HHsearch alignment for GI: 254780132 and conserved domain: pfam08433

>pfam08433 KTI12 Chromatin associated protein KTI12. This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II. The Elongator complex has histone acetyltransferase activity.
Probab=97.43  E-value=0.00042  Score=45.74  Aligned_cols=111  Identities=16%  Similarity=0.185  Sum_probs=58.6

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHCCHHHHHHHHCCCEEEEEEEE--CCCEEEEE
Q ss_conf             9999879999989999999851898179986027888988334642010014554221027818766661--28704544
Q gi|254780132|r    4 IFVLIGASGVGKTTIAKQVVLNSEYLVMPVGVTTRRPRVDEKQYIDYRFISQSQFKGWKHTGLFIETTKV--RDEYYGYL   81 (186)
Q Consensus         4 iivi~GpsGsGK~tl~~~L~~~~~~~~~~v~~TTR~~R~~E~~g~dY~Fvs~~~F~~~i~~~~FiE~~~~--~g~~YGts   81 (186)
T Consensus         1 Livl~G~P~SGKSt~A~~L~~~l~~~~-----------------~~v~vi~d~~~~~--~~~~---y~~s~~Ek~~R~~l   58 (266)
T pfam08433         1 LIILTGLPSSGKSTRAKELAKYLEEKG-----------------YDVIVISDESLGI--ESDD---YKDSKKEKFLRGSL   58 (266)
T ss_pred             CEEEECCCCCCHHHHHHHHHHHHHHCC-----------------CEEEEECCCCCCC--CCCC---CCCCHHHHHHHHHH
T ss_conf             979857999968899999999999759-----------------9389978001267--5310---00104789999999


Q ss_pred             CCCHHHHHHHCCCCCCCCCCC---HHHH----HHHCCCCCEEEEHCCCCCHHHHHHHHHHCCCC
Q ss_conf             220023343102420025420---0024----44205432000000232189999876201454
Q gi|254780132|r   82 KEDINNPMEHGYDILLILTHQ---GLAP----LKKLYEDQVTSIFIAPPSEAELIQRRIKRRED  138 (186)
Q Consensus        82 ~~~i~~~~~~g~~~il~id~~---G~~~----lk~~~~~~~~~IfI~pps~~~L~~RL~~R~~e  138 (186)
T Consensus        59 ~s~v~r~Ls~~~iVIlD-~~NYiKG~RYEL~C~Ak~~~t~~c~v~~~~p-~e~~~~~N~~r~~~  120 (266)
T pfam08433        59 RSAVKRDLSKNTIVIVD-SLNYIKGFRYELYCIAKEAKTTYCVVYCKAP-LDTCLKWNEERGEP  120 (266)
T ss_pred             HHHHHHHHCCCCEEEEC-CCCCHHHHHHHHHHHHHHCCCCEEEEEECCC-HHHHHHHHCCCCCC
T ss_conf             99998751668889954-8740456899999999863888489996899-89999862147777