HHsearch alignment for GI: 254780132 and conserved domain: TIGR02173
>TIGR02173 cyt_kin_arch cytidylate kinase, putative; InterPro: IPR011892 Proteins in this family are believed to be cytidylate kinase. Members of this family are found in the archaea and in spirochaetes, and differ considerably from the common bacterial form of cytidylate kinase described by IPR003136 from INTERPRO.; GO: 0004127 cytidylate kinase activity, 0005524 ATP binding, 0006139 nucleobase nucleoside nucleotide and nucleic acid metabolic process.
Probab=98.41 E-value=4.3e-07 Score=63.81 Aligned_cols=110 Identities=25% Similarity=0.373 Sum_probs=56.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCEEEEEE-ECCCCCCCCCCCCCCHHHCCHHHHHHHHCCCEEEEEEEECCCEEEEEC
Q ss_conf 9999879999989999999851898179986-027888988334642010014554221027818766661287045442
Q gi|254780132|r 4 IFVLIGASGVGKTTIAKQVVLNSEYLVMPVG-VTTRRPRVDEKQYIDYRFISQSQFKGWKHTGLFIETTKVRDEYYGYLK 82 (186)
Q Consensus 4 iivi~GpsGsGK~tl~~~L~~~~~~~~~~v~-~TTR~~R~~E~~g~dY~Fvs~~~F~~~i~~~~FiE~~~~~g~~YGts~ 82 (186)
T Consensus 2 ~I~ISGpPGSGktTvA~~lA~~Ls-l~~-iSaG~iRel--A~~~Gld---l~E~~~--------aee~~eIDk~---iD~ 63 (173)
T TIGR02173 2 IITISGPPGSGKTTVAKILAEKLS-LKL-ISAGDIREL--AEKMGLD---LAESKY--------AEENPEIDKK---IDR 63 (173)
T ss_pred EEEEECCCCCCHHHHHHHHHHHCC-CCE-ECCCHHHHH--HHHCCCC---HHHHHH--------HCCCCCCCHH---HHH
T ss_conf 788735896864789999998639-831-202007889--8642988---777344--------3058631167---537
Q ss_pred CCHHHHHHHCCCCCCCCCCCHHHHHHH---CCCCCEEEEHCCCCCHHHHHHHHHHCCC
Q ss_conf 200233431024200254200024442---0543200000023218999987620145
Q gi|254780132|r 83 EDINNPMEHGYDILLILTHQGLAPLKK---LYEDQVTSIFIAPPSEAELIQRRIKRRE 137 (186)
Q Consensus 83 ~~i~~~~~~g~~~il~id~~G~~~lk~---~~~~~~~~IfI~pps~~~L~~RL~~R~~ 137 (186)
T Consensus 64 -~~~E~A~~~~nvvlEsrlagW--~~~~nG~yaD--~~iyL~A~-levRA~RIA~Re~ 115 (173)
T TIGR02173 64 -RIREIAEKEKNVVLESRLAGW--ILKKNGEYAD--VKIYLKAP-LEVRARRIAKREN 115 (173)
T ss_pred -HHHHHHCCCCCEEEEEHHHHH--HCCCCCCCCC--EEEEECCC-HHHHHHHHHHCCC
T ss_conf -885543048966885205433--1157889675--67886088-3332433211368