HHsearch alignment for GI: 254780132 and conserved domain: PRK08118

>PRK08118 topology modulation protein; Reviewed.
Probab=97.53  E-value=7.8e-05  Score=50.14  Aligned_cols=69  Identities=17%  Similarity=0.217  Sum_probs=37.4

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCC-CCCCCCCCCCHHHCCHHHHHHHHCCCEEEEEEEECCCEEE
Q ss_conf             971999987999998999999985189817998602788-8988334642010014554221027818766661287045
Q gi|254780132|r    1 MAHIFVLIGASGVGKTTIAKQVVLNSEYLVMPVGVTTRR-PRVDEKQYIDYRFISQSQFKGWKHTGLFIETTKVRDEYYG   79 (186)
Q Consensus         1 m~kiivi~GpsGsGK~tl~~~L~~~~~~~~~~v~~TTR~-~R~~E~~g~dY~Fvs~~~F~~~i~~~~FiE~~~~~g~~YG   79 (186)
T Consensus         1 M~rI~I-iG~~GsGKSTlAr~L~~~~-~ip~~--~LD~l~w~~~---w~---~~~~~e~~~~~~~~~~~~~WIidGny~~   70 (167)
T PRK08118          1 MKKIIL-IGSGGSGKSTLARQLGEKL-NIPVH--HLDALFWKPN---WE---GVPKEEQRTVQNELVKEDEWIIDGNYGG   70 (167)
T ss_pred             CCEEEE-ECCCCCCHHHHHHHHHHHH-CCCEE--ECCCEEECCC---CC---CCCHHHHHHHHHHHHHCCCEEEECCCHH
T ss_conf             967999-8899987999999999988-96979--6443476689---94---6888999999999983898799477177