 SMRLG 65 >gi|210134818|ref|YP_002301257.1| NAD-dependent DNA ligase LigA [Helicobacter pylori P12] gi|254781345|sp|B6JLJ9|DNLJ_HELP2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|210132786|gb|ACJ07777.1| DNA ligase [Helicobacter pylori P12] Length = 656 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL HH YY LD+ + +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIEYL-NTLSHH---YYNLDESIVSDAVYDELYQELKAYEEKNPNDIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|71894578|ref|YP_278686.1| DNA ligase [Mycoplasma synoviae 53] gi|123734274|sp|Q4A5J6|DNLJ_MYCS5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|71851366|gb|AAZ43975.1| DNA ligase [Mycoplasma synoviae 53] Length = 697 Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 27/65 (41%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S + ++ L H YY LD P D YD + L L+ ++P L ED Sbjct: 1 MSNQQIKEKIISLNNYLKHLNHLYYDLDAPEVDDKTYDSLYNELLELEAKYPSLVLEDSV 60 Query: 114 WNTVG 118 +G Sbjct: 61 TKIIG 65 >gi|237802575|ref|YP_002887769.1| NAD-dependent DNA ligase LigA [Chlamydia trachomatis B/Jali20/OT] gi|231273809|emb|CAX10593.1| NAD-dependent DNA ligase [Chlamydia trachomatis B/Jali20/OT] Length = 663 Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + H + YY L+ P +D YD L ++ Q PE P +G Sbjct: 12 LCTELVEHDRRYYVLNQPTISDYSYDVKMRELQEIEVQHPEWKVSWSPTMYLG 64 >gi|15604865|ref|NP_219649.1| NAD-dependent DNA ligase LigA [Chlamydia trachomatis D/UW-3/CX] gi|7673995|sp|O84148|DNLJ_CHLTR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|3328547|gb|AAC67737.1| DNA Ligase [Chlamydia trachomatis D/UW-3/CX] gi|289525187|emb|CBJ14662.1| NAD-dependent DNA ligase [Chlamydia trachomatis Sweden2] gi|297748276|gb|ADI50822.1| NAD-dependent DNA ligase [Chlamydia trachomatis D-EC] gi|297749156|gb|ADI51834.1| NAD-dependent DNA ligase [Chlamydia trachomatis D-LC] Length = 663 Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + H + YY L+ P +D YD L ++ Q PE P +G Sbjct: 12 LCTELVEHDRRYYVLNQPTISDYSYDVKMRELQEIEVQHPEWKVSWSPTMYLG 64 >gi|221195651|ref|ZP_03568705.1| DNA ligase, NAD-dependent [Atopobium rimae ATCC 49626] gi|221184417|gb|EEE16810.1| DNA ligase, NAD-dependent [Atopobium rimae ATCC 49626] Length = 706 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 2/67 (2%) Query: 54 LSKGE--AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 +S+ E L +I H YY LD P TD +DR+ L ++ PEL + Sbjct: 1 MSEAEKSFRSRAAELNRILNHAAYAYYALDAPELTDAEFDRLLVELQGIEAAHPELIVPE 60 Query: 112 HPWNTVG 118 VG Sbjct: 61 SYTQRVG 67 >gi|255310946|ref|ZP_05353516.1| NAD-dependent DNA ligase LigA [Chlamydia trachomatis 6276] gi|255317247|ref|ZP_05358493.1| NAD-dependent DNA ligase LigA [Chlamydia trachomatis 6276s] gi|296435662|gb|ADH17836.1| NAD-dependent DNA ligase LigA [Chlamydia trachomatis G/9768] gi|296436585|gb|ADH18755.1| NAD-dependent DNA ligase LigA [Chlamydia trachomatis G/11222] gi|296437522|gb|ADH19683.1| NAD-dependent DNA ligase LigA [Chlamydia trachomatis G/11074] gi|297140021|gb|ADH96779.1| NAD-dependent DNA ligase LigA [Chlamydia trachomatis G/9301] Length = 663 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + H + YY L+ P +D YD L ++ Q PE P +G Sbjct: 12 LCTELVEHDRRYYVLNQPTISDYSYDVKMRELQEIEVQHPEWKVSWSPTMYLG 64 >gi|15618073|ref|NP_224357.1| NAD-dependent DNA ligase LigA [Chlamydophila pneumoniae CWL029] gi|15835684|ref|NP_300208.1| NAD-dependent DNA ligase LigA [Chlamydophila pneumoniae J138] gi|16752895|ref|NP_445166.1| NAD-dependent DNA ligase LigA [Chlamydophila pneumoniae AR39] gi|33241485|ref|NP_876426.1| NAD-dependent DNA ligase LigA [Chlamydophila pneumoniae TW-183] gi|7674003|sp|Q9Z934|DNLJ_CHLPN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|4376415|gb|AAD18302.1| DNA Ligase [Chlamydophila pneumoniae CWL029] gi|7189537|gb|AAF38439.1| DNA ligase [Chlamydophila pneumoniae AR39] gi|8978522|dbj|BAA98359.1| DNA ligase [Chlamydophila pneumoniae J138] gi|33235993|gb|AAP98083.1| DNA ligase (NAD+) [Chlamydophila pneumoniae TW-183] Length = 662 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 23/65 (35%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + + L + H YY L P +D YD +L ++ PE P Sbjct: 1 MKEENSQAHYLALCRELEDHDYSYYVLHRPRISDYEYDMKLRKLLEIERSHPEWKVLWSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 STRLG 65 >gi|269303032|gb|ACZ33132.1| DNA ligase, NAD-dependent [Chlamydophila pneumoniae LPCoLN] Length = 662 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 23/65 (35%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + + L + H YY L P +D YD +L ++ PE P Sbjct: 1 MKEENSQAHYLALCRELEDHDYSYYVLHRPRISDYEYDMKLRKLLEIERSHPEWKVLWSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 STRLG 65 >gi|253583310|ref|ZP_04860508.1| DNA ligase [Fusobacterium varium ATCC 27725] gi|251833882|gb|EES62445.1| DNA ligase [Fusobacterium varium ATCC 27725] Length = 688 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L L + ++YY ++ L +D YD + L L+E++PE E P VG Sbjct: 18 KERIEKLRADLLKYNQYYYTNNESLISDVEYDMLMNELKDLEEKYPEYKSEASPTVIVG 76 >gi|188527537|ref|YP_001910224.1| NAD-dependent DNA ligase LigA [Helicobacter pylori Shi470] gi|254781347|sp|B2UTL2|DNLJ_HELPS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|188143777|gb|ACD48194.1| NAD-dependent DNA ligase LigA [Helicobacter pylori Shi470] Length = 656 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + +EYL HH YY LDD + +D +YD + + L A + + P + P Sbjct: 4 SQKEYLERIEYL-NTLSHH---YYNLDDSIVSDAVYDELYQELKAYEGKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|308233598|ref|ZP_07664335.1| DNA ligase, NAD-dependent [Atopobium vaginae DSM 15829] gi|328944216|ref|ZP_08241680.1| DNA ligase [Atopobium vaginae DSM 15829] gi|327491135|gb|EGF22910.1| DNA ligase [Atopobium vaginae DSM 15829] Length = 792 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 29/59 (49%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 V L K+ +H YY LD PL TD +D + L L++ +P L DE + +G Sbjct: 84 EARVRELRKLLEYHAYRYYALDAPLITDNQFDSYLQELLHLEKTYPYLDDEHSYTHRIG 142 >gi|172040410|ref|YP_001800124.1| NAD-dependent DNA ligase LigA [Corynebacterium urealyticum DSM 7109] gi|254781300|sp|B1VG01|DNLJ_CORU7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|171851714|emb|CAQ04690.1| DNA ligase [Corynebacterium urealyticum DSM 7109] Length = 712 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 1/61 (1%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E + + L HH++ YY +P +D +D + RL + PE P Sbjct: 24 AELAQQWQSLADQVRHHREVYY-YGNPEISDAEFDALLTRLQEFENSHPEAVTGPSPTTE 82 Query: 117 V 117 V Sbjct: 83 V 83 >gi|328957928|ref|YP_004375314.1| NAD-dependent DNA ligase LigA [Carnobacterium sp. 17-4] gi|328674252|gb|AEB30298.1| NAD-dependent DNA ligase LigA [Carnobacterium sp. 17-4] Length = 645 Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 20/39 (51%) Query: 80 LDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 D P D YD++ L AL+E FP+L D P +G Sbjct: 2 KDAPSIPDTDYDKLYNELVALEEAFPDLISNDSPTQRIG 40 >gi|325479535|gb|EGC82631.1| DNA ligase (NAD+) [Anaerococcus prevotii ACS-065-V-Col13] Length = 669 Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + E+ L++ YY LD+PL +DG YD + +RL L+++ +E+ P V Sbjct: 2 DIREEINQLIEEINRLNYHYYTLDEPLVSDGEYDEIYDRLVKLEDK-SGYINENSPTQKV 60 Query: 118 G 118 G Sbjct: 61 G 61 >gi|158319601|ref|YP_001512108.1| NAD-dependent DNA ligase LigA [Alkaliphilus oremlandii OhILAs] gi|190359226|sp|A8MLJ8|DNLJ_ALKOO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|158139800|gb|ABW18112.1| DNA ligase, NAD-dependent [Alkaliphilus oremlandii OhILAs] Length = 661 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 5/62 (8%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL--FDEDHPWNT 116 +M + LV I + YY LD+P+ +D YD++ + L L++ EL ED P Sbjct: 3 SMERLRQLVDILNEYSYQYYVLDEPVVSDKEYDQLYDELVLLEK---ELNTVLEDSPTIR 59 Query: 117 VG 118 VG Sbjct: 60 VG 61 >gi|227548037|ref|ZP_03978086.1| DNA ligase (NAD(+)) [Corynebacterium lipophiloflavum DSM 44291] gi|227079891|gb|EEI17854.1| DNA ligase (NAD(+)) [Corynebacterium lipophiloflavum DSM 44291] Length = 689 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + + L HH+ YY + +D +D++ L A +E PEL + P VG Sbjct: 27 RQWDDLASQVRHHRDLYYNGQQ-VISDAEFDKLFNNLVAFEEAHPELAVPESPTKEVG 83 >gi|207109554|ref|ZP_03243716.1| NAD-dependent DNA ligase LigA [Helicobacter pylori HPKX_438_CA4C1] Length = 87 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + + YL HH YY LDDP+ +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIAYL-NTLSHH---YYNLDDPIVSDAVYDELYQELKAYEEKNPNSIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|89898194|ref|YP_515304.1| NAD-dependent DNA ligase LigA [Chlamydophila felis Fe/C-56] gi|123735917|sp|Q254X9|DNLJ_CHLFF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|89331566|dbj|BAE81159.1| DNA ligase [Chlamydophila felis Fe/C-56] Length = 662 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 25/59 (42%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L K YY L DP+ +D YD ++L +++ Q PE P +G Sbjct: 7 REQYLALCKDIEEDDYRYYVLHDPIISDYDYDMKMQKLLSIEAQHPEWRVLWSPSMRLG 65 >gi|254779395|ref|YP_003057500.1| NAD-dependent DNA ligase LigA [Helicobacter pylori B38] gi|254001306|emb|CAX29287.1| DNA ligase (NAD(+)) [Helicobacter pylori B38] Length = 656 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + + YL HH YY LD+ + +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIAYL-NTLSHH---YYNLDESIVSDAVYDELYQELKAYEEENPNDIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|315638276|ref|ZP_07893457.1| NAD-dependent DNA ligase LigA [Campylobacter upsaliensis JV21] gi|315481623|gb|EFU72246.1| NAD-dependent DNA ligase LigA [Campylobacter upsaliensis JV21] Length = 644 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 6/64 (9%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +S+ +E+ L + YY D+PL +D YDR+ + A +++ P L D P Sbjct: 1 MSEYLKKVELANL------WMRAYYEEDEPLASDEEYDRLIREIKAFEKENPSLISPDSP 54 Query: 114 WNTV 117 + Sbjct: 55 TQKI 58 >gi|302392792|ref|YP_003828612.1| DNA ligase, NAD-dependent [Acetohalobium arabaticum DSM 5501] gi|302204869|gb|ADL13547.1| DNA ligase, NAD-dependent [Acetohalobium arabaticum DSM 5501] Length = 671 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E++ L+ + YY LDDPL +D YD++ +RL L+E+ ++ P VG Sbjct: 8 EQEMKKLINKLNKYNYHYYVLDDPLVSDKEYDQLYDRLVELEEETGKVLSG-SPTQRVG 65 >gi|208434535|ref|YP_002266201.1| DNA ligase [Helicobacter pylori G27] gi|254781346|sp|B5Z6Y6|DNLJ_HELPG RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|208432464|gb|ACI27335.1| DNA ligase [Helicobacter pylori G27] Length = 658 Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 S+ E + + YL HH YY LD+ + +D +YD + + L A +E+ P + P Sbjct: 4 SQKEYLERIAYL-NTLSHH---YYNLDESIVSDAVYDELYQELKAYEEKNPNDIQANSPT 59 Query: 115 NTVG 118 VG Sbjct: 60 QKVG 63 >gi|299144358|ref|ZP_07037438.1| DNA ligase, NAD-dependent [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518843|gb|EFI42582.1| DNA ligase, NAD-dependent [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 664 Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E + + L+ YY LDDP+ +D YD + L L+++ ++ + P V Sbjct: 2 EIIDRIRELIDKVNKLNYHYYTLDDPIVSDAEYDELYYELKKLEDEN-KIILANSPTTRV 60 Query: 118 G 118 G Sbjct: 61 G 61 >gi|228982993|ref|ZP_04143252.1| DNA ligase, NAD-dependent [Bacillus thuringiensis Bt407] gi|228777176|gb|EEM25484.1| DNA ligase, NAD-dependent [Bacillus thuringiensis Bt407] Length = 669 Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +++ L + + H Y P+ TD YD++ L +L+E+ PE DE+ P + Sbjct: 2 IEQKIKQLREEVMKHDLLY-DEGTPIITDSEYDQMYYELVSLEEKHPEFADENSPTKRI 59 >gi|302874256|ref|YP_003842889.1| DNA ligase, NAD-dependent [Clostridium cellulovorans 743B] gi|307689480|ref|ZP_07631926.1| NAD-dependent DNA ligase LigA [Clostridium cellulovorans 743B] gi|302577113|gb|ADL51125.1| DNA ligase, NAD-dependent [Clostridium cellulovorans 743B] Length = 665 Score = 68.0 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + ++ +E L++ YY LD+P +D YD++ + L L+++ P Sbjct: 1 MEISDSKKRIEELIEQLNKFAYEYYALDNPSISDKEYDKLYDELTILEKE-TGYILSYSP 59 Query: 114 WNTVG 118 VG Sbjct: 60 TQRVG 64 >gi|166154367|ref|YP_001654485.1| NAD-dependent DNA ligase LigA [Chlamydia trachomatis 434/Bu] gi|166155242|ref|YP_001653497.1| NAD-dependent DNA ligase LigA [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335620|ref|ZP_07223864.1| NAD-dependent DNA ligase LigA [Chlamydia trachomatis L2tet1] gi|254781287|sp|B0B9Q4|DNLJ_CHLT2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781289|sp|B0BBD3|DNLJ_CHLTB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|165930355|emb|CAP03841.1| NAD-dependent DNA ligase [Chlamydia trachomatis 434/Bu] gi|165931230|emb|CAP06795.1| NAD-dependent DNA ligase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 663 Score = 67.6 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + H + YY L+ P +D YD L ++ Q PE P +G Sbjct: 12 LCTELVEHDRRYYALNQPTISDYSYDMKMRELQEIEVQHPEWKVSWSPTMYLG 64 >gi|261749390|ref|YP_003257075.1| DNA ligase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497482|gb|ACX83932.1| DNA ligase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 678 Score = 67.6 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 29/64 (45%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 ++ + ++ L K + YY L+ +D +D+ L L+++ PE +D P Sbjct: 6 NQKDIKEKIYQLRKKLSEYNYQYYALNTSEISDYNFDKKLRELFLLEKEHPEFYDPSSPT 65 Query: 115 NTVG 118 +G Sbjct: 66 LRIG 69 >gi|261337889|ref|ZP_05965773.1| DNA ligase, NAD-dependent [Bifidobacterium gallicum DSM 20093] gi|270277364|gb|EFA23218.1| DNA ligase, NAD-dependent [Bifidobacterium gallicum DSM 20093] Length = 906 Score = 67.6 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 27/69 (39%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V +L A + Q YY P+ +D YD L+A++ +PEL Sbjct: 32 DVPALGAERARTLWRKVASWVEADQVAYYIDSAPISSDAAYDARLRFLEAMERAYPELDV 91 Query: 110 EDHPWNTVG 118 P + VG Sbjct: 92 PSSPTHRVG 100 >gi|166788183|emb|CAP40308.1| NAD-dependent DNA ligase [Candidatus Phytoplasma solani] Length = 333 Score = 67.2 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 28/60 (46%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A+ +++ LVK+ YY L +P D YD + + L L+ +P+ P +G Sbjct: 5 AIKKIKSLVKLLNEANYQYYNLSNPKINDQQYDALLKELIILETNYPQHRLPYSPTLKIG 64 >gi|255348508|ref|ZP_05380515.1| NAD-dependent DNA ligase LigA [Chlamydia trachomatis 70] gi|255503049|ref|ZP_05381439.1| NAD-dependent DNA ligase LigA [Chlamydia trachomatis 70s] gi|255506721|ref|ZP_05382360.1| NAD-dependent DNA ligase LigA [Chlamydia trachomatis D(s)2923] gi|296434735|gb|ADH16913.1| NAD-dependent DNA ligase LigA [Chlamydia trachomatis E/150] gi|296438453|gb|ADH20606.1| NAD-dependent DNA ligase LigA [Chlamydia trachomatis E/11023] Length = 663 Score = 67.2 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + H + YY L+ P +D YD L ++ Q PE P +G Sbjct: 12 LCTELVEHDRCYYVLNQPTISDYSYDVKMRELQEIEVQHPEWKVSWSPTMYLG 64 >gi|28211984|ref|NP_782928.1| NAD-dependent DNA ligase LigA [Clostridium tetani E88] gi|75541732|sp|Q891I0|DNLJ_CLOTE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|28204427|gb|AAO36865.1| NAD-dependent DNA ligase [Clostridium tetani E88] Length = 668 Score = 67.2 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 1/62 (1%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E + L++ + YY LD+P +D YD+ + L L+++ P Sbjct: 5 EEKKRRIHELIEELNKYAYEYYVLDNPTVSDKEYDKRYDELVNLEKE-TGFVLSYSPTQR 63 Query: 117 VG 118 VG Sbjct: 64 VG 65 >gi|76788861|ref|YP_327947.1| NAD-dependent DNA ligase LigA [Chlamydia trachomatis A/HAR-13] gi|123731251|sp|Q3KMM3|DNLJ_CHLTA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|76167391|gb|AAX50399.1| NAD-dependent DNA ligase [Chlamydia trachomatis A/HAR-13] Length = 663 Score = 67.2 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + H + YY L+ P +D YD L ++ Q PE P +G Sbjct: 12 LCTELVEHDRCYYVLNQPTISDYSYDVKMRELQEIEVQHPEWKVSWSPTMYLG 64 >gi|300933643|ref|ZP_07148899.1| NAD-dependent DNA ligase LigA [Corynebacterium resistens DSM 45100] Length = 680 Score = 67.2 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 3/64 (4%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ E + L H++ YY D P +D +D + +L L+++ PEL P Sbjct: 1 MTTSE--NRWQELADEVRLHRERYYYGD-PTISDADFDALLAQLRTLEDEHPELVTGPSP 57 Query: 114 WNTV 117 V Sbjct: 58 LTEV 61 >gi|111115379|ref|YP_709997.1| DNA ligase [Borrelia afzelii PKo] gi|123145685|sp|Q0SMV7|DNLJ_BORAP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|110890653|gb|ABH01821.1| DNA ligase [Borrelia afzelii PKo] Length = 660 Score = 67.2 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 25/62 (40%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + E+ L K+ K YY P D +YD+ RL L+ + PE D P Sbjct: 3 SKIQQEIADLKKLIRKWDKEYYVDSLPSVEDFVYDKHILRLQELESKCPEYKTLDSPTLK 62 Query: 117 VG 118 G Sbjct: 63 FG 64 >gi|86138407|ref|ZP_01056981.1| DNA ligase, NAD-dependent [Roseobacter sp. MED193] gi|85824932|gb|EAQ45133.1| DNA ligase, NAD-dependent [Roseobacter sp. MED193] Length = 752 Score = 67.2 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 30/69 (43%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 + LS+ +A E L + Y++ D P +D YD R L E FPEL D Sbjct: 8 DPSGLSQEQAQAEFLELQTQLAAADQAYHQNDAPFLSDAAYDAAKRRYKVLAEAFPELKD 67 Query: 110 EDHPWNTVG 118 ++VG Sbjct: 68 IATQLDSVG 76 >gi|284037426|ref|YP_003387356.1| DNA ligase, NAD-dependent [Spirosoma linguale DSM 74] gi|283816719|gb|ADB38557.1| DNA ligase, NAD-dependent [Spirosoma linguale DSM 74] Length = 696 Score = 67.2 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 24/59 (40%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + YY+ D +D++ L AL+ Q+PE D P VG Sbjct: 4 EEQIIDLTNRLNQYNFQYYQNSISEVDDFTFDKLLADLTALENQYPEFRQPDSPTARVG 62 >gi|58617448|ref|YP_196647.1| DNA ligase [Ehrlichia ruminantium str. Gardel] gi|75356732|sp|Q5FG20|DNLJ_EHRRG RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|58417060|emb|CAI28173.1| DNA ligase [Ehrlichia ruminantium str. Gardel] Length = 674 Score = 67.2 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 9/74 (12%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD----- 109 + EA + ++ L + +H YY D P +D YD + + + E+FP L Sbjct: 3 DQEEAKLILDKLNEKIRYHDLLYYTQDSPEISDAEYDDLCHQRSIILEKFPSLNSYYQDY 62 Query: 110 ----EDHPWNTVGY 119 D ++ V + Sbjct: 63 IGGDPDSRFSKVKH 76 >gi|57239421|ref|YP_180557.1| DNA ligase [Ehrlichia ruminantium str. Welgevonden] gi|58579393|ref|YP_197605.1| DNA ligase [Ehrlichia ruminantium str. Welgevonden] gi|81352823|sp|Q5HAI7|DNLJ_EHRRW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|57161500|emb|CAH58426.1| NAD-dependent DNA ligase [Ehrlichia ruminantium str. Welgevonden] gi|58418019|emb|CAI27223.1| DNA ligase [Ehrlichia ruminantium str. Welgevonden] Length = 674 Score = 67.2 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 9/74 (12%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD----- 109 + EA + ++ L + +H YY D P +D YD + + + E+FP L Sbjct: 3 DQEEAKLILDKLNEKIRYHDLLYYTQDSPEISDAEYDDLCHQRSIILEKFPSLNSYYQDY 62 Query: 110 ----EDHPWNTVGY 119 D ++ V + Sbjct: 63 IGGDPDSRFSKVKH 76 >gi|168017901|ref|XP_001761485.1| predicted protein [Physcomitrella patens subsp. patens] gi|162687169|gb|EDQ73553.1| predicted protein [Physcomitrella patens subsp. patens] Length = 1163 Score = 66.8 bits (162), Expect = 8e-10, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 30/65 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L G+ + VE L ++ + Y+ L +PL +D YD + L L+ + P E+ Sbjct: 311 LVDGDILDRVETLRRVIADYSYQYHTLGNPLISDSAYDALVRELKDLESKLPAEASEESV 370 Query: 114 WNTVG 118 VG Sbjct: 371 TAKVG 375 >gi|322379711|ref|ZP_08054024.1| NAD-dependent DNA ligase LigA [Helicobacter suis HS5] gi|321147860|gb|EFX42447.1| NAD-dependent DNA ligase LigA [Helicobacter suis HS5] Length = 762 Score = 66.8 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + + ++LV + YY L PL +D +YD++ ++ + ++P+ P V Sbjct: 3 QTFEDYKHLVDKLCQYAYHYYVLASPLISDAIYDQLYRQVLDYETKYPQNILPYSPTQRV 62 Query: 118 G 118 G Sbjct: 63 G 63 >gi|304440548|ref|ZP_07400435.1| NAD-dependent DNA ligase LigA [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371026|gb|EFM24645.1| NAD-dependent DNA ligase LigA [Peptoniphilus duerdenii ATCC BAA-1640] Length = 650 Score = 66.8 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV++ + YY LD+PL D YDR+ + L L+++ D P N VG Sbjct: 3 KRIDELVELLNKYSYHYYTLDEPLVADVEYDRLYDELVKLEKE-TGYIRPDSPTNRVG 59 >gi|322379217|ref|ZP_08053608.1| NAD-dependent DNA ligase LigA [Helicobacter suis HS1] gi|321148357|gb|EFX42866.1| NAD-dependent DNA ligase LigA [Helicobacter suis HS1] Length = 680 Score = 66.8 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 29/61 (47%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + + ++LV + YY L PL +D +YD++ ++ + ++P+ P V Sbjct: 3 QTFEDYKHLVDKLCQYAYHYYVLASPLISDAIYDQLYRQVLDYETKYPQNILPYSPTQRV 62 Query: 118 G 118 G Sbjct: 63 G 63 >gi|182419331|ref|ZP_02950583.1| DNA ligase, NAD-dependent [Clostridium butyricum 5521] gi|237666454|ref|ZP_04526439.1| DNA ligase, NAD-dependent [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376662|gb|EDT74234.1| DNA ligase, NAD-dependent [Clostridium butyricum 5521] gi|237657653|gb|EEP55208.1| DNA ligase, NAD-dependent [Clostridium butyricum E4 str. BoNT E BL5262] Length = 663 Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ LV+ ++ YY LDDP TD YD++ + L L+E+ P VG Sbjct: 4 KEKIKELVEQLNNYSYKYYVLDDPSVTDKEYDKIYDELKKLEEE-TGFVLPYSPTLRVG 61 >gi|294790698|ref|ZP_06755856.1| DNA ligase, NAD-dependent [Scardovia inopinata F0304] gi|294458595|gb|EFG26948.1| DNA ligase, NAD-dependent [Scardovia inopinata F0304] Length = 815 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 27/69 (39%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 V L +A + Q YY D P+ +D YD + L L+ FP+L + Sbjct: 24 NVADLDTSQAAHLWAKVASWVEDDQLAYYVNDSPISSDAAYDERMKTLQRLEAHFPQLDN 83 Query: 110 EDHPWNTVG 118 + VG Sbjct: 84 PQSLTHRVG 92 >gi|182413875|ref|YP_001818941.1| DNA ligase, NAD-dependent [Opitutus terrae PB90-1] gi|254778152|sp|B1ZMR3|DNLJ2_OPITP RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 2 gi|177841089|gb|ACB75341.1| DNA ligase, NAD-dependent [Opitutus terrae PB90-1] Length = 708 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 26/52 (50%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S+++ E++ +E L H Y+R P +D YD + + L L+ +F Sbjct: 37 SVAETESLRRLELLRVEIARHDDLYFRKAQPEISDADYDALKQELRELESRF 88 >gi|154148661|ref|YP_001406577.1| NAD-dependent DNA ligase LigA [Campylobacter hominis ATCC BAA-381] gi|166215571|sp|A7I236|DNLJ_CAMHC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|153804670|gb|ABS51677.1| DNA ligase, NAD-dependent [Campylobacter hominis ATCC BAA-381] Length = 645 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%) Query: 60 MIEVEYLV--KIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 M E EYL ++ K YY D+PL TD YD + ++++ + +FP+L P N V Sbjct: 1 MSEAEYLKAVEMLNIWAKAYYTQDNPLATDIEYDVLYKKVETFENEFPDLKVSYSPTNRV 60 Query: 118 G 118 G Sbjct: 61 G 61 >gi|302558233|ref|ZP_07310575.1| DNA ligase, NAD-dependent [Streptomyces griseoflavus Tu4000] gi|302475851|gb|EFL38944.1| DNA ligase, NAD-dependent [Streptomyces griseoflavus Tu4000] Length = 731 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 31/62 (50%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 EA + L + H+ YY D P+ +D +DR+ L+AL+E+ PEL D P Sbjct: 13 PAEAREKHAKLAERIEEHRFRYYVNDAPVISDADFDRLLRELEALEEEHPELRTPDSPTQ 72 Query: 116 TV 117 V Sbjct: 73 KV 74 >gi|148377548|ref|YP_001256424.1| DNA ligase [Mycoplasma agalactiae PG2] gi|254781374|sp|A5IY71|DNLJ_MYCAP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|148291594|emb|CAL58980.1| DNA ligase [Mycoplasma agalactiae PG2] Length = 654 Score = 66.0 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K EA ++ LV+ YY+L+ P +D YD+ L+ L+++ P+L + P Sbjct: 1 MQKEEAKELIKSLVEKINQWNYEYYQLNKPSVSDLEYDKALLELEKLEKEHPDLILSNSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 TFRIG 65 >gi|255316598|ref|ZP_05358181.1| DNA ligase, NAD-dependent [Clostridium difficile QCD-76w55] Length = 663 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++ L + + H Y DP+ +D YD++ +L L+E +PE DE+ P + Sbjct: 3 KVEEKIRDLREEVIKHDLAY-AKGDPIISDTEYDKLYLKLVGLEELYPEYSDENSPTKRI 61 >gi|32482045|gb|AAP49289.1| NAD-dependent DNA ligase [Bacillus sp. IMG-1] Length = 107 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 14/32 (43%), Positives = 20/32 (62%) Query: 87 DGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 D YDR+ + L A++EQ+PEL D P +G Sbjct: 1 DAEYDRLMQELIAIEEQYPELKTSDSPTQRIG 32 >gi|88608555|ref|YP_506384.1| DNA ligase, NAD-dependent [Neorickettsia sennetsu str. Miyayama] gi|123736355|sp|Q2GDR2|DNLJ_NEOSM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|88600724|gb|ABD46192.1| DNA ligase, NAD-dependent [Neorickettsia sennetsu str. Miyayama] Length = 670 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 26/50 (52%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 EA E++ L + L H K YY+ D P TD YD + +R L E P L Sbjct: 2 EAKKEIQELYEKLLRHNKKYYQDDSPEITDAEYDSIKDRYLKLLEANPSL 51 >gi|88607345|ref|YP_504763.1| DNA ligase, NAD-dependent [Anaplasma phagocytophilum HZ] gi|123736456|sp|Q2GLI8|DNLJ_ANAPZ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|88598408|gb|ABD43878.1| DNA ligase, NAD-dependent [Anaplasma phagocytophilum HZ] Length = 677 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 24/54 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 +S ++ + L H Y+ D P +D YD + + L E+FPEL Sbjct: 1 MSDNDSRRRLADLNAQLKLHDVLYHEHDAPEISDAQYDALVQEKRELLEKFPEL 54 >gi|313888253|ref|ZP_07821924.1| DNA ligase (NAD+) [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845656|gb|EFR33046.1| DNA ligase (NAD+) [Peptoniphilus harei ACS-146-V-Sch2b] Length = 665 Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + E+E L+K YY LDDPL +D YD++ ++L L+++ P VG Sbjct: 5 IKEMENLIKEIDKLNYHYYTLDDPLLSDAEYDKLYDKLVNLEKE-SGTVLPYSPTTRVG 62 >gi|57241999|ref|ZP_00369939.1| DNA ligase, NAD-dependent [Campylobacter upsaliensis RM3195] gi|57017191|gb|EAL53972.1| DNA ligase, NAD-dependent [Campylobacter upsaliensis RM3195] Length = 644 Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 64 EYLVKIALH--HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 EYL K+AL + YY D+PL +D YDR+ + +++ P L D P + Sbjct: 3 EYLKKVALANLWMRAYYEEDEPLASDEEYDRLIREIKVFEKENPSLISPDSPTQKI 58 >gi|256545196|ref|ZP_05472562.1| DNA ligase, NAD-dependent [Anaerococcus vaginalis ATCC 51170] gi|256399237|gb|EEU12848.1| DNA ligase, NAD-dependent [Anaerococcus vaginalis ATCC 51170] Length = 668 Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 I+++ L+ YY LD+P +DG YD++ + L L+++ +E P VG Sbjct: 6 KIKIDELIDKINELNYHYYTLDNPTVSDGEYDKLYDELLNLEKK-TGYVNEFSPTQRVG 63 >gi|302668858|ref|YP_003832683.1| NAD-dependent DNA ligase LigA2 [Butyrivibrio proteoclasticus B316] gi|302397198|gb|ADL36101.1| NAD-dependent DNA ligase LigA2 [Butyrivibrio proteoclasticus B316] Length = 745 Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 34/74 (45%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 +++ + T+L + + + E L + + YY D P +D YD + +L A +++ Sbjct: 1 MNEIELNTALGEQLSKKDYEKLKNKLMDLARAYYDDDAPKVSDHEYDMLMVQLKACEKKN 60 Query: 105 PELFDEDHPWNTVG 118 P +D +G Sbjct: 61 PSWVTDDSISQVIG 74 >gi|241668131|ref|ZP_04755709.1| DNA ligase (NAD(+)) [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876666|ref|ZP_05249376.1| DNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842687|gb|EET21101.1| DNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 678 Score = 64.9 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 32/71 (45%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + +L+K + ++ L + Y+ +D P+ TD YD++ L L + P+L Sbjct: 8 STDYKTLTKAQLKSYIDDLAEYLGEQSYLYHTIDKPVITDSDYDKLFRLLQDLVDDNPQL 67 Query: 108 FDEDHPWNTVG 118 + + VG Sbjct: 68 KPSNSVLDRVG 78 >gi|32396672|gb|AAP49293.1| NAD-dependent DNA ligase [Geobacillus thermodenitrificans] gi|32396682|gb|AAP49297.1| NAD-dependent DNA ligase [Bacillus coagulans] Length = 107 Score = 64.9 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 14/32 (43%), Positives = 20/32 (62%) Query: 87 DGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 D YDR+ + L A++EQ+PEL D P +G Sbjct: 1 DAEYDRLMQELMAIEEQYPELKTSDSPTQRIG 32 >gi|257066474|ref|YP_003152730.1| NAD-dependent DNA ligase LigA [Anaerococcus prevotii DSM 20548] gi|256798354|gb|ACV29009.1| DNA ligase, NAD-dependent [Anaerococcus prevotii DSM 20548] Length = 666 Score = 64.9 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L++ + YY LD+PL +DG YD++ + L L+E+ +D P VG Sbjct: 4 REKIDKLIEKIENLNYHYYTLDEPLVSDGEYDQIYDELRKLEEE-TGYVRDDSPTQVVG 61 >gi|89069525|ref|ZP_01156869.1| DNA ligase, NAD-dependent [Oceanicola granulosus HTCC2516] gi|89044860|gb|EAR50950.1| DNA ligase, NAD-dependent [Oceanicola granulosus HTCC2516] Length = 739 Score = 64.9 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 19/36 (52%) Query: 83 PLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 P+ D YD + R AL+ +FPEL D P VG Sbjct: 30 PIMDDAAYDALKRRNAALEARFPELMRADSPTGQVG 65 >gi|160947381|ref|ZP_02094548.1| hypothetical protein PEPMIC_01315 [Parvimonas micra ATCC 33270] gi|158446515|gb|EDP23510.1| hypothetical protein PEPMIC_01315 [Parvimonas micra ATCC 33270] Length = 662 Score = 64.9 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 M +++ +V+ YY LD+P +D YD++ + L L+++ + + P VG Sbjct: 1 MDKMKEIVEKLNLWAYQYYTLDEPSVSDAEYDKLYDELLKLEKE-TGVILPNSPTQRVG 58 >gi|297156986|gb|ADI06698.1| NAD-dependent DNA ligase LigA [Streptomyces bingchenggensis BCW-1] Length = 728 Score = 64.9 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 31/62 (50%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWN 115 EA + L + H+ YY D P+ +D +DR+ L+AL+E++ EL D P Sbjct: 10 PAEARDKHAILAEQVEEHRFRYYVKDAPIVSDAEFDRLLRELEALEEEYTELRTPDSPTQ 69 Query: 116 TV 117 V Sbjct: 70 KV 71 >gi|167041226|gb|ABZ05983.1| putative NAD-dependent DNA ligase adenylation domain protein [uncultured marine microorganism HF4000_001N02] Length = 727 Score = 64.5 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 7/67 (10%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + +G +E L ++ HH YY P+ TD YD + + L L P+L Sbjct: 4 EGIEEGAQSARIEELAQLLAHHSDLYYNEAAPVITDAEYDLLFDELKRLDPTHPQL---- 59 Query: 112 HPWNTVG 118 + VG Sbjct: 60 ---DRVG 63 >gi|257460489|ref|ZP_05625590.1| DNA ligase, NAD-dependent [Campylobacter gracilis RM3268] gi|257441820|gb|EEV16962.1| DNA ligase, NAD-dependent [Campylobacter gracilis RM3268] Length = 668 Score = 64.5 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 24/57 (42%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E V + YY D P+ +D YD + + + +EQ PEL P +G Sbjct: 5 EYRSAVDTLNAWARAYYTDDRPIASDEEYDELYSQAEKFEEQNPELALSYSPTRRIG 61 >gi|167627564|ref|YP_001678064.1| DNA ligase (NAD(+)) [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|190359258|sp|B0TY02|DNLJ_FRAP2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|167597565|gb|ABZ87563.1| DNA ligase (NAD(+)) [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 678 Score = 64.1 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 32/71 (45%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + +L+K + ++ L + Y+ +D P+ TD YD++ L L + P+L Sbjct: 8 SIDYKTLTKAQLKSYIDDLAEYLGEQSYLYHTIDKPVITDSDYDKLFRLLQDLVDDNPQL 67 Query: 108 FDEDHPWNTVG 118 + + VG Sbjct: 68 KPSNSVLDRVG 78 >gi|291320206|ref|YP_003515467.1| DNA ligase [Mycoplasma agalactiae] gi|290752538|emb|CBH40510.1| DNA ligase [Mycoplasma agalactiae] Length = 654 Score = 64.1 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K +A ++ LV+ YY+L+ P +D YD+ L+ L+++ P+L + P Sbjct: 1 MQKEKAKELIKSLVETINQWNYEYYQLNKPSVSDLEYDKALLELEKLEKEHPDLILNNSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 TFRIG 65 >gi|315637028|ref|ZP_07892251.1| NAD-dependent DNA ligase LigA [Arcobacter butzleri JV22] gi|315478564|gb|EFU69274.1| NAD-dependent DNA ligase LigA [Arcobacter butzleri JV22] Length = 648 Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++K E + +E L+ YY D+P+ TD YD+++ A +++ P+L + P Sbjct: 1 MTKEEYDLNIEKLIS----WANAYYVFDNPIATDEEYDKLARLCLAYEQENPKLSHPNSP 56 Query: 114 WNTVG 118 VG Sbjct: 57 NKRVG 61 >gi|157737313|ref|YP_001489996.1| NAD-dependent DNA ligase LigA [Arcobacter butzleri RM4018] gi|166215390|sp|A8ETQ3|DNLJ_ARCB4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157699167|gb|ABV67327.1| DNA ligase [Arcobacter butzleri RM4018] Length = 648 Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++K E + +E L+ YY D+P+ TD YD+++ A +++ P+L + P Sbjct: 1 MTKEEYDLNIEKLIS----WANAYYVFDNPIATDEEYDKLARLCLAYEQENPKLSHPNSP 56 Query: 114 WNTVG 118 VG Sbjct: 57 NKRVG 61 >gi|325068288|ref|ZP_08126961.1| DNA ligase (NAD(+)) [Actinomyces oris K20] Length = 818 Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 5/87 (5%) Query: 36 PNKRALESWLDKAKKVTSLS--KGEAMIEVEYLVKIALHHQKWYY-RLDDPL-FTDGLYD 91 P AL S + LS A LV+ + YY +D +D YD Sbjct: 12 PAP-ALSSARSDQRGPVDLSAIPSAARERWSELVRDIEAARDAYYNAIDAESPLSDADYD 70 Query: 92 RVSERLDALQEQFPELFDEDHPWNTVG 118 + L+ L+ +P L P +VG Sbjct: 71 LLYRELEGLEAAYPLLARAGSPTRSVG 97 >gi|296273134|ref|YP_003655765.1| DNA ligase, NAD-dependent [Arcobacter nitrofigilis DSM 7299] gi|296097308|gb|ADG93258.1| DNA ligase, NAD-dependent [Arcobacter nitrofigilis DSM 7299] Length = 648 Score = 63.7 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E + I + YY D+P +D YD++S A +++ P L + P VG Sbjct: 3 QNEYNEKINILISWAIAYYVEDNPQASDEEYDKLSRECLAYEQENPSLSHPNSPNKRVG 61 >gi|225389801|ref|ZP_03759525.1| hypothetical protein CLOSTASPAR_03549 [Clostridium asparagiforme DSM 15981] gi|225044136|gb|EEG54382.1| hypothetical protein CLOSTASPAR_03549 [Clostridium asparagiforme DSM 15981] Length = 673 Score = 63.7 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E + + + L ++ YY L+ P +D +YDR+ E L L+ Q + + P +T Sbjct: 3 QELIRKQQDLTARLNRYRHEYYNLNAPSISDAVYDRLFEELQDLERQ-TGIQMANSPTST 61 Query: 117 VGY 119 VGY Sbjct: 62 VGY 64 >gi|302382738|ref|YP_003818561.1| DNA ligase, NAD-dependent [Brevundimonas subvibrioides ATCC 15264] gi|302193366|gb|ADL00938.1| DNA ligase, NAD-dependent [Brevundimonas subvibrioides ATCC 15264] Length = 777 Score = 63.7 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 18/36 (50%) Query: 83 PLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 P +D YD + R A++ +FP L D P VG Sbjct: 42 PTVSDADYDAMKARNLAIETRFPALVRSDSPSLKVG 77 >gi|29840375|ref|NP_829481.1| NAD-dependent DNA ligase LigA [Chlamydophila caviae GPIC] gi|75539575|sp|Q822R2|DNLJ_CHLCV RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|29834724|gb|AAP05359.1| DNA ligase [Chlamydophila caviae GPIC] Length = 662 Score = 63.7 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + + L K YY L + + +D YD ++L A++ Q PE P +G Sbjct: 6 SREQYLSLCKELEKDDYCYYVLHNAVISDYDYDMKMQKLLAIEAQHPEWKVLWSPSMRLG 65 >gi|15895931|ref|NP_349280.1| NAD-dependent DNA ligase LigA [Clostridium acetobutylicum ATCC 824] gi|81529669|sp|Q97FQ5|DNLJ2_CLOAB RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 2 gi|15025704|gb|AAK80620.1|AE007765_2 NAD-dependent DNA ligase [Clostridium acetobutylicum ATCC 824] Length = 669 Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Query: 54 LSKGEA-MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +++ E+ ++ ++ L++ + YY LD+P+ D YD+ + L L+E+ + Sbjct: 1 MNEKESNILRMQELIEELNKYSYSYYVLDNPIVADKEYDKRYDELVELEEK-TGITYPYS 59 Query: 113 PWNTVG 118 P N VG Sbjct: 60 PTNRVG 65 >gi|168179082|ref|ZP_02613746.1| DNA ligase, NAD-dependent [Clostridium botulinum NCTC 2916] gi|182670115|gb|EDT82091.1| DNA ligase, NAD-dependent [Clostridium botulinum NCTC 2916] Length = 664 Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ LV+ + YY LD+P +D YD + L L+++ E+ P VG Sbjct: 6 EKMKELVEELNQYAYEYYVLDNPSISDKEYDLKYDELVILEKK-TEVTLPYSPTQRVG 62 >gi|325510083|gb|ADZ21719.1| NAD-dependent DNA ligase LigA [Clostridium acetobutylicum EA 2018] Length = 669 Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Query: 54 LSKGEA-MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 +++ E+ ++ ++ L++ + YY LD+P+ D YD+ + L L+E+ + Sbjct: 1 MNEKESNILRMQELIEELNKYSYSYYVLDNPIVADKEYDKRYDELVELEEK-TGITYPYS 59 Query: 113 PWNTVG 118 P N VG Sbjct: 60 PTNRVG 65 >gi|254796855|ref|YP_003081692.1| DNA ligase, NAD-dependent [Neorickettsia risticii str. Illinois] gi|254590064|gb|ACT69426.1| DNA ligase, NAD-dependent [Neorickettsia risticii str. Illinois] Length = 670 Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 25/50 (50%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 +A E++ L + L H K YY+ D P TD YD + R L E P L Sbjct: 2 KAKKEIQELYEKLLRHNKKYYQDDSPEITDAEYDSIKGRYLKLLEANPSL 51 >gi|226950696|ref|YP_002805787.1| DNA