HHsearch alignment for GI: 254780132 and conserved domain: cd01878

>cd01878 HflX HflX subfamily. A distinct conserved domain with a glycine-rich segment N-terminal of the GTPase domain characterizes the HflX subfamily. The E. coli HflX has been implicated in the control of the lambda cII repressor proteolysis, but the actual biological functions of these GTPases remain unclear. HflX is widespread, but not universally represented in all three superkingdoms.

Probab=96.67  E-value=0.002  Score=41.64  Aligned_cols=39  Identities=18%  Similarity=0.198  Sum_probs=29.2

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCC
Q ss_conf             9999879999989999999851898179986027888988
Q gi|254780132|r    4 IFVLIGASGVGKTTIAKQVVLNSEYLVMPVGVTTRRPRVD   43 (186)
Q Consensus         4 iivi~GpsGsGK~tl~~~L~~~~~~~~~~v~~TTR~~R~~   43 (186)
T Consensus        43 ~VaivG~PNvGKSTLlN~L~g~~~-~v~~~~~tT~d~~~~   81 (204)
T cd01878          43 TVALVGYTNAGKSTLFNALTGADV-YAEDQLFATLDPTTR   81 (204)
T ss_pred             EEEEECCCCCCHHHHHHHHHCCCC-EEECCCCCCCCCEEE
T ss_conf             799988999989999999948996-341567764576366