HHsearch alignment for GI: 254780132 and conserved domain: PRK07261

>PRK07261 topology modulation protein; Provisional.
Probab=97.89  E-value=9.3e-06  Score=55.71  Aligned_cols=84  Identities=18%  Similarity=0.115  Sum_probs=45.5

Q ss_pred             EEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCC-CCCCCCCCCCHHHCCHHHHHHHHCCCEEEEEEEECCCEEEEECC
Q ss_conf             99987999998999999985189817998602788-89883346420100145542210278187666612870454422
Q gi|254780132|r    5 FVLIGASGVGKTTIAKQVVLNSEYLVMPVGVTTRR-PRVDEKQYIDYRFISQSQFKGWKHTGLFIETTKVRDEYYGYLKE   83 (186)
Q Consensus         5 ivi~GpsGsGK~tl~~~L~~~~~~~~~~v~~TTR~-~R~~E~~g~dY~Fvs~~~F~~~i~~~~FiE~~~~~g~~YGts~~   83 (186)
T Consensus         3 I~IiG~sGsGKSTlAr~L~~~~-~ip~~--~LD~l~w~p~w---~~---~~~~e~~~~~~~~~~~~~WIiDGny~~~~~~   73 (171)
T PRK07261          3 IAIIGYSGSGKSTLARFLGQHY-NCPVL--HLDQLHFSSNW---QE---RDDDDMIADISNFLLKQDWIIEGNYSNCLYE   73 (171)
T ss_pred             EEEECCCCCCHHHHHHHHHHHH-CCCEE--EECCEEECCCC---EE---CCHHHHHHHHHHHHHCCCEEEECCCCCHHHH
T ss_conf             9998899986899999999987-97979--70227888999---88---8899999999999848987994785124777


Q ss_pred             CHHHHHHHCCCCCCCC
Q ss_conf             0023343102420025
Q gi|254780132|r   84 DINNPMEHGYDILLIL   99 (186)
Q Consensus        84 ~i~~~~~~g~~~il~i   99 (186)
T Consensus        74 --~rl~~aD~iI~Ld~   87 (171)
T PRK07261         74 --ERMAEADQIIFLNF   87 (171)
T ss_pred             --HHHHHCCEEEEECC
T ss_conf             --67977999999858