HHsearch alignment for GI: 254780132 and conserved domain: cd03116
>cd03116 MobB Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes. In E. coli, the synthesis of Moco involves genes from several loci: moa, mob, mod, moe and mog. The mob locus contains mobA and mobB genes. MobB catalyzes the attachment of the guanine dinucleotide to molybdopterin.
Probab=96.51 E-value=0.0026 Score=40.87 Aligned_cols=46 Identities=20% Similarity=0.211 Sum_probs=30.4
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCC--CEEEE-EEECCCCCCCCCCCCCC
Q ss_conf 1999987999998999999985189--81799-86027888988334642
Q gi|254780132|r 3 HIFVLIGASGVGKTTIAKQVVLNSE--YLVMP-VGVTTRRPRVDEKQYID 49 (186)
Q Consensus 3 kiivi~GpsGsGK~tl~~~L~~~~~--~~~~~-v~~TTR~~R~~E~~g~d 49 (186)
T Consensus 2 kii~ivG~snSGKTTLi~kli~~l~~~G~~V~~iKH~~H~f-~~D~~GkD 50 (159)
T cd03116 2 KVIGFVGYSGSGKTTLLEKLIPALSARGLRVAVIKHDHHDF-DIDTPGKD 50 (159)
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCC-CCCCCCCH
T ss_conf 29999967999999999999999997798598997347677-77789844