HHsearch alignment for GI: 254780132 and conserved domain: cd03288
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=97.44 E-value=0.00021 Score=47.59 Aligned_cols=51 Identities=12% Similarity=0.137 Sum_probs=32.8
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHCCHHHHHHHH
Q ss_conf 7199998799999899999998518981799860278889883346420100145542210
Q gi|254780132|r 2 AHIFVLIGASGVGKTTIAKQVVLNSEYLVMPVGVTTRRPRVDEKQYIDYRFISQSQFKGWK 62 (186)
Q Consensus 2 ~kiivi~GpsGsGK~tl~~~L~~~~~~~~~~v~~TTR~~R~~E~~g~dY~Fvs~~~F~~~i 62 (186)
T Consensus 47 Ge~vaIvG~sGsGKSTL~~ll~gl~~p~~G~I----------~idg~di~~~~~~~lr~~i 97 (257)
T cd03288 47 GQKVGICGRTGSGKSSLSLAFFRMVDIFDGKI----------VIDGIDISKLPLHTLRSRL 97 (257)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHCCCCCCCEE----------EECCEEHHHCCHHHHHHHE
T ss_conf 99999999999819999999960566788889----------9998996879999997505