HHsearch alignment for GI: 254780132 and conserved domain: COG4088
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism].
Probab=97.92 E-value=8.3e-05 Score=49.98 Aligned_cols=125 Identities=19% Similarity=0.258 Sum_probs=62.8
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCC-CEEEEEEECC---CCCCCCCCCCCCHHHCCHHHHHHHHCCCEEEEEEEECCCEE
Q ss_conf 1999987999998999999985189-8179986027---88898833464201001455422102781876666128704
Q gi|254780132|r 3 HIFVLIGASGVGKTTIAKQVVLNSE-YLVMPVGVTT---RRPRVDEKQYIDYRFISQSQFKGWKHTGLFIETTKVRDEYY 78 (186)
Q Consensus 3 kiivi~GpsGsGK~tl~~~L~~~~~-~~~~~v~~TT---R~~R~~E~~g~dY~Fvs~~~F~~~i~~~~FiE~~~~~g~~Y 78 (186)
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~kdy~~~i~~DEslpi~-ke~yres~~ks~---------------~ 65 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEKDYLRGILWDESLPIL-KEVYRESFLKSV---------------E 65 (261)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHEECCCCCCHH-HHHHHHHHHHHH---------------H
T ss_conf 569982699988017899999999972001121320145412331324037-999999998889---------------9
Q ss_pred EEECCCHHHHHHHCCCCCCCCCCCHHHHHH-------HCCCCCEEEEHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 544220023343102420025420002444-------205432000000232189999876201454489999999986
Q gi|254780132|r 79 GYLKEDINNPMEHGYDILLILTHQGLAPLK-------KLYEDQVTSIFIAPPSEAELIQRRIKRREDIPFNLDPDLFGK 150 (186)
Q Consensus 79 Gts~~~i~~~~~~g~~~il~id~~G~~~lk-------~~~~~~~~~IfI~pps~~~L~~RL~~R~~e~~~~i~~r~~~~ 150 (186)
T Consensus 66 ----rlldSalk-n~~VIvD-dtNYyksmRrqL~ceak~~~tt~ciIyl~~p-lDtc~rrN~ergepip~Evl~qly~R 137 (261)
T COG4088 66 ----RLLDSALK-NYLVIVD-DTNYYKSMRRQLACEAKERKTTWCIIYLRTP-LDTCLRRNRERGEPIPEEVLRQLYDR 137 (261)
T ss_pred ----HHHHHHHC-CEEEEEE-CCCHHHHHHHHHHHHHHHCCCCEEEEEECCC-HHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf ----99999863-6499970-6328889999999999863786599997268-89998860247999989999999996