HHsearch alignment for GI: 254780132 and conserved domain: PRK09473
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional.
Probab=96.84 E-value=0.001 Score=43.37 Aligned_cols=50 Identities=12% Similarity=0.078 Sum_probs=32.4
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCC---EEEEEEECCCCCCCCCCCCCCHHHCCHHHHHHH
Q ss_conf 719999879999989999999851898---179986027888988334642010014554221
Q gi|254780132|r 2 AHIFVLIGASGVGKTTIAKQVVLNSEY---LVMPVGVTTRRPRVDEKQYIDYRFISQSQFKGW 61 (186)
Q Consensus 2 ~kiivi~GpsGsGK~tl~~~L~~~~~~---~~~~v~~TTR~~R~~E~~g~dY~Fvs~~~F~~~ 61 (186)
T Consensus 42 GEilgivGeSGsGKSTl~~~i~gll~~~~~~sG~I~----------~~G~~i~~~~~~~~~~~ 94 (330)
T PRK09473 42 GETLGIVGESGSGKSQTAFALMGLLAANGRIGGSAT----------FNGREILNLPEKELNKL 94 (330)
T ss_pred CCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEE----------ECCEECCCCCHHHHHHH
T ss_conf 989999868987799999999768888883358999----------99998665899999986