ligase, NAD-dependent [Clostridium botulinum A2 str. Kyoto] gi|254781293|sp|C1FLS8|DNLJ_CLOBJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|226842063|gb|ACO84729.1| DNA ligase, NAD-dependent [Clostridium botulinum A2 str. Kyoto] Length = 664 Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ LV+ + YY LD+P +D YD + L L+++ E+ P VG Sbjct: 6 EKMKELVEELNQYAYEYYVLDNPSISDKEYDLKYDELVILEKK-TEVTLPYSPTQRVG 62 >gi|32396667|gb|AAP49291.1| NAD-dependent DNA ligase [Bacillus sp. IMG-2] Length = 107 Score = 63.7 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 14/32 (43%), Positives = 17/32 (53%) Query: 87 DGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 D YDR L L+E++PEL D P VG Sbjct: 1 DAEYDRFMRELIELEEKYPELKTPDSPSQRVG 32 >gi|297588239|ref|ZP_06946882.1| DNA ligase (NAD(+)) [Finegoldia magna ATCC 53516] gi|297573612|gb|EFH92333.1| DNA ligase (NAD(+)) [Finegoldia magna ATCC 53516] Length = 662 Score = 63.3 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E ++YLV I + YY LDDPL D YD + + L L+++ + + P N + Sbjct: 2 EKKDRIKYLVDILNKYAYHYYTLDDPLIEDSEYDVLYDELVNLEKE-TGIVLPNSPTNRI 60 Query: 118 G 118 G Sbjct: 61 G 61 >gi|322807581|emb|CBZ05156.1| DNA ligase [Clostridium botulinum H04402 065] Length = 664 Score = 63.3 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ LV+ + YY LD+P +D YD + L L+++ E+ P VG Sbjct: 6 EKMKELVEELNQYAYEYYVLDNPSISDKEYDLKYDELVILEKK-TEVTLPYSPTQRVG 62 >gi|317062114|ref|ZP_07926599.1| NAD-dependent DNA ligase [Fusobacterium ulcerans ATCC 49185] gi|313687790|gb|EFS24625.1| NAD-dependent DNA ligase [Fusobacterium ulcerans ATCC 49185] Length = 665 Score = 63.3 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 27/53 (50%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + ++YY ++ L +D YD + L L+E++PE E P VG Sbjct: 1 MRADLLKYNQYYYTNNESLISDVEYDMLMNELKELEEKYPEYKSEASPTVIVG 53 >gi|170756080|ref|YP_001782894.1| NAD-dependent DNA ligase LigA [Clostridium botulinum B1 str. Okra] gi|254781294|sp|B1ING1|DNLJ_CLOBK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|169121292|gb|ACA45128.1| DNA ligase, NAD-dependent [Clostridium botulinum B1 str. Okra] Length = 664 Score = 63.3 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ LV+ + YY LD+P +D YD + L L+++ E+ P VG Sbjct: 6 EKMKELVEELNQYAYEYYVLDNPSISDKEYDLKYDELVILEKK-TEVTLPYSPTQRVG 62 >gi|153940260|ref|YP_001392616.1| NAD-dependent DNA ligase LigA [Clostridium botulinum F str. Langeland] gi|166215578|sp|A7GIK6|DNLJ_CLOBL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|152936156|gb|ABS41654.1| DNA ligase, NAD-dependent [Clostridium botulinum F str. Langeland] gi|295320603|gb|ADG00981.1| DNA ligase, NAD-dependent [Clostridium botulinum F str. 230613] Length = 664 Score = 63.3 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ LV+ + YY LD+P +D YD + L L+++ E+ P VG Sbjct: 6 EKMKELVEELNQYAYEYYVLDNPSISDKEYDLKYDELVILEKK-TEVTLPYSPTQRVG 62 >gi|124006376|ref|ZP_01691210.1| DNA ligase, NAD-dependent [Microscilla marina ATCC 23134] gi|123988033|gb|EAY27704.1| DNA ligase, NAD-dependent [Microscilla marina ATCC 23134] Length = 691 Score = 63.3 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ EA + L K H+ YY+ + TD +D++ E L L+E+FP+ +D P Sbjct: 1 MTNQEAQERIRELSKDLHHYNYMYYQKHVSVVTDYKFDKLLEELIDLEEKFPQFKKDDSP 60 Query: 114 WNTVG 118 VG Sbjct: 61 SQRVG 65 >gi|57168176|ref|ZP_00367315.1| DNA ligase (NAD) Cj0586 [Campylobacter coli RM2228] gi|57020550|gb|EAL57219.1| DNA ligase (NAD) Cj0586 [Campylobacter coli RM2228] Length = 467 Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++K E + +V +A + YY D+PL +D YD + L +EQ + +D P Sbjct: 1 MTKKEYLEKVA----LAASWMRAYYEKDEPLASDEEYDALIRELRVFEEQNKDEISKDSP 56 Query: 114 WNTV 117 + Sbjct: 57 TQKI 60 >gi|212696137|ref|ZP_03304265.1| hypothetical protein ANHYDRO_00673 [Anaerococcus hydrogenalis DSM 7454] gi|212676766|gb|EEB36373.1| hypothetical protein ANHYDRO_00673 [Anaerococcus hydrogenalis DSM 7454] Length = 668 Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 I+++ L+ YY LD+P+ +DG YD++ + L L+ + P VG Sbjct: 6 KIKIDELIDKINELNYHYYTLDEPIVSDGEYDKLYDELRELENS-TGYINAFSPTQRVG 63 >gi|321309600|ref|YP_004191929.1| DNA ligase [Mycoplasma haemofelis str. Langford 1] gi|319801444|emb|CBY92090.1| DNA ligase [Mycoplasma haemofelis str. Langford 1] Length = 662 Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 +E L K ++ YY D P +D +YD L L+ ++PE ED P N VG+ Sbjct: 7 IENLRKELKDLEEAYYAGD-PKESDEVYDFKLRTLLNLEHKYPEYKTEDSPSNRVGF 62 >gi|294786747|ref|ZP_06752001.1| DNA ligase, NAD-dependent [Parascardovia denticolens F0305] gi|315226368|ref|ZP_07868156.1| DNA ligase [Parascardovia denticolens DSM 10105] gi|294485580|gb|EFG33214.1| DNA ligase, NAD-dependent [Parascardovia denticolens F0305] gi|315120500|gb|EFT83632.1| DNA ligase [Parascardovia denticolens DSM 10105] Length = 868 Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 28/69 (40%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 + +L A + Q YY D P+ +D YD+ L L+ QFP L + Sbjct: 50 DLVALPVDLAARLWAKVASWVEDDQIAYYVNDSPVSSDSAYDQRMLTLQRLEAQFPALDN 109 Query: 110 EDHPWNTVG 118 P + VG Sbjct: 110 PQSPTHRVG 118 >gi|269959115|ref|YP_003328904.1| NAD-dependent DNA ligase [Anaplasma centrale str. Israel] gi|269848946|gb|ACZ49590.1| NAD-dependent DNA ligase [Anaplasma centrale str. Israel] Length = 673 Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 +A + L HH Y+ LD P TD YD + + L ++FP++ D + Sbjct: 3 EQARRRLAGLNAKLRHHDVLYHGLDAPEVTDHQYDLLVQEKKRLLDEFPDIRQYDDYADV 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|148381215|ref|YP_001255756.1| DNA ligase, NAD-dependent [Clostridium botulinum A str. ATCC 3502] gi|153931904|ref|YP_001385590.1| NAD-dependent DNA ligase LigA [Clostridium botulinum A str. ATCC 19397] gi|153935840|ref|YP_001388996.1| NAD-dependent DNA ligase LigA [Clostridium botulinum A str. Hall] gi|166215576|sp|A7FYL7|DNLJ_CLOB1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166215577|sp|A5I6Z7|DNLJ_CLOBH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|148290699|emb|CAL84829.1| DNA ligase [Clostridium botulinum A str. ATCC 3502] gi|152927948|gb|ABS33448.1| DNA ligase, NAD-dependent [Clostridium botulinum A str. ATCC 19397] gi|152931754|gb|ABS37253.1| DNA ligase, NAD-dependent [Clostridium botulinum A str. Hall] Length = 664 Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ LV+ + YY LD+P +D YD + L L+++ E+ P VG Sbjct: 6 EKMKELVEELNQYAYEYYVLDNPSISDKEYDLKYDELVILEKK-TEVTLPYSPTQRVG 62 >gi|81390835|sp|Q6AEE5|DNLJ_LEIXX RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|50951550|gb|AAT89251.1| DNA ligase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 747 Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 32/62 (51%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 +A E + L L + YY LD L +D YDR+ RL+ L+ PEL +D P T Sbjct: 3 ADARAEAQGLTTRILELRDAYYELDTVLVSDEEYDRMLRRLEELERLHPELQSQDSPTQT 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|154503603|ref|ZP_02040663.1| hypothetical protein RUMGNA_01427 [Ruminococcus gnavus ATCC 29149] gi|260589901|ref|ZP_05855814.1| DNA ligase, NAD-dependent [Blautia hansenii DSM 20583] gi|153795703|gb|EDN78123.1| hypothetical protein RUMGNA_01427 [Ruminococcus gnavus ATCC 29149] gi|260539708|gb|EEX20277.1| DNA ligase, NAD-dependent [Blautia hansenii DSM 20583] gi|291547890|emb|CBL20998.1| DNA ligase, NAD-dependent [Ruminococcus sp. SR1/5] Length = 671 Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 +++ LV + YY + P +D YDR+ + L L++Q + P TVGY Sbjct: 11 EKIKQLVDYLNLQRNAYYNENSPNISDAEYDRIFDELVELEKQ-TGFILSNSPTQTVGY 68 >gi|222474841|ref|YP_002563256.1| DNA ligase (ligA) [Anaplasma marginale str. Florida] gi|255003944|ref|ZP_05278745.1| DNA ligase (ligA) [Anaplasma marginale str. Virginia] gi|254781539|sp|B9KHN8|DNLJ_ANAMF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|222418977|gb|ACM49000.1| DNA ligase (ligA) [Anaplasma marginale str. Florida] Length = 673 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 +A + L HH Y+ LD P TD YD + + L ++FP++ D + Sbjct: 3 EQARRRLAGLNAKLRHHDMLYHGLDAPEVTDHQYDLLVQEKKRLLDEFPDIRQYDDYADV 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|32307199|gb|AAP79092.1| NAD-dependent DNA ligase [Bacillus catenulatus] Length = 107 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 13/32 (40%), Positives = 19/32 (59%) Query: 87 DGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 D YD + + L A++EQ+PEL D P +G Sbjct: 1 DAEYDLLMQELIAIEEQYPELKTSDSPTQRIG 32 >gi|161760708|ref|YP_062356.2| NAD-dependent DNA ligase LigA [Leifsonia xyli subsp. xyli str. CTCB07] Length = 755 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 32/62 (51%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 +A E + L L + YY LD L +D YDR+ RL+ L+ PEL +D P T Sbjct: 11 ADARAEAQGLTTRILELRDAYYELDTVLVSDEEYDRMLRRLEELERLHPELQSQDSPTQT 70 Query: 117 VG 118 VG Sbjct: 71 VG 72 >gi|170761523|ref|YP_001788587.1| NAD-dependent DNA ligase LigA [Clostridium botulinum A3 str. Loch Maree] gi|254781295|sp|B1L1H3|DNLJ_CLOBM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|169408512|gb|ACA56923.1| DNA ligase, NAD-dependent [Clostridium botulinum A3 str. Loch Maree] Length = 664 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ LV+ + YY LD+P +D YD + L L+++ E+ P VG Sbjct: 6 EKMKELVEELNQYAYEYYVLDNPSISDKEYDLKYDELVILEKK-TEVTLPYSPTQRVG 62 >gi|157164612|ref|YP_001467146.1| NAD-dependent DNA ligase LigA [Campylobacter concisus 13826] gi|190359238|sp|A7ZED8|DNLJ_CAMC1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|112801346|gb|EAT98690.1| DNA ligase, NAD-dependent [Campylobacter concisus 13826] Length = 647 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 23/59 (38%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E E V K YY D+PL +D YD + + A ++ P P VG Sbjct: 3 KQEYEKAVDTLNAWAKAYYDEDEPLASDEEYDALYHAVLAFEQANPSEISLFSPTKRVG 61 >gi|227499502|ref|ZP_03929609.1| DNA ligase (NAD(+)) [Anaerococcus tetradius ATCC 35098] gi|227218381|gb|EEI83632.1| DNA ligase (NAD(+)) [Anaerococcus tetradius ATCC 35098] Length = 666 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E+ L++ YY LD+PL +DG YD++ ++L L+ + + ++ P VG Sbjct: 4 REEISQLIEKINELNYHYYTLDEPLVSDGEYDKLYDKLKKLENE-SGIVLDNSPTQIVG 61 >gi|305431677|ref|ZP_07400846.1| NAD-dependent DNA ligase LigA [Campylobacter coli JV20] gi|304445272|gb|EFM37916.1| NAD-dependent DNA ligase LigA [Campylobacter coli JV20] Length = 647 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++K E + +V +A + YY D+PL +D YD + L +EQ + +D P Sbjct: 1 MTKKEYLEKVA----LAASWMRAYYEKDEPLASDEEYDALIRELRVFEEQNKDEISKDSP 56 Query: 114 WNTV 117 + Sbjct: 57 TQKI 60 >gi|205355436|ref|ZP_03222207.1| DNA ligase [Campylobacter jejuni subsp. jejuni CG8421] gi|205346670|gb|EDZ33302.1| DNA ligase [Campylobacter jejuni subsp. jejuni CG8421] Length = 647 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K E + +V +A + YY D+PL +D YD + L A +EQ + +D P Sbjct: 1 MKKEEYLEKVA----LANLWMRAYYEKDEPLASDEEYDALIRELRAFEEQNKDEISKDSP 56 Query: 114 WNTV 117 + Sbjct: 57 TQKI 60 >gi|307747505|gb|ADN90775.1| DNA ligase [Campylobacter jejuni subsp. jejuni M1] Length = 647 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K E + +V +A + YY D+PL +D YD + L A +EQ + +D P Sbjct: 1 MKKEEYLEKVA----LANLWMRAYYEKDEPLASDEEYDALIRELRAFEEQNKDEISKDSP 56 Query: 114 WNTV 117 + Sbjct: 57 TQKI 60 >gi|157414868|ref|YP_001482124.1| NAD-dependent DNA ligase LigA [Campylobacter jejuni subsp. jejuni 81116] gi|190359240|sp|A8FL10|DNLJ_CAMJ8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|157385832|gb|ABV52147.1| DNA ligase [Campylobacter jejuni subsp. jejuni 81116] gi|315931784|gb|EFV10739.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni 327] Length = 647 Score = 63.0 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K E + +V +A + YY D+PL +D YD + L A +EQ + +D P Sbjct: 1 MKKEEYLEKVA----LANLWMRAYYEKDEPLASDEEYDALIRELRAFEEQNKDEISKDSP 56 Query: 114 WNTV 117 + Sbjct: 57 TQKI 60 >gi|326774207|ref|ZP_08233489.1| DNA ligase, NAD-dependent [Actinomyces viscosus C505] gi|326636346|gb|EGE37250.1| DNA ligase, NAD-dependent [Actinomyces viscosus C505] Length = 818 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 2/62 (3%) Query: 59 AMIEVEYLVKIALHHQKWYY-RLDDPL-FTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 A LV+ + YY +D +D YD + L+ L+ P L P + Sbjct: 36 ARERWSELVRDIEAARDAYYNAIDAESPLSDADYDTLYRELEGLEAAHPLLARAGSPTRS 95 Query: 117 VG 118 VG Sbjct: 96 VG 97 >gi|330751993|emb|CBL80506.1| DNA ligase [uncultured Polaribacter sp.] Length = 665 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 31/60 (51%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L + +H YY LD+ +D +DR + L+ L+++ P F+ + P VG Sbjct: 3 VEEKIKELREQLNNHNYNYYVLDNATISDFDFDRTLKELEKLEKENPIFFNSNSPTQRVG 62 >gi|325119805|emb|CBZ55358.1| putative NAD-dependent DNA ligase OB-fold domain containing protein [Neospora caninum Liverpool] Length = 1981 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 28/68 (41%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 V+ L E LV+ + Y+ D +YD++ RL L+E P L Sbjct: 276 VSPLPDPSEKEEYHKLVETLRACDRAYHVGAHSPLPDAVYDQLKARLLHLEEVHPSLVTP 335 Query: 111 DHPWNTVG 118 + P + VG Sbjct: 336 ESPSSYVG 343 >gi|212550985|ref|YP_002309302.1| NAD-dependent DNA ligase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|254781545|sp|B6YRR9|DNLJ_AZOPC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|212549223|dbj|BAG83891.1| NAD-dependent DNA ligase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 663 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 30/60 (50%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L + + YY + P+ +D +D+ + L+ L+ Q+PE +D P +G Sbjct: 3 IKQKIDNLRQEIDNWNYRYYVIYQPIVSDFEFDKKLKELEKLEAQYPEYYDYYSPTQRIG 62 >gi|325846528|ref|ZP_08169443.1| DNA ligase (NAD+) [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481286|gb|EGC84327.1| DNA ligase (NAD+) [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 668 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 I+++ L+ YY LD+P+ +DG YD++ + L L+ + P VG Sbjct: 6 KIKIDELIDKINELNYHYYTLDEPMVSDGEYDKLYDELRELENS-TGYINAFSPTQRVG 63 >gi|254517673|ref|ZP_05129729.1| NAD-dependent DNA ligase LigA [Clostridium sp. 7_2_43FAA] gi|226911422|gb|EEH96623.1| NAD-dependent DNA ligase LigA [Clostridium sp. 7_2_43FAA] Length = 663 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E LV + YY LD+P +D YD+ + L L+E+ P VG Sbjct: 4 KQRIEELVNELNRYAYEYYSLDNPSVSDKDYDKKYDELKKLEEE-TNYVLPYSPTLRVG 61 >gi|329946006|ref|ZP_08293693.1| DNA ligase [Actinomyces sp. oral taxon 170 str. F0386] gi|328528454|gb|EGF55432.1| DNA ligase [Actinomyces sp. oral taxon 170 str. F0386] Length = 811 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 2/62 (3%) Query: 59 AMIEVEYLVKIALHHQKWYY--RLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 A LV+ + YY + +D YD + L+ L+ P L P + Sbjct: 27 ARERWGELVRDIEAARDAYYNAVDAESSLSDADYDVLYRELEDLEAAHPLLARAGSPTRS 86 Query: 117 VG 118 VG Sbjct: 87 VG 88 >gi|78187553|ref|YP_375596.1| DNA ligase (NAD+) [Chlorobium luteolum DSM 273] gi|123743616|sp|Q3B278|DNLJ_PELLD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|78167455|gb|ABB24553.1| DNA ligase (NAD+) [Chlorobium luteolum DSM 273] Length = 677 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 22/46 (47%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 H YY P +D +DR+ RL L+ + PEL D P VG Sbjct: 24 HNHLYYVEAKPEISDYDFDRLLLRLIELEREHPELVTPDSPTGRVG 69 >gi|222823679|ref|YP_002575253.1| DNA ligase, NAD-dependent [Campylobacter lari RM2100] gi|254781279|sp|B9KG17|DNLJ_CAMLR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|222538901|gb|ACM64002.1| DNA ligase, NAD-dependent [Campylobacter lari RM2100] Length = 651 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ E + +V+ L K + YY D+PL +D YD++ L + + + +D P Sbjct: 1 MTYQEYLEKVK-LAKE---WMRAYYEDDEPLASDEEYDKLIRELKEFEALYKDKISKDSP 56 Query: 114 WNTV 117 + Sbjct: 57 TQNI 60 >gi|312131728|ref|YP_003999068.1| DNA ligase, nad-dependent [Leadbetterella byssophila DSM 17132] gi|311908274|gb|ADQ18715.1| DNA ligase, NAD-dependent [Leadbetterella byssophila DSM 17132] Length = 680 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 25/61 (40%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++ L H+ YY +D +D + + L+ L++ PE D P V Sbjct: 2 DIKTRIQTLTDQINHYNDRYYLDAVSEISDFEFDTLLKELEELEKAHPEFRQPDSPTQRV 61 Query: 118 G 118 G Sbjct: 62 G 62 >gi|303234054|ref|ZP_07320703.1| DNA ligase (NAD+) [Finegoldia magna BVS033A4] gi|302494979|gb|EFL54736.1| DNA ligase (NAD+) [Finegoldia magna BVS033A4] Length = 662 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E ++YLV I + YY LDDPL D YD + + L L+++ + + P N + Sbjct: 2 EKQDRIKYLVDILNKYAYHYYTLDDPLIADSEYDVLYDELVNLEKE-TGIVLPNSPTNRI 60 Query: 118 G 118 G Sbjct: 61 G 61 >gi|169824266|ref|YP_001691877.1| NAD-dependent DNA ligase LigA [Finegoldia magna ATCC 29328] gi|254781333|sp|B0RZW0|DNLJ_FINM2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|167831071|dbj|BAG07987.1| NAD-dependent DNA ligase [Finegoldia magna ATCC 29328] Length = 662 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E ++YLV I + YY LDDPL D YD + + L L+++ + + P N + Sbjct: 2 EKQDRIKYLVDILNKYAYHYYTLDDPLIADSEYDVLYDELVNLEKE-TGIVLPNSPTNRI 60 Query: 118 G 118 G Sbjct: 61 G 61 >gi|302380539|ref|ZP_07269004.1| DNA ligase (NAD+) [Finegoldia magna ACS-171-V-Col3] gi|302311482|gb|EFK93498.1| DNA ligase (NAD+) [Finegoldia magna ACS-171-V-Col3] Length = 662 Score = 62.2 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E ++YLV I + YY LDDPL D YD + + L L+++ + + P N + Sbjct: 2 EKQDRMKYLVDILNKYAYHYYTLDDPLIADSEYDVLYDELVNLEKE-TGIVLPNSPTNRI 60 Query: 118 G 118 G Sbjct: 61 G 61 >gi|255526475|ref|ZP_05393386.1| DNA ligase, NAD-dependent [Clostridium carboxidivorans P7] gi|296184848|ref|ZP_06853259.1| DNA ligase, NAD-dependent [Clostridium carboxidivorans P7] gi|255509857|gb|EET86186.1| DNA ligase, NAD-dependent [Clostridium carboxidivorans P7] gi|296050630|gb|EFG90053.1| DNA ligase, NAD-dependent [Clostridium carboxidivorans P7] Length = 669 Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++E LV+ + + YY LD+P +D YD + L L+++ + P VG Sbjct: 8 KEQIEKLVEELNKYAQEYYLLDNPSVSDKEYDLRYDELLKLEKE-TGIILPYSPTQRVG 65 >gi|254994698|ref|ZP_05276888.1| DNA ligase [Anaplasma marginale str. Mississippi] Length = 624 Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 +A + L HH Y+ LD P TD YD + + L ++FP++ D + Sbjct: 3 EQARRRLAGLNAKLRHHDVLYHGLDAPEVTDHQYDLLVQEKKRLLDEFPDISQYDDYADV 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|193216704|ref|YP_001999946.1| DNA ligase [Mycoplasma arthritidis 158L3-1] gi|254781372|sp|B3PMJ0|DNLJ_MYCA5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|193002027|gb|ACF07242.1| DNA ligase [Mycoplasma arthritidis 158L3-1] Length = 665 Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 4/67 (5%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD----E 110 K + EV L YY LD PL D +YDR +L L+EQ+ F Sbjct: 3 EKEKIRNEVFELQAKINEWDNAYYNLDAPLVEDAIYDREILKLKKLEEQYSSYFSFEELA 62 Query: 111 DHPWNTV 117 + P + Sbjct: 63 NSPTQKI 69 >gi|56416472|ref|YP_153546.1| DNA ligase [Anaplasma marginale str. St. Maries] gi|81359291|sp|Q5PBN8|DNLJ_ANAMM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|56387704|gb|AAV86291.1| DNA ligase [Anaplasma marginale str. St. Maries] Length = 673 Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 +A + L HH Y+ LD P TD YD + + L ++FP++ D + Sbjct: 3 EQARRRLAGLNAKLRHHDVLYHGLDAPEVTDHQYDLLVQEKKRLLDEFPDISQYDDYADV 62 Query: 117 VG 118 VG Sbjct: 63 VG 64 >gi|283954134|ref|ZP_06371659.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni 414] gi|283794413|gb|EFC33157.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni 414] Length = 647 Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K E + +V +A + YY D+PL +D YD + L A +EQ + +D P Sbjct: 1 MKKEEYLEKVA----LANSWMRAYYEKDEPLASDEEYDALIRELRAFEEQNKDEILKDSP 56 Query: 114 WNTV 117 + Sbjct: 57 TQKI 60 >gi|6179416|emb|CAB59902.1| DNA ligase [Campylobacter jejuni] Length = 245 Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 4/64 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++K E + +V +A + YY D+PL +D YD + L A +EQ + +D P Sbjct: 1 MTKKEYLEKVA----LAASWMRAYYEKDEPLASDEEYDALIRELRAFEEQNKDEISKDSP 56 Query: 114 WNTV 117 + Sbjct: 57 TQKI 60 >gi|168183572|ref|ZP_02618236.1| DNA ligase (NAD(+)) [Clostridium botulinum Bf] gi|237796711|ref|YP_002864263.1| NAD-dependent DNA ligase LigA [Clostridium botulinum Ba4 str. 657] gi|254781290|sp|C3KUA1|DNLJ_CLOB6 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|182673387|gb|EDT85348.1| DNA ligase (NAD(+)) [Clostridium botulinum Bf] gi|229263356|gb|ACQ54389.1| DNA ligase, NAD-dependent [Clostridium botulinum Ba4 str. 657] Length = 664 Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ LV+ + YY LD+P +D YD + L L+++ ++ P VG Sbjct: 6 EKMKKLVEELNQYAYEYYVLDNPSISDKEYDLKYDELVILEKE-TQVTLPYSPTQRVG 62 >gi|189184847|ref|YP_001938632.1| NAD-dependent DNA ligase LigA [Orientia tsutsugamushi str. Ikeda] gi|254781383|sp|B3CVK1|DNLJ_ORITI RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|189181618|dbj|BAG41398.1| DNA ligase [Orientia tsutsugamushi str. Ikeda] Length = 699 Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 31/70 (44%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 + L+ A V++L + + YY ++PL TD YD + + + +FP L Sbjct: 10 NIEQLTSDHAKKIVDFLALELQKYDQAYYSDNNPLVTDAQYDVLKNLNNKIVAKFPHLAL 69 Query: 110 EDHPWNTVGY 119 + VG+ Sbjct: 70 VNDHSKKVGF 79 >gi|148284934|ref|YP_001249024.1| NAD-dependent DNA ligase LigA [Orientia tsutsugamushi str. Boryong] gi|166216222|sp|A5CEY0|DNLJ_ORITB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|146740373|emb|CAM80812.1| NAD-dependent DNA ligase [Orientia tsutsugamushi str. Boryong] Length = 698 Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 31/70 (44%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 + L+ A V++L + + YY ++PL TD YD + + + +FP L Sbjct: 10 NIEQLTSDHAKKIVDFLALELQKYDQAYYSDNNPLVTDAQYDVLKNLNNKIVAKFPHLAL 69 Query: 110 EDHPWNTVGY 119 + VG+ Sbjct: 70 VNDHSKKVGF 79 >gi|150015242|ref|YP_001307496.1| NAD-dependent DNA ligase LigA [Clostridium beijerinckii NCIMB 8052] gi|190359245|sp|A6LQB0|DNLJ_CLOB8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|149901707|gb|ABR32540.1| DNA ligase, NAD-dependent [Clostridium beijerinckii NCIMB 8052] Length = 663 Score = 61.4 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + ++ LV+ + YY LD P +D YD L L+ + E P VG Sbjct: 4 IERIKELVEKLNRYSYEYYSLDSPSVSDKDYDEKYYELQELERE-TEYVLPYSPTLRVG 61 >gi|269119219|ref|YP_003307396.1| DNA ligase, NAD-dependent [Sebaldella termitidis ATCC 33386] gi|268613097|gb|ACZ07465.1| DNA ligase, NAD-dependent [Sebaldella termitidis ATCC 33386] Length = 669 Score = 61.4 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 32/65 (49%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + E L + + + YY ++ L TD YD + + ++++++++PEL D Sbjct: 1 MEQTGIKKRYEELKDLIRKYNEHYYEKNESLVTDYEYDMLLKEMESIEKEYPELKDTVSV 60 Query: 114 WNTVG 118 VG Sbjct: 61 TEKVG 65 >gi|269123713|ref|YP_003306290.1| DNA ligase, NAD-dependent [Streptobacillus moniliformis DSM 12112] gi|268315039|gb|ACZ01413.1| DNA ligase, NAD-dependent [Streptobacillus moniliformis DSM 12112] Length = 675 Score = 61.4 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 29/49 (59%) Query: 70 ALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + YY LD+ L TD YD + ++++ L+++FPEL ++ P +G Sbjct: 23 IEIYNHHYYNLDESLITDREYDALLKKIELLEKEFPELKLKNSPTEIIG 71 >gi|194246669|ref|YP_002004308.1| NAD-dependent DNA ligase [Candidatus Phytoplasma mali] gi|254781388|sp|B3QZS5|DNLJ_PHYMT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|193807026|emb|CAP18462.1| NAD-dependent DNA ligase [Candidatus Phytoplasma mali] Length = 659 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 25/62 (40%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E + +L+ YY L++ D YD + L L+ ++PE + P Sbjct: 2 EEIKKRIIFLIDKINKTNYEYYTLNESSLNDQQYDALFRELLYLESKYPEYNYKFSPTTK 61 Query: 117 VG 118 +G Sbjct: 62 IG 63 >gi|154498647|ref|ZP_02037025.1| hypothetical protein BACCAP_02637 [Bacteroides capillosus ATCC 29799] gi|150272386|gb|EDM99580.1| hypothetical protein BACCAP_02637 [Bacteroides capillosus ATCC 29799] Length = 656 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + + + L++ + YY+ D P+ D YDR+ + L AL+ + P V Sbjct: 2 QNLERMRELIQTIKEADEAYYKYDAPIMADLDYDRLYDELAALERE-TGTILSSSPTQRV 60 >gi|257484999|ref|ZP_05639040.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 181 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 15/29 (51%) Query: 90 YDRVSERLDALQEQFPELFDEDHPWNTVG 118 YDR+ L AL+ + P L D P VG Sbjct: 1 YDRLFHELKALEAENPHLVTPDSPTQRVG 29 >gi|58584805|ref|YP_198378.1| NAD-dependent DNA ligase, Lig [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|75497767|sp|Q5GS88|DNLJ_WOLTR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|58419121|gb|AAW71136.1| NAD-dependent DNA ligase, Lig [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 683 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP-ELFDED 111 + + E L +H Y++ P D YD++ ++L ++ Q P +D Sbjct: 3 DLEKMIEEFTKLRDQISYHDVLYHQKSKPEIADAEYDKLKQKLVEMEGQLPGACVTQD 60 >gi|256832938|ref|YP_003161665.1| DNA ligase, NAD-dependent [Jonesia denitrificans DSM 20603] gi|256686469|gb|ACV09362.1| DNA ligase, NAD-dependent [Jonesia denitrificans DSM 20603] Length = 798 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 7/62 (11%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF---PELFDEDHPWNT 116 + E L ++ +Q YY + D YD + L A++EQ P+ P Sbjct: 54 QEQWERLARLIQRYQFEYYIQGESSVPDADYDALLAELVAVEEQLGGAPQ----GSPTQR 109 Query: 117 VG 118 VG Sbjct: 110 VG 111 >gi|262341099|ref|YP_003283954.1| DNA ligase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272436|gb|ACY40344.1| DNA ligase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 681 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 25/54 (46%) Query: 65 YLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L K + YY D +D +D+ E L L++++PE +D P +G Sbjct: 27 QLRKELSKYNYQYYNFDTSDISDFHFDKKLEELFFLEKKYPEFYDPTSPTIKIG 80 >gi|227485017|ref|ZP_03915333.1| DNA ligase (NAD(+)) [Anaerococcus lactolyticus ATCC 51172] gi|227237014|gb|EEI87029.1| DNA ligase (NAD(+)) [Anaerococcus lactolyticus ATCC 51172] Length = 667 Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E++ +++ YY LD PL +DG YD++ +L LQ+ E+ P N VG Sbjct: 6 ELKKIIERINELDYHYYTLDKPLVSDGEYDKLYNQLIKLQKNL-AYVPENSPTNRVG 61 >gi|311747945|ref|ZP_07721730.1| DNA ligase, NAD-dependent [Algoriphagus sp. PR1] gi|126574918|gb|EAZ79276.1| DNA ligase, NAD-dependent [Algoriphagus sp. PR1] Length = 791 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 21/39 (53%) Query: 80 LDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 D + +D +D++ E L L+ +FP+L D P VG Sbjct: 2 EDQAVISDFEFDKLLEELVQLETEFPDLLQPDSPSQRVG 40 >gi|78777542|ref|YP_393857.1| NAD-dependent DNA ligase LigA [Sulfurimonas denitrificans DSM 1251] gi|123768611|sp|Q30QV9|DNLJ_SULDN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|78498082|gb|ABB44622.1| DNA ligase (NAD+) [Sulfurimonas denitrificans DSM 1251] Length = 652 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K + + VE L+ + +H YY LDD + TD +YD++ + +E E ++ P Sbjct: 1 MKKEQYIKAVE-LLNLYSYH---YYVLDDAITTDEVYDKLYHEVLEYEESHKEDILKNSP 56 Query: 114 WNTVG 118 VG Sbjct: 57 TQRVG 61 >gi|27904570|ref|NP_777696.1| DNA ligase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|32129495|sp|Q89B02|DNLJ_BUCBP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|27903967|gb|AAO26801.1| DNA ligase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 672 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 65 YLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD-EDHPWNTVG 118 L +H Y+ L+ P +D YD + L L+++ +D P +VG Sbjct: 10 KLQDEIRYHAYLYHTLNSPKISDEKYDFLVIELQRLEKKCKYSVRFKDSPTQSVG 64 >gi|187776813|ref|ZP_02993286.1| hypothetical protein CLOSPO_00329 [Clostridium sporogenes ATCC 15579] gi|187775472|gb|EDU39274.1| hypothetical protein CLOSPO_00329 [Clostridium sporogenes ATCC 15579] Length = 664 Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ LV+ H YY LD+ +D YD + L L+++ ++ P VG Sbjct: 6 EKMKELVEELNQHAYEYYVLDNSSISDKEYDLKYDELVVLEKE-TKVTLPYSPTQRVG 62 >gi|296393986|ref|YP_003658870.1| DNA ligase, NAD-dependent [Segniliparus rotundus DSM 44985] gi|296181133|gb|ADG98039.1| DNA ligase, NAD-dependent [Segniliparus rotundus DSM 44985] Length = 690 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 3/74 (4%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + K K L + L HQ YY LD P TD +D + L L+E+ Sbjct: 1 MSKGKAPARLDPAQ---RWRALADEIREHQFRYYVLDSPTVTDAQFDVLLRELQELEEEH 57 Query: 105 PELFDEDHPWNTVG 118 PEL D P VG Sbjct: 58 PELASADSPTKLVG 71 >gi|254374741|ref|ZP_04990222.1| hypothetical protein FTDG_00916 [Francisella novicida GA99-3548] gi|151572460|gb|EDN38114.1| hypothetical protein FTDG_00916 [Francisella novicida GA99-3548] Length = 678 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+K E ++ L Y+ LD P+ +D YD++ L L P+ + Sbjct: 14 LAKAELKAYIDKLADYLSQQSYLYHTLDKPIISDSDYDKLFRLLQDLVNDNPQFKPINSV 73 Query: 114 WNTVG 118 + VG Sbjct: 74 LDRVG 78 >gi|208779663|ref|ZP_03247008.1| DNA ligase, NAD-dependent [Francisella novicida FTG] gi|208744624|gb|EDZ90923.1| DNA ligase, NAD-dependent [Francisella novicida FTG] Length = 678 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+K E ++ L Y+ LD P+ +D YD++ L L P+ + Sbjct: 14 LAKAELKAYIDKLADYLSQQSYLYHTLDKPIISDSDYDKLFRLLQDLVNDNPQFKPINSV 73 Query: 114 WNTVG 118 + VG Sbjct: 74 LDRVG 78 >gi|153952455|ref|YP_001398174.1| NAD-dependent DNA ligase LigA [Campylobacter jejuni subsp. doylei 269.97] gi|190359241|sp|A7H3U4|DNLJ_CAMJD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|152939901|gb|ABS44642.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. doylei 269.97] Length = 647 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K E + +V +A + YY D+PL +D YD + L +EQ + +D P Sbjct: 1 MKKEEYLEKVA----LANLWMRAYYEKDEPLASDEEYDALIRELRVFEEQNKDEVSKDSP 56 Query: 114 WNTV 117 + Sbjct: 57 TQKI 60 >gi|118497929|ref|YP_898979.1| DNA ligase [Francisella tularensis subsp. novicida U112] gi|194323151|ref|ZP_03056935.1| DNA ligase, NAD-dependent [Francisella tularensis subsp. novicida FTE] gi|166215758|sp|A0Q7L0|DNLJ_FRATN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|118423835|gb|ABK90225.1| DNA ligase [Francisella novicida U112] gi|194322515|gb|EDX19995.1| DNA ligase, NAD-dependent [Francisella tularensis subsp. novicida FTE] Length = 678 Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+K E ++ L Y+ LD P+ +D YD++ L L P+ + Sbjct: 14 LAKAELKAYIDKLADYLSQQSYLYHTLDKPIISDSDYDKLFRLLQDLVNDNPQFKPINSV 73 Query: 114 WNTVG 118 + VG Sbjct: 74 LDRVG 78 >gi|254373281|ref|ZP_04988769.1| hypothetical protein FTCG_00864 [Francisella tularensis subsp. novicida GA99-3549] gi|151571007|gb|EDN36661.1| hypothetical protein FTCG_00864 [Francisella novicida GA99-3549] Length = 678 Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+K E ++ L Y+ LD P+ +D YD++ L L P+ + Sbjct: 14 LAKAELKAYIDKLADYLSQQSYLYHTLDKPIISDSDYDKLFRLLQDLVNDNPQFKPINSV 73 Query: 114 WNTVG 118 + VG Sbjct: 74 LDRVG 78 >gi|115314545|ref|YP_763268.1| DNA ligase [Francisella tularensis subsp. holarctica OSU18] gi|122325430|sp|Q0BMQ3|DNLJ_FRATO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|115129444|gb|ABI82631.1| DNA ligase (NAD(+)) [Francisella tularensis subsp. holarctica OSU18] Length = 678 Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+K E ++ L Y+ LD P+ +D YD++ L L P+ + Sbjct: 14 LAKAELKAYIDKLADYLSQQSYLYHTLDKPIISDSDYDKLFRLLQDLVNDNPQFKPINSV 73 Query: 114 WNTVG 118 + VG Sbjct: 74 LDRVG 78 >gi|213621265|ref|ZP_03374048.1| NAD-dependent DNA ligase LigA [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 50 Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 21/47 (44%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 ++ L HH+ Y+ +D P D YDR+ L L+ Q P Sbjct: 4 IEQQLTELRTTLRHHEYLYHVMDAPEILDAEYDRLMRELRELEAQRP 50 >gi|262037707|ref|ZP_06011149.1| DNA ligase (NAD(+)) [Leptotrichia goodfellowii F0264] gi|261748179|gb|EEY35576.1| DNA ligase (NAD(+)) [Leptotrichia goodfellowii F0264] Length = 697 Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 27/48 (56%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 E + L + + ++YY D PL +D YD + ++L ++E+ PEL Sbjct: 16 EEYKKLREDIERYNRYYYDEDRPLISDKEYDDLIKKLQKIEEKNPELK 63 >gi|254368889|ref|ZP_04984902.1| DNA ligase [Francisella tularensis subsp. holarctica FSC022] gi|157121810|gb|EDO65980.1| DNA ligase [Francisella tularensis subsp. holarctica FSC022] Length = 678 Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+K E ++ L Y+ LD P+ +D YD++ L L P+ + Sbjct: 14 LAKAELKAYIDKLADYLSQQSYLYHTLDKPIISDSDYDKLFRLLQDLVNDNPQFKPINSV 73 Query: 114 WNTVG 118 + VG Sbjct: 74 LDRVG 78 >gi|156502078|ref|YP_001428143.1| DNA ligase [Francisella tularensis subsp. holarctica FTNF002-00] gi|290954221|ref|ZP_06558842.1| DNA ligase [Francisella tularensis subsp. holarctica URFT1] gi|295312341|ref|ZP_06803126.1| DNA ligase [Francisella tularensis subsp. holarctica URFT1] gi|166214810|sp|A7NB34|DNLJ_FRATF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|156252681|gb|ABU61187.1| DNA ligase, NAD-dependent [Francisella tularensis subsp. holarctica FTNF002-00] Length = 678 Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+K E ++ L Y+ LD P+ +D YD++ L L P+ + Sbjct: 14 LAKAELKAYIDKLADYLSQQSYLYHTLDKPIISDSDYDKLFRLLQDLVNDNPQFKPINSV 73 Query: 114 WNTVG 118 + VG Sbjct: 74 LDRVG 78 >gi|32396677|gb|AAP49295.1| NAD-dependent DNA ligase [Meiothermus ruber] Length = 99 Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 16/32 (50%), Positives = 19/32 (59%) Query: 87 DGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 D YDR+ + L AL+E PEL D P TVG Sbjct: 1 DAEYDRLLQELRALEEAHPELIIPDSPTQTVG 32 >gi|57238218|ref|YP_178701.1| NAD-dependent DNA ligase LigA [Campylobacter jejuni RM1221] gi|81353856|sp|Q5HVI4|DNLJ_CAMJR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|57167022|gb|AAW35801.1| DNA ligase, NAD-dependent [Campylobacter jejuni RM1221] gi|315058000|gb|ADT72329.1| DNA ligase [Campylobacter jejuni subsp. jejuni S3] Length = 647 Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K E + +V +A + YY D+PL +D YD + L +EQ + +D P Sbjct: 1 MKKEEYLEKVA----LANLWMRAYYEKDEPLASDEEYDALIRELRVFEEQNKDEISKDSP 56 Query: 114 WNTV 117 + Sbjct: 57 TQKI 60 >gi|89256066|ref|YP_513428.1| DNA ligase [Francisella tularensis subsp. holarctica LVS] gi|167009870|ref|ZP_02274801.1| DNA ligase [Francisella tularensis subsp. holarctica FSC200] gi|254367402|ref|ZP_04983428.1| DNA ligase [Francisella tularensis subsp. holarctica 257] gi|123401612|sp|Q2A4C4|DNLJ_FRATH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|89143897|emb|CAJ79115.1| DNA ligase [Francisella tularensis subsp. holarctica LVS] gi|134253218|gb|EBA52312.1| DNA ligase [Francisella tularensis subsp. holarctica 257] Length = 678 Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+K E ++ L Y+ LD P+ +D YD++ L L P+ + Sbjct: 14 LAKAELKAYIDKLADYLSQQSYLYHTLDKPIISDSDYDKLFRLLQDLVNDNPQFKPINSV 73 Query: 114 WNTVG 118 + VG Sbjct: 74 LDRVG 78 >gi|56708436|ref|YP_170332.1| DNA ligase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670907|ref|YP_667464.1| DNA ligase [Francisella tularensis subsp. tularensis FSC198] gi|134301572|ref|YP_001121540.1| DNA ligase [Francisella tularensis subsp. tularensis WY96-3418] gi|187931418|ref|YP_001891402.1| DNA ligase, NAD-dependent [Francisella tularensis subsp. mediasiatica FSC147] gi|224457588|ref|ZP_03666061.1| DNA ligase, NAD-dependent [Francisella tularensis subsp. tularensis MA00-2987] gi|254875281|ref|ZP_05247991.1| DNA ligase [Francisella tularensis subsp. tularensis MA00-2987] gi|81597232|sp|Q5NF60|DNLJ_FRATT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|123063401|sp|Q14GL3|DNLJ_FRAT1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|166215759|sp|A4IWW8|DNLJ_FRATW RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781335|sp|B2SFT1|DNLJ_FRATM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|56604928|emb|CAG46020.1| DNA ligase [Francisella tularensis subsp. tularensis SCHU S4] gi|110321240|emb|CAL09403.1| DNA ligase [Francisella tularensis subsp. tularensis FSC198] gi|134049349|gb|ABO46420.1| DNA ligase, NAD-dependent [Francisella tularensis subsp. tularensis WY96-3418] gi|187712327|gb|ACD30624.1| DNA ligase, NAD-dependent [Francisella tularensis subsp. mediasiatica FSC147] gi|254841280|gb|EET19716.1| DNA ligase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159628|gb|ADA79019.1| DNA ligase, NAD-dependent [Francisella tularensis subsp. tularensis NE061598] Length = 678 Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+K E ++ L Y+ LD P+ +D YD++ L L P+ + Sbjct: 14 LAKAELKAYIDKLADYLSQQSYLYHTLDKPIISDSDYDKLFRLLQDLVNDNPQFKPINSV 73 Query: 114 WNTVG 118 + VG Sbjct: 74 LDRVG 78 >gi|86149767|ref|ZP_01067996.