HHsearch alignment of GI: 254780134 and MMDB domain: 1xo0_A_115-310
>1xo0_A (A:115-310) Recombinase CRE; CRE recombinase, holliday junction, recombination,complex (recombinase/DNA), hydrolase, ligase/DNA complex; 2.00A {Enterobacteria phage P1}
Probab=99.84 E-value=5.6e-22 Score=160.97 Aligned_cols=154 Identities=16% Similarity=0.169 Sum_probs=110.9
Q ss_pred CCCCHHHHHHHHHHHCCC-----CHHHHHHHHHHHCCCCCCCCCCCCCCEEEE--ECCCCCC------CCCHHHHHHCCH
Q ss_conf 116523445666640378-----089999898986188731002566401443--0233211------331024331121
Q gi|254780134|r 172 RPWTKEDMQQFKSFWSEG-----SQPRLAFEFLLYSGLRCSDSCRAGVQHLQN--NIFSIKT------QKTGTIITVELP 238 (348)
Q Consensus 172 ~~~t~~ei~~~~~~~~~~-----~~~~~~~~l~~~TG~R~~Ei~~L~~~did~--~~i~~~~------~Kt~~~~~vpl~ 238 (348)
+++|.+|+.++++.+... ...++++.|+++||||.+|+++|+|+||+. +.+.+.. .+......+|+.
T Consensus 2 r~lt~~e~~~l~~~~~~~~~~~~~r~~~~~~l~~~tG~R~~Ei~~L~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (196)
T 1xo0_A 2 LAFERTDFDQVRSLMENSDRCQDIRNLAFLGIAYNTLLKIAEIARIRVKDISRTDGGRMLIHIGRTKTLVSTAGVEKALS 81 (196)
T ss_dssp CCCCHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHCCCHHHHHHCBGGGEEEEETTEEEEEECCCCSSSSCSCEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEHH
T ss_conf 43017888899986403024678999999974223566676653101222222210011000000012456662120047
Q ss_pred HHHHHHHHHHCCC------------------------CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC--CCCCHHHHH
Q ss_conf 6899999642013------------------------32211222457758778999999999983889--981402699
Q gi|254780134|r 239 DGFMKLLAMTPIG------------------------KETFFINNDKQKMNATQFSIWFKAKATKAGVN--KSAHGVRKF 292 (348)
Q Consensus 239 ~~l~~~l~~~~~~------------------------~~~~~~~~~g~~~~~~~~~~~~~~~~~~agi~--~~~H~lRht 292 (348)
+.....+...... ...++.+..+.+.+..++...++..+...|++ .++|+||||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~lRht 161 (196)
T 1xo0_A 82 LGVTKLVERWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSTRALEGIFEATHRLIYGAKDDSGQRYLAWSGHSARVG 161 (196)
T ss_dssp HHHHHHHHHHHHHHCGGGSTTSBSSCEECTTSCEECCSSCCCCHHHHHHHHHHHHHHHHCSCCCSCCSCSSCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
T ss_conf 88999999888872122112201222134321245433564311588888899999999999972888888788613899
Q ss_pred HHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 999999848998899999649998999999999
Q gi|254780134|r 293 SATISADAGATAHELMATYGWKTVDQAETYTKG 325 (348)
Q Consensus 293 ~at~l~~~G~~~~~i~~~lGHss~~~t~~Y~~~ 325 (348)
|||.+.+.|+++.+|+++|||+|..||++|.+.
T Consensus 162 ~at~l~~~g~~~~~i~~~lGH~~~~~t~~Y~~~ 194 (196)
T 1xo0_A 162 AARDMARAGVSIPEIMQAGGWTNVNIVMNYIRN 194 (196)
T ss_dssp HHHHHHHTTCCHHHHHHHHTCSSSSSHHHHSTT
T ss_pred HHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHC
T ss_conf 999999878999999988199988999999725