HHsearch alignment for GI: 254780132 and conserved domain: cd03223
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=97.30 E-value=0.00031 Score=46.51 Aligned_cols=26 Identities=19% Similarity=0.344 Sum_probs=22.4
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCC
Q ss_conf 71999987999998999999985189
Q gi|254780132|r 2 AHIFVLIGASGVGKTTIAKQVVLNSE 27 (186)
Q Consensus 2 ~kiivi~GpsGsGK~tl~~~L~~~~~ 27 (186)
T Consensus 27 Ge~v~i~G~sGsGKSTLl~~l~Gl~~ 52 (166)
T cd03223 27 GDRLLITGPSGTGKSSLFRALAGLWP 52 (166)
T ss_pred CCEEEEECCCCCCHHHHHHHHCCCCC
T ss_conf 99999995899988999999869876