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597007|ref|ZP_01100243.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni 84-25] gi|218562237|ref|YP_002344016.1| NAD-dependent DNA ligase LigA [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|122952953|sp|Q0PAT1|DNLJ_CAMJE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|85839585|gb|EAQ56845.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190696|gb|EAQ94669.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni 84-25] gi|112359943|emb|CAL34732.1| DNA ligase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925847|gb|ADC28199.1| NAD-dependent DNA ligase LigA [Campylobacter jejuni subsp. jejuni IA3902] gi|315927323|gb|EFV06667.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930607|gb|EFV09637.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni 305] Length = 647 Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K E + +V +A + YY D+PL +D YD + L +EQ + +D P Sbjct: 1 MKKEEYLEKVA----LANLWMRAYYEKDEPLASDEEYDALIRELRVFEEQNKDEISKDSP 56 Query: 114 WNTV 117 + Sbjct: 57 TQKI 60 >gi|42520616|ref|NP_966531.1| DNA ligase, NAD-dependent [Wolbachia endosymbiont of Drosophila melanogaster] gi|81652444|sp|Q73H01|DNLJ_WOLPM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|42410355|gb|AAS14465.1| DNA ligase, NAD-dependent [Wolbachia endosymbiont of Drosophila melanogaster] Length = 662 Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 6/60 (10%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF-DEDH 112 ++ E M E L +H Y++ + P +D YD + ++L ++ PE++ +D Sbjct: 1 MTNLEKMRE--KLQDQINYHNVLYHQKNKPEISDAEYDELKKKLAEIE---PEIYATQDS 55 >gi|283955998|ref|ZP_06373487.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni 1336] gi|283792474|gb|EFC31254.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni 1336] Length = 647 Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K E + +V +A + YY D+PL +D YD + L +EQ + +D P Sbjct: 1 MKKEEYLEKVA----LANLWMRAYYEKDEPLASDEEYDALIRELRVFEEQNKDEISKDSP 56 Query: 114 WNTV 117 + Sbjct: 57 TQKI 60 >gi|126737638|ref|ZP_01753368.1| DNA ligase, NAD-dependent [Roseobacter sp. SK209-2-6] gi|126721031|gb|EBA17735.1| DNA ligase, NAD-dependent [Roseobacter sp. SK209-2-6] Length = 749 Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 K ++ LS+ EA E+ L + + ++ D +DG YDR RL L + FP+L Sbjct: 3 KPISDLSENEAQEELNELKLLIWSADRLHHTHDISEISDGAYDREKRRLKELVDTFPKLR 62 >gi|190570889|ref|YP_001975247.1| DNA ligase, NAD-dependent [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019404|ref|ZP_03335210.1| DNA ligase, NAD-dependent [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|254782310|sp|B3CPS1|DNLJ_WOLPP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|190357161|emb|CAQ54574.1| DNA ligase, NAD-dependent [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212994826|gb|EEB55468.1| DNA ligase, NAD-dependent [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 651 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE-LFDEDH 112 ++ E M E L +H YY+ P +D YD + ++L A++ PE +D Sbjct: 1 MTDLEKMRE--KLQNQINYHNILYYQKSKPEISDAEYDELKKKLAAIE---PEAYATQDS 55 >gi|86153540|ref|ZP_01071744.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843266|gb|EAQ60477.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni HB93-13] Length = 647 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K E + +V +A + YY D+PL +D YD + L +EQ + +D P Sbjct: 1 MKKEEYLEKVA----LANLWMRAYYEKDEPLASDEEYDALIRELSVFEEQNKDEISKDSP 56 Query: 114 WNTV 117 + Sbjct: 57 TQKI 60 >gi|148925946|ref|ZP_01809633.1| DNA ligase [Campylobacter jejuni subsp. jejuni CG8486] gi|145844932|gb|EDK22036.1| DNA ligase [Campylobacter jejuni subsp. jejuni CG8486] Length = 647 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K E + +V +A + YY D+PL +D YD + L +EQ + +D P Sbjct: 1 MKKEEYLEKVA----LANLWMRAYYEKDEPLASDEEYDALIRELSVFEEQNKDEISKDSP 56 Query: 114 WNTV 117 + Sbjct: 57 TQKI 60 >gi|332184463|gb|AEE26717.1| DNA ligase [Francisella cf. novicida 3523] Length = 678 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 28/65 (43%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 L+K E ++ L Y+ LD P+ +D YD++ L L + P+ + Sbjct: 14 LAKPELKAYIDKLADYLSQQSYLYHTLDKPIISDSDYDKLFRLLQDLVDDNPQFKPTNSV 73 Query: 114 WNTVG 118 + VG Sbjct: 74 LDRVG 78 >gi|282882908|ref|ZP_06291513.1| DNA ligase (NAD(+)) [Peptoniphilus lacrimalis 315-B] gi|281297319|gb|EFA89810.1| DNA ligase (NAD(+)) [Peptoniphilus lacrimalis 315-B] Length = 664 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A +++ LVK + +YY LD L D +YDR+ + L L+++ + D P V Sbjct: 2 QASEKMQKLVKELNRYGYYYYTLDKSLIDDKVYDRMYDELVNLEKE-ENIVLADSPTTRV 60 Query: 118 G 118 G Sbjct: 61 G 61 >gi|154174322|ref|YP_001408016.1| NAD-dependent DNA ligase LigA [Campylobacter curvus 525.92] gi|190359239|sp|A7GXS4|DNLJ_CAMC5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|112803310|gb|EAU00654.1| DNA ligase, NAD-dependent [Campylobacter curvus 525.92] Length = 654 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 23/61 (37%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 ++ E V K YY D P+ +D YD + + A ++ P P + Sbjct: 8 DSKESYENAVATLNAWAKAYYDDDAPIASDEEYDALYHEVLAYEQVNPAQKSLFSPTTRI 67 Query: 118 G 118 G Sbjct: 68 G 68 >gi|153956080|ref|YP_001396845.1| DNA ligase [Clostridium kluyveri DSM 555] gi|146348938|gb|EDK35474.1| DNA ligase [Clostridium kluyveri DSM 555] Length = 60 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 5/61 (8%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + +VE L K+ YY D+ TD YD++S +L L++++PE +D P V Sbjct: 2 DIKNKVEGLSKLIE-----YYNKDESEITDHEYDKLSLKLRKLEKEYPEYARKDSPTQKV 56 Query: 118 G 118 G Sbjct: 57 G 57 >gi|251777669|ref|ZP_04820589.1| DNA ligase, NAD-dependent [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243081984|gb|EES47874.1| DNA ligase, NAD-dependent [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 667 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + ++ LV+I + YY LD+P +D YD+ + L L+++ P +G Sbjct: 5 IERIKELVEILNKYSYDYYVLDNPSVSDKDYDKKYDELKLLEKE-TGFVLPYSPTLRIG 62 >gi|331270357|ref|YP_004396849.1| DNA ligase [Clostridium botulinum BKT015925] gi|329126907|gb|AEB76852.1| DNA ligase, NAD-dependent [Clostridium botulinum BKT015925] Length = 663 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV YY LD+P D YD+ + L L++Q + P VG Sbjct: 5 KQQIYKLVDELNKLAYEYYVLDNPSVADKDYDKKYDELVQLEKQ-TGMMLPYSPTQRVG 62 >gi|223039682|ref|ZP_03609968.1| DNA ligase, NAD-dependent [Campylobacter rectus RM3267] gi|222879065|gb|EEF14160.1| DNA ligase, NAD-dependent [Campylobacter rectus RM3267] Length = 647 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 20/59 (33%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E V K YY D P+ TD YD + ++ + P P VG Sbjct: 3 KKEYLEAVDTLNAWAKAYYTDDAPIATDEEYDELYHKVLEFERANPGDISMFSPTKRVG 61 >gi|300813320|ref|ZP_07093675.1| DNA ligase (NAD(+)) [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512591|gb|EFK39736.1| DNA ligase (NAD(+)) [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 664 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A +++ LVK + +YY LD L D +YDR+ + L L+++ + D P V Sbjct: 2 QASEKMQKLVKELNRYGYYYYTLDKSLIDDKVYDRIYDELVNLEKE-ENIVLADSPTTRV 60 Query: 118 G 118 G Sbjct: 61 G 61 >gi|33519955|ref|NP_878787.1| DNA ligase [Candidatus Blochmannia floridanus] gi|81666906|sp|Q7VRU2|DNLJ_BLOFL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|33504301|emb|CAD83193.1| DNA ligase [Candidatus Blochmannia floridanus] Length = 594 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 25/59 (42%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 V+ L + + + YY + +D YD + E L L+ ++P L + ++ Sbjct: 4 IKNRVQILRERLNYLEYLYYVKSESKVSDEEYDILLEELRQLEFKYPYLITKSSSTQSI 62 >gi|72080605|ref|YP_287663.1| DNA ligase [Mycoplasma hyopneumoniae 7448] Length = 693 Score = 59.5 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 4/66 (6%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED----H 112 + ++ L + YY+L +PL D +YD+ L+ L+ + LF + Sbjct: 6 SQIRAKIIELREKIEKWNHHYYQLQNPLVDDLVYDKTLRELEKLERENFFLFSLEELNQS 65 Query: 113 PWNTVG 118 P VG Sbjct: 66 PSQKVG 71 >gi|71893614|ref|YP_279060.1| DNA ligase [Mycoplasma hyopneumoniae J] Length = 693 Score = 59.5 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 4/66 (6%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED----H 112 + ++ L + YY+L +PL D +YD+ L+ L+ + LF + Sbjct: 6 SQIRAKIIELREKIEKWNHHYYQLQNPLVDDLVYDKTLRELEKLERENFFLFSLEELNQS 65 Query: 113 PWNTVG 118 P VG Sbjct: 66 PSQKVG 71 >gi|166215831|sp|Q4AA72|DNLJ_MYCHJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|144227540|gb|AAZ44349.2| DNA ligase [Mycoplasma hyopneumoniae J] Length = 692 Score = 59.5 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 4/66 (6%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED----H 112 + ++ L + YY+L +PL D +YD+ L+ L+ + LF + Sbjct: 5 SQIRAKIIELREKIEKWNHHYYQLQNPLVDDLVYDKTLRELEKLERENFFLFSLEELNQS 64 Query: 113 PWNTVG 118 P VG Sbjct: 65 PSQKVG 70 >gi|166215830|sp|Q4A899|DNLJ_MYCH7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|144575353|gb|AAZ53640.2| DNA ligase [Mycoplasma hyopneumoniae 7448] Length = 692 Score = 59.5 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 4/66 (6%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED----H 112 + ++ L + YY+L +PL D +YD+ L+ L+ + LF + Sbjct: 5 SQIRAKIIELREKIEKWNHHYYQLQNPLVDDLVYDKTLRELEKLERENFFLFSLEELNQS 64 Query: 113 PWNTVG 118 P VG Sbjct: 65 PSQKVG 70 >gi|187932891|ref|YP_001884644.1| NAD-dependent DNA ligase LigA [Clostridium botulinum B str. Eklund 17B] gi|254781292|sp|B2TIZ7|DNLJ_CLOBB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|187721044|gb|ACD22265.1| DNA ligase, NAD-dependent [Clostridium botulinum B str. Eklund 17B] Length = 667 Score = 59.5 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + ++ LV+I + YY LD+P +D YD+ + L L+++ P +G Sbjct: 5 IERIKELVEILNKYSYDYYVLDNPSVSDKDYDKEYDELKLLEKE-TGFVLPYSPTLRIG 62 >gi|54020343|ref|YP_115627.1| DNA ligase [Mycoplasma hyopneumoniae 232] gi|81378764|sp|Q601T8|DNLJ_MYCH2 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|53987516|gb|AAV27717.1| DNA ligase [Mycoplasma hyopneumoniae 232] Length = 692 Score = 59.5 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 4/66 (6%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED----H 112 + ++ L + YY+L +PL D +YD+ L+ L+ + LF + Sbjct: 5 SQIRAKIIELREKIEKWNHHYYQLQNPLVDDLVYDKTLRELEKLERENFFLFSLEELNQS 64 Query: 113 PWNTVG 118 P VG Sbjct: 65 PSQKVG 70 >gi|32396687|gb|AAP49299.1| NAD-dependent DNA ligase [Bacillus circulans] Length = 108 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 14/32 (43%), Positives = 18/32 (56%) Query: 87 DGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 D YD + L AL+EQ+PE +D P VG Sbjct: 1 DAEYDLFMQELIALEEQYPEFKTKDSPSQRVG 32 >gi|254458916|ref|ZP_05072339.1| DNA ligase, NAD-dependent [Campylobacterales bacterium GD 1] gi|207084187|gb|EDZ61476.1| DNA ligase, NAD-dependent [Campylobacterales bacterium GD 1] Length = 653 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 4/65 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++ + VE L + HH YY LDDP+ TD +YD++ + +E P Sbjct: 1 MNLEDYKKAVEQL-NLYSHH---YYVLDDPITTDEVYDKLYHEVVRFEENNKNAVLYSSP 56 Query: 114 WNTVG 118 VG Sbjct: 57 SQRVG 61 >gi|188587790|ref|YP_001919828.1| NAD-dependent DNA ligase LigA [Clostridium botulinum E3 str. Alaska E43] gi|254781291|sp|B2UZ23|DNLJ_CLOBA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|188498071|gb|ACD51207.1| DNA ligase, NAD-dependent [Clostridium botulinum E3 str. Alaska E43] Length = 667 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + ++ LV+I + YY LD+P +D YD+ + L L+++ + P +G Sbjct: 5 IERIKELVEILNKYSYDYYVLDNPSVSDKDYDKKYDELKLLEKE-TGVVLPYSPTLRIG 62 >gi|154502207|ref|ZP_02039267.1| hypothetical protein RUMGNA_00017 [Ruminococcus gnavus ATCC 29149] gi|153797086|gb|EDN79506.1| hypothetical protein RUMGNA_00017 [Ruminococcus gnavus ATCC 29149] Length = 663 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ LV+ ++ YY +D YDR+ + L L+ + + + P +VGY Sbjct: 18 KRIKELVEQLNEYRDAYYNEARSDVSDAEYDRLFDELSELENE-TGVVYTNSPTQSVGY 75 >gi|283769205|ref|ZP_06342109.1| NAD-dependent DNA ligase domain protein [Bulleidia extructa W1219] gi|283104181|gb|EFC05560.1| NAD-dependent DNA ligase domain protein [Bulleidia extructa W1219] Length = 656 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + L++ YY + +D +DR+ + L AL+EQ L D P V Sbjct: 4 KERMLALIQQLNEASNAYYNGQREILSDQEWDRLFDELKALEEQ-TGLILPDSPTQKV 60 >gi|86151833|ref|ZP_01070047.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni 260.94] gi|85841462|gb|EAQ58710.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni 260.94] Length = 647 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K E + +V +A + YY D+PL +D YD + L +EQ + +D P Sbjct: 1 MKKEEYLEKVA----LANLWMRAYYEKDEPLASDEEYDVLIRELRVFEEQNKDEISKDSP 56 Query: 114 WNTV 117 + Sbjct: 57 TQKI 60 >gi|121612203|ref|YP_001000287.1| NAD-dependent DNA ligase LigA [Campylobacter jejuni subsp. jejuni 81-176] gi|167005239|ref|ZP_02270997.1| NAD-dependent DNA ligase LigA [Campylobacter jejuni subsp. jejuni 81-176] gi|166215572|sp|A1VYU6|DNLJ_CAMJJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|87250057|gb|EAQ73015.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni 81-176] Length = 647 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K E + +V +A + YY D+PL +D YD + L +EQ + +D P Sbjct: 1 MKKEEYLEKVA----LANLWMRAYYEKDEPLASDEEYDVLIRELRVFEEQNKDEISKDSP 56 Query: 114 WNTV 117 + Sbjct: 57 TQKI 60 >gi|315124105|ref|YP_004066109.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017827|gb|ADT65920.1| DNA ligase, NAD-dependent [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 561 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K E + +V +A + YY D+PL +D YD + L +EQ + +D P Sbjct: 1 MKKEEYLEKVA----LANLWMRAYYEKDEPLASDEEYDVLIRELRVFEEQNKDEISKDSP 56 Query: 114 WNTV 117 + Sbjct: 57 TQKI 60 >gi|406012|gb|AAD10575.1| Significant homology to DNA ligase M74792 [Mycoplasma genitalium] Length = 60 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%) Query: 69 IALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ YY L +PL D YD + + L L++ P+L D P Sbjct: 2 LIKNYDYHYYVLSEPLIDDFEYDMLYKSLQQLEKDHPDLIQIDSPTQR 49 >gi|225630391|ref|YP_002727182.1| DNA ligase [Wolbachia sp. wRi] gi|254782311|sp|C0R399|DNLJ_WOLWR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|225592372|gb|ACN95391.1| DNA ligase [Wolbachia sp. wRi] Length = 662 Score = 58.3 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 ++ E M E L +H Y++ + P +D YD + ++L ++ PE++ Sbjct: 1 MTNLEKMRE--KLQDQINYHNVLYHQKNKPEISDAEYDELKKKLAEIE---PEIY 50 >gi|154499783|ref|ZP_02037821.1| hypothetical protein BACCAP_03440 [Bacteroides capillosus ATCC 29799] gi|150271381|gb|EDM98638.1| hypothetical protein BACCAP_03440 [Bacteroides capillosus ATCC 29799] Length = 673 Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 64 EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 L ++ YY L+ P +D +YDR+ E L L+ + + P NTVGY Sbjct: 10 RELNDRLNRYRNEYYNLNSPSVSDAVYDRLFEELQELESA-TGVQMSNSPTNTVGY 64 >gi|58696662|ref|ZP_00372215.1| DNA ligase, NAD-dependent [Wolbachia endosymbiont of Drosophila simulans] gi|58537163|gb|EAL60267.1| DNA ligase, NAD-dependent [Wolbachia endosymbiont of Drosophila simulans] Length = 656 Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 3/45 (6%) Query: 64 EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 E L +H Y++ + P +D YD + ++L ++ PE++ Sbjct: 3 EKLQDQINYHNVLYHQKNKPEISDAEYDELKKKLAEIE---PEIY 44 >gi|302385528|ref|YP_003821350.1| DNA ligase, NAD-dependent [Clostridium saccharolyticum WM1] gi|302196156|gb|ADL03727.1| DNA ligase, NAD-dependent [Clostridium saccharolyticum WM1] Length = 672 Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 + L + +++ YY + P +D +YDR+ ++L L++Q + + P TVGY Sbjct: 7 EKQRDLTERLNIYREQYYDHNAPSVSDEIYDRLFDKLKELEQQ-TGIHMANSPTQTVGY 64 >gi|167769644|ref|ZP_02441697.1| hypothetical protein ANACOL_00978 [Anaerotruncus colihominis DSM 17241] gi|167668005|gb|EDS12135.1| hypothetical protein ANACOL_00978 [Anaerotruncus colihominis DSM 17241] Length = 674 Score = 57.2 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 + L ++ YY + P +D +YDR+ + L L+++ + + P TVGY Sbjct: 7 EKQRELNDRLNRYRDEYYNRNAPSVSDEVYDRLFDELKELEQE-TGIQMANSPTQTVGY 64 >gi|225028066|ref|ZP_03717258.1| hypothetical protein EUBHAL_02336 [Eubacterium hallii DSM 3353] gi|224954614|gb|EEG35823.1| hypothetical protein EUBHAL_02336 [Eubacterium hallii DSM 3353] Length = 653 Score = 57.2 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ LV++ K YY+ D LF++ YD + + L AL+ + + P VGY Sbjct: 4 QARMKKLVEVLNQASKAYYQEDRELFSNKEYDELYDELQALEAE-TGIVMSQSPTQNVGY 62 >gi|325661475|ref|ZP_08150101.1| DNA ligase [Lachnospiraceae bacterium 4_1_37FAA] gi|325472424|gb|EGC75636.1| DNA ligase [Lachnospiraceae bacterium 4_1_37FAA] Length = 660 Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 ++K E ++ L K ++ YY + + +D YD++ + L+ L+ + L + P Sbjct: 1 MNKTE---RIKELTKKLNEYRNAYYNESESIISDYEYDKLYDELEKLENE-TGLSFANSP 56 Query: 114 WNTVGY 119 TVG+ Sbjct: 57 TKTVGF 62 >gi|323485875|ref|ZP_08091210.1| hypothetical protein HMPREF9474_02961 [Clostridium symbiosum WAL-14163] gi|323400863|gb|EGA93226.1| hypothetical protein HMPREF9474_02961 [Clostridium symbiosum WAL-14163] Length = 674 Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 + L ++ YY + P +D +YDR+ + L L+++ + + P TVGY Sbjct: 7 EKQRDLNDRLNRYRDEYYNRNAPSVSDEVYDRLFDELKELEQE-TGIQMANSPTQTVGY 64 >gi|253680829|ref|ZP_04861632.1| DNA ligase, NAD-dependent [Clostridium botulinum D str. 1873] gi|253562678|gb|EES92124.1| DNA ligase, NAD-dependent [Clostridium botulinum D str. 1873] Length = 664 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ LV YY LD+P D YD+ + L L+++ L P VG Sbjct: 5 KQKIYKLVDELNKLAYEYYVLDNPSVADKDYDKKYDELVQLEKETGMLLS-YSPTQRVG 62 >gi|254389746|ref|ZP_05004971.1| DNA ligase [Streptomyces clavuligerus ATCC 27064] gi|197703458|gb|EDY49270.1| DNA ligase [Streptomyces clavuligerus ATCC 27064] Length = 719 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 30/83 (36%) Query: 35 LPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVS 94 L + + + V + S + E E ++ + YY D D YD++ Sbjct: 23 LSDPHERITLMTTLPAVQAQSAVSSRTEYEAALQRLRDASRAYYGDGDSPLDDATYDQLR 82 Query: 95 ERLDALQEQFPELFDEDHPWNTV 117 + A +++ P D P V Sbjct: 83 RSVLAWEQENPAEVSPDSPTGLV 105 >gi|71082725|ref|YP_265444.1| DNA ligase [Candidatus Pelagibacter ubique HTCC1062] gi|123775550|sp|Q4FPL3|DNLJ_PELUB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|71061838|gb|AAZ20841.1| DNA ligase [Candidatus Pelagibacter ubique HTCC1062] Length = 676 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%) Query: 61 IEVEYLVKI--ALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E+EYL KI H K YY + P+ +D +D + + + L+ ++ L E P ++G Sbjct: 6 LEIEYLKKIDLFQRHNKHYYDKNKPIVSDQEFDLLKKDIIDLERKYKFLKSEYSPTKSIG 65 Query: 119 Y 119 + Sbjct: 66 F 66 >gi|237751760|ref|ZP_04582240.1| NAD-dependent DNA ligase LigA [Helicobacter bilis ATCC 43879] gi|229373126|gb|EEO23517.1| NAD-dependent DNA ligase LigA [Helicobacter bilis ATCC 43879] Length = 686 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 31/65 (47%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + ++ E +K + K YY LDDP+ +D YD + + + +E + +D P Sbjct: 1 MQEIKSHEEYLESIKTLNLYAKHYYELDDPIASDFEYDMLYKAVKLYEENNIDKIAKDSP 60 Query: 114 WNTVG 118 +G Sbjct: 61 TQRIG 65 >gi|319760626|ref|YP_004124564.1| DNA ligase [Candidatus Blochmannia vafer str. BVAF] gi|318039340|gb|ADV33890.1| DNA ligase [Candidatus Blochmannia vafer str. BVAF] Length = 598 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 23/47 (48%) Query: 72 HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + YY ++ +D YD+ + L L+ ++P L E+ P +G Sbjct: 17 QWEYAYYLKNESETSDEEYDKTLQELRQLEFEYPCLITENSPTKFLG 63 >gi|118474676|ref|YP_892270.1| NAD-dependent DNA ligase LigA [Campylobacter fetus subsp. fetus 82-40] gi|166215570|sp|A0RPY7|DNLJ_CAMFF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|118413902|gb|ABK82322.1| DNA ligase, NAD-dependent [Campylobacter fetus subsp. fetus 82-40] Length = 645 Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 K YY D P+ +D YD++ + +++ P+L P N +G Sbjct: 16 WAKAYYTDDSPMASDDEYDKLYNAVVQFEKENPDLKLSYSPTNRIG 61 >gi|297621454|ref|YP_003709591.1| NAD-dependent DNA ligase LigA [Waddlia chondrophila WSU 86-1044] gi|297376755|gb|ADI38585.1| NAD-dependent DNA ligase LigA [Waddlia chondrophila WSU 86-1044] Length = 665 Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 26/59 (44%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E L K H K YY PL D +D + + L+ +++ PE D + P VG Sbjct: 3 KENYEALCKEVWEHNKRYYIDHAPLINDEEFDLLLKELEEIEKMHPEWIDPNSPTQRVG 61 >gi|269114974|ref|YP_003302737.1| NAD(+)-dependent DNA ligase [Mycoplasma hominis] gi|268322599|emb|CAX37334.1| NAD(+)-dependent DNA ligase [Mycoplasma hominis ATCC 23114] Length = 668 Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 4/67 (5%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE---- 110 + E+ L YY LD P D +YD +L AL+E++ F + Sbjct: 6 DIEKIRKEIFDLQAKISAWDNAYYNLDSPEVPDEIYDVEFNKLKALEEKYASFFSDEELK 65 Query: 111 DHPWNTV 117 + P + Sbjct: 66 NSPTRKI 72 >gi|295093347|emb|CBK82438.1| DNA ligase, NAD-dependent [Coprococcus sp. ART55/1] Length = 678 Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 + ++ LVK K YY D + ++ YD + + L+AL+++ + + P VGY Sbjct: 27 IARIKELVKQLNDAAKKYYMEDTEIMSNLEYDALYDELNALEKE-TGMVMSNSPTVKVGY 85 >gi|18311241|ref|NP_563175.1| NAD-dependent DNA ligase LigA [Clostridium perfringens str. 13] gi|18145924|dbj|BAB81965.1| DNA ligase [Clostridium perfringens str. 13] Length = 665 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK + +E LV+ + YY L + TD YD+ L L+++ P Sbjct: 1 MSKMDKKKLIEELVEELNKYAYEYYVLGNSSVTDKDYDKKYYELVDLEKE-TGYKLPYSP 59 Query: 114 WNTVG 118 VG Sbjct: 60 TQRVG 64 >gi|82701055|ref|YP_418155.1| putative NAD-dependent DNA ligase [Pseudomonas phage EL] gi|82657960|emb|CAG27216.1| putative NAD-dependent DNA ligase [Pseudomonas phage EL] Length = 656 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 28/54 (51%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + K + ++YL + +H Y+ + +D YD + + L+ L +++PE+ Sbjct: 1 MGKHSPVERIKYLHEQLTYHAHLYFVENRNEISDEAYDVLEQELNELYDRYPEI 54 >gi|163816857|ref|ZP_02208220.1| hypothetical protein COPEUT_03048 [Coprococcus eutactus ATCC 27759] gi|158448114|gb|EDP25109.1| hypothetical protein COPEUT_03048 [Coprococcus eutactus ATCC 27759] Length = 678 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 + ++ LVK K YY D + ++ YD + + L AL+++ + + P VGY Sbjct: 27 IARIKELVKQLNDAAKKYYMEDTEIMSNLEYDALYDELSALEKE-TGMVMSNSPTVKVGY 85 >gi|291545735|emb|CBL18843.1| pseudouridine synthase family [Ruminococcus sp. SR1/5] Length = 610 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 +++ L + + YY+ D + ++ YD + + L AL+++ + D P VGY Sbjct: 168 KKMKELGEKLREASRAYYQEDREIMSNVEYDALYDTLSALEKE-TGIVLADSPTVNVGY 225 >gi|257466592|ref|ZP_05630903.1| NAD-dependent DNA ligase [Fusobacterium gonidiaformans ATCC 25563] gi|315917747|ref|ZP_07913987.1| DNA ligase [Fusobacterium gonidiaformans ATCC 25563] gi|313691622|gb|EFS28457.1| DNA ligase [Fusobacterium gonidiaformans ATCC 25563] Length = 676 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK E E L K + YY ++ L +D YD + + L+ L+ + ++ ++D Sbjct: 2 ISKKEKENRREELQKKLQRYSDAYYSQNESLISDYEYDMLLKELENLEAEL-QIQNKDSI 60 Query: 114 WNTVG 118 TVG Sbjct: 61 TQTVG 65 >gi|91762853|ref|ZP_01264818.1| DNA ligase [Candidatus Pelagibacter ubique HTCC1002] gi|91718655|gb|EAS85305.1| DNA ligase [Candidatus Pelagibacter ubique HTCC1002] Length = 676 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%) Query: 61 IEVEYLVKI--ALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E+EYL KI H K YY + P+ +D +D + + + L+ ++ L E P ++G Sbjct: 6 LEIEYLKKIDLFQTHNKHYYDKNKPIVSDQEFDLLKKDIIDLESKYKFLKSEYSPTKSIG 65 Query: 119 Y 119 + Sbjct: 66 F 66 >gi|160895209|ref|ZP_02075981.1| hypothetical protein CLOL250_02768 [Clostridium sp. L2-50] gi|156863088|gb|EDO56519.1| hypothetical protein CLOL250_02768 [Clostridium sp. L2-50] Length = 653 Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E ++ LV+ K YY+ D + ++ YD + + L L+++ + + P V Sbjct: 2 EKRDRIKELVEKLNEASKKYYQEDTEIMSNLEYDALYDELVELEKE-TGIVMSNSPTVHV 60 Query: 118 GY 119 GY Sbjct: 61 GY 62 >gi|116514984|ref|YP_802613.1| DNA ligase [Buchnera aphidicola str. Cc (Cinara cedri)] gi|122285620|sp|Q058C9|DNLJ_BUCCC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|116256838|gb|ABJ90520.1| DNA ligase [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 587 Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 23/43 (53%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 ++ L +H Y+ LD P+ +D LYD + +L L++ + Sbjct: 7 QILKLQLQIKYHNYMYHTLDSPIISDILYDELYNKLLQLEKLY 49 >gi|47459030|ref|YP_015892.1| NAD(+)-dependent DNA ligase [Mycoplasma mobile 163K] gi|81614352|sp|Q6KI95|DNLJ_MYCMO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|47458358|gb|AAT27681.1| NAD(+)-dependent DNA ligase [Mycoplasma mobile 163K] Length = 671 Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 29/72 (40%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 K+K + + E L K Y+ D+PL D +YD +L + Q+ Sbjct: 4 KSKMNDNEKNNRIISEYNDLKNKINLWNKAYFDYDEPLVEDSIYDATLLKLIKFENQYKF 63 Query: 107 LFDEDHPWNTVG 118 L + D P +G Sbjct: 64 LDNSDSPTKNIG 75 >gi|261886171|ref|ZP_06010210.1| NAD-dependent DNA ligase LigA [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 292 Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 23/46 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 K YY D P+ +D YD++ + +++ P+L P N +G Sbjct: 16 WAKAYYTDDSPMASDDEYDKLYNAVVQFEKENPDLKLSYSPTNRIG 61 >gi|255321406|ref|ZP_05362566.1| DNA ligase, NAD-dependent [Campylobacter showae RM3277] gi|255301559|gb|EET80816.1| DNA ligase, NAD-dependent [Campylobacter showae RM3277] Length = 647 Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 19/59 (32%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 E V K YY D P+ TD YD + ++ + P VG Sbjct: 3 KKEYLEAVDTLNAWAKAYYTDDAPIATDEEYDELYHKVLEFERANLGEISMFSPTKRVG 61 >gi|197294788|ref|YP_001799329.1| NAD-dependent DNA ligase [Candidatus Phytoplasma australiense] gi|254781387|sp|B1VAY1|DNLJ_PHYAS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|171854115|emb|CAM12104.1| NAD-dependent DNA ligase [Candidatus Phytoplasma australiense] Length = 670 Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 25/60 (41%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +++ L YY +P TD YD + + L L+++FP+ P +G Sbjct: 7 IEKKIKDLTNQLNEANYEYYVKSNPKLTDQQYDALLKELLVLEKKFPQFTLPYSPTLKIG 66 >gi|54024876|ref|YP_119118.1| putative DNA ligase [Nocardia farcinica IFM 10152] gi|81374723|sp|Q5YVN7|DNLJ1_NOCFA RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 1 gi|54016384|dbj|BAD57754.1| putative DNA ligase [Nocardia farcinica IFM 10152] Length = 663 Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A + L + + YY PL D YD V + L AL PEL + +P + V Sbjct: 2 DAGERIRELADRIVELRTAYY-EGAPLVADAEYDAVEDELRALIAAHPELAPDPNPLDQV 60 Query: 118 G 118 G Sbjct: 61 G 61 >gi|82548271|gb|ABB82962.1| NAD-dependent DNA ligase [uncultured organism HF70_19B12] Length = 707 Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + E + L H + YY +P TD +D + +RL + P+L Sbjct: 8 ISEADRLASEIQRHSELYYNYAEPEITDAQFDLLIQRLREIDPSNPQL 55 >gi|239624075|ref|ZP_04667106.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239522106|gb|EEQ61972.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 650 Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + ++ LV K YY+ + ++ YDR+ + L +L+++ + P Sbjct: 2 EDRIQRMKELVSTLRQAGKAYYQESREIMSNFEYDRLYDELCSLEKE-TGIIMSGSPTQR 60 Query: 117 VGY 119 VGY Sbjct: 61 VGY 63 >gi|284031885|ref|YP_003381816.1| DNA ligase, NAD-dependent [Kribbella flavida DSM 17836] gi|283811178|gb|ADB33017.1| DNA ligase, NAD-dependent [Kribbella flavida DSM 17836] Length = 671 Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + +E L + + YYR P D YD + + L AL PEL + +P + V Sbjct: 9 DVGERIETLADQIVQLRDAYYR-GAPAVADAEYDAIEDELRALIAAHPELAPDPNPLDQV 67 Query: 118 G 118 G Sbjct: 68 G 68 >gi|326445394|ref|ZP_08220128.1| DNA ligase [Streptomyces clavuligerus ATCC 27064] Length = 687 Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 27/73 (36%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + V + S + E E ++ + YY D D YD++ + A +++ Sbjct: 1 MTTLPAVQAQSAVSSRTEYEAALQRLRDASRAYYGDGDSPLDDATYDQLRRSVLAWEQEN 60 Query: 105 PELFDEDHPWNTV 117 P D P V Sbjct: 61 PAEVSPDSPTGLV 73 >gi|261414540|ref|YP_003248223.1| DNA ligase, NAD-dependent [Fibrobacter succinogenes subsp. succinogenes S85] gi|261370996|gb|ACX73741.1| DNA ligase, NAD-dependent [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326001|gb|ADL25202.1| DNA ligase (NAD+) [Fibrobacter succinogenes subsp. succinogenes S85] Length = 715 Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 28/74 (37%), Gaps = 7/74 (9%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + + K + L K + YY+ +D +D + ++AL+ ++ Sbjct: 1 MSEQKDID-------RTRYFELKKQLEEASRLYYKDGVSPMSDQDFDFGLKEMEALEAKY 53 Query: 105 PELFDEDHPWNTVG 118 PEL + VG Sbjct: 54 PELRGKGSLTQKVG 67 >gi|281358582|ref|ZP_06245061.1| DNA ligase (NAD(+)) [Victivallis vadensis ATCC BAA-548] gi|281314930|gb|EFA98964.1| DNA ligase (NAD(+)) [Victivallis vadensis ATCC BAA-548] Length = 626 Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 64 EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 + L+++ +H + Y+ +P D YD + L L+ EL Sbjct: 14 DELIRLIEYHNRRYWDEGEPEIPDARYDELIRALQKLEPDH-ELVT 58 >gi|168216777|ref|ZP_02642402.1| DNA ligase, NAD-dependent [Clostridium perfringens NCTC 8239] gi|182381157|gb|EDT78636.1| DNA ligase, NAD-dependent [Clostridium perfringens NCTC 8239] Length = 662 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E LV+ + YY L + TD YD+ L L+++ P VG Sbjct: 7 IEELVEELNKYAYEYYVLGNSSVTDKDYDKKYYELVDLEKE-TGYKLPYSPTQRVG 61 >gi|168211265|ref|ZP_02636890.1| DNA ligase, NAD-dependent [Clostridium perfringens B str. ATCC 3626] gi|170710700|gb|EDT22882.1| DNA ligase, NAD-dependent [Clostridium perfringens B str. ATCC 3626] Length = 662 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E LV+ + YY L + TD YD+ L L+++ P VG Sbjct: 7 IEELVEELNKYAYEYYVLGNSSVTDKDYDKKYYELVDLEKE-TGYKLPYSPTQRVG 61 >gi|166215590|sp|Q8XI62|DNLJ_CLOPE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 662 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E LV+ + YY L + TD YD+ L L+++ P VG Sbjct: 7 IEELVEELNKYAYEYYVLGNSSVTDKDYDKKYYELVDLEKE-TGYKLPYSPTQRVG 61 >gi|110801053|ref|YP_696931.1| NAD-dependent DNA ligase LigA [Clostridium perfringens ATCC 13124] gi|123049624|sp|Q0TN59|DNLJ_CLOP1 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|110675700|gb|ABG84687.1| DNA ligase, NAD-dependent [Clostridium perfringens ATCC 13124] Length = 662 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E LV+ + YY L + TD YD+ L L+++ P VG Sbjct: 7 IEELVEELNKYAYEYYVLGNSSVTDKDYDKKYYELVDLEKE-TGYKLPYSPTQRVG 61 >gi|182625562|ref|ZP_02953333.1| DNA ligase, NAD-dependent [Clostridium perfringens D str. JGS1721] gi|177909250|gb|EDT71715.1| DNA ligase, NAD-dependent [Clostridium perfringens D str. JGS1721] Length = 662 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E LV+ + YY L + TD YD+ L L+++ P VG Sbjct: 7 IEELVEELNKYAYEYYVLGNSSVTDKDYDKKYYELVDLEKE-TGYKLPYSPTQRVG 61 >gi|168205087|ref|ZP_02631092.1| DNA ligase, NAD-dependent [Clostridium perfringens E str. JGS1987] gi|170663244|gb|EDT15927.1| DNA ligase, NAD-dependent [Clostridium perfringens E str. JGS1987] Length = 662 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E LV+ + YY L + TD YD+ L L+++ P VG Sbjct: 7 IEELVEELNKYAYEYYVLGNSSVTDKDYDKKYYELVDLEKE-TGYKLPYSPTQRVG 61 >gi|110803876|ref|YP_699521.1| NAD-dependent DNA ligase LigA [Clostridium perfringens SM101] gi|122956526|sp|Q0SQT6|DNLJ_CLOPS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|110684377|gb|ABG87747.1| DNA ligase, NAD-dependent [Clostridium perfringens SM101] Length = 662 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E LV+ + YY L + TD YD+ L L+++ P VG Sbjct: 7 IEELVEELNKYAYEYYVLGNSSVTDKDYDKKYYELVDLEKE-TGYKLPYSPTQRVG 61 >gi|240047590|ref|YP_002960978.1| DNA ligase [Mycoplasma conjunctivae HRC/581] gi|239985162|emb|CAT05172.1| DNA ligase [Mycoplasma conjunctivae] Length = 673 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 4/69 (5%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED-- 111 + E ++ L K + Y+ L +P D +YD ++L L+ ++ LF + Sbjct: 1 MENHEIKQQILQLRKKIENWNHEYFDLQNPSVDDLIYDEELKKLKILENKYYFLFSLEEL 60 Query: 112 --HPWNTVG 118 P +G Sbjct: 61 NSSPTQQIG 69 >gi|58699501|ref|ZP_00374229.1| DNA ligase, NAD-dependent [Wolbachia endosymbiont of Drosophila ananassae] gi|58533981|gb|EAL58252.1| DNA ligase, NAD-dependent [Wolbachia endosymbiont of Drosophila ananassae] Length = 143 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 ++ E M E L +H Y++ + P +D YD + ++L ++ PE++ Sbjct: 1 MTNLEKMRE--KLQDQINYHNVLYHQKNKPEISDAEYDELKKKLAEIE---PEIY 50 >gi|168213168|ref|ZP_02638793.1| DNA ligase, NAD-dependent [Clostridium perfringens CPE str. F4969] gi|170715278|gb|EDT27460.1| DNA ligase, NAD-dependent [Clostridium perfringens CPE str. F4969] Length = 662 Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E LV+ + YY L + TD YD+ L L+++ P VG Sbjct: 7 IEELVEELNKYAYEYYVLGNSSVTDKDYDKKYYELVDLEKE-TGYKLPYSPTQRVG 61 >gi|255994850|ref|ZP_05427985.1| DNA ligase [Eubacterium saphenum ATCC 49989] gi|255993563|gb|EEU03652.1| DNA ligase [Eubacterium saphenum ATCC 49989] Length = 647 Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 + + L+ I K YY + + ++ YD + + L AL+E+ + P VGY Sbjct: 4 ITRMNELIDILSKANKAYYSDANEIMSNREYDELYDELQALEEE-SGIVLAASPTVNVGY 62 >gi|291460667|ref|ZP_06600057.1| DNA ligase, NAD-dependent [Oribacterium sp. oral taxon 078 str. F0262] gi|291416626|gb|EFE90345.1| DNA ligase, NAD-dependent [Oribacterium sp. oral taxon 078 str. F0262] Length = 664 Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 + ++ L+ I K YY+ D + ++ YD++ + L L+ + + P VGY Sbjct: 3 IERMKELIGILNRASKAYYQDGDEIMSNLEYDKLYDELQGLERE-TGIVLSASPTERVGY 61 >gi|169347054|ref|ZP_02865996.1| DNA ligase, NAD-dependent [Clostridium perfringens C str. JGS1495] gi|169296737|gb|EDS78866.1| DNA ligase, NAD-dependent [Clostridium perfringens C str. JGS1495] Length = 662 Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E LV+ + YY L + TD YD+ L L+++ P VG Sbjct: 7 IEELVEELNKYAYEYYVLGNSSVTDKDYDKKYYELLDLEKE-TGYKLPYSPTQRVG 61 >gi|302387645|ref|YP_003823467.1| DNA ligase, NAD-dependent [Clostridium saccharolyticum WM1] gi|302198273|gb|ADL05844.1| DNA ligase, NAD-dependent [Clostridium saccharolyticum WM1] Length = 654 Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 M ++ LV + K YY+ + ++ YDR+ + L L+++ + P VGY Sbjct: 5 MSRMKELVNLLTAAGKAYYQESREIMSNFEYDRLYDELKELEDE-TGVILSKSPTQNVGY 63 >gi|168187649|ref|ZP_02622284.1| DNA ligase, NAD-dependent [Clostridium botulinum C str. Eklund] gi|169294495|gb|EDS76628.1| DNA ligase, NAD-dependent [Clostridium botulinum C str. Eklund] Length = 649 Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 1/59 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 V+ L+K YY D D +D + L L+++ E+ + P VGY Sbjct: 6 QRVKELIKELNEASDKYYNSDKTTMIDKEWDDKFDELKQLEQE-TEVILSNSPTQKVGY 63 >gi|323695090|ref|ZP_08109232.1| DNA ligase [Clostridium symbiosum WAL-14673] gi|323500845|gb|EGB16765.1| DNA ligase [Clostridium symbiosum WAL-14673] Length = 663 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 + LV + YY+ + ++ YDR+ + L L+++ + P VGY Sbjct: 13 ARIRELVDTLSAAGRAYYQESREIMSNFEYDRLYDELAELEKE-TGIVFAGSPTQNVGY 70 >gi|323485704|ref|ZP_08091041.1| hypothetical protein HMPREF9474_02792 [Clostridium symbiosum WAL-14163] gi|323400967|gb|EGA93328.1| hypothetical protein HMPREF9474_02792 [Clostridium symbiosum WAL-14163] Length = 663 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 + LV + YY+ + ++ YDR+ + L L+++ + P VGY Sbjct: 13 ARIRELVDTLSAAGRAYYQESREIMSNFEYDRLYDELAELEKE-TGIVFAGSPTQNVGY 70 >gi|283797409|ref|ZP_06346562.1| DNA ligase, NAD-dependent [Clostridium sp. M62/1] gi|291074764|gb|EFE12128.1| DNA ligase, NAD-dependent [Clostridium sp. M62/1] gi|295090074|emb|CBK76181.1| DNA