HHsearch alignment for GI: 254780132 and conserved domain: PRK11308
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional.
Probab=97.06 E-value=0.0011 Score=43.12 Aligned_cols=48 Identities=25% Similarity=0.291 Sum_probs=30.7
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCC--CCCCCHHHCCHHHHHHH
Q ss_conf 7199998799999899999998518981799860278889883--34642010014554221
Q gi|254780132|r 2 AHIFVLIGASGVGKTTIAKQVVLNSEYLVMPVGVTTRRPRVDE--KQYIDYRFISQSQFKGW 61 (186)
Q Consensus 2 ~kiivi~GpsGsGK~tl~~~L~~~~~~~~~~v~~TTR~~R~~E--~~g~dY~Fvs~~~F~~~ 61 (186)
T Consensus 41 GE~lgiVGeSGsGKSTL~~~l~gl~~------------p~~G~I~~~G~dl~~~~~~~~~~~ 90 (327)
T PRK11308 41 GKTLAVVGESGCGKSTLARLLTMIET------------PTGGELYYQGQDLLKADPEAQKLL 90 (327)
T ss_pred CCEEEEECCCCHHHHHHHHHHHCCCC------------CCCCEEEECCEECCCCCHHHHHHH
T ss_conf 99999999983199999999956999------------886379989995577999999997