HHsearch alignment for GI: 254780132 and conserved domain: PRK08118
>PRK08118 topology modulation protein; Reviewed.
Probab=97.53 E-value=7.8e-05 Score=50.14 Aligned_cols=69 Identities=17% Similarity=0.217 Sum_probs=37.4
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCC-CCCCCCCCCCHHHCCHHHHHHHHCCCEEEEEEEECCCEEE
Q ss_conf 971999987999998999999985189817998602788-8988334642010014554221027818766661287045
Q gi|254780132|r 1 MAHIFVLIGASGVGKTTIAKQVVLNSEYLVMPVGVTTRR-PRVDEKQYIDYRFISQSQFKGWKHTGLFIETTKVRDEYYG 79 (186)
Q Consensus 1 m~kiivi~GpsGsGK~tl~~~L~~~~~~~~~~v~~TTR~-~R~~E~~g~dY~Fvs~~~F~~~i~~~~FiE~~~~~g~~YG 79 (186)
T Consensus 1 M~rI~I-iG~~GsGKSTlAr~L~~~~-~ip~~--~LD~l~w~~~---w~---~~~~~e~~~~~~~~~~~~~WIidGny~~ 70 (167)
T PRK08118 1 MKKIIL-IGSGGSGKSTLARQLGEKL-NIPVH--HLDALFWKPN---WE---GVPKEEQRTVQNELVKEDEWIIDGNYGG 70 (167)
T ss_pred CCEEEE-ECCCCCCHHHHHHHHHHHH-CCCEE--ECCCEEECCC---CC---CCCHHHHHHHHHHHHHCCCEEEECCCHH
T ss_conf 967999-8899987999999999988-96979--6443476689---94---6888999999999983898799477177