ligase, NAD-dependent [Clostridium cf. saccharolyticum K10] Length = 684 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ L+ I + YY+ + ++ YDR+ + L L+ + + P VGY Sbjct: 31 ERMKELIGILREAGRAYYQESREVMSNFEYDRLYDELLELERE-TGTVFGNSPTQNVGY 88 >gi|154484656|ref|ZP_02027104.1| hypothetical protein EUBVEN_02373 [Eubacterium ventriosum ATCC 27560] gi|149734504|gb|EDM50421.1| hypothetical protein EUBVEN_02373 [Eubacterium ventriosum ATCC 27560] Length = 655 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K E ++ LV++ K YY+ + + T+ YD++ + L L+++ + + P Sbjct: 1 MDKSE---RIKDLVELLNKANKAYYQEANEIMTNFEYDKLYDELVGLEKE-TGMVLSNSP 56 Query: 114 WNTVGY 119 VGY Sbjct: 57 TVNVGY 62 >gi|310778043|ref|YP_003966376.1| DNA ligase, NAD-dependent [Ilyobacter polytropus DSM 2926] gi|309747366|gb|ADO82028.1| DNA ligase, NAD-dependent [Ilyobacter polytropus DSM 2926] Length = 677 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 24/40 (60%) Query: 79 RLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L +D YD++ + L+ ++++ PE+ DE P VG Sbjct: 24 VKNESLVSDIEYDKLLKELEEIEKKHPEIKDELSPTRQVG 63 >gi|281212695|gb|EFA86855.1| BRCT domain-containing protein [Polysphondylium pallidum PN500] Length = 1835 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 5/62 (8%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQ----EQFPELFDE-DHPWNT 116 E+ + + YY L +D YD + +RL L+ ++FP P NT Sbjct: 58 EILKIRDEIKKYNDSYYNKSQSLISDYQYDMLFKRLATLESQFHQRFPHSKMLGQSPLNT 117 Query: 117 VG 118 VG Sbjct: 118 VG 119 >gi|257452731|ref|ZP_05618030.1| NAD-dependent DNA ligase [Fusobacterium sp. 3_1_5R] gi|317059272|ref|ZP_07923757.1| NAD-dependent DNA ligase [Fusobacterium sp. 3_1_5R] gi|313684948|gb|EFS21783.1| NAD-dependent DNA ligase [Fusobacterium sp. 3_1_5R] Length = 676 Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +SK E E L K + YY ++ L +D YD + + L+ L+++ ++ ++ Sbjct: 2 ISKKEKENRREELQKKLQRYSDAYYSQNESLISDYEYDMLLKELEQLEKEL-QIENKSSI 60 Query: 114 WNTVG 118 VG Sbjct: 61 TQKVG 65 >gi|331086070|ref|ZP_08335153.1| DNA ligase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406993|gb|EGG86498.1| DNA ligase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 653 Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ LV++ K YY+ + ++ YDR+ + L L+++ + + P Sbjct: 2 EQKKQRMQELVQLLNQAGKAYYQDAKEIMSNHEYDRLYDELLVLEQEL-GITMANSPTVN 60 Query: 117 VGY 119 VGY Sbjct: 61 VGY 63 >gi|254383856|ref|ZP_04999203.1| DNA ligase [Streptomyces sp. Mg1] gi|194342748|gb|EDX23714.1| DNA ligase [Streptomyces sp. Mg1] Length = 696 Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 28/83 (33%), Gaps = 4/83 (4%) Query: 35 LPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVS 94 L +AL S + + E + L + + YY D + D YDR+ Sbjct: 4 LTAAQALSSTSGTSGPAALTGRSEYEAALRRLREA----SQAYYGDGDSVMDDASYDRLR 59 Query: 95 ERLDALQEQFPELFDEDHPWNTV 117 L A + + P P V Sbjct: 60 LALLAWETEHPAEVAPGSPTTLV 82 >gi|210617503|ref|ZP_03291606.1| hypothetical protein CLONEX_03828 [Clostridium nexile DSM 1787] gi|210149290|gb|EEA80299.1| hypothetical protein CLONEX_03828 [Clostridium nexile DSM 1787] Length = 653 Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ LV++ K YY+ + ++ YD++ + L AL+++ + P Sbjct: 2 EQKKQRMQELVQLLNEAGKAYYQGTAEIMSNYEYDKLYDELLALEKEL-GITLASSPTVN 60 Query: 117 VGY 119 VGY Sbjct: 61 VGY 63 >gi|160881055|ref|YP_001560023.1| DNA ligase, NAD-dependent [Clostridium phytofermentans ISDg] gi|190359247|sp|A9KPL0|DNLJ_CLOPH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|160429721|gb|ABX43284.1| DNA ligase, NAD-dependent [Clostridium phytofermentans ISDg] Length = 653 Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 + L ++ + Y + D + ++ YD++ + L L+E+ + P VGY Sbjct: 5 KQRITQLTELLDEAARVYEQEDREIMSNFEYDKLYDELKKLEEE-TGIVLAGSPTRKVGY 63 >gi|291562521|emb|CBL41337.1| NAD-dependent DNA ligase (contains BRCT domain type II) [butyrate-producing bacterium SS3/4] Length = 169 Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 + ++ L+ I K YY+ + ++ YDR+ + L L+++ P VGY Sbjct: 5 IKRMKELIPILSEAAKAYYQESREIMSNFEYDRLYDELLKLEQE-TGTVFAGSPTQKVGY 63 >gi|166030629|ref|ZP_02233458.1| hypothetical protein DORFOR_00295 [Dorea formicigenerans ATCC 27755] gi|166029631|gb|EDR48388.1| hypothetical protein DORFOR_00295 [Dorea formicigenerans ATCC 27755] Length = 647 Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ LV++ K YY+ + + ++ YD++ + L L+ + + + P VGY Sbjct: 1 MKELVELLNKASKAYYQDAEEIMSNYEYDKLYDELQELEREL-GITLSNSPTVRVGY 56 >gi|311900456|dbj|BAJ32864.1| putative DNA ligase [Kitasatospora setae KM-6054] Length = 718 Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 15/41 (36%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY D YD + + A +E PE D P V Sbjct: 34 YYGDGTTTLGDDEYDALVRAIAAYEEAHPEELLADSPTGKV 74 >gi|154502352|ref|ZP_02039412.1| hypothetical protein RUMGNA_00165 [Ruminococcus gnavus ATCC 29149] gi|153796977|gb|EDN79397.1| hypothetical protein RUMGNA_00165 [Ruminococcus gnavus ATCC 29149] Length = 655 Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 5/62 (8%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD--EDHPWNTV 117 ++ LV++ ++ Y + D + ++ YDR+ + L+ L+ EL P V Sbjct: 5 KKRMQELVELLNRARRAYEQEDTEIMSNYEYDRLYDELEGLER---ELGTTLASSPTVNV 61 Query: 118 GY 119 GY Sbjct: 62 GY 63 >gi|80159718|ref|YP_398462.1| putative NAD-dependent DNA ligase [Clostridium phage c-st] gi|78675308|dbj|BAE47730.1| putative NAD-dependent DNA ligase [Clostridium phage c-st] Length = 649 Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 + V+ L+K YY D + TD +D E L L+++ + + P VGY Sbjct: 5 IQRVKKLIKELNDASNKYYNSDKTVMTDKEWDDKYEELKQLEQE-TGVVFSNSPTQKVGY 63 >gi|331002925|ref|ZP_08326438.1| DNA ligase [Lachnospiraceae oral taxon 107 str. F0167] gi|330413218|gb|EGG92592.1| DNA ligase [Lachnospiraceae oral taxon 107 str. F0167] Length = 650 Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 + LV I K YY + + YD++ + L AL+++ + + P VGY Sbjct: 4 KQRIRELVDILNKAAKSYYVDAVEIMPNIEYDKLYDELLALEKE-TNVVLSNSPTQNVGY 62 >gi|308188670|ref|YP_003932801.1| DNA ligase [Pantoea vagans C9-1] gi|308059180|gb|ADO11352.1| DNA ligase [Pantoea vagans C9-1] Length = 583 Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 21/61 (34%), Gaps = 7/61 (11%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + A E+ L + H YYR D YD + +RL Q F P+ Sbjct: 29 TPNRATEEIRRLQQQLQHWDDAYYRQGQSPVADADYDALQQRLIQWQHCF-------SPY 81 Query: 115 N 115 Sbjct: 82 Q 82 >gi|284047072|ref|YP_003397412.1| DNA ligase, NAD-dependent [Conexibacter woesei DSM 14684] gi|283951293|gb|ADB54037.1| DNA ligase, NAD-dependent [Conexibacter woesei DSM 14684] Length = 670 Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + L HH+ Y R P D YD + + L AL PE+ +D+P + Sbjct: 7 EQARALAAQIDHHRGLYAR-GAPALVDADYDALEDELRALLAASPEVVLDDNPLDR 61 >gi|225419696|ref|ZP_03761999.1| hypothetical protein CLOSTASPAR_06034 [Clostridium asparagiforme DSM 15981] gi|225041660|gb|EEG51906.1| hypothetical protein CLOSTASPAR_06034 [Clostridium asparagiforme DSM 15981] Length = 654 Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + ++ LV + K YY+ + ++ YDR+ + L AL+ + + P Sbjct: 2 EDRIERMKELVSLLSKAGKAYYQESREIMSNFEYDRLYDELTALERE-TGVTLSGSPTKR 60 Query: 117 VGY 119 VGY Sbjct: 61 VGY 63 >gi|111226523|ref|XP_001134548.1| BRCT domain-containing protein [Dictyostelium discoideum AX4] gi|90970627|gb|EAS66865.1| BRCT domain-containing protein [Dictyostelium discoideum AX4] Length = 843 Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 4/53 (7%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L + YY +D YD++ +RL+ L+++F ++ N VG Sbjct: 71 LRNKINRYNDLYYNKSKSEISDFEYDKLFKRLEILEKKF----NQQTITNQVG 119 >gi|167745884|ref|ZP_02418011.1| hypothetical protein ANACAC_00578 [Anaerostipes caccae DSM 14662] gi|167654748|gb|EDR98877.1| hypothetical protein ANACAC_00578 [Anaerostipes caccae DSM 14662] Length = 651 Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ L+ I K YY+ + L ++ YD++ + L L+++ + D P VGY Sbjct: 7 RMKELIHILSEASKAYYQENRELMSNFEYDKLYDELLELEKE-TDTVLADSPSIHVGY 63 >gi|331270899|ref|YP_004385610.1| putative NAD-dependent DNA ligase [Clostridium botulinum BKT015925] gi|329127291|gb|AEB77235.1| putative NAD-dependent DNA ligase [Clostridium botulinum BKT015925] Length = 649 Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 V+ L+K YY D+ + TD +D ++L L++ + + P VGY Sbjct: 6 QRVKELIKELNQASDKYYNSDETVMTDKEWDDKFDKLKQLEQD-TGIILSNSPTQKVGY 63 >gi|330800435|ref|XP_003288242.1| hypothetical protein DICPUDRAFT_152457 [Dictyostelium purpureum] gi|325081750|gb|EGC35255.1| hypothetical protein DICPUDRAFT_152457 [Dictyostelium purpureum] Length = 835 Score = 50.6 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQ 103 E+ L + YY +D YD++ ++L++L++Q Sbjct: 51 EINELRNKIKRYNDLYYNKSISEISDYEYDKLFKKLESLEKQ 92 >gi|291522304|emb|CBK80597.1| DNA ligase, NAD-dependent [Coprococcus catus GD/7] Length = 653 Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ L I K YY D L ++ YD + + L L+++ + + P VGY Sbjct: 5 ADRIKELTGILNRASKAYYMQDTELMSNYEYDALYDELVQLEKE-TGITLSNSPTIHVGY 63 >gi|254456450|ref|ZP_05069879.1| DNA ligase, NAD-dependent [Candidatus Pelagibacter sp. HTCC7211] gi|207083452|gb|EDZ60878.1| DNA ligase, NAD-dependent [Candidatus Pelagibacter sp. HTCC7211] Length = 676 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 31/66 (46%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K E + +K+ + ++YY + PL D YD + + +L++++ L + P Sbjct: 1 MDKKEIQKLYQEKIKLLNKYNQYYYDKNKPLIDDKNYDELKISILSLEKKYNFLASKKSP 60 Query: 114 WNTVGY 119 GY Sbjct: 61 SEITGY 66 >gi|218133029|ref|ZP_03461833.1| hypothetical protein BACPEC_00890 [Bacteroides pectinophilus ATCC 43243] gi|217991902|gb|EEC57906.1| hypothetical protein BACPEC_00890 [Bacteroides pectinophilus ATCC 43243] Length = 656 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ LV I + YY + ++ YD + + L L+++ P VGY Sbjct: 11 RIKELVDILNKAGRAYYAQGQEIMSNYEYDALYDELAELEKK-TGCVLASSPTVNVGY 67 >gi|291165072|gb|ADD81100.1| gp102 [Rhodococcus phage ReqiPoco6] Length = 541 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 53 SLSKGEA-MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 L+ ++ +++L L H YY +D + TD +D ++ L LQ+++PE Sbjct: 9 QLTDDQSCGDRIQHLRIRILVHSYLYYEMDQNILTDREFDALAYELVDLQKRYPE 63 >gi|229825369|ref|ZP_04451438.1| hypothetical protein GCWU000182_00723 [Abiotrophia defectiva ATCC 49176] gi|229790373|gb|EEP26487.1| hypothetical protein GCWU000182_00723 [Abiotrophia defectiva ATCC 49176] Length = 664 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + ++ L+ + K YY + ++ YD++ + L+AL+ + + Sbjct: 1 MDINSKKQRMKELIDVLDKAAKAYYAESTEIMSNAEYDKLYDELEALENE-TGIVLAGSL 59 Query: 114 WNTVGY 119 VGY Sbjct: 60 TKKVGY 65 >gi|325662259|ref|ZP_08150874.1| hypothetical protein HMPREF0490_01612 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471511|gb|EGC74732.1| hypothetical protein HMPREF0490_01612 [Lachnospiraceae bacterium 4_1_37FAA] Length = 260 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++ LV++ K YY+ + ++ YDR+ + L L+++ + + P Sbjct: 2 EQKKQRMQELVQLLNQAGKAYYQDAKEIMSNHEYDRLYDELLVLEQEL-GITMANSPTVN 60 Query: 117 VGY 119 VGY Sbjct: 61 VGY 63 >gi|317050124|ref|YP_004117772.1| DNA ligase (NAD(+)) [Pantoea sp. At-9b] gi|316951741|gb|ADU71216.1| DNA ligase (NAD(+)) [Pantoea sp. At-9b] Length = 589 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 4/57 (7%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 S A E+ L H YYR +D YD +S+RL +Q+ F D Sbjct: 26 SPIRAGQEIAQLTTQLRHWDDAYYRQGLNPVSDADYDSLSQRL----QQWQHCFTPD 78 >gi|315652468|ref|ZP_07905453.1| DNA ligase [Eubacterium saburreum DSM 3986] gi|315485257|gb|EFU75654.1| DNA ligase [Eubacterium saburreum DSM 3986] Length = 649 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ LV+I K YY + + YD++ + L +L+++ + + P VGY Sbjct: 4 RKRIKELVEILNKAAKSYYVDAVEIMPNIEYDKLYDELVSLEKE-TNVVLSNSPTQNVGY 62 >gi|162452733|ref|YP_001615100.1| DNA ligase [Sorangium cellulosum 'So ce 56'] gi|190359289|sp|A9F3W3|DNLJ_SORC5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|161163315|emb|CAN94620.1| DNA ligase [Sorangium cellulosum 'So ce 56'] Length = 676 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 1/60 (1%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + + +E L + ++ YY P +D +D + + L AL P L Sbjct: 21 TDPKHKARIEELAERIEKYRASYYA-GHPEISDAAFDALEDELRALDPAHPVLARVGSAS 79 >gi|327313400|ref|YP_004328837.1| NAD-dependent DNA ligase domain-containing protein [Prevotella denticola F0289] gi|326944680|gb|AEA20565.1| NAD-dependent DNA ligase domain protein [Prevotella denticola F0289] Length = 684 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E++ LVK YY + L TD +D +RL L+EQ + D P V Sbjct: 3 KEIQSLVKQLNAASDAYYNGREELMTDYEWDAAFDRLKKLEEQ-TGIVLPDSPTQNV 58 >gi|325856672|ref|ZP_08172310.1| NAD-dependent DNA ligase OB-fold domain [Prevotella denticola CRIS 18C-A] gi|325483386|gb|EGC86361.1| NAD-dependent DNA ligase OB-fold domain [Prevotella denticola CRIS 18C-A] Length = 684 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E++ LVK YY + L TD +D +RL L+EQ + D P V Sbjct: 3 KEIQSLVKQLNAASDAYYNGREELMTDYEWDAAFDRLKKLEEQ-TGIVLPDSPTQNV 58 >gi|291164964|gb|ADD80993.1| gp102 [Rhodococcus phage ReqiPepy6] Length = 542 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 24/45 (53%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 ++ L L H YY LD + TD +D ++ L LQ+++PE Sbjct: 19 RIQQLRMRILVHSYLYYELDQNILTDREFDTLAYELVDLQKRYPE 63 >gi|153855784|ref|ZP_01996785.1| hypothetical protein DORLON_02806 [Dorea longicatena DSM 13814] gi|149751911|gb|EDM61842.1| hypothetical protein DORLON_02806 [Dorea longicatena DSM 13814] Length = 647 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ LV + + YY+ + ++ YDR+ + L L+++ + + P VGY Sbjct: 1 MKELVSLLNKASRAYYQEAQEIMSNYEYDRLYDELKELEDEL-GITLSNSPTVNVGY 56 >gi|260587930|ref|ZP_05853843.1| DNA ligase, NAD-dependent [Blautia hansenii DSM 20583] gi|331084525|ref|ZP_08333626.1| DNA ligase [Lachnospiraceae bacterium 6_1_63FAA] gi|260541457|gb|EEX22026.1| DNA ligase, NAD-dependent [Blautia hansenii DSM 20583] gi|330401233|gb|EGG80824.1| DNA ligase [Lachnospiraceae bacterium 6_1_63FAA] Length = 650 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 M ++ L+K+ K YY+ D + ++ YD++ + L L+ + + P +VGY Sbjct: 4 MKRMKELLKLLTEASKAYYQEDREIMSNFEYDKLYDELVQLERE-TGVTLAGSPTASVGY 62 >gi|160935782|ref|ZP_02083157.1| hypothetical protein CLOBOL_00672 [Clostridium bolteae ATCC BAA-613] gi|158441526|gb|EDP19236.1| hypothetical protein CLOBOL_00672 [Clostridium bolteae ATCC BAA-613] Length = 651 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + + ++ LV I K YY+ + ++ YD++ + L +L+++ + P Sbjct: 2 EDRIQRMKELVSILREAGKAYYQESREIMSNFEYDKLYDELVSLEKE-TGVTLSGSPSQQ 60 Query: 117 VGY 119 VGY Sbjct: 61 VGY 63 >gi|300785073|ref|YP_003765364.1| DNA ligase (NAD+) [Amycolatopsis mediterranei U32] gi|299794587|gb|ADJ44962.1| DNA ligase (NAD+) [Amycolatopsis mediterranei U32] Length = 663 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L + YYR PL D YD V + L +L E PE + +P + VG Sbjct: 3 AQERIPELADRITVLRDAYYR-GSPLVADAEYDAVEDELRSLIEAHPEFTPDPNPLDQVG 61 >gi|325269002|ref|ZP_08135623.1| NAD-dependent DNA ligase LigA [Prevotella multiformis DSM 16608] gi|324988623|gb|EGC20585.1| NAD-dependent DNA ligase LigA [Prevotella multiformis DSM 16608] Length = 684 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E++ LV YY + L TD +D +RL L+EQ + D P V Sbjct: 3 KEIQRLVDRLNAASDAYYNGREELMTDYEWDAAFDRLKKLEEQ-TGIVLPDSPTQNV 58 >gi|291525249|emb|CBK90836.1| NAD-dependent DNA ligase (contains BRCT domain type II) [Eubacterium rectale DSM 17629] gi|291529292|emb|CBK94878.1| NAD-dependent DNA ligase (contains BRCT domain type II) [Eubacterium rectale M104/1] Length = 656 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +++ LV+ K YY D + + +D + + L L+++ D P Sbjct: 1 MENNKIKDKIDELVESLNRASKAYYNGADEIMPNYEWDAMFDELTQLEKE-TGYIRHDSP 59 Query: 114 WNTVGY 119 GY Sbjct: 60 TQNAGY 65 >gi|238924576|ref|YP_002938092.1| DNA ligase, NAD-dependent [Eubacterium rectale ATCC 33656] gi|238876251|gb|ACR75958.1| DNA ligase, NAD-dependent [Eubacterium rectale ATCC 33656] Length = 656 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + +++ LV+ K YY D + + +D + + L L+++ D P Sbjct: 1 MENNKIKDKIDELVESLNRASKAYYNGADEIMPNYEWDAMFDELTQLEKE-TGYIRHDSP 59 Query: 114 WNTVGY 119 GY Sbjct: 60 TQNAGY 65 >gi|254371060|ref|ZP_04987062.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|151569300|gb|EDN34954.1| hypothetical protein FTBG_00816 [Francisella tularensis subsp. tularensis FSC033] Length = 643 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 20/42 (47%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 Y+ LD P+ +D YD++ L L P+ + + VG Sbjct: 2 YHTLDKPIISDSDYDKLFRLLQDLVNDNPQFKPINSVLDRVG 43 >gi|281420079|ref|ZP_06251078.1| putative DNA ligase [Prevotella copri DSM 18205] gi|281405879|gb|EFB36559.1| putative DNA ligase [Prevotella copri DSM 18205] Length = 656 Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 E +++++ LV+ YY L TD +D + ++L L+E+ E+ + P N Sbjct: 2 EEKLLQMKSLVERLNQASDSYYNGKGELMTDYEWDALFDQLKRLEEETGEIL-PNSPTNR 60 Query: 117 V 117 V Sbjct: 61 V 61 >gi|304399036|ref|ZP_07380905.1| DNA ligase (NAD(+)) [Pantoea sp. aB] gi|304353496|gb|EFM17874.1| DNA ligase (NAD(+)) [Pantoea sp. aB] Length = 583 Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 21/60 (35%), Gaps = 4/60 (6%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 + A E+ L + H YYR TD YD + +RL Q F P Sbjct: 29 TPVRATEEIGRLQQQLQHWDDAYYRQGQSPVTDTDYDALQQRLVTWQHCF----SASQPT 84 >gi|295698750|ref|YP_003603405.1| DNA ligase, NAD-dependent [Candidatus Riesia pediculicola USDA] gi|291157368|gb|ADD79813.1| DNA ligase, NAD-dependent [Candidatus Riesia pediculicola USDA] Length = 593 Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 22/53 (41%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 + K + L K HQ Y+ L D YD + +LD ++++ E Sbjct: 1 MKKKNIHQYLSSLRKKIKKHQYLYHILGKSEIPDFEYDLMIRKLDRIEKEISE 53 >gi|325261872|ref|ZP_08128610.1| DNA ligase, NAD-dependent [Clostridium sp. D5] gi|324033326|gb|EGB94603.1| DNA ligase, NAD-dependent [Clostridium sp. D5] Length = 651 Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 5/65 (7%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD--EDHPW 114 + ++ LV++ ++ Y + D + ++ YD++ + L L++ EL P Sbjct: 2 ADKKNRMQELVELLNRARRSYEQEDTEIMSNYEYDKLYDELLGLEQ---ELGTTLASSPT 58 Query: 115 NTVGY 119 VGY Sbjct: 59 INVGY 63 >gi|302526819|ref|ZP_07279161.1| DNA ligase, NAD-dependent [Streptomyces sp. AA4] gi|302435714|gb|EFL07530.1| DNA ligase, NAD-dependent [Streptomyces sp. AA4] Length = 663 Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + ++ L + + YYR P D YD + + L L E PEL + +P + V Sbjct: 2 DVRERIQELADQIVALRDAYYR-GSPAVADAEYDAIEDELRGLIEASPELAPDPNPLDQV 60 Query: 118 G 118 G Sbjct: 61 G 61 >gi|92113642|ref|YP_573570.1| NAD-dependent DNA ligase LigB [Chromohalobacter salexigens DSM 3043] gi|123387489|sp|Q1QXD7|LIGB_CHRSD RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|91796732|gb|ABE58871.1| DNA ligase (NAD+) [Chromohalobacter salexigens DSM 3043] Length = 629 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 21/64 (32%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 A ++ + + L + YYR L DG YD RL E FP Sbjct: 42 SAPPCPQMTPEAMQNDYQALDARIARWDRAYYRQGQRLVDDGTYDSAKRRLAHWAECFPL 101 Query: 107 LFDE 110 L Sbjct: 102 LAKP 105 >gi|42527046|ref|NP_972144.1| DNA ligase, NAD-dependent [Treponema denticola ATCC 35405] gi|81412203|sp|Q73MH0|DNLJ_TREDE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|41817470|gb|AAS12055.1| DNA ligase, NAD-dependent [Treponema denticola ATCC 35405] Length = 645 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 1/44 (2%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQ 103 + L K HQ YY P +D +D + + L AL Q Sbjct: 4 EKRILDLEKTIKKHQDLYYNA-QPEISDAEFDALWDELKALDPQ 46 >gi|313608254|gb|EFR84261.1| DNA ligase [Listeria monocytogenes FSL F2-208] Length = 66 Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 19/42 (45%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQ 101 E L+ I + YY +D+P D YD+ + L ++ Sbjct: 5 KKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKIE 46 >gi|261880335|ref|ZP_06006762.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270333026|gb|EFA43812.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 665 Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 ++ LV+ YY D L +D +D + ++L ++++ + D P N V Sbjct: 5 QRMQELVEQLNRASDAYYNGRDELMSDYEWDALFDKLKLIEQETGKTL-PDSPTNRV 60 >gi|301168580|emb|CBW28170.1| DNA ligase [Bacteriovorax marinus SJ] Length = 628 Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 10/59 (16%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT-VG 118 ++ L K HH+ YY D YD++ + L L D P VG Sbjct: 4 KRIQELEKEIEHHKVLYY-KGQTEIPDHEYDKLEDELREL--------SPDSPILKMVG 53 >gi|328869954|gb|EGG18329.1| BRCT domain-containing protein [Dictyostelium fasciculatum] Length = 842 Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 26/50 (52%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S+ + + +++ L + YY + + +D YD + ++L+ L++ + Sbjct: 67 SRNQLVDDIKTLRNDINKYNDLYYNKSETVISDFEYDMLFKKLETLEQLY 116 >gi|302844550|ref|XP_002953815.1| hypothetical protein VOLCADRAFT_118457 [Volvox carteri f. nagariensis] gi|300260923|gb|EFJ45139.1| hypothetical protein VOLCADRAFT_118457 [Volvox carteri f. nagariensis] Length = 1842 Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 15/43 (34%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQ 103 ++ L HH YY +D YD + + L Q Sbjct: 89 QQLRQLESALSHHNDLYYNQQRTEISDAAYDTLKLQYRQLAAQ 131 >gi|149924280|ref|ZP_01912652.1| DNA ligase, NAD-dependent [Plesiocystis pacifica SIR-1] gi|149814860|gb|EDM74426.1| DNA ligase, NAD-dependent [Plesiocystis pacifica SIR-1] Length = 706 Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 8/77 (10%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEV-----EYLVKIALHHQKWYYRLDDPLFTDGLY 90 P + ++S A V+ L + + L + Y+ L P D +Y Sbjct: 3 PTAKQVDSA---APDVSGLDTAAIEAGLPSFDADTLAALIRRTNHEYWNLHAPTIPDPVY 59 Query: 91 DRVSERLDALQEQFPEL 107 DR+ E L L P L Sbjct: 60 DRLVEGLRRLDPAHPVL 76 >gi|327395796|dbj|BAK13218.1| DNA ligase YicF [Pantoea ananatis AJ13355] Length = 589 Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 22/44 (50%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 + A+ E+ +L + K Y++ L +D YD + +RL+ Sbjct: 27 TSARAVSEIAHLQQQLRQWDKAYFQQGRSLVSDADYDSLQQRLN 70 >gi|166216282|sp|Q83G99|DNLJ_TROWT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 628 Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L + +K YY+ + L +D YD + L + D + P TVG Sbjct: 10 RRIELLTAQIIAARKAYYQENTSLMSDVEYDALEHELKDAEHA-KGFSDRNSPSLTVG 66 >gi|28572508|ref|NP_789288.1| DNA ligase [Tropheryma whipplei TW08/27] gi|81629879|sp|Q83HX4|DNLJ_TROW8 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|28410640|emb|CAD67026.1| DNA ligase [Tropheryma whipplei TW08/27] Length = 628 Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L + +K YY+ + L +D YD + L + D + P TVG Sbjct: 10 RRIELLTAQIIAARKAYYQENTSLMSDVEYDALEHELKDAEHA-KGFSDRNSPSLTVG 66 >gi|28493381|ref|NP_787542.1| DNA ligase [Tropheryma whipplei str. Twist] gi|28476422|gb|AAO44511.1| DNA ligase [Tropheryma whipplei str. Twist] Length = 634 Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 +E L + +K YY+ + L +D YD + L + D + P TVG Sbjct: 16 RRIELLTAQIIAARKAYYQENTSLMSDVEYDALEHELKDAEHA-KGFSDRNSPSLTVG 72 >gi|325474099|gb|EGC77287.1| hypothetical protein HMPREF9353_01637 [Treponema denticola F0402] Length = 437 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 1/44 (2%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQ 103 + L K HQ YY P +D +D + + L AL Q Sbjct: 4 EKRILDLEKTIKKHQDLYYNA-QPEISDAEFDALWDELKALDPQ 46 >gi|260438468|ref|ZP_05792284.1| DNA ligase, NAD-dependent [Butyrivibrio crossotus DSM 2876] gi|292809057|gb|EFF68262.1| DNA ligase, NAD-dependent [Butyrivibrio crossotus DSM 2876] Length = 649 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 4/66 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K E ++ L+ I K YY D + ++ YDR+ + L L+ + + P Sbjct: 1 MDKSE---RIKELIDILNEAGKVYYSGTDEIMSNFEYDRLYDELVELENE-TGIHMSGSP 56 Query: 114 WNTVGY 119 + VGY Sbjct: 57 TSKVGY 62 >gi|291619488|ref|YP_003522230.1| YicF [Pantoea ananatis LMG 20103] gi|291154518|gb|ADD79102.1| YicF [Pantoea ananatis LMG 20103] Length = 568 Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 22/44 (50%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 + A+ E+ +L + K Y++ L +D YD + +RL+ Sbjct: 6 TSARAVNEIAHLQQQLRQWDKAYFQQGRSLVSDADYDSLQQRLN 49 >gi|291060005|gb|ADD72740.1| DNA ligase, NAD-dependent [Treponema pallidum subsp. pallidum str. Chicago] Length = 840 Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 A V+ L K+ LHHQ YY + +D +D + E L L P L Sbjct: 21 AQRRVQELEKLILHHQDRYYNAES-DISDDAFDALWEELARLDPGNPLLKAIGSDSQR 77 >gi|15639622|ref|NP_219072.1| DNA ligase (lig) [Treponema pallidum subsp. pallidum str. Nichols] gi|189025860|ref|YP_001933632.1| DNA ligase [Treponema pallidum subsp. pallidum SS14] gi|6014987|sp|O83642|DNLJ_TREPA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|254781445|sp|B2S3M4|DNLJ_TREPS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|3322933|gb|AAC65609.1| DNA ligase (lig) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018435|gb|ACD71053.1| DNA ligase [Treponema pallidum subsp. pallidum SS14] Length = 823 Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 A V+ L K+ LHHQ YY + +D +D + E L L P L Sbjct: 4 AQRRVQELEKLILHHQDRYYNAES-DISDDAFDALWEELARLDPGNPLLKAIGSDSQR 60 >gi|225569253|ref|ZP_03778278.1| hypothetical protein CLOHYLEM_05335 [Clostridium hylemonae DSM 15053] gi|225162052|gb|EEG74671.1| hypothetical protein CLOHYLEM_05335 [Clostridium hylemonae DSM 15053] Length = 648 Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ LV+ K YY+ + + ++ YDR+ + L +L+++ + P VGY Sbjct: 1 MQELVEQLNKAGKAYYQDAEEIMSNYEYDRLYDELVSLEKEL-GITLSGSPTANVGY 56 >gi|326792059|ref|YP_004309880.1| DNA ligase, NAD-dependent [Clostridium lentocellum DSM 5427] gi|326542823|gb|ADZ84682.1| DNA ligase, NAD-dependent [Clostridium lentocellum DSM 5427] Length = 649 Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +A+ ++ LV + Y + D + ++ YD+ + L L+E+ + V Sbjct: 2 KAVERMKELVDVLGKAAYAYEQEDREVMSNYEYDKFYDELKRLEEE-TGIILAGSVTQKV 60 Query: 118 GY 119 GY Sbjct: 61 GY 62 >gi|320537878|ref|ZP_08037793.1| DNA ligase, NAD-dependent [Treponema phagedenis F0421] gi|320145297|gb|EFW36998.1| DNA ligase, NAD-dependent [Treponema phagedenis F0421] Length = 648 Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 4/42 (9%) Query: 65 YLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 L K+ +HQ YY + D +D + + L AL+ PE Sbjct: 9 ELEKLIRYHQDLYYNKEA-EIPDSEFDALWDELRALE---PE 46 >gi|297196402|ref|ZP_06913800.1| DNA ligase [Streptomyces pristinaespiralis ATCC 25486] gi|197720877|gb|EDY64785.1| DNA ligase [Streptomyces pristinaespiralis ATCC 25486] Length = 715 Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 76 WYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY + D YDR+ + A +++ P+ P V Sbjct: 34 AYYETGESTLDDDAYDRLVRGIAAYEQEHPDETSPASPTGKV 75 >gi|271965050|ref|YP_003339246.1| DNA ligase (NAD(+)) [Streptosporangium roseum DSM 43021] gi|270508225|gb|ACZ86503.1| DNA ligase (NAD(+)) [Streptosporangium roseum DSM 43021] Length = 696 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 15/41 (36%) Query: 77 YYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY D YDR+ + A + + P+ P V Sbjct: 30 YYGDGTSTLDDDAYDRLVRGIQAYEAEHPDEVLPTSPTGKV 70 >gi|320527941|ref|ZP_08029107.1| NAD-dependent DNA ligase OB-fold domain protein [Solobacterium moorei F0204] gi|320131567|gb|EFW24131.1| NAD-dependent DNA ligase OB-fold domain protein [Solobacterium moorei F0204] Length = 658 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 1/55 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + +V YY TD +D + +RL L+E+ + ED P V Sbjct: 9 MRQMVAQLNQAADAYYDGKAEQMTDYEWDALFDRLKKLEEE-TGVVLEDSPTMKV 62 >gi|257463090|ref|ZP_05627491.1| NAD-dependent DNA ligase [Fusobacterium sp. D12] gi|317060689|ref|ZP_07925174.1| DNA ligase [Fusobacterium sp. D12] gi|313686365|gb|EFS23200.1| DNA ligase [Fusobacterium sp. D12] Length = 673 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 L K + YY ++ L +D YD + + L+ L+ + ++ DE TVG Sbjct: 14 LQKKLRSYSDAYYSQNESLISDYEYDMLLKELETLEAEL-QIADETSITQTVG 65 >gi|332180951|gb|AEE16639.1| DNA ligase [Treponema brennaborense DSM 12168] Length = 646 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 4/61 (6%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL--FDED 111 + EA V+ L + +Q YY + +D +D + + L L P L D Sbjct: 1 MDLFEA-SRVQELAALIEKYQDSYYNGEA-EISDAEFDALWDELKQLDPAHPVLHRIGSD 58 Query: 112 H 112 Sbjct: 59 S 59 >gi|317499031|ref|ZP_07957312.1| DNA ligase [Lachnospiraceae bacterium 5_1_63FAA] gi|316893681|gb|EFV15882.1| DNA ligase [Lachnospiraceae bacterium 5_1_63FAA] Length = 651 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ L+ K YY+ + + ++ YD++ + L L+++ + P VGY Sbjct: 6 RMKELIHTLNEAGKAYYQQNKEVMSNLEYDKMYDELLELEKK-TNTVLSNSPTIHVGY 62 >gi|148550043|ref|YP_001270145.1| NAD-dependent DNA ligase LigB [Pseudomonas putida F1] gi|257096559|sp|A5WA01|LIGB_PSEP1 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|148514101|gb|ABQ80961.1| DNA ligase (NAD(+)) [Pseudomonas putida F1] Length = 566 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 27/60 (45%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 L +A S +A EV L + Y+R L D LYD+ ERL+ LQ+ F Sbjct: 17 LARAASCPQWSPQQAKAEVAQLRATLARWDEHYHRQGIALVADELYDQSRERLNHLQQCF 76 >gi|304372912|ref|YP_003856121.1| DNA ligase, NAD-dependent [Mycoplasma hyorhinis HUB-1] gi|304309103|gb|ADM21583.1| DNA ligase, NAD-dependent [Mycoplasma hyorhinis HUB-1] Length = 673 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED--- 111 + +A ++E L + Y+ LD P+ D +YD+ +L L++++ LF + Sbjct: 11 EEKQAKKQIEELRQKLHLWNHHYFDLDIPIVDDLVYDQELNKLKKLEKKYFYLFTLEENN 70 Query: 112 -HPWNTVG 118 P VG Sbjct: 71 ASPTQIVG 78 >gi|167766753|ref|ZP_02438806.1| hypothetical protein CLOSS21_01259 [Clostridium sp. SS2/1] gi|167711507|gb|EDS22086.1| hypothetical protein CLOSS21_01259 [Clostridium sp. SS2/1] Length = 651 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ L+ K YY+ + + ++ YD++ + L L+++ + P VGY Sbjct: 6 RMKELIHTLNEAGKAYYQQNKEVMSNLEYDKMYDELLELEKK-TNTVLSNSPTIHVGY 62 >gi|330723500|gb|AEC45870.1| DNA ligase, NAD-dependent [Mycoplasma hyorhinis MCLD] Length = 673 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED--- 111 + +A ++E L + Y+ LD P+ D +YD+ +L L++++ LF + Sbjct: 11 EEKQAKKQIEELRQKLHLWNHHYFDLDIPIVDDLVYDQELNKLKKLEKKYFYLFTLEENN 70 Query: 112 -HPWNTVG 118 P VG Sbjct: 71 ASPTQIVG 78 >gi|229593084|ref|YP_002875203.1| NAD-dependent DNA ligase LigB [Pseudomonas fluorescens SBW25] gi|257096558|sp|C3K3F7|LIGB_PSEFS RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|229364950|emb|CAY53062.1| putative exported DNA-ligase protein [Pseudomonas fluorescens SBW25] Length = 554 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE-LFDEDHP 113 EA V L + Y+RL +D LYD+ +RL + FP + P Sbjct: 24 DEARAHVSTLAEQIRQWDDSYHRLGQSPVSDELYDQARQRLAQWHQCFPAPTATPNTP 81 >gi|282858246|ref|ZP_06267432.1| NAD-dependent DNA ligase domain protein [Prevotella bivia JCVIHMP010] gi|282588955|gb|EFB94074.1| NAD-dependent DNA ligase domain protein [Prevotella bivia JCVIHMP010] Length = 678 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ + I +E LV YY TD +D +RL AL+E+ E + P Sbjct: 1 MTEDKHKI-MEALVLQLNEASDAYYNGKGEAMTDFEWDAAFDRLKALEEELGE-VLPNSP 58 Query: 114 WNTV 117 N+V Sbjct: 59 TNSV 62 >gi|328947954|ref|YP_004365291.1| DNA ligase [Treponema succinifaciens DSM 2489] gi|328448278|gb|AEB13994.1| DNA ligase [Treponema succinifaciens DSM 2489] Length = 651 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 3/75 (4%) Query: 40 ALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDA 99 L + K K ++ + L K+ +Q YY + +D +D++ + L + Sbjct: 2 ELFDVEECKKANDEALKKSSVKRISELEKLIEKYQASYYNGEA-EISDAEFDKLWDELKS 60 Query: 100 LQEQFPEL--FDEDH 112 L P L D Sbjct: 61 LDSANPILHKVGADS 75 >gi|288802753|ref|ZP_06408191.1| DNA ligase [Prevotella melaninogenica D18] gi|288334903|gb|EFC73340.1| DNA ligase [Prevotella melaninogenica D18] Length = 673 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E++ LV YY D L TD +D ++L L+E+ + D P V Sbjct: 3 KEIQSLVNQLNAASDAYYNGRDELMTDYEWDAAFDKLKKLEEE-TGIILPDSPTQNV 58 >gi|291529755|emb|CBK95341.1| NAD-dependent DNA ligase (contains BRCT domain type II) [Eubacterium rectale M104/1] Length = 709 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + ++ LV YY D + ++ +D + ++L L+E+ + D P + VG Sbjct: 5 LRMKELVNKLNEASNAYYNGKDEIMSNHEWDTMFDQLAQLEEE-TGIILPDSPTSKVG 61 >gi|256377071|ref|YP_003100731.1| DNA ligase, NAD-dependent [Actinosynnema mirum DSM 43827] gi|255921374|gb|ACU36885.1| DNA ligase, NAD-dependent [Actinosynnema mirum DSM 43827] Length = 674 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 A + L + + YYR PL D YD + L +L PEL + +P + VG Sbjct: 11 AEERIRDLADRVVSLRDAYYR-GSPLVADAEYDATEDELRSLIAANPELTPDPNPLDQVG 69 >gi|329937546|ref|ZP_08287104.1| DNA ligase [Streptomyces griseoaurantiacus M045] gi|329303422|gb|EGG47309.1| DNA ligase [Streptomyces griseoaurantiacus M045] Length = 697 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 14/42 (33%) Query: 76 WYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY D YDR+ + A + PE P V Sbjct: 21 AYYADGTSALDDEAYDRLVRGIAAWEADHPEQVLPGSPTGKV 62 >gi|315924259|ref|ZP_07920483.1| NAD-dependent DNA ligase LigA [Pseudoramibacter alactolyticus ATCC 23263] gi|315622420|gb|EFV02377.1| NAD-dependent DNA ligase LigA [Pseudoramibacter alactolyticus ATCC 23263] Length = 654 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 53 SLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDH 112 ++++ ++ L+ + YY + L ++ +D + + L L+++ D Sbjct: 2 TMAELSINQQMADLIGKINAASEAYYGGREELMSNYEWDALFDALIRLEKK-AGYALPDS 60 Query: 113 PWNTVG 118 P VG Sbjct: 61 PTQRVG 66 >gi|302345294|ref|YP_003813647.1| DNA ligase (NAD+) [Prevotella melaninogenica ATCC 25845] gi|302149440|gb|ADK95702.1| DNA ligase (NAD+) [Prevotella melaninogenica ATCC 25845] Length = 673 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E++ LV YY D L TD +D ++L L+E+ + D P V Sbjct: 3 KEIQSLVNQLNAASDAYYNGRDELMTDYEWDAAFDKLKKLEEE-TGIILPDSPTQNV 58 >gi|315608256|ref|ZP_07883246.1| NAD-dependent DNA ligase LigA [Prevotella buccae ATCC 33574] gi|315250037|gb|EFU30036.1| NAD-dependent DNA ligase LigA [Prevotella buccae ATCC 33574] Length = 662 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 2/64 (3%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 +++ + ++ V+ YY L TD +D + +RL L+E+ E D P Sbjct: 1 MTEDK-RQQMRQFVERLNAASDAYYNGQPELMTDYEWDALFDRLRQLEEETGETL-PDSP 58 Query: 114 WNTV 117 V Sbjct: 59 TAKV 62 >gi|168186072|ref|ZP_02620707.1| DNA ligase, NAD-dependent [Clostridium botulinum C str. Eklund] gi|169295952|gb|EDS78085.1| DNA ligase, NAD-dependent [Clostridium botulinum C str. Eklund] Length = 664 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 65 YLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV+ YY LD+P +D YD+ ++L L+++ L P VG Sbjct: 10 ELVEELNKLAYEYYVLDNPSVSDKDYDKKYDKLVELEKE-TGLVLPYSPTQRVG 62 >gi|242241341|ref|YP_002989522.1| NAD-dependent DNA ligase LigB [Dickeya dadantii Ech703] gi|242133398|gb|ACS87700.1| DNA ligase (NAD(+)) [Dickeya dadantii Ech703] Length = 575 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 20/46 (43%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 A E+E L + YY + D YD++ +RL+ Q F Sbjct: 34 AEQEMERLGHQLAVWDRAYYGAGESQIDDHTYDQLRKRLETWQACF 79 >gi|118444950|ref|YP_878905.1| NAD-dependent DNA ligase LigA [Clostridium novyi NT] gi|166215579|sp|A0Q2Q3|DNLJ_CLONN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|118135406|gb|ABK62450.1| DNA ligase, NAD-dependent [Clostridium novyi NT] Length = 664 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 65 YLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 LV+ YY LD+P +D YD+ ++L L+++ L P VG Sbjct: 10 ELVEELNKLAYEYYVLDNPSVSDKDYDKKYDKLVELEKE-TGLVLPYSPTQRVG 62 >gi|317502616|ref|ZP_07960737.1| NAD-dependent DNA ligase LigA [Prevotella salivae DSM 15606] gi|315666297|gb|EFV05843.1| NAD-dependent DNA ligase LigA [Prevotella salivae DSM 15606] Length = 665 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 9/59 (15%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQ----EQFPELFDEDHPWNTV 117 + LV YY +D +D + + + L+ +QFP D P N V Sbjct: 9 MRELVDKLNSAANAYYNGQGEQMSDYEWDALFDEVKHLEKETGQQFP-----DSPTNRV 62 >gi|227874422|ref|ZP_03992603.1| DNA ligase (NAD(+)) [Oribacterium sinus F0268] gi|227839738|gb|EEJ50187.1| DNA