HHsearch alignment for GI: 254780132 and conserved domain: cd03236

>cd03236 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI s are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLIs have an N-terminal Fe-S domain and two nucleotide binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=97.17  E-value=0.00036  Score=46.14  Aligned_cols=24  Identities=29%  Similarity=0.549  Sum_probs=21.3

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf             719999879999989999999851
Q gi|254780132|r    2 AHIFVLIGASGVGKTTIAKQVVLN   25 (186)
Q Consensus         2 ~kiivi~GpsGsGK~tl~~~L~~~   25 (186)
T Consensus        26 GEi~gLiGpNGaGKSTLlk~i~Gl   49 (255)
T cd03236          26 GQVLGLVGPNGIGKSTALKILAGK   49 (255)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHCC
T ss_conf             809999899997099999999679