HHsearch alignment for GI: 254780134 and conserved domain: PRK02436
>PRK02436 xerD site-specific tyrosine recombinase XerD-like protein; Reviewed.
Probab=100.00 E-value=1.6e-38 Score=268.90 Aligned_cols=244 Identities=20% Similarity=0.208 Sum_probs=196.4
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999983554356978899999999999999569995896999999988751-599789999999999999644552
Q gi|254780134|r 72 KWLISEYRKSAHWGSLAVNSRISFESYFDQIIRKSGDFDYRKITTKHIRSGVESR-KHTPSSAIQFLTSMRVLFKWAVRQ 150 (348)
Q Consensus 72 ~~l~~~y~~~~~~~~l~~~T~~~~~~~~~~~~~~~g~~~l~~it~~~i~~~~~~~-~~~~~t~n~~~~~l~~~~~~a~~~ 150 (348)
T Consensus 2 ~~fl~~l~~e---k~lS~nTi~aY~~DL~~F~~fl~~----~i~~~~i~~y~~~L~~~~~st~~Rklsslr~F~~fL~~~ 74 (247)
T PRK02436 2 KNYIEPFLAS---KALSVNSQKSYRYDLQQFCQLVGE----RVNQTSLKLYQNSLANLKLSAQKRKLSAVNQFLYFLYQK 74 (247)
T ss_pred HHHHHHHHHH---HCCCHHHHHHHHHHHHHHHHHHHH----HCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 8899999998---691499999999999999999873----589999999999987167999999999999999999976
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCH
Q ss_conf 00105665103464324444211652344566664037808999989898618873100256640144302332113310
Q gi|254780134|r 151 EYVAINPCLSVERPKRKTEGIRPWTKEDMQQFKSFWSEGSQPRLAFEFLLYSGLRCSDSCRAGVQHLQNNIFSIKTQKTG 230 (348)
Q Consensus 151 ~~i~~NP~~~v~~~~~~~~~~~~~t~~ei~~~~~~~~~~~~~~~~~~l~~~TG~R~~Ei~~L~~~did~~~i~~~~~Kt~ 230 (348)
T Consensus 75 ~~i~~~~~~-~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~r~i~~ll~~tGlRvSEl~~L~~~Did~~~~~i~v~kg~ 152 (247)
T PRK02436 75 KYLDSFFKL-KETAKVMRSEKQQPEILDLSSFYQETP-FPEGQLIALLILELGLTPSEIAGLKVADIDLDFQVLTIEKAG 152 (247)
T ss_pred CCCCCCCCH-HCCCCCCCCCCCCCHHHHHHHHHCCCC-CHHHHHHHHHHHHHCCHHHHHHCCCHHHHCCCCCEEEEECCC
T ss_conf 876675204-205889887654131867998856467-856899999999969479999789199919887879990799
Q ss_pred HHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 24331121689999964201332211222457758778999999999983889-98140269999999984899889999
Q gi|254780134|r 231 TIITVELPDGFMKLLAMTPIGKETFFINNDKQKMNATQFSIWFKAKATKAGVN-KSAHGVRKFSATISADAGATAHELMA 309 (348)
Q Consensus 231 ~~~~vpl~~~l~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~agi~-~~~H~lRht~at~l~~~G~~~~~i~~ 309 (348)
T Consensus 153 k~R~Vpl~~~~~~~l~~y~~~~~~~l~~~~g~~lsr~~~~~~lk~~~~~~g~~~vtPH~LRHsFAthlL~~Gadlr~vQe 232 (247)
T PRK02436 153 GKRVLPLPEALLPFLEQILNGKEVYLFEHKGKPYSRQWFFNQLKSFVNSIGYPGLTAQKLREQFILKQKEAGKSIYELAR 232 (247)
T ss_pred EEEEEECCHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 07875467999999999871586501168999667999999999999974999998710099999999987999999998
Q ss_pred HHCCCCHHHHHHHHH
Q ss_conf 964999899999999
Q gi|254780134|r 310 TYGWKTVDQAETYTK 324 (348)
Q Consensus 310 ~lGHss~~~t~~Y~~ 324 (348)
T Consensus 233 LLGH~sisTTqiY~k 247 (247)
T PRK02436 233 LLGLKTPVTLEKYYK 247 (247)
T ss_pred HHCCCCHHHHHHHCC
T ss_conf 808998788553069