ligase (NAD(+)) [Oribacterium sinus F0268] Length = 692 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 40/91 (43%), Gaps = 1/91 (1%) Query: 29 TLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDG 88 +L +K + S +++ + K +++ ++ L+ K YY+ + ++ Sbjct: 11 SLGSKRISMGSQENSKIEENSGLQEADKQDSIARMKELISFLNEAAKAYYQEGREIVSNL 70 Query: 89 LYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 YD+ + L +L+++ + P VGY Sbjct: 71 EYDKAYDTLLSLEKE-SGVVLSGSPSQNVGY 100 >gi|260588405|ref|ZP_05854318.1| DNA ligase, NAD-dependent [Blautia hansenii DSM 20583] gi|260541279|gb|EEX21848.1| DNA ligase, NAD-dependent [Blautia hansenii DSM 20583] Length = 644 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 M E+ +++ YY+ + ++ YD++ ++L ++++ + D P +V Sbjct: 1 MNEMRAIIEQLKAANVAYYQESREIMSNYDYDKLYDKLVDMEKE-TGVIYSDSPTQSV 57 >gi|170719684|ref|YP_001747372.1| NAD-dependent DNA ligase LigB [Pseudomonas putida W619] gi|257096560|sp|B1J2Z7|LIGB_PSEPW RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|169757687|gb|ACA71003.1| DNA ligase (NAD(+)) [Pseudomonas putida W619] Length = 567 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 25/59 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 S +A EV L + Y+R L D LYD+ L LQ+ F + F + P Sbjct: 27 STKQARTEVAQLRATLANWDDHYHRQGIALVADELYDQARHHLLHLQQCFGQEFTDPSP 85 >gi|281424041|ref|ZP_06254954.1| putative DNA ligase [Prevotella oris F0302] gi|281401824|gb|EFB32655.1| putative DNA ligase [Prevotella oris F0302] Length = 665 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 9/65 (13%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQ----EQFPELFDEDH 112 + + ++ LV + YY L TD +D + +++ L+ ++FP D Sbjct: 3 EDKLRKMRELVDLLNRAADAYYNGQGELMTDYEWDAMFDQVKQLETETGQKFP-----DS 57 Query: 113 PWNTV 117 P N V Sbjct: 58 PTNRV 62 >gi|242279308|ref|YP_002991437.1| DNA ligase (NAD(+)) [Desulfovibrio salexigens DSM 2638] gi|242122202|gb|ACS79898.1| DNA ligase (NAD(+)) [Desulfovibrio salexigens DSM 2638] Length = 614 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL--FDEDHPWNTV 117 E++ LV + H + Y R P +D YD ++E+L L + P L + ++ V Sbjct: 6 KEIKDLVALLEKHNEAY-RRGMPTISDARYDELTEQLRDLDPENPFLTNVEPENFSEKV 63 >gi|282877678|ref|ZP_06286493.1| NAD-dependent DNA ligase domain protein [Prevotella buccalis ATCC 35310] gi|281300250|gb|EFA92604.1| NAD-dependent DNA ligase domain protein [Prevotella buccalis ATCC 35310] Length = 657 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 1/58 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +++ LV+ YY TD +D + L L+++ L D P V Sbjct: 6 RQKMQQLVEELNRASDNYYSGRTESMTDFEWDAKFDELKRLEQE-SGLVLPDSPTTNV 62 >gi|156936180|ref|YP_001440096.1| NAD-dependent DNA ligase LigB [Cronobacter sakazakii ATCC BAA-894] gi|166226363|sp|A7MQB5|LIGB_ENTS8 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|156534434|gb|ABU79260.1| hypothetical protein ESA_04079 [Cronobacter sakazakii ATCC BAA-894] Length = 561 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 24/59 (40%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + +A EV L + Y+ + +D +YD + +RL A Q F D P Sbjct: 25 TPQQAQQEVAALENQLTRWDEAYWLHGENKVSDAVYDSMRQRLRAWQTCFALPVFNDAP 83 >gi|260591596|ref|ZP_05857054.1| putative DNA ligase [Prevotella veroralis F0319] gi|260536396|gb|EEX19013.1| putative DNA ligase [Prevotella veroralis F0319] Length = 676 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 E++ LV+ YY + + T+ +D +RL L+E+ + D P V Sbjct: 4 EIQSLVEQLNAASDAYYNGREEIMTNYEWDAAFDRLKKLEEE-TGIILPDSPTQNV 58 >gi|299142918|ref|ZP_07036045.1| DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) [Prevotella oris C735] gi|298575647|gb|EFI47526.1| DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) [Prevotella oris C735] Length = 657 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 9/59 (15%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQ----EQFPELFDEDHPWNTV 117 + L+ + YY L TD +D + +++ L+ ++FP D P N V Sbjct: 1 MRELIDLLNRAADAYYNGQGELMTDYEWDAMFDQVKQLETETGQKFP-----DSPTNRV 54 >gi|126347877|emb|CAJ89597.1| putative DNA ligase [Streptomyces ambofaciens ATCC 23877] Length = 702 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 15/33 (45%) Query: 85 FTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 D YDR++ + A + + P+ D P V Sbjct: 39 LDDATYDRLARGIAAWEAEHPDEVLPDSPTGKV 71 >gi|326201860|ref|ZP_08191730.1| DNA ligase, NAD-dependent [Clostridium papyrosolvens DSM 2782] gi|325987655|gb|EGD48481.1| DNA ligase, NAD-dependent [Clostridium papyrosolvens DSM 2782] Length = 657 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ ++I K YY+ + + + YD++ + L L+++ + + P VGY Sbjct: 8 MKDKIEILNKAAKAYYQENTEIMPNIEYDKLYDELLELEKE-TGVVLSNSPSIHVGY 63 >gi|331092462|ref|ZP_08341286.1| DNA ligase [Lachnospiraceae bacterium 2_1_46FAA] gi|330401202|gb|EGG80794.1| DNA ligase [Lachnospiraceae bacterium 2_1_46FAA] Length = 653 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ L+ + K YY+ + ++ YD++ + L L+++ + + P VGY Sbjct: 5 KKRMQELIALLNEAGKAYYQGATEIMSNFQYDKLYDELAELEKEL-NVTLSNSPTVNVGY 63 >gi|220929395|ref|YP_002506304.1| DNA ligase, NAD-dependent [Clostridium cellulolyticum H10] gi|254781296|sp|B8I3I1|DNLJ_CLOCE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|219999723|gb|ACL76324.1| DNA ligase, NAD-dependent [Clostridium cellulolyticum H10] Length = 657 Score = 44.5 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ ++I K YY+ + + ++ YD++ + L L+++ + + P VGY Sbjct: 8 MKDKIEILDRAAKAYYQENTEIMSNIEYDKLYDELLELEKE-TGVVLSNSPSIHVGY 63 >gi|271502618|ref|YP_003335644.1| DNA ligase [Dickeya dadantii Ech586] gi|270346173|gb|ACZ78938.1| DNA ligase (NAD(+)) [Dickeya dadantii Ech586] Length = 561 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 20/51 (39%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 KA+ + S A E+ L + YY D +YD++ + L Sbjct: 20 KAEPCPAWSPARAEQEIARLGQQLTQWDNAYYDRGQSPVDDQVYDQLRQTL 70 >gi|313500944|gb|ADR62310.1| LigB [Pseudomonas putida BIRD-1] Length = 566 Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 24/50 (48%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + +A EV L + Y+R L D LYD+ ERL+ LQ+ F Sbjct: 27 NPQQAEAEVAQLRATLARWDEHYHRQGIALVADELYDQSRERLNHLQQCF 76 >gi|326775447|ref|ZP_08234712.1| DNA ligase, NAD-dependent [Streptomyces cf. griseus XylebKG-1] gi|326655780|gb|EGE40626.1| DNA ligase, NAD-dependent [Streptomyces cf. griseus XylebKG-1] Length = 712 Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 14/33 (42%) Query: 85 FTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 D YDR++ + A + PE D P V Sbjct: 39 LDDDAYDRLARGIAAYEADHPEEVLADSPTGKV 71 >gi|182434930|ref|YP_001822649.1| putative NAD-dependent DNA ligase [Streptomyces griseus subsp. griseus NBRC 13350] gi|254778149|sp|B1VUC2|DNLJ1_STRGG RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 1 gi|178463446|dbj|BAG17966.1| putative NAD-dependent DNA ligase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 719 Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 14/33 (42%) Query: 85 FTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 D YDR++ + A + PE D P V Sbjct: 46 LDDDAYDRLARGIAAYEADHPEEVLADSPTGKV 78 >gi|288870885|ref|ZP_06115627.2| DNA ligase, NAD-dependent [Clostridium hathewayi DSM 13479] gi|288865557|gb|EFC97855.1| DNA ligase, NAD-dependent [Clostridium hathewayi DSM 13479] Length = 645 Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 K YY+ + ++ YD++ + L L+++ + P +VGY Sbjct: 13 KTYYQESREIMSNYEYDKLYDELAELEKE-TGVVLSKSPTQSVGY 56 >gi|283787721|ref|YP_003367586.1| putative DNA ligase [Citrobacter rodentium ICC168] gi|282951175|emb|CBG90867.1| putative DNA ligase [Citrobacter rodentium ICC168] Length = 560 Score = 43.3 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 18/43 (41%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 S A E+ L + Y++ DG+YD++ RL Sbjct: 25 SSARAQEEISRLRQQIARWDDDYWKKGKSAIEDGVYDQLRTRL 67 >gi|288925794|ref|ZP_06419725.1| DNA ligase [Prevotella buccae D17] gi|288337449|gb|EFC75804.1| DNA ligase [Prevotella buccae D17] Length = 654 Score = 43.3 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 1/55 (1%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + V+ YY L TD +D + +RL L+E+ E D P V Sbjct: 1 MRQFVERLNAASDAYYNGQPELMTDYEWDALFDRLRQLEEETGETL-PDSPTAKV 54 >gi|325271326|ref|ZP_08137858.1| NAD-dependent DNA ligase LigB [Pseudomonas sp. TJI-51] gi|324103542|gb|EGC00857.1| NAD-dependent DNA ligase LigB [Pseudomonas sp. TJI-51] Length = 562 Score = 43.3 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 22/50 (44%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + + EV L K Y+R L D LYD+ +RL LQ+ F Sbjct: 27 NPQQVASEVAQLRKTLGSWDDHYHRQGIALVPDELYDQSRQRLAQLQQCF 76 >gi|251791698|ref|YP_003006419.1| NAD-dependent DNA ligase LigB [Dickeya zeae Ech1591] gi|247540319|gb|ACT08940.1| DNA ligase (NAD(+)) [Dickeya zeae Ech1591] Length = 560 Score = 43.3 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 22/64 (34%) Query: 41 LESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 L S A + S A EV L + YY D +YD++ + L Sbjct: 13 LVSGFANATPCPAWSSARAEREVTQLGQQLTQWDNAYYEQGRSPVDDQVYDQLRQTLATW 72 Query: 101 QEQF 104 Q F Sbjct: 73 QRCF 76 >gi|256829851|ref|YP_003158579.1| DNA ligase (NAD(+)) [Desulfomicrobium baculatum DSM 4028] gi|256579027|gb|ACU90163.1| DNA ligase (NAD(+)) [Desulfomicrobium baculatum DSM 4028] Length = 615 Score = 42.9 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 1/49 (2%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 E LV+ + Y R PL D YD + RL L P L Sbjct: 9 SEAHRLVERLAEYNDAY-RRGAPLVGDAQYDLLLARLRELDPDHPFLHR 56 >gi|159487072|ref|XP_001701559.1| predicted protein [Chlamydomonas reinhardtii] gi|158271500|gb|EDO97317.1| predicted protein [Chlamydomonas reinhardtii] Length = 623 Score = 42.9 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 1/49 (2%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ L H++ Y+ P +D YD + R L + + ED Sbjct: 1 MKLLEAALTKHRELYFNQ-TPEISDAAYDELKRRFRDLAARLRGVAAED 48 >gi|289767058|ref|ZP_06526436.1| DNA ligase, NAD-dependent [Streptomyces lividans TK24] gi|289697257|gb|EFD64686.1| DNA ligase, NAD-dependent [Streptomyces lividans TK24] Length = 703 Score = 42.9 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 15/33 (45%) Query: 85 FTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 D YDR++ + A + + P+ D P V Sbjct: 43 LDDDAYDRLARGIAAWEAEHPDEVLPDSPTGKV 75 >gi|256783179|ref|ZP_05521610.1| DNA ligase [Streptomyces lividans TK24] Length = 690 Score = 42.9 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 15/33 (45%) Query: 85 FTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 D YDR++ + A + + P+ D P V Sbjct: 30 LDDDAYDRLARGIAAWEAEHPDEVLPDSPTGKV 62 >gi|166215594|sp|Q93IZ8|DNLJ2_STRCO RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] 2 Length = 700 Score = 42.9 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 15/33 (45%) Query: 85 FTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 D YDR++ + A + + P+ D P V Sbjct: 40 LDDDAYDRLARGIAAWEAEHPDEVLPDSPTGKV 72 >gi|21225788|ref|NP_631567.1| DNA ligase [Streptomyces coelicolor A3(2)] gi|14495032|emb|CAC42149.1| putative DNA ligase [Streptomyces coelicolor A3(2)] Length = 723 Score = 42.9 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 15/33 (45%) Query: 85 FTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 D YDR++ + A + + P+ D P V Sbjct: 63 LDDDAYDRLARGIAAWEAEHPDEVLPDSPTGKV 95 >gi|268610246|ref|ZP_06143973.1| DNA ligase, NAD-dependent [Ruminococcus flavefaciens FD-1] Length = 685 Score = 42.9 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 36/86 (41%), Gaps = 5/86 (5%) Query: 37 NKRALESWLD---KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRV 93 NK+ + S D KA ++ + + ++ L ++ YY + +D YD + Sbjct: 15 NKQPINSAADFITKATPPKEVNMDK-INRMKELNELLAKAADSYYNTGVEIMSDHEYDEL 73 Query: 94 SERLDALQEQFPELFDEDHPWNTVGY 119 + L+ L+++ + VG+ Sbjct: 74 YDELEKLEKE-TGVILNGSRTQQVGF 98 >gi|26991646|ref|NP_747071.1| NAD-dependent DNA ligase LigB [Pseudomonas putida KT2440] gi|81439525|sp|Q88D59|LIGB_PSEPK RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|24986741|gb|AAN70535.1|AE016695_9 DNA ligase, NAD-dependent, putative [Pseudomonas putida KT2440] Length = 566 Score = 42.9 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 24/50 (48%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + +A EV L + Y+R L D LYD+ ERL+ LQ+ F Sbjct: 27 NPQQAKAEVAQLRATLARWDEHYHRQGIALVADELYDQSHERLNHLQQCF 76 >gi|297196946|ref|ZP_06914343.1| DNA ligase, NAD-dependent [Streptomyces sviceus ATCC 29083] gi|297146537|gb|EDY59948.2| DNA ligase, NAD-dependent [Streptomyces sviceus ATCC 29083] Length = 712 Score = 42.9 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 15/42 (35%) Query: 76 WYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY D YDR+ + A + P+ + P V Sbjct: 45 AYYEGGTSALDDDAYDRLVRGIAAWETDHPDQVLPNSPTGKV 86 >gi|257458169|ref|ZP_05623323.1| DNA ligase, NAD-dependent [Treponema vincentii ATCC 35580] gi|257444463|gb|EEV19552.1| DNA ligase, NAD-dependent [Treponema vincentii ATCC 35580] Length = 641 Score = 42.9 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQ 103 ++ L + HQ YY +P +D +D + + L +L Q Sbjct: 6 RIQELEALIKKHQNLYYNA-EPEISDADFDMLWDELRSLDPQ 46 >gi|290962622|ref|YP_003493804.1| DNA ligase [Streptomyces scabiei 87.22] gi|260652148|emb|CBG75280.1| putative DNA ligase [Streptomyces scabiei 87.22] Length = 704 Score = 42.9 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 18/58 (31%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 V+ A+ YY D YDR+ + + PE + P V Sbjct: 21 AAAYAQAVEDAVRASAAYYTGGTSALDDDTYDRLVRGIAVWEAAHPEQVLPESPTGKV 78 >gi|282881715|ref|ZP_06290378.1| DNA ligase domain protein [Prevotella timonensis CRIS 5C-B1] gi|281304474|gb|EFA96571.1| DNA ligase domain protein [Prevotella timonensis CRIS 5C-B1] Length = 655 Score = 42.9 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 1/60 (1%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 + + LV YY L TD +D + + L L+ + D P N V Sbjct: 2 DIQQRMRKLVDKLNLASDNYYGGKPELMTDYEWDALFDELKQLEMS-SGVVLPDSPTNRV 60 >gi|104783946|ref|YP_610444.1| NAD-dependent DNA ligase LigB [Pseudomonas entomophila L48] gi|123255217|sp|Q1I3X5|LIGB_PSEE4 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|95112933|emb|CAK17661.1| putative DNA ligase, NAD-dependent [Pseudomonas entomophila L48] Length = 557 Score = 42.5 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 1/70 (1%) Query: 44 WLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQ 103 L + A EV L+K H Y+R L D LYD+ + L LQ Sbjct: 16 ALADHRPCPDWPAQRARAEVSQLLKTLSHWDDHYHRQGVALVADELYDQSRQHLRHLQGC 75 Query: 104 FPELFDEDHP 113 F +L D P Sbjct: 76 F-DLASNDAP 84 >gi|302538378|ref|ZP_07290720.1| DNA ligase, NAD-dependent [Streptomyces sp. C] gi|302447273|gb|EFL19089.1| DNA ligase, NAD-dependent [Streptomyces sp. C] Length = 699 Score = 42.5 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 22/68 (32%), Gaps = 3/68 (4%) Query: 53 SLSKGEAMIEVEYLVKIAL---HHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 +++ A+ + + YY D +D + + A + +PE D Sbjct: 16 TITTASALADRDEYADAIATAVKASAAYYGSGGSPLDDASFDLLVSLIQAYEAAYPEHVD 75 Query: 110 EDHPWNTV 117 P V Sbjct: 76 PASPTGKV 83 >gi|32491184|ref|NP_871438.1| hypothetical protein WGLp435 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|81741654|sp|Q8D2B9|DNLJ_WIGBR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|25166391|dbj|BAC24581.1| lig [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 591 Score = 42.5 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 20/47 (42%) Query: 58 EAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + ++ L K YY + L +D YD L+ L++++ Sbjct: 9 KIKTKILNLRKKIEMWNNNYYVKNLSLVSDEKYDSTLFELNELEKKY 55 >gi|330501400|ref|YP_004378269.1| NAD-dependent DNA ligase LigB [Pseudomonas mendocina NK-01] gi|328915686|gb|AEB56517.1| NAD-dependent DNA ligase LigB [Pseudomonas mendocina NK-01] Length = 564 Score = 42.5 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 24/58 (41%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 A+ + + A +E+ L + Y+ L D +YD+ RL A + FP Sbjct: 17 AEPCPNWADARAAMELGALSRQIAEWDDAYHNQGHSLVADEIYDQARGRLQAWHQCFP 74 >gi|255019090|ref|ZP_05291216.1| NAD-dependent DNA ligase LigA [Listeria monocytogenes FSL F2-515] Length = 99 Score = 42.5 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 7/25 (28%), Positives = 11/25 (44%) Query: 94 SERLDALQEQFPELFDEDHPWNTVG 118 + L ++E PE + P VG Sbjct: 1 MQELLKIEEAHPEWVTPESPSKRVG 25 >gi|320007473|gb|ADW02323.1| DNA ligase, NAD-dependent [Streptomyces flavogriseus ATCC 33331] Length = 698 Score = 42.2 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 15/34 (44%) Query: 84 LFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 D YDR+ + A +E+ P+ + P V Sbjct: 36 TLDDDAYDRLVRAIAAYEEEHPQEVLDASPTGKV 69 >gi|260599943|ref|YP_003212514.1| NAD-dependent DNA ligase LigB [Cronobacter turicensis z3032] gi|260219120|emb|CBA34475.1| DNA ligase B [Cronobacter turicensis z3032] Length = 550 Score = 42.2 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 20/44 (45%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 + +A EV L + Y+ + +D +YD + +RL+ Sbjct: 14 TSEQARQEVAALESQLARWDEAYWLRGENNVSDAVYDGMRQRLN 57 >gi|323975134|gb|EGB70239.1| NAD-dependent DNA ligase adenylation domain-containing protein [Escherichia coli TW10509] Length = 560 Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 22/50 (44%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ + DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGESEIEDGVYDQLSARLTQWQRCF 75 >gi|323965913|gb|EGB61361.1| NAD-dependent DNA ligase adenylation domain-containing protein [Escherichia coli M863] Length = 562 Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 22/50 (44%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ + DG+YD++S RL Q F Sbjct: 28 SPARAQEEISRLQQQIKQWDDDYWKEGESEIEDGVYDQLSARLTQWQRCF 77 >gi|191170589|ref|ZP_03032142.1| NAD-dependent DNA ligase adenylation domain [Escherichia coli F11] gi|190909397|gb|EDV68983.1| NAD-dependent DNA ligase adenylation domain [Escherichia coli F11] Length = 562 Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 22/50 (44%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ + DG+YD++S RL Q F Sbjct: 28 SPARAQEEISRLQQQIKQWDDDYWKEGESEIEDGVYDQLSARLTQWQRCF 77 >gi|110643888|ref|YP_671618.1| NAD-dependent DNA ligase LigB [Escherichia coli 536] gi|300983472|ref|ZP_07176619.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 200-1] gi|110345480|gb|ABG71717.1| hypothetical DNA ligase-like protein YicF [Escherichia coli 536] gi|300306936|gb|EFJ61456.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 200-1] gi|324012718|gb|EGB81937.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 60-1] Length = 561 Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 22/50 (44%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ + DG+YD++S RL Q F Sbjct: 27 SPARAQEEISRLQQQIKQWDDDYWKEGESEIEDGVYDQLSARLTQWQRCF 76 >gi|166226371|sp|Q0TBG2|LIGB_ECOL5 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B Length = 560 Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 22/50 (44%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ + DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGESEIEDGVYDQLSARLTQWQRCF 75 >gi|229587518|ref|YP_002860556.1| hypothetical protein CLJ_0249 [Clostridium botulinum Ba4 str. 657] gi|229260200|gb|ACQ51237.1| hypothetical protein CLJ_0249 [Clostridium botulinum Ba4 str. 657] Length = 125 Score = 42.2 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 55 SKGEAMIEV-EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 + +A+IE+ + L H YYRL+D L D YD+ + L+ LQ+ +P+L Sbjct: 28 THKKAIIELINKRRRQVLVHSCTYYRLNDSLIDDYTYDKWARELENLQDMYPDLL 82 >gi|294783065|ref|ZP_06748389.1| DNA ligase, NAD-dependent [Fusobacterium sp. 1_1_41FAA] gi|294479943|gb|EFG27720.1| DNA ligase, NAD-dependent [Fusobacterium sp. 1_1_41FAA] Length = 696 Score = 42.2 bits (98), Expect = 0.027, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 31/58 (53%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + ++ YY ++ L +D +D + + L++L+E++PE + P +VG Sbjct: 29 ERIVKLKEDLDKYRDSYYNDNESLISDYEFDILLKELESLEEKYPEYKEASSPTESVG 86 >gi|312963566|ref|ZP_07778047.1| DNA ligase B [Pseudomonas fluorescens WH6] gi|311282075|gb|EFQ60675.1| DNA ligase B [Pseudomonas fluorescens WH6] Length = 553 Score = 41.8 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 39 RALESWLDKAKKVTSLSK---GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 R L ++L A + SL++ +A ++ L + Y+RL +D LYD+ + Sbjct: 2 RLLIAFLLYAVPLWSLAQNCPEDARTQIHELAEQVRLWDDSYHRLGQSPVSDELYDQARQ 61 Query: 96 RL 97 RL Sbjct: 62 RL 63 >gi|91094259|ref|XP_969448.1| PREDICTED: similar to protein-O-xylosyltransferase [Tribolium castaneum] gi|270016288|gb|EFA12734.1| hypothetical protein TcasGA2_TC002371 [Tribolium castaneum] Length = 873 Score = 41.8 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 8/79 (10%) Query: 33 KFLPNKRALES--WLDKAKKVTSLS-KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGL 89 KF+P ES + K V L+ G A+ +V+ L+KI H + +YY D Sbjct: 233 KFVPQVANTESPPSHENVKIVFLLTLNGRALRQVKRLLKILYHTRHFYYIH-----VDVR 287 Query: 90 YDRVSERLDALQEQFPELF 108 D + L L+ +FP + Sbjct: 288 EDYLFRELLPLERRFPNIR 306 >gi|70733074|ref|YP_262847.1| NAD-dependent DNA ligase LigB [Pseudomonas fluorescens Pf-5] gi|123761963|sp|Q4K4I6|LIGB_PSEF5 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|68347373|gb|AAY94979.1| DNA ligase, NAD-dependent, putative [Pseudomonas fluorescens Pf-5] Length = 556 Score = 41.8 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE-DHP 113 A E+ L + YYR L D LYD+ +RL ++ FP+ D P Sbjct: 28 ATDEITALQQQLQRWDSSYYRDGRSLVADELYDQARQRLLTWRQCFPQAPRAMDQP 83 >gi|265763497|ref|ZP_06092065.1| NAD-dependent DNA ligase [Bacteroides sp. 2_1_16] gi|263256105|gb|EEZ27451.1| NAD-dependent DNA ligase [Bacteroides sp. 2_1_16] Length = 652 Score = 41.8 bits (97), Expect = 0.035, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 L+ + H K Y R+ P +D YD E L L Sbjct: 13 LLDMIKRHNKMY-RMGAPEISDAEYDAEIELLKTL 46 >gi|270265241|ref|ZP_06193503.1| DNA ligase B [Serratia odorifera 4Rx13] gi|270040875|gb|EFA13977.1| DNA ligase B [Serratia odorifera 4Rx13] Length = 567 Score = 41.4 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 17/39 (43%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 +E+ L YY+ D L D +YD + ++L Sbjct: 36 QLEITALKNQLERWDVAYYQQGDSLIEDQVYDSLRQKLQ 74 >gi|146305490|ref|YP_001185955.1| NAD-dependent DNA ligase LigB [Pseudomonas mendocina ymp] gi|172046035|sp|A4XPF7|LIGB_PSEMY RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|145573691|gb|ABP83223.1| DNA ligase (NAD(+)) [Pseudomonas mendocina ymp] Length = 562 Score = 41.4 bits (96), Expect = 0.044, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 23/64 (35%) Query: 41 LESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 L + +A+ A +E L + Y+ D LYD+ ERL Sbjct: 12 LLPLIAQAEPCPDWPDSRAQVEFAALSQQIAQWDDAYHNQGRSPIADELYDQARERLQRW 71 Query: 101 QEQF 104 Q+ F Sbjct: 72 QQCF 75 >gi|262066346|ref|ZP_06025958.1| DNA ligase, NAD-dependent [Fusobacterium periodonticum ATCC 33693] gi|291379910|gb|EFE87428.1| DNA ligase, NAD-dependent [Fusobacterium periodonticum ATCC 33693] Length = 696 Score = 41.4 bits (96), Expect = 0.046, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 31/58 (53%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + L + ++ YY ++ L +D +D + + L++L+E++PE + P +VG Sbjct: 29 ERIVKLKEDLDKYRDSYYNDNESLISDYEFDILLKELESLEEKYPEYKEASSPTASVG 86 >gi|302562478|ref|ZP_07314820.1| DNA ligase, NAD-dependent [Streptomyces griseoflavus Tu4000] gi|302480096|gb|EFL43189.1| DNA ligase, NAD-dependent [Streptomyces griseoflavus Tu4000] Length = 533 Score = 41.4 bits (96), Expect = 0.047, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 14/42 (33%) Query: 76 WYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 YY D YDR+ + + + P+ P V Sbjct: 21 AYYGGGTSALDDDAYDRLVRGIADWEAEHPDAILPGSPTGKV 62 >gi|312967984|ref|ZP_07782195.1| NAD-dependent DNA ligase adenylation domain protein [Escherichia coli 2362-75] gi|312287243|gb|EFR15152.1| NAD-dependent DNA ligase adenylation domain protein [Escherichia coli 2362-75] Length = 561 Score = 41.0 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 22/52 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 S A E+ L + Y++ DG+YD++S RL Q F E Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGE 77 >gi|293413081|ref|ZP_06655749.1| DNA ligase [Escherichia coli B354] gi|291468728|gb|EFF11221.1| DNA ligase [Escherichia coli B354] Length = 561 Score = 41.0 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 22/52 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 S A E+ L + Y++ DG+YD++S RL Q F E Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGE 77 >gi|215488942|ref|YP_002331373.1| NAD-dependent DNA ligase LigB [Escherichia coli O127:H6 str. E2348/69] gi|254809143|sp|B7UM69|LIGB_ECO27 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|215267014|emb|CAS11459.1| conserved inner membrane protein [Escherichia coli O127:H6 str. E2348/69] Length = 561 Score = 41.0 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 22/52 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 S A E+ L + Y++ DG+YD++S RL Q F E Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGE 77 >gi|330813743|ref|YP_004357982.1| DNA ligase [Candidatus Pelagibacter sp. IMCC9063] gi|327486838|gb|AEA81243.1| DNA ligase [Candidatus Pelagibacter sp. IMCC9063] Length = 672 Score = 41.0 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 13/26 (50%) Query: 68 KIALHHQKWYYRLDDPLFTDGLYDRV 93 K+ + YY D P TDG YD + Sbjct: 13 KLLNQYDHNYYETDSPKITDGEYDEI 38 >gi|300728177|ref|ZP_07061548.1| putative DNA ligase [Prevotella bryantii B14] gi|299774603|gb|EFI71224.1| putative DNA ligase [Prevotella bryantii B14] Length = 705 Score = 41.0 bits (95), Expect = 0.055, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 + ++E+ V + YY + TD +D + +RL L+++ + E+ P + Sbjct: 3 EDKILEMRKAVDLLNRAADAYYNGQAEIMTDYEWDALFDRLKVLEQE-TGVILEESPIHH 61 Query: 117 V 117 V Sbjct: 62 V 62 >gi|172044492|sp|A8A6A9|LIGB_ECOHS RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B Length = 560 Score = 41.0 bits (95), Expect = 0.057, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDVYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|157163128|ref|YP_001460446.1| NAD-dependent DNA ligase LigB [Escherichia coli HS] gi|157068808|gb|ABV08063.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli HS] Length = 562 Score = 41.0 bits (95), Expect = 0.057, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEISRLQQQIKQWDDVYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|50119005|ref|YP_048172.1| NAD-dependent DNA ligase LigB [Pectobacterium atrosepticum SCRI1043] gi|81827264|sp|Q6DB58|LIGB_ERWCT RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|49609531|emb|CAG72964.1| putative DNA ligase [Pectobacterium atrosepticum SCRI1043] Length = 563 Score = 40.6 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 20/50 (40%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 A E++ L + YY D +YD++ E+L+ + F Sbjct: 31 DNTRASKEIDALRQQLEQWDDVYYTEGKSPIEDDVYDQLREQLNQWSQCF 80 >gi|311277433|ref|YP_003939664.1| DNA ligase (NAD(+)) [Enterobacter cloacae SCF1] gi|308746628|gb|ADO46380.1| DNA ligase (NAD(+)) [Enterobacter cloacae SCF1] Length = 556 Score = 40.6 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 22/55 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDE 110 +A E+ L + Y+R +D +YD++S RL Q F + Sbjct: 25 PAKAEQEMAALNAQLTRWSEAYWREGASAVSDEVYDQLSARLKQWQRCFSQERTA 79 >gi|237738042|ref|ZP_04568523.1| NAD-dependent DNA ligase [Fusobacterium mortiferum ATCC 9817] gi|229419922|gb|EEO34969.1| NAD-dependent DNA ligase [Fusobacterium mortiferum ATCC 9817] Length = 663 Score = 40.6 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 29/53 (54%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 + + + +YY ++ L +D +D++ L L+E++PE +++ P VG Sbjct: 1 MREKIKKYSDYYYTNNESLISDVEFDKLLVELKELEEKYPEYKEKNSPTEIVG 53 >gi|303237245|ref|ZP_07323815.1| NAD-dependent DNA ligase domain protein [Prevotella disiens FB035-09AN] gi|302482632|gb|EFL45657.1| NAD-dependent DNA ligase domain protein [Prevotella disiens FB035-09AN] Length = 655 Score = 40.6 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 1/58 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 M + LV YY + + +D +D + L L+E+ D P V Sbjct: 6 MTHMRELVDKLNEASNTYYNGQNEIMSDHEWDAAFDELKHLEEE-TGTILPDSPTANV 62 >gi|323189446|gb|EFZ74727.1| NAD-dependent DNA ligase adenylation domain protein [Escherichia coli RN587/1] Length = 561 Score = 40.6 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 22/52 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 S A E+ L + Y++ DG+YD++S RL Q F E Sbjct: 26 SSARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGE 77 >gi|295095236|emb|CBK84326.1| NAD-dependent DNA ligase (contains BRCT domain type II) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 556 Score = 40.6 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S +A E+ L Y++ +D +YDR++ RL Q F Sbjct: 24 SPAKAGQEIAALKAQLTRWNDDYWKQGSSEVSDDVYDRLNARLKQWQRCF 73 >gi|307128799|ref|YP_003880815.1| DNA ligase [Dickeya dadantii 3937] gi|306526328|gb|ADM96258.1| DNA ligase [Dickeya dadantii 3937] Length = 561 Score = 40.6 bits (94), Expect = 0.071, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 21/55 (38%) Query: 43 SWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 S L +A + S A E+ L + YY D +YD++ + L Sbjct: 16 SGLAEAASCPAWSSTRAEQEITQLGQQLTQWDNAYYEQGQSPVDDQVYDQLRQTL 70 >gi|291448912|ref|ZP_06588302.1| DNA ligase [Streptomyces roseosporus NRRL 15998] gi|291351859|gb|EFE78763.1| DNA ligase [Streptomyces roseosporus NRRL 15998] Length = 710 Score = 40.6 bits (94), Expect = 0.071, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 13/33 (39%) Query: 85 FTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 D YDR++ + A + PE P V Sbjct: 38 LDDDAYDRLARGIAAYEADHPEEVLAASPTGKV 70 >gi|289672514|ref|ZP_06493404.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. syringae FF5] Length = 561 Score = 40.6 bits (94), Expect = 0.071, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 22/57 (38%) Query: 41 LESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 L L A + S +A E+ L + Y+R D LYD+ ++L Sbjct: 15 LLPGLGHASQCPDWSAAKARSEITALQQQIAAWDDSYHRQGISQIPDELYDQARQKL 71 >gi|239945456|ref|ZP_04697393.1| putative NAD-dependent DNA ligase [Streptomyces roseosporus NRRL 15998] gi|239991920|ref|ZP_04712584.1| putative NAD-dependent DNA ligase [Streptomyces roseosporus NRRL 11379] Length = 702 Score = 40.6 bits (94), Expect = 0.071, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 13/33 (39%) Query: 85 FTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 D YDR++ + A + PE P V Sbjct: 30 LDDDAYDRLARGIAAYEADHPEEVLAASPTGKV 62 >gi|332084490|gb|EGI89685.1| NAD-dependent DNA ligase adenylation domain protein [Shigella dysenteriae 155-74] gi|332084829|gb|EGI90012.1| NAD-dependent DNA ligase adenylation domain protein [Shigella boydii 5216-82] Length = 195 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|331675125|ref|ZP_08375882.1| DNA ligase B (Polydeoxyribonucleotide synthase [NAD+] B) [Escherichia coli TA280] gi|331068034|gb|EGI39432.1| DNA ligase B (Polydeoxyribonucleotide synthase [NAD+] B) [Escherichia coli TA280] Length = 562 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|331649461|ref|ZP_08350547.1| DNA ligase B (Polydeoxyribonucleotide synthase [NAD+] B) [Escherichia coli M605] gi|331041959|gb|EGI14103.1| DNA ligase B (Polydeoxyribonucleotide synthase [NAD+] B) [Escherichia coli M605] Length = 562 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|331644366|ref|ZP_08345495.1| DNA ligase B (Polydeoxyribonucleotide synthase [NAD+] B) [Escherichia coli H736] gi|331655280|ref|ZP_08356279.1| DNA ligase B (Polydeoxyribonucleotide synthase [NAD+] B) [Escherichia coli M718] gi|331036660|gb|EGI08886.1| DNA ligase B (Polydeoxyribonucleotide synthase [NAD+] B) [Escherichia coli H736] gi|331047295|gb|EGI19373.1| DNA ligase B (Polydeoxyribonucleotide synthase [NAD+] B) [Escherichia coli M718] Length = 562 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|324019686|gb|EGB88905.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 117-3] Length = 450 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|323939593|gb|EGB35799.1| NAD-dependent DNA ligase adenylation domain-containing protein [Escherichia coli E482] Length = 562 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|323934808|gb|EGB31190.1| NAD-dependent DNA ligase adenylation domain-containing protein [Escherichia coli E1520] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|315296990|gb|EFU56270.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 16-3] Length = 561 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 27 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 76 >gi|315285425|gb|EFU44870.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 110-3] gi|324008103|gb|EGB77322.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 57-2] Length = 561 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 27 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 76 >gi|331659983|ref|ZP_08360921.1| DNA ligase B (Polydeoxyribonucleotide synthase [NAD+] B) [Escherichia coli TA206] gi|331053198|gb|EGI25231.1| DNA ligase B (Polydeoxyribonucleotide synthase [NAD+] B) [Escherichia coli TA206] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|330909708|gb|EGH38222.1| DNA ligase , LigB [Escherichia coli AA86] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|306816005|ref|ZP_07450143.1| NAD-dependent DNA ligase LigB [Escherichia coli NC101] gi|305850401|gb|EFM50858.1| NAD-dependent DNA ligase LigB [Escherichia coli NC101] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|300815113|ref|ZP_07095338.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 107-1] gi|300532005|gb|EFK53067.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 107-1] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|300822417|ref|ZP_07102557.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 119-7] gi|309797611|ref|ZP_07691999.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 145-7] gi|300525064|gb|EFK46133.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 119-7] gi|308118798|gb|EFO56060.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 145-7] Length = 561 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 27 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 76 >gi|300927922|ref|ZP_07143481.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 187-1] gi|300464014|gb|EFK27507.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 187-1] Length = 561 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 27 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 76 >gi|300898582|ref|ZP_07116912.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 198-1] gi|300357745|gb|EFJ73615.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 198-1] Length = 561 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 27 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 76 >gi|300950021|ref|ZP_07163971.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 116-1] gi|300955364|ref|ZP_07167743.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 175-1] gi|301644314|ref|ZP_07244316.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 146-1] gi|300317736|gb|EFJ67520.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 175-1] gi|300450635|gb|EFK14255.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 116-1] gi|301077352|gb|EFK92158.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 146-1] Length = 561 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 27 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 76 >gi|301028426|ref|ZP_07191672.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 196-1] gi|299878537|gb|EFI86748.