HHsearch alignment for GI: 254780132 and conserved domain: pfam08433
>pfam08433 KTI12 Chromatin associated protein KTI12. This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II. The Elongator complex has histone acetyltransferase activity.
Probab=97.43 E-value=0.00042 Score=45.74 Aligned_cols=111 Identities=16% Similarity=0.185 Sum_probs=58.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHCCHHHHHHHHCCCEEEEEEEE--CCCEEEEE
Q ss_conf 9999879999989999999851898179986027888988334642010014554221027818766661--28704544
Q gi|254780132|r 4 IFVLIGASGVGKTTIAKQVVLNSEYLVMPVGVTTRRPRVDEKQYIDYRFISQSQFKGWKHTGLFIETTKV--RDEYYGYL 81 (186)
Q Consensus 4 iivi~GpsGsGK~tl~~~L~~~~~~~~~~v~~TTR~~R~~E~~g~dY~Fvs~~~F~~~i~~~~FiE~~~~--~g~~YGts 81 (186)
T Consensus 1 Livl~G~P~SGKSt~A~~L~~~l~~~~-----------------~~v~vi~d~~~~~--~~~~---y~~s~~Ek~~R~~l 58 (266)
T pfam08433 1 LIILTGLPSSGKSTRAKELAKYLEEKG-----------------YDVIVISDESLGI--ESDD---YKDSKKEKFLRGSL 58 (266)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHCC-----------------CEEEEECCCCCCC--CCCC---CCCCHHHHHHHHHH
T ss_conf 979857999968899999999999759-----------------9389978001267--5310---00104789999999
Q ss_pred CCCHHHHHHHCCCCCCCCCCC---HHHH----HHHCCCCCEEEEHCCCCCHHHHHHHHHHCCCC
Q ss_conf 220023343102420025420---0024----44205432000000232189999876201454
Q gi|254780132|r 82 KEDINNPMEHGYDILLILTHQ---GLAP----LKKLYEDQVTSIFIAPPSEAELIQRRIKRRED 138 (186)
Q Consensus 82 ~~~i~~~~~~g~~~il~id~~---G~~~----lk~~~~~~~~~IfI~pps~~~L~~RL~~R~~e 138 (186)
T Consensus 59 ~s~v~r~Ls~~~iVIlD-~~NYiKG~RYEL~C~Ak~~~t~~c~v~~~~p-~e~~~~~N~~r~~~ 120 (266)
T pfam08433 59 RSAVKRDLSKNTIVIVD-SLNYIKGFRYELYCIAKEAKTTYCVVYCKAP-LDTCLKWNEERGEP 120 (266)
T ss_pred HHHHHHHHCCCCEEEEC-CCCCHHHHHHHHHHHHHHCCCCEEEEEECCC-HHHHHHHHCCCCCC
T ss_conf 99998751668889954-8740456899999999863888489996899-89999862147777