HHsearch alignment for GI: 254780134 and conserved domain: PRK09871

>PRK09871 tyrosine recombinase; Provisional.
Probab=99.97  E-value=1.1e-29  Score=211.63  Aligned_cols=156  Identities=17%  Similarity=0.166  Sum_probs=134.2

Q ss_pred             CCCCCCHHHHHHHHHHHC---CCCHHHHHHHHHHHCCCCCCCCCCCCCCEEE--EECCCCCCCCCHHHHHHCCHHHHHHH
Q ss_conf             421165234456666403---7808999989898618873100256640144--30233211331024331121689999
Q gi|254780134|r  170 GIRPWTKEDMQQFKSFWS---EGSQPRLAFEFLLYSGLRCSDSCRAGVQHLQ--NNIFSIKTQKTGTIITVELPDGFMKL  244 (348)
Q Consensus       170 ~~~~~t~~ei~~~~~~~~---~~~~~~~~~~l~~~TG~R~~Ei~~L~~~did--~~~i~~~~~Kt~~~~~vpl~~~l~~~  244 (348)
T Consensus         3 ~~ryLt~~Ev~~Ll~a~~~~~~~~Rd~aii~ll~~tGlR~sEl~~L~~~Did~~~~~i~i~~~k~g~~~~~pl~~~~~~~   82 (198)
T PRK09871          3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREA   82 (198)
T ss_pred             CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCHHHCCCCCCEEEEEECCCCEEEEEECCHHHHHH
T ss_conf             66769999999998441439854489999999999786899997888877587799699997899748987486999999


Q ss_pred             HHHH---------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC--CCCCHHHHHHHHHHHHCCCCHHHHHHHHCC
Q ss_conf             9642---------01332211222457758778999999999983889--981402699999999848998899999649
Q gi|254780134|r  245 LAMT---------PIGKETFFINNDKQKMNATQFSIWFKAKATKAGVN--KSAHGVRKFSATISADAGATAHELMATYGW  313 (348)
Q Consensus       245 l~~~---------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~agi~--~~~H~lRht~at~l~~~G~~~~~i~~~lGH  313 (348)
T Consensus        83 l~~~~~~r~~~~~~~~~~~lF~s~~G~~ls~~~~~~~ik~~~~~aG~~~~~~pH~LRHTfAt~Ll~~G~dl~~Iq~lLGH  162 (198)
T PRK09871         83 VERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGH  162 (198)
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCC
T ss_conf             99999987775126778841435889947999999999999998499988899855799999999869999999999389


Q ss_pred             CCHHHHHHHHHH
Q ss_conf             998999999999
Q gi|254780134|r  314 KTVDQAETYTKG  325 (348)
Q Consensus       314 ss~~~t~~Y~~~  325 (348)
T Consensus       163 ssi~TT~~Yth~  174 (198)
T PRK09871        163 RNIRHTVRYTAS  174 (198)
T ss_pred             CCHHHHHHHHCC
T ss_conf             977899998858