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 196-1] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|293417108|ref|ZP_06659735.1| DNA ligase [Escherichia coli B185] gi|291431139|gb|EFF04132.1| DNA ligase [Escherichia coli B185] Length = 562 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|293463971|ref|ZP_06664385.1| DNA ligase B [Escherichia coli B088] gi|291321603|gb|EFE61039.1| DNA ligase B [Escherichia coli B088] Length = 562 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|284923709|emb|CBG36806.1| putative DNA ligase [Escherichia coli 042] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|281603010|gb|ADA75994.1| DNA ligase B [Shigella flexneri 2002017] Length = 562 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|260846568|ref|YP_003224346.1| DNA ligase LigB, NAD(+)-dependent [Escherichia coli O103:H2 str. 12009] gi|257761715|dbj|BAI33212.1| DNA ligase LigB, NAD(+)-dependent [Escherichia coli O103:H2 str. 12009] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|260857958|ref|YP_003231849.1| DNA ligase LigB, NAD(+)-dependent [Escherichia coli O26:H11 str. 11368] gi|260870377|ref|YP_003236779.1| DNA ligase LigB, NAD(+)-dependent [Escherichia coli O111:H- str. 11128] gi|257756607|dbj|BAI28109.1| DNA ligase LigB, NAD(+)-dependent [Escherichia coli O26:H11 str. 11368] gi|257766733|dbj|BAI38228.1| DNA ligase LigB, NAD(+)-dependent [Escherichia coli O111:H- str. 11128] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|256025622|ref|ZP_05439487.1| NAD-dependent DNA ligase LigB [Escherichia sp. 4_1_40B] gi|307140346|ref|ZP_07499702.1| NAD-dependent DNA ligase LigB [Escherichia coli H736] gi|315618649|gb|EFU99235.1| NAD-dependent DNA ligase adenylation domain protein [Escherichia coli 3431] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|227883837|ref|ZP_04001642.1| NAD-dependent DNA ligase LigB [Escherichia coli 83972] gi|300984900|ref|ZP_07177188.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 45-1] gi|301047437|ref|ZP_07194516.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 185-1] gi|227839115|gb|EEJ49581.1| NAD-dependent DNA ligase LigB [Escherichia coli 83972] gi|300300645|gb|EFJ57030.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 185-1] gi|300408329|gb|EFJ91867.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 45-1] gi|307555765|gb|ADN48540.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli ABU 83972] gi|315292916|gb|EFU52268.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 153-1] Length = 561 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 27 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 76 >gi|312948208|gb|ADR29035.1| NAD-dependent DNA ligase LigB [Escherichia coli O83:H1 str. NRG 857C] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|218707281|ref|YP_002414800.1| NAD-dependent DNA ligase LigB [Escherichia coli UMN026] gi|293407270|ref|ZP_06651194.1| DNA ligase B [Escherichia coli FVEC1412] gi|298383016|ref|ZP_06992611.1| DNA ligase [Escherichia coli FVEC1302] gi|226737618|sp|B7NEV1|LIGB_ECOLU RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|218434378|emb|CAR15303.1| DNA ligase, NAD(+)-dependent [Escherichia coli UMN026] gi|291426081|gb|EFE99115.1| DNA ligase B [Escherichia coli FVEC1412] gi|298276852|gb|EFI18370.1| DNA ligase [Escherichia coli FVEC1302] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|218691930|ref|YP_002400142.1| NAD-dependent DNA ligase LigB [Escherichia coli ED1a] gi|254809145|sp|B7N287|LIGB_ECO81 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|218429494|emb|CAR10458.2| DNA ligase, NAD(+)-dependent [Escherichia coli ED1a] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|218702416|ref|YP_002410045.1| NAD-dependent DNA ligase LigB [Escherichia coli IAI39] gi|226737615|sp|B7NQ11|LIGB_ECO7I RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|218372402|emb|CAR20276.1| DNA ligase, NAD(+)-dependent [Escherichia coli IAI39] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|218556210|ref|YP_002389123.1| NAD-dependent DNA ligase LigB [Escherichia coli IAI1] gi|226737616|sp|B7M4D2|LIGB_ECO8A RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|218362978|emb|CAR00615.1| DNA ligase, NAD(+)-dependent [Escherichia coli IAI1] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|218697368|ref|YP_002405035.1| NAD-dependent DNA ligase LigB [Escherichia coli 55989] gi|300923458|ref|ZP_07139498.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 182-1] gi|301325330|ref|ZP_07218837.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 78-1] gi|307314268|ref|ZP_07593876.1| DNA ligase (NAD(+)) [Escherichia coli W] gi|254809144|sp|B7L771|LIGB_ECO55 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|218354100|emb|CAV00658.1| DNA ligase, NAD(+)-dependent [Escherichia coli 55989] gi|300420285|gb|EFK03596.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 182-1] gi|300847857|gb|EFK75617.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 78-1] gi|306906091|gb|EFN36610.1| DNA ligase (NAD(+)) [Escherichia coli W] gi|315062935|gb|ADT77262.1| DNA ligase, NAD(+)-dependent [Escherichia coli W] gi|323376472|gb|ADX48740.1| DNA ligase (NAD(+)) [Escherichia coli KO11] gi|324116014|gb|EGC09940.1| NAD-dependent DNA ligase adenylation domain-containing protein [Escherichia coli E1167] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|194435653|ref|ZP_03067756.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli 101-1] gi|194425196|gb|EDX41180.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli 101-1] Length = 562 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|194430072|ref|ZP_03062577.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli B171] gi|194411899|gb|EDX28216.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli B171] Length = 577 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 43 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 92 >gi|193063789|ref|ZP_03044876.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli E22] gi|192930504|gb|EDV83111.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli E22] Length = 577 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 43 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 92 >gi|191167813|ref|ZP_03029619.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli B7A] gi|190902156|gb|EDV61899.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli B7A] Length = 562 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|188492181|ref|ZP_02999451.1| putative DNA ligase domain protein [Escherichia coli 53638] gi|188487380|gb|EDU62483.1| putative DNA ligase domain protein [Escherichia coli 53638] Length = 562 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|171855259|sp|A7ZTJ9|LIGB_ECO24 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|170018123|ref|YP_001723077.1| NAD-dependent DNA ligase LigB [Escherichia coli ATCC 8739] gi|253771511|ref|YP_003034342.1| NAD-dependent DNA ligase LigB [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163575|ref|YP_003046683.1| NAD-dependent DNA ligase LigB [Escherichia coli B str. REL606] gi|312972067|ref|ZP_07786241.1| NAD-dependent DNA ligase adenylation domain protein [Escherichia coli 1827-70] gi|189046590|sp|B1IYV3|LIGB_ECOLC RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|169753051|gb|ACA75750.1| DNA ligase (NAD(+)) [Escherichia coli ATCC 8739] gi|242379171|emb|CAQ33973.1| DNA ligase [Escherichia coli BL21(DE3)] gi|253322555|gb|ACT27157.1| DNA ligase (NAD(+)) [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975476|gb|ACT41147.1| NAD-dependent DNA ligase LigB [Escherichia coli B str. REL606] gi|253979632|gb|ACT45302.1| NAD-dependent DNA ligase LigB [Escherichia coli BL21(DE3)] gi|310334444|gb|EFQ00649.1| NAD-dependent DNA ligase adenylation domain protein [Escherichia coli 1827-70] gi|323959895|gb|EGB55543.1| NAD-dependent DNA ligase adenylation domain-containing protein [Escherichia coli H489] gi|323971289|gb|EGB66534.1| NAD-dependent DNA ligase adenylation domain-containing protein [Escherichia coli TA007] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|170681126|ref|YP_001745947.1| NAD-dependent DNA ligase LigB [Escherichia coli SMS-3-5] gi|226737619|sp|B1LK84|LIGB_ECOSM RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|170518844|gb|ACB17022.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli SMS-3-5] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|166226372|sp|Q8FC83|LIGB_ECOL6 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|218560719|ref|YP_002393632.1| NAD-dependent DNA ligase LigB [Escherichia coli S88] gi|166226370|sp|A1AHH8|LIGB_ECOK1 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|166226373|sp|Q1R4U5|LIGB_ECOUT RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|226737614|sp|B7MFK8|LIGB_ECO45 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|218367488|emb|CAR05270.1| DNA ligase, NAD(+)-dependent [Escherichia coli S88] gi|307628720|gb|ADN73024.1| NAD-dependent DNA ligase LigB [Escherichia coli UM146] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|166226369|sp|Q0SYH4|LIGB_SHIF8 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|166226367|sp|Q3YW09|LIGB_SHISS RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|157158891|ref|YP_001465128.1| NAD-dependent DNA ligase LigB [Escherichia coli E24377A] gi|331670488|ref|ZP_08371327.1| DNA ligase B (Polydeoxyribonucleotide synthase [NAD+] B) [Escherichia coli TA271] gi|331679739|ref|ZP_08380409.1| DNA ligase B (Polydeoxyribonucleotide synthase [NAD+] B) [Escherichia coli H591] gi|157080921|gb|ABV20629.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli E24377A] gi|331062550|gb|EGI34470.1| DNA ligase B (Polydeoxyribonucleotide synthase [NAD+] B) [Escherichia coli TA271] gi|331072911|gb|EGI44236.1| DNA ligase B (Polydeoxyribonucleotide synthase [NAD+] B) [Escherichia coli H591] Length = 562 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|300919785|ref|ZP_07136260.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 115-1] gi|300413138|gb|EFJ96448.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 115-1] Length = 561 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 27 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 76 >gi|110807676|ref|YP_691196.1| NAD-dependent DNA ligase LigB [Shigella flexneri 5 str. 8401] gi|110617224|gb|ABF05891.1| putative enzyme [Shigella flexneri 5 str. 8401] Length = 562 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|91213164|ref|YP_543150.1| NAD-dependent DNA ligase LigB [Escherichia coli UTI89] gi|117625919|ref|YP_859242.1| NAD-dependent DNA ligase LigB [Escherichia coli APEC O1] gi|237703441|ref|ZP_04533922.1| NAD-dependent DNA ligase LigB [Escherichia sp. 3_2_53FAA] gi|91074738|gb|ABE09619.1| hypothetical DNA ligase-like protein YicF [Escherichia coli UTI89] gi|115515043|gb|ABJ03118.1| NAD-dependent DNA ligase [Escherichia coli APEC O1] gi|226902705|gb|EEH88964.1| NAD-dependent DNA ligase LigB [Escherichia sp. 3_2_53FAA] gi|294489423|gb|ADE88179.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli IHE3034] gi|323949886|gb|EGB45770.1| NAD-dependent DNA ligase adenylation domain-containing protein [Escherichia coli H252] gi|323954950|gb|EGB50729.1| NAD-dependent DNA ligase adenylation domain-containing protein [Escherichia coli H263] Length = 562 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|146229|gb|AAB88710.1| ORF; putative [Escherichia coli] Length = 218 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 27 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 76 >gi|74314119|ref|YP_312538.1| NAD-dependent DNA ligase LigB [Shigella sonnei Ss046] gi|73857596|gb|AAZ90303.1| putative enzyme [Shigella sonnei Ss046] Length = 562 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|30065077|ref|NP_839248.1| NAD-dependent DNA ligase LigB [Shigella flexneri 2a str. 2457T] gi|56480394|ref|NP_709426.2| NAD-dependent DNA ligase LigB [Shigella flexneri 2a str. 301] gi|81839371|sp|Q83PM9|LIGB_SHIFL RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|30043338|gb|AAP19059.1| putative enzyme [Shigella flexneri 2a str. 2457T] gi|56383945|gb|AAN45133.2| putative enzyme [Shigella flexneri 2a str. 301] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|26250293|ref|NP_756333.1| NAD-dependent DNA ligase LigB [Escherichia coli CFT073] gi|26110723|gb|AAN82907.1|AE016769_22 Hypothetical DNA ligase-like protein yicF [Escherichia coli CFT073] Length = 562 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|89110365|ref|AP_004145.1| DNA ligase, NAD(+)-dependent [Escherichia coli str. K-12 substr. W3110] gi|90111628|ref|NP_418104.2| DNA ligase, NAD(+)-dependent [Escherichia coli str. K-12 substr. MG1655] gi|170083154|ref|YP_001732474.1| DNA ligase, NAD(+)-dependent [Escherichia coli str. K-12 substr. DH10B] gi|238902738|ref|YP_002928534.1| DNA ligase, NAD(+)-dependent [Escherichia coli BW2952] gi|401583|sp|P25772|LIGB_ECOLI RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|226737617|sp|B1X980|LIGB_ECODH RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|259494925|sp|C4ZXN9|LIGB_ECOBW RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|85676396|dbj|BAE77646.1| DNA ligase, NAD(+)-dependent [Escherichia coli str. K12 substr. W3110] gi|87082305|gb|AAC76671.2| DNA ligase, NAD(+)-dependent [Escherichia coli str. K-12 substr. MG1655] gi|169890989|gb|ACB04696.1| DNA ligase, NAD(+)-dependent [Escherichia coli str. K-12 substr. DH10B] gi|238860823|gb|ACR62821.1| DNA ligase, NAD(+)-dependent [Escherichia coli BW2952] gi|260447334|gb|ACX37756.1| DNA ligase (NAD(+)) [Escherichia coli DH1] gi|309704049|emb|CBJ03395.1| putative DNA ligase [Escherichia coli ETEC H10407] gi|315138229|dbj|BAJ45388.1| NAD-dependent DNA ligase LigB [Escherichia coli DH1] Length = 560 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|254038848|ref|ZP_04872900.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|290497|gb|AAA62000.1| f562 [Escherichia coli] gi|226838813|gb|EEH70840.1| conserved hypothetical protein [Escherichia sp. 1_1_43] Length = 562 Score = 40.6 bits (94), Expect = 0.072, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|170767052|ref|ZP_02901505.1| NAD(+)-dependent DNA ligase LigB [Escherichia albertii TW07627] gi|170124490|gb|EDS93421.1| NAD(+)-dependent DNA ligase LigB [Escherichia albertii TW07627] Length = 561 Score = 40.6 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 22/52 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 S +A E+ L + Y++ D +YD++S RL Q F E Sbjct: 26 SPAKAHDEISRLQQQIKQWDDDYWKEGQSTIEDSIYDQLSARLAQWQRCFGE 77 >gi|330967268|gb|EGH67528.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. actinidiae str. M302091] Length = 560 Score = 40.6 bits (94), Expect = 0.075, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 23/58 (39%) Query: 41 LESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 L + A + S +A E+ L + Y+R D LYD+ ++L+ Sbjct: 15 LFTAFSHASQCPDWSHAKASSEITALQQQIAKWDDSYHRQGLSQIPDELYDQSRQKLN 72 >gi|218667573|ref|YP_002425666.1| DNA ligase, NAD-dependent, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|218519786|gb|ACK80372.1| DNA ligase, NAD-dependent, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 609 Score = 40.6 bits (94), Expect = 0.080, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 1/44 (2%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFD 109 LV Y R P+ +D YD + ERL Q P L Sbjct: 3 LVHKLEEANAAY-RAGAPIMSDAEYDALVERLRREQPDHPYLQT 45 >gi|167583617|ref|YP_001671807.1| NAD-dependent DNA ligase [Enterobacteria phage phiEco32] gi|164375455|gb|ABY52863.1| NAD-dependent DNA ligase [Enterobacteria phage phiEco32] Length = 109 Score = 40.2 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 + +S E + + + H YY LDDP+++D + +V+ L LQ +PE Sbjct: 13 SEISPAEVINRH---RRQLIIHSYLYYWLDDPIWSDDKWQQVANDLVELQALYPE 64 >gi|331685309|ref|ZP_08385895.1| DNA ligase B (Polydeoxyribonucleotide synthase [NAD+] B) [Escherichia coli H299] gi|331077680|gb|EGI48892.1| DNA ligase B (Polydeoxyribonucleotide synthase [NAD+] B) [Escherichia coli H299] Length = 561 Score = 40.2 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 22/52 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 S A E+ L + Y++ DG+YD++S RL Q F E Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGIYDQLSARLTQWQRCFGE 77 >gi|237743296|ref|ZP_04573777.1| NAD-dependent DNA ligase [Fusobacterium sp. 7_1] gi|229433075|gb|EEO43287.1| NAD-dependent DNA ligase [Fusobacterium sp. 7_1] Length = 696 Score = 40.2 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 41/83 (49%), Gaps = 2/83 (2%) Query: 38 KRALESWLDKAKKVTSLSKGEA--MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 K+ +E + +T S E + ++ L + ++ YY + L +D +D + + Sbjct: 4 KKRIEELKNNQTGLTLYSSQELNDLEKIVKLREDLNKYRDSYYNDNKSLISDYEFDILLK 63 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L++L+E++P+ + P +VG Sbjct: 64 ELESLEEKYPQYKEISSPTTSVG 86 >gi|297516518|ref|ZP_06934904.1| NAD-dependent DNA ligase LigB [Escherichia coli OP50] Length = 83 Score = 40.2 bits (93), Expect = 0.087, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|256028750|ref|ZP_05442584.1| preprotein translocase subunit SecA [Fusobacterium sp. D11] gi|289766653|ref|ZP_06526031.1| NAD-dependent DNA ligase [Fusobacterium sp. D11] gi|289718208|gb|EFD82220.1| NAD-dependent DNA ligase [Fusobacterium sp. D11] Length = 696 Score = 40.2 bits (93), Expect = 0.087, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 41/83 (49%), Gaps = 2/83 (2%) Query: 38 KRALESWLDKAKKVTSLSKGEA--MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 K+ +E + +T S E + ++ L + ++ YY + L +D +D + + Sbjct: 4 KKRIEELKNNQTGLTLYSSQELNDLEKIVKLREDLNKYRDSYYNDNKSLISDYEFDILLK 63 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L++L+E++P+ + P +VG Sbjct: 64 ELESLEEKYPQYKEISSPTTSVG 86 >gi|300939287|ref|ZP_07153961.1| NAD-dependent DNA ligase adenylation domain protein [Escherichia coli MS 21-1] gi|300455794|gb|EFK19287.1| NAD-dependent DNA ligase adenylation domain protein [Escherichia coli MS 21-1] Length = 209 Score = 40.2 bits (93), Expect = 0.092, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Query: 40 ALESWLDKAKKV-TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 ++ W A V + S A E+ L + Y++ DG+YD++S RL Sbjct: 11 SILCWQSSALAVCPAWSLARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLT 70 Query: 99 ALQEQF 104 Q F Sbjct: 71 QWQRCF 76 >gi|297183498|gb|ADI19628.1| NAD-dependent DNA ligase (contains brct domain type II) [uncultured delta proteobacterium HF0770_45N15] Length = 655 Score = 40.2 bits (93), Expect = 0.094, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 1/54 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 M + LV+ YY D D YD + +L+AL+ Q E P Sbjct: 1 MSKTTDLVQRVHDLNHDYYC-DVATVPDVEYDGLVSQLNALEAQVGESLANVSP 53 >gi|296329302|ref|ZP_06871803.1| NAD-dependent DNA ligase LigA [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153658|gb|EFG94475.1| NAD-dependent DNA ligase LigA [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 696 Score = 40.2 bits (93), Expect = 0.098, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 41/83 (49%), Gaps = 2/83 (2%) Query: 38 KRALESWLDKAKKVTSLSKGEA--MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 K+ +E + +T S E + ++ L + ++ YY + L +D +D + + Sbjct: 4 KKRIEELKNNQTGLTFYSSQELNDLEKIVKLREDLNKYRDSYYNDNKSLISDYEFDILLK 63 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L++L+E++P+ + P +VG Sbjct: 64 ELESLEEKYPQYKEISSPTTSVG 86 >gi|19705038|ref|NP_602533.1| NAD-dependent DNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|81485410|sp|Q8RI94|DNLJ_FUSNN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|19712952|gb|AAL93832.1| NAD-dependent DNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 696 Score = 40.2 bits (93), Expect = 0.098, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 41/83 (49%), Gaps = 2/83 (2%) Query: 38 KRALESWLDKAKKVTSLSKGEA--MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 K+ +E + +T S E + ++ L + ++ YY + L +D +D + + Sbjct: 4 KKRIEELKNNQTGLTFYSSQELNDLEKIVKLREDLNKYRDSYYNDNKSLISDYEFDILLK 63 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L++L+E++P+ + P +VG Sbjct: 64 ELESLEEKYPQYKEISSPTTSVG 86 >gi|282864620|ref|ZP_06273675.1| DNA ligase, NAD-dependent [Streptomyces sp. ACTE] gi|282560559|gb|EFB66106.1| DNA ligase, NAD-dependent [Streptomyces sp. ACTE] Length = 709 Score = 40.2 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 14/33 (42%) Query: 85 FTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 D YDR++ + A + + P+ P V Sbjct: 44 LDDDAYDRLARGIAAYEAEHPQEVLAASPTGKV 76 >gi|77461491|ref|YP_350998.1| NAD-dependent DNA ligase LigB [Pseudomonas fluorescens Pf0-1] gi|123772014|sp|Q3K5E7|LIGB_PSEPF RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|77385494|gb|ABA77007.1| putative exported DNA-ligase protein [Pseudomonas fluorescens Pf0-1] Length = 558 Score = 40.2 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 6/72 (8%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF--- 104 A + A EV L + Y+R + D LYD+ RL+ ++ F Sbjct: 21 ADDCPDWAAARASSEVVALQQQIDRWDDAYHREGRSVIADELYDQSRLRLNQWRQCFNLP 80 Query: 105 --PE-LFDEDHP 113 PE L P Sbjct: 81 SPPEPLRTASGP 92 >gi|262276888|ref|ZP_06054681.1| DNA ligase, NAD-dependent [alpha proteobacterium HIMB114] gi|262223991|gb|EEY74450.1| DNA ligase, NAD-dependent [alpha proteobacterium HIMB114] Length = 672 Score = 39.8 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 19/42 (45%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQE 102 E + + K+YY + P D YDR+ ++L ++ Sbjct: 6 KEYQEKKNKLFEYNKFYYDKNSPKIDDATYDRLKKQLIFYEK 47 >gi|288932991|ref|YP_003437050.1| DNA ligase (NAD(+)) [Klebsiella variicola At-22] gi|288887720|gb|ADC56038.1| DNA ligase (NAD(+)) [Klebsiella variicola At-22] Length = 558 Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 26/56 (46%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 E+ L + + ++ Y+R +D +YD+++ RL ++ FP ED Sbjct: 26 PARGRQEISRLHQQIVAWKEDYWRQGASEVSDEVYDQLTLRLTQWRQCFPGATPED 81 >gi|301018976|ref|ZP_07183199.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 69-1] gi|300399470|gb|EFJ83008.1| NAD-dependent DNA ligase OB-fold domain protein [Escherichia coli MS 69-1] Length = 561 Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 27 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGIYDQLSARLTQWQRCF 76 >gi|268569138|ref|XP_002640442.1| C. briggsae CBR-SMG-2 protein [Caenorhabditis briggsae] gi|187032639|emb|CAP28309.1| CBR-SMG-2 protein [Caenorhabditis briggsae AF16] Length = 1051 Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 45/123 (36%), Gaps = 28/123 (22%) Query: 13 FENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGE--AMIEVEYLVKIA 70 F+N+ N +P WK ++ ++ L SW+ +++ + L ++ Sbjct: 185 FQNDDNWSPEDWKSVIA--------EKQLLSWIVNVPSEEQVARARKITAQQAIRLEELW 236 Query: 71 LHHQKWYYRLDD---PLFT-----------DG-LYDRVSERLDALQEQFPELFDEDHPWN 115 H + LDD P D Y ++ L A++ ++ + ++ Sbjct: 237 REHPEA--TLDDLNRPGLDREPDHVQLKYMDAHQYAKIFRPLVAIEAEY-DRRMKESASQ 293 Query: 116 TVG 118 VG Sbjct: 294 AVG 296 >gi|167767031|ref|ZP_02439084.1| hypothetical protein CLOSS21_01549 [Clostridium sp. SS2/1] gi|167711006|gb|EDS21585.1| hypothetical protein CLOSS21_01549 [Clostridium sp. SS2/1] gi|291559629|emb|CBL38429.1| NAD-dependent DNA ligase (contains BRCT domain type II) [butyrate-producing bacterium SSC/2] Length = 509 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 2/84 (2%) Query: 26 KLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLF 85 K LT + KF N+R + K + T+ SK +E L + + + YY+ + Sbjct: 388 KALTKKKKF--NERGYTDKMFKPRSSTTNSKLSIKDRIELLQRKIILNSIAYYKYNKSPM 445 Query: 86 TDGLYDRVSERLDALQEQFPELFD 109 +D YD + + L +Q+++P + D Sbjct: 446 SDKAYDEMCKELVDMQKKYPNIKD 469 >gi|323944100|gb|EGB40180.1| NAD-dependent DNA ligase adenylation domain-containing protein [Escherichia coli H120] gi|332104934|gb|EGJ08280.1| NAD-dependent DNA ligase LigB [Shigella sp. D9] Length = 562 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEIFRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|291285018|ref|YP_003501836.1| DNA ligase B [Escherichia coli O55:H7 str. CB9615] gi|290764891|gb|ADD58852.1| DNA ligase B [Escherichia coli O55:H7 str. CB9615] gi|320644993|gb|EFX14023.1| NAD-dependent DNA ligase LigB [Escherichia coli O157:H- str. 493-89] gi|320650260|gb|EFX18749.1| NAD-dependent DNA ligase LigB [Escherichia coli O157:H- str. H 2687] gi|320655612|gb|EFX23540.1| NAD-dependent DNA ligase LigB [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661346|gb|EFX28770.1| NAD-dependent DNA ligase LigB [Escherichia coli O55:H7 str. USDA 5905] gi|320666360|gb|EFX33359.1| NAD-dependent DNA ligase LigB [Escherichia coli O157:H7 str. LSU-61] Length = 560 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEIFRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|256021349|ref|ZP_05435214.1| NAD-dependent DNA ligase LigB [Shigella sp. D9] Length = 560 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEIFRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|209754568|gb|ACI75591.1| putative enzyme [Escherichia coli] gi|209754574|gb|ACI75594.1| putative enzyme [Escherichia coli] Length = 562 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEIFRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|193070347|ref|ZP_03051289.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli E110019] gi|192956286|gb|EDV86747.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli E110019] Length = 577 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 43 SPARAQEEIFRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 92 >gi|187775663|ref|ZP_02992667.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4196] gi|188024760|ref|ZP_02997228.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4113] gi|189010103|ref|ZP_02804810.2| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4076] gi|189401811|ref|ZP_03006485.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4401] gi|189402714|ref|ZP_03006814.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4486] gi|189403713|ref|ZP_03007195.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4501] gi|189404723|ref|ZP_02810531.2| NAD-dependent DNA ligase adenylation domain [Escherichia coli O157:H7 str. EC869] gi|189405711|ref|ZP_03007918.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC508] gi|208809321|ref|ZP_03251658.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4206] gi|208814147|ref|ZP_03255476.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4045] gi|208820627|ref|ZP_03260947.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4042] gi|209397991|ref|YP_002273126.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4115] gi|217325818|ref|ZP_03441902.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. TW14588] gi|187771517|gb|EDU35361.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4196] gi|188016999|gb|EDU55121.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4113] gi|189002376|gb|EDU71362.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4076] gi|189358909|gb|EDU77328.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4401] gi|189364410|gb|EDU82829.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4486] gi|189369721|gb|EDU88137.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4501] gi|189374635|gb|EDU93051.1| NAD-dependent DNA ligase adenylation domain [Escherichia coli O157:H7 str. EC869] gi|189378779|gb|EDU97195.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC508] gi|208729122|gb|EDZ78723.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4206] gi|208735424|gb|EDZ84111.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4045] gi|208740750|gb|EDZ88432.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4042] gi|209159391|gb|ACI36824.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4115] gi|217322039|gb|EEC30463.1| NAD(+)-dependent DNA ligase LigB [Escherichia coli O157:H7 str. TW14588] Length = 577 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 43 SPARAQEEIFRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 92 >gi|161367494|ref|NP_290227.2| NAD-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EDL933] Length = 560 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEIFRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|38704188|ref|NP_312549.2| NAD-dependent DNA ligase LigB [Escherichia coli O157:H7 str. Sakai] gi|195936208|ref|ZP_03081590.1| NAD-dependent DNA ligase LigB [Escherichia coli O157:H7 str. EC4024] gi|254795602|ref|YP_003080439.1| NAD-dependent DNA ligase LigB [Escherichia coli O157:H7 str. TW14359] gi|261224170|ref|ZP_05938451.1| NAD-dependent DNA ligase LigB [Escherichia coli O157:H7 str. FRIK2000] gi|261254780|ref|ZP_05947313.1| NAD-dependent DNA ligase LigB [Escherichia coli O157:H7 str. FRIK966] gi|166226377|sp|Q8XD89|LIGB_ECO57 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|257096607|sp|B5YWE6|LIGB_ECO5E RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|254595002|gb|ACT74363.1| DNA ligase, NAD(+)-dependent [Escherichia coli O157:H7 str. TW14359] gi|320639554|gb|EFX09162.1| NAD-dependent DNA ligase LigB [Escherichia coli O157:H7 str. G5101] gi|326337353|gb|EGD61188.1| DNA ligase , LigB [Escherichia coli O157:H7 str. 1044] Length = 560 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEIFRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|12518406|gb|AAG58791.1|AE005592_2 putative enzyme [Escherichia coli O157:H7 str. EDL933] Length = 562 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEIFRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|13363997|dbj|BAB37945.1| putative enzyme [Escherichia coli O157:H7 str. Sakai] gi|209754570|gb|ACI75592.1| putative enzyme [Escherichia coli] gi|209754572|gb|ACI75593.1| putative enzyme [Escherichia coli] gi|209754576|gb|ACI75595.1| putative enzyme [Escherichia coli] Length = 562 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ DG+YD++S RL Q F Sbjct: 28 SPARAQEEIFRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 77 >gi|311747943|ref|ZP_07721728.1| DNA ligase, NAD-dependent [Algoriphagus sp. PR1] gi|126574913|gb|EAZ79271.1| DNA ligase, NAD-dependent [Algoriphagus sp. PR1] Length = 51 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 21/47 (44%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 ++ EA + L K H + YY D + +D +++ L+ L Sbjct: 1 MNHQEAAQRIAQLSKEIDHPNQLYYMEDQAVISDFEFNQSRNDLNLL 47 >gi|290511785|ref|ZP_06551153.1| DNA ligase (NAD+) [Klebsiella sp. 1_1_55] gi|289775575|gb|EFD83575.1| DNA ligase (NAD+) [Klebsiella sp. 1_1_55] Length = 559 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 26/56 (46%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 E+ L + + ++ Y+R +D +YD+++ RL ++ FP ED Sbjct: 26 PARGRQEISRLHQQIVAWKEDYWRQGASEVSDEVYDQLTLRLAQWRQCFPGATPED 81 >gi|254303498|ref|ZP_04970856.1| DNA ligase (NAD(+)) [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323690|gb|EDK88940.1| DNA ligase (NAD(+)) [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 696 Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 31/58 (53%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + ++ YY + L +D +D + + L++L+E++P+ + P +VG Sbjct: 29 EKIVKLREDLDKYRDSYYNDNKSLISDYEFDILLKELESLEEKYPQYKETSSPTTSVG 86 >gi|146309759|ref|YP_001174833.1| NAD-dependent DNA ligase LigB [Enterobacter sp. 638] gi|257096556|sp|A4W502|LIGB_ENT38 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|145316635|gb|ABP58782.1| DNA ligase (NAD(+)) [Enterobacter sp. 638] Length = 556 Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP-ELFDEDHP 113 S +A E+ L Y++ +D +YD+++ RL Q+ F E ED P Sbjct: 24 SHAKAEQEIAGLNAQISRWNDAYWQEGKSDVSDEIYDQLNTRLKQWQQCFNHEPATEDIP 83 >gi|331665272|ref|ZP_08366173.1| DNA ligase B (Polydeoxyribonucleotide synthase [NAD+] B) [Escherichia coli TA143] gi|331057782|gb|EGI29768.1| DNA ligase B (Polydeoxyribonucleotide synthase [NAD+] B) [Escherichia coli TA143] Length = 560 Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 20/49 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 A E+ L + Y++ DG+YD++S RL Q F Sbjct: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|312170612|emb|CBX78875.1| putative NAD-dependent DNA ligase [Erwinia amylovora ATCC BAA-2158] Length = 554 Score = 39.5 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 19/50 (38%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + YYR + D YD + ++L Q F Sbjct: 23 SPSRADAEIAALKAQLEKWDEAYYRRGEAQVPDERYDTLHDKLQQWQRCF 72 >gi|206576543|ref|YP_002235985.1| NAD(+)-dependent DNA ligase LigB [Klebsiella pneumoniae 342] gi|257096557|sp|B5XTF0|LIGB_KLEP3 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|206565601|gb|ACI07377.1| NAD(+)-dependent DNA ligase LigB [Klebsiella pneumoniae 342] Length = 558 Score = 39.5 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 26/56 (46%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 E+ L + + ++ Y+R +D +YD+++ RL ++ FP ED Sbjct: 26 PARGRQEISRLHQQIVAWKEDYWRQGASEVSDEVYDQLTLRLAQWRQCFPGTTPED 81 >gi|292486544|ref|YP_003529410.1| putative NAD-dependent DNA ligase [Erwinia amylovora CFBP1430] gi|292897779|ref|YP_003537148.1| DNA ligase [Erwinia amylovora ATCC 49946] gi|291197627|emb|CBJ44721.1| putative DNA ligase [Erwinia amylovora ATCC 49946] gi|291551957|emb|CBA18994.1| putative NAD-dependent DNA ligase [Erwinia amylovora CFBP1430] Length = 554 Score = 39.1 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 19/50 (38%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + YYR + D YD + ++L Q F Sbjct: 23 SPSRADAEIAALKAQLEKWDEAYYRRGEAQVPDERYDTLHDKLQQWQRCF 72 >gi|37524304|ref|NP_927648.1| NAD-dependent DNA ligase LigB [Photorhabdus luminescens subsp. laumondii TTO1] gi|81420505|sp|Q7N9N4|LIGB_PHOLL RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|36783727|emb|CAE12581.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 580 Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 20/53 (37%) Query: 46 DKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 + K S+ + E L++ H + Y + D +YD++ L Sbjct: 26 NTEKNCPEWSQDKLQRETNSLMQQMAHWDQLYRQKGISEIDDEVYDQLMSELT 78 >gi|66048020|ref|YP_237861.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. syringae B728a] gi|81307820|sp|Q4ZLZ9|LIGB_PSEU2 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|63258727|gb|AAY39823.1| DNA ligase (NAD+) [Pseudomonas syringae pv. syringae B728a] Length = 561 Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 18/42 (42%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 +A EV L + Y+R D LYD+ ++L+ Sbjct: 31 AKARSEVTALQQQIAEWDDSYHRQGISQIADELYDQARQKLN 72 >gi|293393631|ref|ZP_06637941.1| NAD-dependent DNA ligase adenylation domain protein [Serratia odorifera DSM 4582] gi|291423966|gb|EFE97185.1| NAD-dependent DNA ligase adenylation domain protein [Serratia odorifera DSM 4582] Length = 566 Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 17/38 (44%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 +E+ L + YY+ L D LYD + ++L Sbjct: 36 LEMTALEQQLTRWDVAYYQQGQGLIDDELYDSLRQKLR 73 >gi|330989493|gb|EGH87596.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. lachrymans str. M301315] Length = 561 Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 22/57 (38%) Query: 41 LESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 L L A + S +A EV L + Y+R D LYD+ ++L Sbjct: 15 LLPGLGHANQCPDWSAAKARSEVTALQQQVAAWDDSYHRQGLSKIPDELYDQARQKL 71 >gi|330874636|gb|EGH08785.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 561 Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 22/58 (37%) Query: 41 LESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 L + A + S +A E+ L + Y+ D LYD+ ++L+ Sbjct: 15 LFTAFSHASQCPDWSHAKASSEITALQQQIAKWDDSYHLQGLSQIPDELYDQSRQKLN 72 >gi|307565636|ref|ZP_07628114.1| NAD-dependent DNA ligase domain protein [Prevotella amnii CRIS 21A-A] gi|307345668|gb|EFN91027.1| NAD-dependent DNA ligase domain protein [Prevotella amnii CRIS 21A-A] Length = 676 Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 1/58 (1%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTV 117 +E LV + YY + TD +D + L ++++ + P N V Sbjct: 6 RKRMEELVLCLNNASDAYYNGKGEIMTDFEWDAAFDELKKIEKEL-GIILPSSPTNNV 62 >gi|253690568|ref|YP_003019758.1| DNA ligase (NAD(+)) [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259494926|sp|C6DJC3|LIGB_PECCP RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|251757146|gb|ACT15222.1| DNA ligase (NAD(+)) [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 562 Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 18/44 (40%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 + E++ L + YY D +YD++ E+L+ Sbjct: 30 DNTRSKKEIDALRQQLEQWDDVYYTEGKSPVADDVYDQLREQLN 73 >gi|299145804|ref|ZP_07038872.1| putative BRCA1 C Terminus (BRCT) domain protein [Bacteroides sp. 3_1_23] gi|298516295|gb|EFI40176.1| putative BRCA1 C Terminus (BRCT) domain protein [Bacteroides sp. 3_1_23] Length = 652 Score = 39.1 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%) Query: 66 LVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 L+ + H Y R+ P +D YD E L L Sbjct: 13 LLDMIKRHNNMY-RMGTPEISDAEYDAEIELLKTL 46 >gi|225389003|ref|ZP_03758727.1| hypothetical protein CLOSTASPAR_02748 [Clostridium asparagiforme DSM 15981] gi|225044943|gb|EEG55189.1| hypothetical protein CLOSTASPAR_02748 [Clostridium asparagiforme DSM 15981] Length = 421 Score = 39.1 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 2/38 (5%) Query: 79 RLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNT 116 DP YD+++ L A++ +P+L D +T Sbjct: 120 VDSDPQM--YTYDQMTRDLQAMEAGYPDLVTLDSLTDT 155 >gi|188532209|ref|YP_001906006.1| NAD-dependent DNA ligase LigB [Erwinia tasmaniensis Et1/99] gi|188027251|emb|CAO95090.1| Putative NAD-dependent DNA ligase [Erwinia tasmaniensis Et1/99] Length = 561 Score = 38.7 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 2/62 (3%) Query: 43 SWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQE 102 S + V S S+ +A E+ L YYR + D YD + +L Q Sbjct: 13 SAIQAQCPVWSASRADA--EISALQAQLEKWDDAYYRRGESPIPDEQYDTLHGKLRQWQR 70 Query: 103 QF 104 F Sbjct: 71 CF 72 >gi|169834756|ref|YP_001715955.1| hypothetical protein CLK_A0328 [Clostridium botulinum A3 str. Loch Maree] gi|169408863|gb|ACA57273.1| hypothetical protein CLK_A0328 [Clostridium botulinum A3 str. Loch Maree] Length = 125 Score = 38.7 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 +K + + E + + + L H YYRL+D L D Y+ + L+ LQ + Sbjct: 19 EEKQVNKNNTHENEIIELINKRRRQILVHSCIYYRLNDNLIDDYTYNEWARELENLQNMY 78 Query: 105 PELF 108 P+L Sbjct: 79 PDLL 82 >gi|260495084|ref|ZP_05815213.1| DNA ligase, NAD-dependent [Fusobacterium sp. 3_1_33] gi|260197527|gb|EEW95045.1| DNA ligase, NAD-dependent [Fusobacterium sp. 3_1_33] Length = 696 Score = 38.7 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 41/83 (49%), Gaps = 2/83 (2%) Query: 38 KRALESWLDKAKKVTSLSKGEA--MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 K+ +E + +T S E + ++ L + ++ YY + L +D +D + + Sbjct: 4 KKRIEELKNNQTGLTLYSSQELNDLEKIVKLREDLDKYRNSYYNDNISLISDYEFDMLLK 63 Query: 96 RLDALQEQFPELFDEDHPWNTVG 118 L++L+E++P+ + P +VG Sbjct: 64 ELESLEEKYPQYKEISSPTTSVG 86 >gi|148259769|ref|YP_001233896.1| DNA ligase, NAD-dependent [Acidiphilium cryptum JF-5] gi|166215383|sp|A5FWJ5|DNLJ_ACICJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|146401450|gb|ABQ29977.1| DNA ligase, NAD-dependent [Acidiphilium cryptum JF-5] Length = 682 Score = 38.7 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 22/53 (41%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + + LV+ YYR D P+ D YD + ++L+ P+L Sbjct: 10 EPADPKARLAELVERLAAADAAYYRDDAPIMDDAAYDALRREAESLRAAHPDL 62 >gi|145356969|ref|XP_001422695.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582938|gb|ABP01012.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 755 Score = 38.7 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 13/26 (50%) Query: 73 HQKWYYRLDDPLFTDGLYDRVSERLD 98 H YY +P+ +D YD + R D Sbjct: 2 HDGKYYNDAEPVISDSEYDGMRARYD 27 >gi|253987704|ref|YP_003039060.1| NAD-dependent DNA ligase LigB [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779154|emb|CAQ82314.1| similar to putative dna ligase-like protein yicf of escherichia coli [Photorhabdus asymbiotica] Length = 578 Score = 38.7 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 22/62 (35%) Query: 37 NKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSER 96 L+ K + S+ + E + L++ + Y + D +YD++ Sbjct: 15 TPVVATETLNTEKDCPAWSQDKLQRETKSLMQQMARWDQLYRQKGISEIDDEVYDQLMAD 74 Query: 97 LD 98 L Sbjct: 75 LI 76 >gi|311068875|ref|YP_003973798.1| hypothetical protein BATR1942_09670 [Bacillus atrophaeus 1942] gi|310869392|gb|ADP32867.1| hypothetical protein BATR1942_09670 [Bacillus atrophaeus 1942] Length = 100 Score = 38.7 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 24/44 (54%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 + + L H YY+L++ + D +D S+ L LQE++PE Sbjct: 9 IGRRRRQILVHSFLYYQLNENIIADHTFDLWSKELVQLQEKYPE 52 >gi|87080443|emb|CAJ76258.1| protein-O-xylosyltransferase [Drosophila persimilis] Length = 881 Score = 38.3 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 9/54 (16%) Query: 57 GEAMIEVEYLVKIALHHQKWYY--RLDDPLFTDGLYDRVSERLDALQEQFPELF 108 G A+ +V L+K + YY D D Y + +L L+++FP + Sbjct: 263 GRALRQVHRLLKALYAPEHVYYIHVDD-----DQDY--LYRKLLELEQKFPNIR 309 >gi|238755583|ref|ZP_04616920.1| DNA ligase B [Yersinia ruckeri ATCC 29473] gi|238706183|gb|EEP98563.1| DNA ligase B [Yersinia ruckeri ATCC 29473] Length = 569 Score = 38.3 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 7/62 (11%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL-------DA 99 A + S+ E + E+ + + K Y++ + L D +YD++ +RL A Sbjct: 20 TASECPEWSEHELVTEIAKMEEQFGQWDKAYHQQGNSLIDDDIYDQLHQRLSHWKSCVKA 79 Query: 100 LQ 101 L+ Sbjct: 80 LE 81 >gi|294784746|ref|ZP_06750034.1| DNA ligase, NAD-dependent [Fusobacterium sp. 3_1_27] gi|294486460|gb|EFG33822.1| DNA ligase, NAD-dependent [Fusobacterium sp. 3_1_27] Length = 696 Score = 38.3 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 31/58 (53%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + ++ YY + L +D +D + + L++L+E++P+ + P +VG Sbjct: 29 EKIVKLREDLDKYRNSYYNDNISLISDYEFDMLLKELESLEEKYPQYKEISSPTTSVG 86 >gi|237742800|ref|ZP_04573281.1| NAD-dependent DNA ligase [Fusobacterium sp. 4_1_13] gi|229430448|gb|EEO40660.1| NAD-dependent DNA ligase [Fusobacterium sp. 4_1_13] Length = 696 Score = 38.3 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 31/58 (53%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + ++ YY + L +D +D + + L++L+E++P+ + P +VG Sbjct: 29 EKIVKLREDLDKYRNSYYNDNISLISDYEFDMLLKELESLEEKYPQYKEISSPTTSVG 86 >gi|269958073|ref|YP_003327862.1| amidinotransferase [Xylanimonas cellulosilytica DSM 15894] gi|269306754|gb|ACZ32304.1| amidinotransferase [Xylanimonas cellulosilytica DSM 15894] Length = 356 Score = 38.3 bits (88), Expect = 0.37, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 4/48 (8%) Query: 44 WLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLD-DPLFTDGLY 90 W+D V + A+ + E L + H + +D P D +Y Sbjct: 40 WMDLTVPVDT---ARAVEQWEALRRTYERHGHTVHVVDPQPGLPDMVY 84 >gi|256846124|ref|ZP_05551582.1| DNA ligase, NAD-dependent [Fusobacterium sp. 3_1_36A2] gi|256719683|gb|EEU33238.1| DNA ligase, NAD-dependent [Fusobacterium sp. 3_1_36A2] Length = 696 Score = 38.3 bits (88), Expect = 0.38, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 31/58 (53%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPWNTVG 118 ++ L + ++ YY + L +D +D + + L++L+E++P+ + P +VG Sbjct: 29 EKIVKLREDLDKYRNSYYNDNISLISDYEFDMLLKELESLEEKYPQYKEISSPTTSVG 86 >gi|302186902|ref|ZP_07263575.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. syringae 642] Length = 561 Score = 38.3 bits (88), Expect = 0.39, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 17/41 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 +A EV L + Y+R D LYD+ ++L Sbjct: 31 AKARSEVTTLQQQIAAWDDSYHRQGISQIPDELYDQARQKL 71 >gi|330955026|gb|EGH55286.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae Cit 7] Length = 561 Score = 37.9 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 25/70 (35%), Gaps = 7/70 (10%) Query: 35 LPNKRA-------LESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTD 87 LP R L L A + S +A EV L + Y+R D Sbjct: 2 LPTSRLMTFALVFLLPGLGHASQCPDWSAAKARSEVTNLQQQMAAWDDSYHRQGISPIPD 61 Query: 88 GLYDRVSERL 97 LYD+ ++L Sbjct: 62 ELYDQARQKL 71 >gi|330940502|gb|EGH43581.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. pisi str. 1704B] Length = 561 Score = 37.9 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 22/57 (38%) Query: 41 LESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 L L A + S +A E+ L + Y+R D LYD+ ++L Sbjct: 15 LLPGLGHASQCPDWSAAKARSEITALQQQIAAGDDSYHRQGISQIPDELYDQARQKL 71 >gi|331014918|gb|EGH94974.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 561 Score = 37.9 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 21/54 (38%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 L A + S A E+ L + Y+R D LYD+ ++L+ Sbjct: 19 LSHASQCPDWSHARASSEITALQQQIASWDDSYHRQGLSQIPDELYDQSRQKLN 72 >gi|213967844|ref|ZP_03395991.1| DNA ligase, NAD-dependent [Pseudomonas syringae pv. tomato T1] gi|301382481|ref|ZP_07230899.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. tomato Max13] gi|302062268|ref|ZP_07253809.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. tomato K40] gi|302132915|ref|ZP_07258905.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927620|gb|EEB61168.1| DNA ligase, NAD-dependent [Pseudomonas syringae pv. tomato T1] Length = 563 Score = 37.9 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 21/54 (38%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 L A + S A E+ L + Y+R D LYD+ ++L+ Sbjct: 21 LSHASQCPDWSHARASSEITALQQQIASWDDSYHRQGLSQIPDELYDQSRQKLN 74 >gi|28867612|ref|NP_790231.1| NAD-dependent DNA ligase [Pseudomonas syringae pv. tomato str. DC3000] gi|81840358|sp|Q88AK8|LIGB_PSESM RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|28850847|gb|AAO53926.1| DNA ligase, NAD-dependent, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 561 Score = 37.9 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 21/54 (38%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 L A + S A E+ L + Y+R D LYD+ ++L+ Sbjct: 19 LSHASQCPDWSHARASSEITALQQQIASWDDSYHRQGLSQIPDELYDQSRQKLN 72 >gi|308505126|ref|XP_003114746.1| CRE-SMG-2 protein [Caenorhabditis remanei] gi|308258928|gb|EFP02881.1| CRE-SMG-2 protein [Caenorhabditis remanei] Length = 1067 Score = 37.9 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 45/123 (36%), Gaps = 28/123 (22%) Query: 13 FENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGE--AMIEVEYLVKIA 70 F+N+ N +P WK ++ ++ L SW+ +++ + L ++ Sbjct: 184 FQNDDNWSPEDWKSVIA--------EKQLLSWIVNVPSEDQVARARKITATQAVRLEELW 235 Query: 71 LHHQKWYYRLDD---PLFT-----------DG-LYDRVSERLDALQEQFPELFDEDHPWN 115 H + +DD P D Y ++ L A++ ++ + ++ Sbjct: 236 RDHPEA--TIDDLNKPGLDREPDHVQLKYMDAHQYSKIFRPLVAIEAEY-DRRMKESASQ 292 Query: 116 TVG 118 VG Sbjct: 293 AVG 295 >gi|322835054|ref|YP_004215081.1| DNA ligase (NAD(+)) [Rahnella sp. Y9602] gi|321170255|gb|ADW75954.1| DNA ligase (NAD(+)) [Rahnella sp. Y9602] Length = 565 Score = 37.9 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 18/56 (32%), Gaps = 4/56 (7%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSER----LDALQEQFPELFDEDH 112 E +L Y++ D +YD + ++ L + PEL Sbjct: 37 QETHHLTAQLTQWDAAYHQSGSSPIEDSVYDHLRQKQRLWLQCASQPVPELTVPAS 92 >gi|317494707|ref|ZP_07953119.1| NAD-dependent DNA ligase adenylation domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917309|gb|EFV38656.1| NAD-dependent DNA ligase adenylation domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 571 Score = 37.9 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 24/57 (42%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 + A E+ L + + Y+ +D +YD++++RL + ++ F Sbjct: 17 QPPCPDWAAERATHEISALQQQMAKWDEAYFLQGSSPVSDEIYDQMAQRLKSWKQCF 73 >gi|307543787|ref|YP_003896266.1| NAD-dependent DNA ligase LigB [Halomonas elongata DSM 2581] gi|307215811|emb|CBV41081.1| NAD-dependent DNA ligase LigB [Halomonas elongata DSM 2581] Length = 561 Score = 37.9 bits (87), Expect = 0.49, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 SKG A E+ L ++ Y R +D +YD+ R +A Q+ FP++ + P Sbjct: 25 SKGHAERELAALHDRLDAWERAYRRNGSSPVSDDIYDQAQARFEAWQDCFPDISVDPAPT 84 >gi|330972946|gb|EGH73012.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. aceris str. M302273PT] Length = 561 Score = 37.9 bits (87), Expect = 0.51, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 +A E L + Y+R D LYD+ ++L+ Sbjct: 31 AKARSEATALQQQIAEWDDSYHRQGISQIADELYDQARQKLN 72 >gi|146284243|ref|YP_001174396.1| NAD-dependent DNA ligase LigB [Pseudomonas stutzeri A1501] gi|145572448|gb|ABP81554.1| DNA ligase, NAD-dependent, putative [Pseudomonas stutzeri A1501] Length = 597 Score = 37.9 bits (87), Expect = 0.51, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 16/45 (35%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDA 99 A E+ L Y+R L D +YD+ +LD Sbjct: 68 DDARARQEIHQLQAQLAQWDDAYHRRGQSLVDDEIYDQSRAQLDG 112 >gi|313204854|ref|YP_004043511.1| c-terminal processing peptidase-3 [Paludibacter propionicigenes WB4] gi|312444170|gb|ADQ80526.1| C-terminal processing peptidase-3 [Paludibacter propionicigenes WB4] Length = 573 Score = 37.5 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 14/93 (15%) Query: 10 SSKFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKI 69 S KF+N+H + KKLL E K PNK A + +K+K + ++++ L+ Sbjct: 486 SDKFKNDHLVDNELLKKLLNSEKK--PNKNAEPNEFEKSKPL-------IKLQLKALLAR 536 Query: 70 ALHHQKWYYRLDDPLFTDGLYDRVSERLDALQE 102 L + YY+ D + + + ++ LQ Sbjct: 537 DLWDENAYYQ-----IIDADNESLKKAVEILQT 564 >gi|330980117|gb|EGH78327.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 561 Score = 37.5 bits (86), Expect = 0.54, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 17/41 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 +A EV L + Y+R D LYD+ ++L Sbjct: 31 AKAHSEVTALQQQIAAWDDSYHRQGISQIPDELYDQARQKL 71 >gi|327482626|gb|AEA85936.1| NAD-dependent DNA ligase LigB [Pseudomonas stutzeri DSM 4166] Length = 553 Score = 37.5 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 16/45 (35%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDA 99 A E+ L Y+R L D +YD+ +LD Sbjct: 24 DDARARQEIHQLQAQLAQWDDAYHRRGQSLVDDEIYDQSRAQLDG 68 >gi|166226374|sp|A4VRF3|LIGB_PSEU5 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B Length = 556 Score = 37.5 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 16/45 (35%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDA 99 A E+ L Y+R L D +YD+ +LD Sbjct: 27 DDARARQEIHQLQAQLAQWDDAYHRRGQSLVDDEIYDQSRAQLDG 71 >gi|261823684|ref|YP_003261790.1| NAD-dependent DNA ligase LigB [Pectobacterium wasabiae WPP163] gi|261607697|gb|ACX90183.1| DNA ligase (NAD(+)) [Pectobacterium wasabiae WPP163] Length = 563 Score = 37.5 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 16/38 (42%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 E+ L + YY D +YD++ E+L+ Sbjct: 37 KEITALRQQLERWDDVYYTEGKSPVEDDVYDQLREQLN 74 >gi|329996951|ref|ZP_08302648.1| NAD-dependent DNA ligase OB-fold domain protein [Klebsiella sp. MS 92-3] gi|328539241|gb|EGF65270.1| NAD-dependent DNA ligase OB-fold domain protein [Klebsiella sp. MS 92-3] Length = 564 Score = 37.5 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 25/56 (44%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 E L + + ++ Y+R +D +YD+++ RL ++ FP ED Sbjct: 32 PARGRQETSRLHQQIVAWKEAYWRQGASGVSDDVYDQLTLRLAQWRQCFPGATPED 87 >gi|262045607|ref|ZP_06018626.1| NAD-dependent DNA ligase adenylation domain protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037033|gb|EEW38285.1| NAD-dependent DNA ligase adenylation domain protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 564 Score = 37.5 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 25/56 (44%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 E L + + ++ Y+R +D +YD+++ RL ++ FP ED Sbjct: 32 PARGRQETSRLHQQIVAWKEAYWRQGASGVSDDVYDQLTLRLAQWRQCFPGATPED 87 >gi|238897097|ref|YP_002921843.1| NAD-dependent DNA ligase LigB [Klebsiella pneumoniae NTUH-K2044] gi|238549425|dbj|BAH65776.1| DNA ligase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 565 Score = 37.5 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 25/56 (44%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 E L + + ++ Y+R +D +YD+++ RL ++ FP ED Sbjct: 33 PARGRQETSRLHQQIVAWKEAYWRQGASGVSDDVYDQLTLRLAQWRQCFPGATPED 88 >gi|237802303|ref|ZP_04590764.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025160|gb|EGI05216.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. oryzae str. 1_6] Length = 560 Score = 37.5 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 16/44 (36%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 S A E+ L K Y+R D LYD+ +L Sbjct: 29 SAARANNEITALQKQIAEWDDSYHRQGVSQIPDELYDQSRLKLK 72 >gi|162453449|ref|YP_001615816.1| protein kinase [Sorangium cellulosum 'So ce 56'] gi|161164031|emb|CAN95336.1| Protein kinase [Sorangium cellulosum 'So ce 56'] Length = 1409 Score = 37.5 bits (86), Expect = 0.62, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 18/76 (23%) Query: 51 VTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPL-------FTDGLYDRVSER------- 96 V++L + ++E L+ L H+K RL++P D Y+ +S+R Sbjct: 895 VSALDGEQVQEDLERLMAADLIHRKR--RLNNPTYQFKHVLIRDAAYESLSKRSRRKVHA 952 Query: 97 --LDALQEQFPELFDE 110 L+ +FPE+ Sbjct: 953 IIARTLEARFPEIVAA 968 >gi|296100486|ref|YP_003610632.1| NAD-dependent DNA ligase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295054945|gb|ADF59683.1| NAD-dependent DNA ligase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 556 Score = 37.5 bits (86), Expect = 0.63, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 20/50 (40%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S+ A E+ L Y++ D +YD+++ RL Q F Sbjct: 24 SQARAEKEIATLSAQIKRWDDAYWQQGISEVNDEVYDQLNGRLKQWQHCF 73 >gi|295110374|emb|CBL24327.1| DNA ligase, NAD-dependent [Ruminococcus obeum A2-162] Length = 624 Score = 37.5 bits (86), Expect = 0.64, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 1/35 (2%) Query: 85 FTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ YD + L+ + + + D P VGY Sbjct: 1 MSNREYDALYNELEQTE-KITGIVLADSPTVRVGY 34 >gi|330891383|gb|EGH24044.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. mori str. 301020] Length = 561 Score = 37.5 bits (86), Expect = 0.65, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 17/41 (41%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 +A EV L + Y+R D LYD+ ++L Sbjct: 31 AKARSEVTALQQQVATWDDSYHRQGLSKIPDELYDQARQKL 71 >gi|166226376|sp|A8ARN4|LIGB_CITK8 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B Length = 560 Score = 37.5 bits (86), Expect = 0.65, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 20/50 (40%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ D +YD++S +L Q F Sbjct: 26 SPARANDEIARLQQQLAQWNDSYWQQGVSAVDDSVYDQLSAQLVQWQRCF 75 >gi|157149264|ref|YP_001456583.1| NAD-dependent DNA ligase LigB [Citrobacter koseri ATCC BAA-895] gi|157086469|gb|ABV16147.1| hypothetical protein CKO_05104 [Citrobacter koseri ATCC BAA-895] Length = 576 Score = 37.5 bits (86), Expect = 0.65, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 20/50 (40%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ L + Y++ D +YD++S +L Q F Sbjct: 42 SPARANDEIARLQQQLAQWNDSYWQQGVSAVDDSVYDQLSAQLVQWQRCF 91 >gi|326403263|ref|YP_004283344.1| DNA ligase [Acidiphilium multivorum AIU301] gi|325050124|dbj|BAJ80462.1| DNA ligase [Acidiphilium multivorum AIU301] Length = 682 Score = 37.5 bits (86), Expect = 0.65, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 20/48 (41%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + L++ YYR D P+ D YD + +L+ P+L Sbjct: 15 KARLAELIERLAAADAAYYRDDAPIMDDAAYDALRREAASLRAAHPDL 62 >gi|310765950|gb|ADP10900.1| NAD-dependent DNA ligase LigB [Erwinia sp. Ejp617] Length = 560 Score = 37.1 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 2/55 (3%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 V S S+ +A E+ L YYR + D YD + +L Q F Sbjct: 20 PVWSASRADA--EISALEAQLKKWDDAYYRRGESQIPDERYDTLHGKLQQWQRCF 72 >gi|227327138|ref|ZP_03831162.1| NAD-dependent DNA ligase LigB [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 563 Score = 37.1 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 16/38 (42%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 E++ L YY D +YD++ E+L+ Sbjct: 37 KEIDALRHQLEQWDDVYYTEGKSPIEDDVYDQLREQLN 74 >gi|238750790|ref|ZP_04612288.1| DNA ligase B [Yersinia rohdei ATCC 43380] gi|238710934|gb|EEQ03154.1| DNA ligase B [Yersinia rohdei ATCC 43380] Length = 563 Score = 37.1 bits (85), Expect = 0.70, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 43 SWLDKAKKV-TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 +W +AK V S+ A E+ LVK Y++ L D +YD++ ++L Sbjct: 16 TWEVRAKPVCPEWSEKRASDEINILVKQLNQLDVAYHQQGISLLDDDIYDQLQDKL 71 >gi|259906726|ref|YP_002647082.1| NAD-dependent DNA ligase LigB [Erwinia pyrifoliae Ep1/96] gi|224962348|emb|CAX53803.1| NAD-dependent DNA ligase [Erwinia pyrifoliae Ep1/96] gi|283476511|emb|CAY72326.1| putative NAD-dependent DNA ligase [Erwinia pyrifoliae DSM 12163] Length = 560 Score = 37.1 bits (85), Expect = 0.70, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 2/55 (3%) Query: 50 KVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 V S S+ +A E+ L YYR + D YD + +L Q F Sbjct: 20 PVWSASRADA--EISALEAQLKKWDDAYYRRGESQIPDERYDTLHGKLQQWQRCF 72 >gi|152972501|ref|YP_001337647.1| NAD-dependent DNA ligase LigB [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166226364|sp|A6TFP6|LIGB_KLEP7 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|150957350|gb|ABR79380.1| DNA ligase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 564 Score = 37.1 bits (85), Expect = 0.71, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 25/55 (45%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 E L + + ++ Y+R +D +YD+++ RL ++ FP ED Sbjct: 33 ARGRQETSRLHQQIVAWKEAYWRQGASGVSDDVYDQLTLRLAQWRQCFPGATPED 87 >gi|34764272|ref|ZP_00145116.1| NAD-DEPENDENT DNA LIGASE [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27885952|gb|EAA23284.1| NAD-DEPENDENT DNA LIGASE [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 99 Score = 37.1 bits (85), Expect = 0.71, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 25/54 (46%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHPW 114 ++ L + ++ YY + L +D +D L++L+E++P L + Sbjct: 29 EKIVKLREDLDKYRNSYYNDNISLISDYEFDMSLTELESLKEKYPSLRNFSSTT 82 >gi|257482942|ref|ZP_05636983.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331011813|gb|EGH91869.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 561 Score = 37.1 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 6/72 (8%) Query: 26 KLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLF 85 +L+T FL L A + +A EV L + Y+R Sbjct: 6 RLMTFALVFL------LPGLGNASQCPDWPAAKARSEVTNLQQQMAAWDDSYHRQGLSKI 59 Query: 86 TDGLYDRVSERL 97 D LYD+ ++L Sbjct: 60 PDELYDQARQKL 71 >gi|268592261|ref|ZP_06126482.1| DNA ligase B [Providencia rettgeri DSM 1131] gi|291312038|gb|EFE52491.1| DNA ligase B [Providencia rettgeri DSM 1131] Length = 574 Score = 37.1 bits (85), Expect = 0.78, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 21/68 (30%), Gaps = 6/68 (8%) Query: 49 KKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVS------ERLDALQE 102 K + E L K + Y +D YD++ +R L E Sbjct: 40 KPCEKQNSKIISQESHRLGKQLQLWNQAYRLAGSSSISDEAYDQLFNLWRSLQRCQQLPE 99 Query: 103 QFPELFDE 110 + PE+ Sbjct: 100 ELPEVLLP 107 >gi|237728943|ref|ZP_04559424.1| NAD-dependent DNA ligase LigB [Citrobacter sp. 30_2] gi|226909565|gb|EEH95483.1| NAD-dependent DNA ligase LigB [Citrobacter sp. 30_2] Length = 559 Score = 37.1 bits (85), Expect = 0.79, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 5/58 (8%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF-----PEL 107 S A E+ L + Y++ + DG+YD+++ +L Q F P+L Sbjct: 26 SPARANEEISRLQQQITQWNDSYWKQGESAVDDGVYDQLNAQLIQWQRCFGDEAPPDL 83 >gi|330812312|ref|YP_004356774.1| putative exported DNA-ligase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380420|gb|AEA71770.1| putative exported DNA-ligase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 557 Score = 37.1 bits (85), Expect = 0.84, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 24/71 (33%), Gaps = 1/71 (1%) Query: 48 AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 A A E+ L + Y+RL D LYD+ +L + F L Sbjct: 20 AAPCPDWPTERARAEIAALQQQIDTWDDGYHRLGQSPVADELYDQSRAQLGQWRRCF-NL 78 Query: 108 FDEDHPWNTVG 118 D P + G Sbjct: 79 AAPDDPPRSTG 89 >gi|323193166|gb|EFZ78384.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] Length = 180 Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEIARLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|322612905|gb|EFY09857.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618970|gb|EFY15857.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625253|gb|EFY22080.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630079|gb|EFY26852.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634271|gb|EFY31006.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635828|gb|EFY32537.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642969|gb|EFY39547.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645038|gb|EFY41569.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649862|gb|EFY46285.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653069|gb|EFY49404.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661112|gb|EFY57340.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662399|gb|EFY58612.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667277|gb|EFY63443.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674346|gb|EFY70439.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678446|gb|EFY74507.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680952|gb|EFY76986.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687112|gb|EFY83085.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323198247|gb|EFZ83353.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323200865|gb|EFZ85935.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206619|gb|EFZ91577.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210468|gb|EFZ95354.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216243|gb|EGA00971.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220466|gb|EGA04920.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225330|gb|EGA09564.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228444|gb|EGA12575.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234265|gb|EGA18353.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237250|gb|EGA21317.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244769|gb|EGA28773.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323245856|gb|EGA29846.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250961|gb|EGA34837.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257291|gb|EGA40990.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262215|gb|EGA45776.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264574|gb|EGA48078.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268863|gb|EGA52321.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 561 Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEIARLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|238910220|ref|ZP_04654057.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 561 Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEIARLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|168818429|ref|ZP_02830429.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205344676|gb|EDZ31440.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320088159|emb|CBY97921.1| DNA ligase Polydeoxyribonucleotide synthase [NAD+] [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 561 Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEIARLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|194449070|ref|YP_002047770.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|226737624|sp|B4T9Z1|LIGB_SALHS RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|194407374|gb|ACF67593.1| NAD-dependent DNA ligase domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] Length = 561 Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEIARLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|168241918|ref|ZP_02666850.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205339075|gb|EDZ25839.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 561 Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEIARLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|204928646|ref|ZP_03219845.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322079|gb|EDZ07277.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 561 Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEIARLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|197247797|ref|YP_002148670.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|226737620|sp|B5EXF2|LIGB_SALA4 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|197211500|gb|ACH48897.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 561 Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEIARLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|167995212|ref|ZP_02576302.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205327077|gb|EDZ13841.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261248887|emb|CBG26741.1| putative DNA ligase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996002|gb|ACY90887.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160276|emb|CBW19799.1| putative DNA ligase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|321226792|gb|EFX51842.1| DNA ligase, LigB [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132100|gb|ADX19530.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 561 Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEIARLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|168235353|ref|ZP_02660411.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734322|ref|YP_002116682.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|226737627|sp|B4TZZ8|LIGB_SALSV RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|194709824|gb|ACF89045.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291581|gb|EDY30933.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 561 Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEIARLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|168233263|ref|ZP_02658321.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194470644|ref|ZP_03076628.1| NAD-dependent DNA ligase adenylation domain [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194457008|gb|EDX45847.1| NAD-dependent DNA ligase adenylation domain [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205332601|gb|EDZ19365.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 561 Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEIARLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|167549012|ref|ZP_02342771.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325606|gb|EDZ13445.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 561 Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEIARLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|161616820|ref|YP_001590785.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|189046593|sp|A9MVP4|LIGB_SALPB RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|161366184|gb|ABX69952.1| hypothetical protein SPAB_04639 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 561 Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEIARLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|16767024|ref|NP_462639.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|81853648|sp|Q8ZL42|LIGB_SALTY RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|16422307|gb|AAL22598.1| putative DNA ligase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|312914765|dbj|BAJ38739.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] Length = 561 Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEIARLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|300714635|ref|YP_003739438.1| Putative NAD-dependent DNA ligase [Erwinia billingiae Eb661] gi|299060471|emb|CAX57578.1| Putative NAD-dependent DNA ligase [Erwinia billingiae Eb661] Length = 563 Score = 36.8 bits (84), Expect = 0.94, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 13/39 (33%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRV 93 + A E+ L YYR + D YD + Sbjct: 23 TPARAEQEMNALENQLSAWDDAYYRAGEQKVPDDRYDAL 61 >gi|195016732|ref|XP_001984473.1| GH16481 [Drosophila grimshawi] gi|193897955|gb|EDV96821.1| GH16481 [Drosophila grimshawi] Length = 884 Score = 36.8 bits (84), Expect = 0.97, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 5/52 (9%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 G A+ +V L++ Q YY D D + +L L+ +FP + Sbjct: 263 GRALRQVHRLLRALYAPQHVYYIH-----VDARQDYLYRQLLELEPKFPNIR 309 >gi|195170834|ref|XP_002026216.1| oxt [Drosophila persimilis] gi|194111111|gb|EDW33154.1| oxt [Drosophila persimilis] Length = 830 Score = 36.8 bits (84), Expect = 0.98, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 5/52 (9%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 G A+ +V L+K + YY D D + +L L+++FP + Sbjct: 262 GRALRQVHRLLKALYAPEHVYYIH-----VDERQDYLYRKLLELEQKFPNIR 308 >gi|322499475|emb|CBZ34548.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1946 Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 8/57 (14%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDR------VSERLDALQEQF 104 L+ + E+ + K Q +R D L D +D + R+ L+++F Sbjct: 263 LTLRDVKAEMRRVAKQLREAQH--HRDDLVLLEDEEHDATDELQQLDVRIAELEQRF 317 >gi|294871760|ref|XP_002766028.1| hypothetical protein Pmar_PMAR027229 [Perkinsus marinus ATCC 50983] gi|239866593|gb|EEQ98745.1| hypothetical protein Pmar_PMAR027229 [Perkinsus marinus ATCC 50983] Length = 519 Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 25/68 (36%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSE 95 P + A L A+ V ++ ++ + + Y +D D Y + + Sbjct: 27 PLQPASLQELKTARTVARRNRTRLANLLKRVKTEIATYDHGDYVSEDEDVDDAEYTALCD 86 Query: 96 RLDALQEQ 103 R D L+ Q Sbjct: 87 REDELERQ 94 >gi|146088064|ref|XP_001465982.1| ATP-dependent DEAD/H DNA helicase recQ [Leishmania infantum JPCM5] gi|134070083|emb|CAM68416.1| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania infantum JPCM5] Length = 1946 Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 8/57 (14%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDR------VSERLDALQEQF 104 L+ + E+ + K Q +R D L D +D + R+ L+++F Sbjct: 263 LTLRDVKAEMRRVAKQLREAQH--HRDDLVLLEDEEHDATDELQQLDVRIAELEQRF 317 >gi|148238818|ref|YP_001224205.1| dihydrobiliverdin:ferredoxin oxidoreductase [Synechococcus sp. WH 7803] gi|166219124|sp|A5GIZ3|PEBA_SYNPW RecName: Full=15,16-dihydrobiliverdin:ferredoxin oxidoreductase gi|147847357|emb|CAK22908.1| 15,16 dihydrobiliverdin:ferredoxin oxidoreductase [Synechococcus sp. WH 7803] Length = 241 Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Query: 79 RLD-DPLFTDGLY-DRVSERLDALQEQFPEL 107 LD PL D Y DR + L AL E+FPEL Sbjct: 97 VLDFQPLIQDQDYLDRHFQGLKALHERFPEL 127 >gi|15828860|ref|NP_326220.1| DNA ligase (polydeoxyribonucleotide synthase [NAD+]) [Mycoplasma pulmonis UAB CTIP] gi|81532955|sp|Q98QH2|DNLJ_MYCPU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|14089803|emb|CAC13562.1| DNA LIGASE (POLYDEOXYRIBONUCLEOTIDE SYNTHASE [NAD+]) [Mycoplasma pulmonis] Length = 679 Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 20/42 (47%) Query: 65 YLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 L + + YY ++ L +D YD L+ +++ FPE Sbjct: 14 ELNEKLKLYNHHYYNKNESLVSDEYYDAKLLELENIRDNFPE 55 >gi|125980013|ref|XP_001354039.1| oxt [Drosophila pseudoobscura pseudoobscura] gi|71164815|sp|Q5QQ53|XYLT_DROPS RecName: Full=Xylosyltransferase oxt; AltName: Full=Peptide O-xylosyltransferase gi|54641025|gb|EAL29776.1| oxt [Drosophila pseudoobscura pseudoobscura] gi|56292005|emb|CAI28925.1| protein xylosyltransferase [Drosophila pseudoobscura] Length = 880 Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 5/52 (9%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 G A+ +V L+K + YY D D + +L L+++FP + Sbjct: 262 GRALRQVHRLLKALYAPEHVYYIH-----VDERQDYLYRKLLELEQKFPNIR 308 >gi|320326326|gb|EFW82379.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. glycinea str. B076] Length = 561 Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 18/42 (42%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 +A EV L + Y+R D LYD+ ++L+ Sbjct: 31 AKARSEVTNLQQQMAAWNDSYHRQGISHIPDELYDQARQKLN 72 >gi|326629797|gb|EGE36140.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 562 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 28 PARAAEEITRLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 69 >gi|213620560|ref|ZP_03373343.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 99 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEITRLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|207858976|ref|YP_002245627.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|226737622|sp|B5R5H2|LIGB_SALEP RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|206710779|emb|CAR35140.1| putative DNA ligase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 561 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEITRLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|205354659|ref|YP_002228460.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|226737623|sp|B5RG75|LIGB_SALG2 RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|205274440|emb|CAR39472.1| putative DNA ligase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] Length = 561 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEITRLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|200387460|ref|ZP_03214072.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199604558|gb|EDZ03103.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 561 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEITRLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|168464952|ref|ZP_02698844.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195632322|gb|EDX50806.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 561 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEITRLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|168260506|ref|ZP_02682479.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205350522|gb|EDZ37153.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 561 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEITRLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|194445315|ref|YP_002042988.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|226737625|sp|B4SXE9|LIGB_SALNS RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|194403978|gb|ACF64200.1| NAD-dependent DNA ligase [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 561 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEITRLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|198244266|ref|YP_002217699.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|226737621|sp|B5FM71|LIGB_SALDC RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|197938782|gb|ACH76115.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326625484|gb|EGE31829.1| NAD-dependent DNA ligase adenylation domain protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 561 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEITRLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|197263258|ref|ZP_03163332.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197241513|gb|EDY24133.1| DNA ligase, NAD-dependent [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 561 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEITRLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|162139527|ref|YP_218649.2| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224585537|ref|YP_002639336.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|166226375|sp|Q57I94|LIGB_SALCH RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|254809146|sp|C0Q1X9|LIGB_SALPC RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|224470065|gb|ACN47895.1| DNA ligase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322716720|gb|EFZ08291.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 561 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEITRLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|56415629|ref|YP_152704.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197364556|ref|YP_002144193.1| NAD-dependent DNA ligase LigB [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81821323|sp|Q5PC41|LIGB_SALPA RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|226737626|sp|B5BI22|LIGB_SALPK RecName: Full=DNA ligase B; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] B gi|56129886|gb|AAV79392.1| putative DNA ligase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197096033|emb|CAR61620.1| putative DNA ligase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 561 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 56 KGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 A E+ L + Y++ D +YD++S RL Sbjct: 27 PARAAEEITRLQQQLADWNDIYWKQGVSAVDDSVYDQLSARL 68 >gi|332089533|gb|EGI94637.1| NAD-dependent DNA ligase adenylation domain protein [Shigella boydii 3594-74] Length = 417 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 20/50 (40%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ + Y++ DG+YD++S RL Q F Sbjct: 15 SPARAQEEIFRQQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 64 >gi|320185697|gb|EFW60455.1| DNA ligase , LigB [Shigella flexneri CDC 796-83] Length = 411 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 20/50 (40%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ + Y++ DG+YD++S RL Q F Sbjct: 9 SPARAQEEIFRQQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 58 >gi|320177344|gb|EFW52346.1| DNA ligase , LigB [Shigella dysenteriae CDC 74-1112] Length = 508 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 20/50 (40%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S A E+ + Y++ DG+YD++S RL Q F Sbjct: 26 SPARAQEEIFRQQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 >gi|298489227|ref|ZP_07007245.1| DNA ligase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156246|gb|EFH97348.1| DNA ligase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 561 Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 18/42 (42%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 +A EV L + Y+R D LYD+ ++L+ Sbjct: 31 AKARSEVTNLQQQMAAWDDSYHRQGISHIPDELYDQARQKLN 72 >gi|288550204|ref|ZP_05969603.2| hypothetical protein ENTCAN_08224 [Enterobacter cancerogenus ATCC 35316] gi|288316113|gb|EFC55051.1| NAD-dependent DNA ligase adenylation domain protein [Enterobacter cancerogenus ATCC 35316] Length = 548 Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 25/50 (50%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 S+G+A E+ L + + Y++ +D +YD+++ RL Q F Sbjct: 16 SQGKAEKEIAALSAQKIRWDEAYWKEGTSEVSDEIYDQLTARLAQWQRCF 65 >gi|149911106|ref|ZP_01899733.1| DNA ligase, NAD-dependent, putative [Moritella sp. PE36] gi|149805856|gb|EDM65845.1| DNA ligase, NAD-dependent, putative [Moritella sp. PE36] Length = 413 Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 19/39 (48%) Query: 62 EVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDAL 100 + YL + H++ YY PL DG +D + + L L Sbjct: 52 RISYLETQIIKHRRIYYAGQTPLLHDGEFDLLVDELTVL 90 >gi|289623888|ref|ZP_06456842.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646918|ref|ZP_06478261.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. aesculi str. 2250] gi|330869835|gb|EGH04544.1| NAD-dependent DNA ligase LigB [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 561 Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 18/42 (42%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLD 98 +A EV L + Y+R D LYD+ ++L+ Sbjct: 31 AKARSEVTNLQQQMAAWDDSYHRQGISHIPDELYDQARQKLN 72 >gi|195126769|ref|XP_002007843.1| GI12152 [Drosophila mojavensis] gi|193919452|gb|EDW18319.1| GI12152 [Drosophila mojavensis] Length = 880 Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 5/52 (9%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 G A+ +V L++ Q YY D D + +L L+ +FP + Sbjct: 265 GRALRQVHRLLRALYAPQHIYYIH-----VDARQDYLYRKLLELEPKFPNIR 311 >gi|257485000|ref|ZP_05639041.1| NAD-dependent DNA ligase LigA [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 33 Score = 36.4 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 10/29 (34%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTD 87 + L H Y+ LD+P D Sbjct: 4 VETRILELRAELDEHNYRYHVLDEPSIPD 32 >gi|288929935|ref|ZP_06423777.1| aspartate aminotransferase [Prevotella sp. oral taxon 317 str. F0108] gi|288328754|gb|EFC67343.1| aspartate aminotransferase [Prevotella sp. oral taxon 317 str. F0108] Length = 397 Score = 36.4 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 10/76 (13%) Query: 7 VFRSSKFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYL 66 V+ ++ FE ITP Q + +T + K L L S + V S E++ L Sbjct: 140 VYVNAGFEQNFKITPQQLEAAITPKTKML----ILCSPSNPTGSVYS------KEELKAL 189 Query: 67 VKIALHHQKWYYRLDD 82 ++ H Y D+ Sbjct: 190 AEVIRRHDDLYVLADE 205 >gi|238759846|ref|ZP_04621002.1| DNA ligase B [Yersinia aldovae ATCC 35236] gi|238701907|gb|EEP94468.1| DNA ligase B [Yersinia aldovae ATCC 35236] Length = 532 Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 16/37 (43%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 +E++ L K Y++ D YD++ +L Sbjct: 3 LEIKELTKQLGKWDIAYHQQGHSPIADDAYDQLVAKL 39 >gi|225572684|ref|ZP_03781439.1| hypothetical protein RUMHYD_00873 [Blautia hydrogenotrophica DSM 10507] gi|225039920|gb|EEG50166.1| hypothetical protein RUMHYD_00873 [Blautia hydrogenotrophica DSM 10507] Length = 622 Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Query: 85 FTDGLYDRVSERLDALQEQFPELFDEDHPWNTVGY 119 ++ YDR+ + L L+++ ++ + P VGY Sbjct: 1 MSNLEYDRLYDELVKLEQE-TKVILANSPTVQVGY 34 >gi|158294820|ref|XP_315833.4| AGAP005810-PA [Anopheles gambiae str. PEST] gi|157015743|gb|EAA10801.5| AGAP005810-PA [Anopheles gambiae str. PEST] Length = 849 Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 18/45 (40%), Gaps = 5/45 (11%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 ++ L++ +YY DP Y + L L++ FP Sbjct: 245 RQIRRLLRAIYDRNHYYYIHIDPK---QHY--LFRELLKLEKDFP 284 >gi|195095248|ref|XP_001997834.1| GH10790 [Drosophila grimshawi] gi|193905698|gb|EDW04565.1| GH10790 [Drosophila grimshawi] Length = 621 Score = 35.6 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 5/50 (10%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 A+ +V L++ Q YY D D + +L L+ +FP + Sbjct: 2 ALRQVHRLLRALYAPQHVYYIH-----VDARQDYLYRQLLELEPKFPNIR 46 >gi|255521960|ref|ZP_05389197.1| NAD-dependent DNA ligase LigA [Listeria monocytogenes FSL J1-175] Length = 34 Score = 35.6 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 13/31 (41%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLY 90 E L+ I + YY +D+P D Y Sbjct: 4 KKRYEELINILDQYSYDYYVIDNPTVEDAEY 34 >gi|974697|gb|AAC37122.1| chitinase [Serratia marcescens] Length = 522 Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 15/82 (18%) Query: 18 NITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQK-- 75 NITPA+ K+L + FL LE D A +A V L + H+ + Sbjct: 58 NITPAKAKQLTHINFSFLDINSNLECAWDPATN-----DAKARDVVNRLTALKAHNPRLR 112 Query: 76 -------WYYRLDDPLFTDGLY 90 WYY D +D Y Sbjct: 113 IMFSIGGWYYSNDL-GVSDANY 133 >gi|304360722|ref|YP_003856853.1| putative DNA ligase [Clostridium phage phiCTP1] gi|302495581|gb|ADL40361.1| putative DNA ligase [Clostridium phage phiCTP1] Length = 118 Score = 35.6 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 21/45 (46%) Query: 63 VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPEL 107 + + L H YYRLD + D ++ L LQ ++PE+ Sbjct: 29 INRRRRQMLIHSIIYYRLDANIIDDTTFNVWGRELLDLQTKYPEI 73 >gi|307826049|ref|ZP_07656262.1| DNA ligase (NAD(+)) [Methylobacter tundripaludum SV96] gi|307732888|gb|EFO03752.1| DNA ligase (NAD(+)) [Methylobacter tundripaludum SV96] Length = 654 Score = 35.6 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 5/58 (8%) Query: 51 VTSLSKGEAMIEV--EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPE 106 + ++K + E+ E L++ Y R +P +D YD V L LQ++ P Sbjct: 27 IAQIAKQASPKELTNEQLLEFLQVCNALY-RGGEPFISDADYDFVF--LAELQKRHPH 81 >gi|17510163|ref|NP_490829.1| Suppressor with Morphological effect on Genitalia family member (smg-2) [Caenorhabditis elegans] gi|15487600|gb|AAK29903.2| Suppressor with morphological effect on genitalia protein 2 [Caenorhabditis elegans] Length = 1069 Score = 35.6 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 24/124 (19%) Query: 10 SSKFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKI 69 S F+N+ N +P WK ++ ++ L SW+ +++ + + + Sbjct: 187 SIAFQNDDNWSPEDWKSVIA--------EKQLLSWIVNVPSEEQVARARKITATQAVRME 238 Query: 70 ALHHQKWYYRLDD---PLFT-----------DG-LYDRVSERLDALQEQFPELFDEDHPW 114 L +DD P D Y +V L A++ ++ E Sbjct: 239 ELWRDHPEATVDDLNKPGLDREPDHVQLRYVDAHHYSKVFRPLVAIEAEYDRRVKE-SAS 297 Query: 115 NTVG 118 VG Sbjct: 298 QAVG 301 >gi|17380277|sp|O76512|RENT1_CAEEL RecName: Full=Regulator of nonsense transcripts 1; AltName: Full=ATP-dependent helicase smg-2; AltName: Full=Nonsense mRNA reducing factor 1; AltName: Full=Up-frameshift suppressor 1 homolog gi|3328177|gb|AAC26789.1| nonsense-mediated mRNA decay trans-acting factor [Caenorhabditis elegans] Length = 1069 Score = 35.6 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 24/124 (19%) Query: 10 SSKFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKI 69 S F+N+ N +P WK ++ ++ L SW+ +++ + + + Sbjct: 187 SIAFQNDDNWSPEDWKSVIA--------EKQLLSWIVNVPSEEQVARARKITATQAVRME 238 Query: 70 ALHHQKWYYRLDD---PLFT-----------DG-LYDRVSERLDALQEQFPELFDEDHPW 114 L +DD P D Y +V L A++ ++ E Sbjct: 239 ELWRDHPEATVDDLNKPGLDREPDHVQLRYVDAHHYSKVFRPLVAIEAEYDRRVKE-SAS 297 Query: 115 NTVG 118 VG Sbjct: 298 QAVG 301 >gi|300725264|ref|YP_003714593.1| DNA ligase [Xenorhabdus nematophila ATCC 19061] gi|297631810|emb|CBJ92531.1| DNA ligase [Xenorhabdus nematophila ATCC 19061] Length = 577 Score = 35.6 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 3/55 (5%) Query: 55 SKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQ---EQFPE 106 ++ + E +L + Y + D +YD++ E L Q EQ PE Sbjct: 38 TQEKLQHETAHLKQQMAKWDHLYRQQGISEIDDEIYDQLLETLRLWQRCSEQIPE 92 >gi|254569394|ref|XP_002491807.1| Topoisomerase II-associated deadenylation-dependent mRNA-decapping factor [Pichia pastoris GS115] gi|238031604|emb|CAY69527.1| Topoisomerase II-associated deadenylation-dependent mRNA-decapping factor [Pichia pastoris GS115] gi|328351693|emb|CCA38092.1| DNA topoisomerase 2-associated protein PAT1 [Pichia pastoris CBS 7435] Length = 833 Score = 35.2 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Query: 47 KAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQE 102 + V + SK E + L H+ +Y LDDP + +R++ R L+ Sbjct: 303 PTEPVENYSKYE-NRQNHQLRSH-HRHEDRFYNLDDPNLSPKERERLARRNHKLER 356 >gi|209883578|ref|YP_002287435.1| transcriptional regulator of AraC family [Oligotropha carboxidovorans OM5] gi|209871774|gb|ACI91570.1| transcriptional regulator of AraC family [Oligotropha carboxidovorans OM5] Length = 304 Score = 35.2 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 3/73 (4%) Query: 13 FENEHNITPAQWKKL---LTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKI 69 F ++P +WKK LTL F P+ + + + + L+ + E+E L + Sbjct: 116 FVTHEAMSPGEWKKGGAGLTLRYGFHPSPFGVAVVIVTERGLAGLAFADTGGEIEALRDM 175 Query: 70 ALHHQKWYYRLDD 82 Y D Sbjct: 176 QTRWPLATYVEDS 188 >gi|197301582|ref|ZP_03166655.1| hypothetical protein RUMLAC_00308 [Ruminococcus lactaris ATCC 29176] gi|197299312|gb|EDY33839.1| hypothetical protein RUMLAC_00308 [Ruminococcus lactaris ATCC 29176] Length = 662 Score = 35.2 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 53 SLSKGEAMIE-VEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 + +G++ + + LV++ +K Y + + + ++ YDR+ + L+ L+++ + Sbjct: 7 KMEQGKSKQQRMRELVELLNRARKAYEQDNTEIMSNYEYDRLYDELEELEKEL-GTKMAN 65 Query: 112 HPWNTVGY 119 P VGY Sbjct: 66 SPTVNVGY 73 >gi|134046257|ref|YP_001097742.1| H+-transporting two-sector ATPase subunit A [Methanococcus maripaludis C5] gi|132663882|gb|ABO35528.1| H+-transporting two-sector ATPase, A subunit [Methanococcus maripaludis C5] Length = 306 Score = 35.2 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 4/56 (7%) Query: 38 KRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRV 93 K+ +E + K K + ++++ + +++YL ++AL H YY +P YD + Sbjct: 48 KKTIEEEIKKGKNIYNMARLCRVGKIDYLKELALKHNIEYYDSSNPK----KYDEL 99 >gi|182435261|ref|YP_001822980.1| putative secreted protease [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463777|dbj|BAG18297.1| putative secreted protease [Streptomyces griseus subsp. griseus NBRC 13350] Length = 520 Score = 35.2 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 13/40 (32%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDA 99 E + H Y+ D P YDRV L A Sbjct: 272 EARWEDFRRWVAKHDDVYHLGDTPASVQQHYDRVRAELAA 311 >gi|297699796|ref|XP_002826958.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 1-like [Pongo abelii] Length = 1524 Score = 34.8 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 4/38 (10%) Query: 71 LHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELF 108 HH + + RLD +D + + L AL+++ P+L Sbjct: 1026 EHHDRGWGRLDQTTLSD----EMRQELRALEQEKPQLL 1059 >gi|126669208|ref|ZP_01740125.1| hypothetical protein MELB17_00020 [Marinobacter sp. ELB17] gi|126626327|gb|EAZ97005.1| hypothetical protein MELB17_00020 [Marinobacter sp. ELB17] Length = 490 Score = 34.8 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 7/34 (20%), Positives = 13/34 (38%) Query: 64 EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 + + Y DD + +D YD + + L Sbjct: 19 RQIEESLERANDAYRNTDDSIISDSDYDALIDEL 52 >gi|218260666|ref|ZP_03475862.1| hypothetical protein PRABACTJOHN_01526 [Parabacteroides johnsonii DSM 18315] gi|218224416|gb|EEC97066.1| hypothetical protein PRABACTJOHN_01526 [Parabacteroides johnsonii DSM 18315] Length = 57 Score = 34.8 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 6/27 (22%), Positives = 10/27 (37%) Query: 59 AMIEVEYLVKIALHHQKWYYRLDDPLF 85 +++ L + H YY L P Sbjct: 31 VKDKIKALREALEQHNYNYYVLSAPTI 57 >gi|290770087|gb|ADD61849.1| putative protein [uncultured organism] Length = 543 Score = 34.8 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 22/39 (56%) Query: 40 ALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYY 78 A E +++ K VT++S+ +A + E L++ H YY Sbjct: 310 AKEDFIENTKDVTTISEADARQKAEDLLQSLGMHDFTYY 348 >gi|183597041|ref|ZP_02958534.1| hypothetical protein PROSTU_00276 [Providencia stuartii ATCC 25827] gi|188023700|gb|EDU61740.1| hypothetical protein PROSTU_00276 [Providencia stuartii ATCC 25827] Length = 570 Score = 34.8 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 19/43 (44%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVS 94 ++LS+ E E + L + + Y + TD YD++ Sbjct: 42 STLSQDELKKESQKLGEQLQQWNRLYRLSGNSPVTDETYDQLL 84 >gi|270158198|ref|ZP_06186855.1| conserved hypothetical protein [Legionella longbeachae D-4968] gi|289163544|ref|YP_003453682.1| hypothetical protein LLO_0200 [Legionella longbeachae NSW150] gi|269990223|gb|EEZ96477.1| conserved hypothetical protein [Legionella longbeachae D-4968] gi|288856717|emb|CBJ10528.1| hypothetical protein LLO_0200 [Legionella longbeachae NSW150] Length = 718 Score = 34.8 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 26/117 (22%) Query: 8 FRSSKFENEHNITPAQWKKLLTLEAKFLPNKRA----LESWLDKAKKVTSLSKGEAMIEV 63 F + K N+ +K L L +FL RA +E D + K+T ++ + Sbjct: 11 FLNDKLNKNKNVADVHFKDFLKLRKEFLEYSRAECGLIEVDFDPSNKLTEVTPSLYTKNM 70 Query: 64 EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQE------QFPELFDEDHPW 114 + +H K YY D ++++ AL++ + +L + P Sbjct: 71 -----VIAYHDKLYYA-----------DTKNQKVIALEKNKSNKDDYEQLRRKCTPT 111 >gi|153813883|ref|ZP_01966551.1| hypothetical protein RUMTOR_00089 [Ruminococcus torques ATCC 27756] gi|331088166|ref|ZP_08337086.1| DNA ligase [Lachnospiraceae bacterium 3_1_46FAA] gi|145848279|gb|EDK25197.1| hypothetical protein RUMTOR_00089 [Ruminococcus torques ATCC 27756] gi|330408822|gb|EGG88285.1| DNA ligase [Lachnospiraceae bacterium 3_1_46FAA] Length = 653 Score = 34.4 bits (78), Expect = 4.6, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + K + + LV++ ++ Y + + + ++ YDR+ + L +L+++ E P Sbjct: 1 MEKKKKTKRMRELVELLNKARRAYEQENTEIMSNFEYDRLYDELLSLEKEL-ETTLASSP 59 Query: 114 WNTVGY 119 VGY Sbjct: 60 TVNVGY 65 >gi|291549033|emb|CBL25295.1| DNA ligase, NAD-dependent [Ruminococcus torques L2-14] Length = 652 Score = 34.4 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 54 LSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDEDHP 113 + + + M + LV++ ++ Y + + + ++ YD++ + L L+E+ + P Sbjct: 1 MDEQKEMNHMRELVELLNRARRSYEQENTEIMSNYEYDKLYDELLELEEKL-GTRMANSP 59 Query: 114 WNTVGY 119 VGY Sbjct: 60 TVNVGY 65 >gi|218777900|ref|YP_002429218.1| DNA ligase (NAD(+)) [Desulfatibacillum alkenivorans AK-01] gi|254781309|sp|B8FKD5|DNLJ_DESAA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] gi|218759284|gb|ACL01750.1| DNA ligase (NAD(+)) [Desulfatibacillum alkenivorans AK-01] Length = 631 Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 1/41 (2%) Query: 64 EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQF 104 E L + + + Y R P+ +D YD + ERL + Sbjct: 15 ELLGQWLEKYNEAY-RAGKPMISDAHYDLLVERLREIAPDH 54 >gi|4235374|gb|AAD13190.1| NAD-dependent DNA ligase [Thermus thermophilus] Length = 557 Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 8/16 (50%), Positives = 9/16 (56%) Query: 103 QFPELFDEDHPWNTVG 118 +FPEL D P VG Sbjct: 1 RFPELKSPDSPTEQVG 16 >gi|330828186|ref|YP_004391138.1| 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [Aeromonas veronii B565] gi|328803322|gb|AEB48521.1| 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [Aeromonas veronii B565] Length = 585 Score = 34.4 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 18/107 (16%) Query: 22 AQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEV------EYLVKIALHHQK 75 A + + +++ N ++ L+ + V L + E +++ + L + HH Sbjct: 273 ADLQSQIRFDSR---NLIHMDMALNDPEFVAELGRAEVLLQFGARLVSKRLGQFIKHHSW 329 Query: 76 WYY--RLDDPLFTDGLYDRVSERL----DALQEQFPELFDEDHPWNT 116 Y P D Y R+ RL A P PW+T Sbjct: 330 QDYWLVDPQPARLDPDY-RLRNRLLCSASAFAAAHP--VTTQAPWHT 373 >gi|212711586|ref|ZP_03319714.1| hypothetical protein PROVALCAL_02661 [Providencia alcalifaciens DSM 30120] gi|212685688|gb|EEB45216.1| hypothetical protein PROVALCAL_02661 [Providencia alcalifaciens DSM 30120] Length = 564 Score = 34.4 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 25/74 (33%), Gaps = 6/74 (8%) Query: 45 LDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVS------ERLD 98 +D K +L E L + + Y +D +YD++ +R Sbjct: 32 VDSQKICHTLDDKLMGAEQLRLGEQLQEWDRQYQIEGVSEVSDEVYDQILAQWRRGQRCL 91 Query: 99 ALQEQFPELFDEDH 112 L ++ P+ + Sbjct: 92 NLPDRLPQPVQPNT 105 >gi|95930744|ref|ZP_01313477.1| DNA ligase (NAD+) [Desulfuromonas acetoxidans DSM 684] gi|95133224|gb|EAT14890.1| DNA ligase (NAD+) [Desulfuromonas acetoxidans DSM 684] Length = 690 Score = 34.4 bits (78), Expect = 5.3, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 10/94 (10%) Query: 17 HNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKW 76 H +T AQ L L + L +R L + + + +T L E LV+ Sbjct: 31 HMLTQAQKDALKQLTFEHLSLQR-LFTLQQQPQTITQLDDAE-------LVEFLTIANS- 81 Query: 77 YYRLDDPLFTDGLYDRV-SERLDALQEQFPELFD 109 +YR PL +D YD + L Q P L Sbjct: 82 FYRDGQPLISDHDYDHIALAELKTRQPSHPFLHT 115 >gi|58269628|ref|XP_571970.1| hypothetical protein CNG02430 [Cryptococcus neoformans var. neoformans JEC21] gi|57228206|gb|AAW44663.1| hypothetical protein CNG02430 [Cryptococcus neoformans var. neoformans JEC21] Length = 902 Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 14/97 (14%) Query: 21 PAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRL 80 P + + + + KR + + D VTS++ I + L ++ Q YRL Sbjct: 482 PKVLAAMQSRQLDMMSGKRPGDEYADGYGPVTSMTSAIHNIRLNQLKQLI---QDAIYRL 538 Query: 81 DDPLFTDG-----------LYDRVSERLDALQEQFPE 106 D PL D + RLD + P+ Sbjct: 539 DKPLIPTKNILTAERQSIPEVDNLLVRLDQWRACHPD 575 >gi|134114009|ref|XP_774252.1| hypothetical protein CNBG2330 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256887|gb|EAL19605.1| hypothetical protein CNBG2330 [Cryptococcus neoformans var. neoformans B-3501A] Length = 902 Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 14/97 (14%) Query: 21 PAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRL 80 P + + + + KR + + D VTS++ I + L ++ Q YRL Sbjct: 482 PKVLAAMQSRQLDMMSGKRPGDEYADGYGPVTSMTSAIHNIRLNQLKQLI---QDAIYRL 538 Query: 81 DDPLFTDG-----------LYDRVSERLDALQEQFPE 106 D PL D + RLD + P+ Sbjct: 539 DKPLIPTKNILTAERQSIPEVDNLLVRLDQWRACHPD 575 >gi|227113300|ref|ZP_03826956.1| NAD-dependent DNA ligase LigB [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 563 Score = 34.4 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 25/68 (36%), Gaps = 10/68 (14%) Query: 61 IEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL----------DALQEQFPELFDE 110 E++ L YY D +YD++ ++L +A+ + P+ + Sbjct: 37 KEIDALRHQLELWDDVYYTEGKSPIEDDVYDQLRDQLNQWLGCFQPKNAIPARLPDNGKQ 96 Query: 111 DHPWNTVG 118 HP G Sbjct: 97 LHPVAHTG 104 >gi|328705376|ref|XP_003242779.1| PREDICTED: protein peanut-like isoform 5 [Acyrthosiphon pisum] Length = 623 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 13/91 (14%) Query: 15 NEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQ 74 N H +TP L+ +F+ + + K +++ E + ++K H+ Sbjct: 337 NSHGMTP--------LDVEFMQRLHDKVNIIPIISKADTMTPDEVTEYKKQILKEIAQHK 388 Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 Y F D D E L L+ + P Sbjct: 389 IKIY-----DFPDSDKDEDRENLKKLKARVP 414 >gi|294055677|ref|YP_003549335.1| hypothetical protein Caka_2147 [Coraliomargarita akajimensis DSM 45221] gi|293615010|gb|ADE55165.1| hypothetical protein Caka_2147 [Coraliomargarita akajimensis DSM 45221] Length = 162 Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 7/28 (25%), Positives = 15/28 (53%), Gaps = 1/28 (3%) Query: 84 LFTDGLYDRVSERLDALQEQFPELFDED 111 + YD + +R++AL++Q+ D Sbjct: 24 TVSRAEYDALLKRVEALEQQY-AAVSPD 50 >gi|192360717|ref|YP_001983417.1| acyltransferase family protein [Cellvibrio japonicus Ueda107] gi|190686882|gb|ACE84560.1| acyltransferase family protein [Cellvibrio japonicus Ueda107] Length = 573 Score = 34.1 bits (77), Expect = 5.8, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Query: 64 EYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQ--EQFPELFDE 110 E L + + + + YYR DDP DG + + + ++ +QF L E Sbjct: 453 ETLRDMLVFYYERYYRQDDP-LADGKHPHLMDENRQIELQQQFAHLNRE 500 >gi|71164813|sp|Q5QQ54|XYLT_CIOSA RecName: Full=Xylosyltransferase; AltName: Full=Peptide O-xylosyltransferase gi|56292003|emb|CAI29051.1| protein xylosyltransferase [Ciona savignyi] Length = 843 Score = 34.1 bits (77), Expect = 5.9, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 5/49 (10%) Query: 57 GEAMIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 G A+ ++ L+K+ H +YY D D + + EQ+P Sbjct: 220 GRAVRQLRRLLKVIYHRNHYYYIH-----VDKRSDYLLREIIKETEQYP 263 >gi|324506908|gb|ADY42936.1| Osmotic avoidance abnormal protein 3 [Ascaris suum] Length = 705 Score = 34.1 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 26/118 (22%) Query: 4 FDRVFRSSKFENEHNITPAQWKKLLT-LEAKFLPNKRALESWLDKAKKVTSLSKGEAMIE 62 +DR + ENE NI P + +K L LE +F+ ++A L KK +A + Sbjct: 411 YDRAVEA--VENEKNIDPDEAQKRLQLLEKQFVGGEQANNEAL---KKERQQKMKDAEKK 465 Query: 63 VEYLVKIALHHQKWYYRLDDPL-------------FTDGLYDRVSERLDALQEQFPEL 107 ++ L H DDPL TD LYD+ ++ L+ + +L Sbjct: 466 MQRLAAALNVHA------DDPLLHVYNSTQEKLEAVTD-LYDKQKRQVKLLESEIEDL 516 >gi|328705370|ref|XP_003242776.1| PREDICTED: protein peanut-like isoform 2 [Acyrthosiphon pisum] gi|328705374|ref|XP_003242778.1| PREDICTED: protein peanut-like isoform 4 [Acyrthosiphon pisum] Length = 471 Score = 34.1 bits (77), Expect = 6.7, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 13/91 (14%) Query: 15 NEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQ 74 N H +TP L+ +F+ + + K +++ E + ++K H+ Sbjct: 185 NSHGMTP--------LDVEFMQRLHDKVNIIPIISKADTMTPDEVTEYKKQILKEIAQHK 236 Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 Y F D D E L L+ + P Sbjct: 237 IKIY-----DFPDSDKDEDRENLKKLKARVP 262 >gi|188587413|ref|YP_001918958.1| peptidase S41 [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352100|gb|ACB86370.1| peptidase S41 [Natranaerobius thermophilus JW/NM-WN-LF] Length = 314 Score = 34.1 bits (77), Expect = 6.8, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 12/70 (17%) Query: 36 PNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDP-LFTDGLYDRVS 94 P LE +D + L+K E + E LV+ A+ + YY + P D Sbjct: 35 PGPEKLEENIDANPLIPDLTKEEELRE--KLVEEAVEILETYYVEEPPHDIQDAE----- 87 Query: 95 ERLDALQEQF 104 +L+E F Sbjct: 88 ----SLEELF 93 >gi|327198330|ref|YP_004306904.1| NAD-dependent DNA ligase [Streptococcus phage Dp-1] gi|314912632|gb|ADT64023.1| NAD-dependent DNA ligase [Streptococcus phage Dp-1] Length = 137 Score = 34.1 bits (77), Expect = 6.9, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 4/78 (5%) Query: 30 LEAKFLP-NKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDG 88 K +P + R + + K K + + + + L H YY +D + DG Sbjct: 24 FGPKLVPASSRRKKRTVPKPKPKID---EQVVELMNRRERQVLVHSCIYYYFNDSIIADG 80 Query: 89 LYDRVSERLDALQEQFPE 106 YD+ S L +L P+ Sbjct: 81 QYDKWSHELYSLIVSHPD 98 >gi|149182415|ref|ZP_01860891.1| AddA [Bacillus sp. SG-1] gi|148849878|gb|EDL64052.1| AddA [Bacillus sp. SG-1] Length = 1258 Score = 34.1 bits (77), Expect = 7.1, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 5/60 (8%) Query: 7 VFRSSKFENEHNITPAQWKKLLTLEAKFL-----PNKRALESWLDKAKKVTSLSKGEAMI 61 VFR KF +TPA+ + + + + PN+++L+S LD K+ L++ +A Sbjct: 1065 VFRRPKFLQSKQLTPAEIGTAMHMVMQHISFSECPNEKSLQSLLDDLKQKELLTEEQAEA 1124 >gi|163759651|ref|ZP_02166736.1| hypothetical protein HPDFL43_09867 [Hoeflea phototrophica DFL-43] gi|162283248|gb|EDQ33534.1| hypothetical protein HPDFL43_09867 [Hoeflea phototrophica DFL-43] Length = 188 Score = 34.1 bits (77), Expect = 7.3, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 8/97 (8%) Query: 7 VFRSSKFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYL 66 +F S K E ++ A+ L +K AL++ LD S E+E Sbjct: 76 LFLSPKTSAEGSVDIAEIAALQEFRSKATSQILALQNRLDSFSGQDLESLKARNEELEAQ 135 Query: 67 VKIALHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQ 103 + ++ DG + + +R L+EQ Sbjct: 136 LDAIHQAER--------EKVDGEIEALRQRNIELEEQ 164 >gi|328705372|ref|XP_003242777.1| PREDICTED: protein peanut-like isoform 3 [Acyrthosiphon pisum] Length = 608 Score = 34.1 bits (77), Expect = 7.4, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 13/91 (14%) Query: 15 NEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQ 74 N H +TP L+ +F+ + + K +++ E + ++K H+ Sbjct: 337 NSHGMTP--------LDVEFMQRLHDKVNIIPIISKADTMTPDEVTEYKKQILKEIAQHK 388 Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 Y F D D E L L+ + P Sbjct: 389 IKIY-----DFPDSDKDEDRENLKKLKARVP 414 >gi|300775004|ref|ZP_07084867.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] gi|300506819|gb|EFK37954.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] Length = 325 Score = 33.7 bits (76), Expect = 7.6, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 24 WKKLLTLEAKFLPNKRALESWLDK--AKKVTSLSKGEAMIEVEYLVKIALHHQKWYYRLD 81 +K++ EA+ L + S+L+K KV +S+ + +++L K H YY+LD Sbjct: 257 FKRISDHEAEVLKDGFYFGSYLNKGFKIKVEEISEEQLNDVIDFLQKKIPHFNIIYYQLD 316 Query: 82 DPLFTD 87 +D Sbjct: 317 SKFVSD 322 >gi|330432478|gb|AEC17537.1| D-ribose transporter ATP binding protein [Gallibacterium anatis UMN179] Length = 495 Score = 33.7 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 10/101 (9%) Query: 5 DRVFRSSKFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVE 64 + +F +F N+ WKK+ T K L + L+ V LS GE +++ Sbjct: 98 ENIFLGREFTNKFG--GIDWKKMTTESEKLL---KRLKIKHCPTTPVEQLSLGE--LQMI 150 Query: 65 YLVKIALHHQKWYYRLDDPL--FTDGLYDRVSERLDALQEQ 103 + K +D+P TD D + + L++Q Sbjct: 151 EIAKALSF-DAKVIIMDEPTDALTDTETDALFNVIRELKQQ 190 >gi|324509136|gb|ADY43847.1| Osmotic avoidance abnormal protein 3 [Ascaris suum] Length = 660 Score = 33.7 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 26/118 (22%) Query: 4 FDRVFRSSKFENEHNITPAQWKKLLT-LEAKFLPNKRALESWLDKAKKVTSLSKGEAMIE 62 +DR + ENE NI P + +K L LE +F+ ++A L KK +A + Sbjct: 411 YDRAVEA--VENEKNIDPDEAQKRLQLLEKQFVGGEQANNEAL---KKERQQKMKDAEKK 465 Query: 63 VEYLVKIALHHQKWYYRLDDPL-------------FTDGLYDRVSERLDALQEQFPEL 107 ++ L H DDPL TD LYD+ ++ L+ + +L Sbjct: 466 MQRLAAALNVHA------DDPLLHVYNSTQEKLEAVTD-LYDKQKRQVKLLESEIEDL 516 >gi|240173568|ref|ZP_04752226.1| hypothetical protein MkanA1_29926 [Mycobacterium kansasii ATCC 12478] Length = 187 Score = 33.7 bits (76), Expect = 8.2, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 17/60 (28%), Gaps = 13/60 (21%) Query: 52 TSLSKGEAMIEVEYLVKIALHHQKWYYRLDDPLFTDG--------LYDRVSERLDALQEQ 103 ++ +A L H W P D D ++ R AL+ Q Sbjct: 51 ARMTPEQARAAYNQLKGEIRDHNSW-----RPPLDDASAVATYNREADALNARKGALEAQ 105 >gi|328705368|ref|XP_001952867.2| PREDICTED: protein peanut-like isoform 1 [Acyrthosiphon pisum] Length = 456 Score = 33.7 bits (76), Expect = 9.2, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 13/91 (14%) Query: 15 NEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIALHHQ 74 N H +TP L+ +F+ + + K +++ E + ++K H+ Sbjct: 185 NSHGMTP--------LDVEFMQRLHDKVNIIPIISKADTMTPDEVTEYKKQILKEIAQHK 236 Query: 75 KWYYRLDDPLFTDGLYDRVSERLDALQEQFP 105 Y F D D E L L+ + P Sbjct: 237 IKIY-----DFPDSDKDEDRENLKKLKARVP 262 >gi|78186857|ref|YP_374900.1| ATPase involved in DNA repair-like [Chlorobium luteolum DSM 273] gi|78166759|gb|ABB23857.1| ATPase involved in DNA repair-like protein [Chlorobium luteolum DSM 273] Length = 910 Score = 33.7 bits (76), Expect = 9.4, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 8/66 (12%) Query: 12 KFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIAL 71 K E E + A WK LL +FL KR + ++ + + ++ E L + Sbjct: 277 KKEAEAKLAEASWKALLEERERFLELKRDISAYEESLAPLDAM--------HEELKQSVA 328 Query: 72 HHQKWY 77 + Y Sbjct: 329 EAARAY 334 >gi|157128923|ref|XP_001661550.1| apoptosis stimulating of P53 [Aedes aegypti] gi|108872425|gb|EAT36650.1| apoptosis stimulating of P53 [Aedes aegypti] Length = 951 Score = 33.7 bits (76), Expect = 9.4, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 9/101 (8%) Query: 11 SKFENEHNITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLVKIA 70 S+ E E + A+ + L + ++R + ++ A IE+E L + Sbjct: 103 SEKEKELTLAVAKVEALTRQLEELRRDRRGTLNLFTGLPSHAQMNSSPAAIELEKLRREL 162 Query: 71 LHHQKWYYRLDDPLFTDGLYDRVSERLDALQEQFPELFDED 111 ++ + + D R+ + +ALQ++ EL D Sbjct: 163 MYRNQLSLQQDA---------RLHLQREALQKRQAELQSVD 194 >gi|326775900|ref|ZP_08235165.1| TAP domain protein [Streptomyces cf. griseus XylebKG-1] gi|326656233|gb|EGE41079.1| TAP domain protein [Streptomyces cf. griseus XylebKG-1] Length = 520 Score = 33.7 bits (76), Expect = 9.5, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 12/38 (31%) Query: 60 MIEVEYLVKIALHHQKWYYRLDDPLFTDGLYDRVSERL 97 E + H Y+ D P YDRV L Sbjct: 272 EARWEDFRRWVAKHDDVYHLGDTPASVQQHYDRVRAEL 309 >gi|322821345|gb|EFZ27697.1| hypothetical protein TCSYLVIO_6087 [Trypanosoma cruzi] Length = 912 Score = 33.7 bits (76), Expect = 9.7, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 7/70 (10%) Query: 38 KRALESWLDKAKKVTSLSKGEAMIEVEY---LVKIALHHQKWYYRLDDPLFTDGLYDRVS 94 +R + + + + + EA E L + L +LD P D + Sbjct: 788 QRVYDEFQTEKRNEEEQRQAEARQRQEQEVQLAREILE-DFRRSQLDQPTILDEE---IR 843 Query: 95 ERLDALQEQF 104 RL+A + +F Sbjct: 844 TRLEAYRAEF 853 >gi|281338669|gb|EFB14253.1| hypothetical protein PANDA_004901 [Ailuropoda melanoleuca] Length = 198 Score = 33.7 bits (76), Expect = 9.9, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 1/26 (3%) Query: 92 RVSERLDALQEQFPEL-FDEDHPWNT 116 RV RL AL+ QF EL F +D Sbjct: 1 RVDHRLQALEAQFKELDFTKDSLTQR 26 >gi|167948326|ref|ZP_02535400.1| periplasmic binding transport protein/transglycosylase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 269 Score = 33.3 bits (75), Expect = 9.9, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Query: 19 ITPAQWKKLLTLEAKFLPNKRALESWLDKAKKVTSLSKGEAMIEVEYLV 67 ITP Q ++L+ A +LPN + + DKAK V L + A V L Sbjct: 3 ITP-QRRQLVDFTAPYLPNVQEILVASDKAKPVDKL-EDLAGQRVHLLR 49 Database: nr Posted date: May 13, 2011 4:10 AM Number of letters in database: 999,999,932 Number of sequences in database: 2,987,209 Database: /data/usr2/db/fasta/nr.01 Posted date: May 13, 2011 4:17 AM Number of letters in database: 999,998,956 Number of sequences in database: 2,896,973 Database: /data/usr2/db/fasta/nr.02 Posted date: May 13, 2011 4:23 AM Number of letters in database: 999,999,979 Number of sequences in database: 2,907,862 Database: /data/usr2/db/fasta/nr.03 Posted date: May 13, 2011 4:29 AM Number of letters in database: 999,999,513 Number of sequences in database: 2,932,190 Database: /data/usr2/db/fasta/nr.04 Posted date: May 13, 2011 4:33 AM Number of letters in database: 792,586,372 Number of sequences in database: 2,260,650 Lambda K H 0.311 0.154 0.508 Lambda K H 0.267 0.0472 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,714,952,307 Number of Sequences: 13984884 Number of extensions: 119586944 Number of successful extensions: 359418 Number of sequences better than 10.0: 2799 Number of HSP's better than 10.0 without gapping: 4383 Number of HSP's successfully gapped in prelim test: 193 Number of HSP's that attempted gapping in prelim test: 354640 Number of HSP's gapped (non-prelim): 4779 length of query: 119 length of database: 4,792,584,752 effective HSP length: 86 effective length of query: 33 effective length of database: 3,589,884,728 effective search space: 118466196024 effective search space used: 118466196024 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 76 (33.7 bits)