HHsearch alignment of GI: 254780134 and MMDB domain: 1z1b_A_75-166
>1z1b_A (A:75-166) Integrase; protein-DNA complex, DNA binding protein/DNA complex; HET: PTR; 3.80A {Enterobacteria phage lambda}
Probab=99.45 E-value=8.5e-13 Score=101.28 Aligned_cols=90 Identities=21% Similarity=0.197 Sum_probs=85.6
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHH
Q ss_conf 7899999999835543569788999999999999995699958969999999887515--99789999999999999644
Q gi|254780134|r 70 TLKWLISEYRKSAHWGSLAVNSRISFESYFDQIIRKSGDFDYRKITTKHIRSGVESRK--HTPSSAIQFLTSMRVLFKWA 147 (348)
Q Consensus 70 Tl~~l~~~y~~~~~~~~l~~~T~~~~~~~~~~~~~~~g~~~l~~it~~~i~~~~~~~~--~~~~t~n~~~~~l~~~~~~a 147 (348)
||+++++.|+...+..+++++|...|+..++++.+.+|+.++.+|++.+|+.|++.+. .++++++++++.|+++|+||
T Consensus 1 T~~~~~~~~~~~~~~~~~s~~T~~~y~~~~~~~~~~~g~~~i~~i~~~~i~~~~~~~~~~~s~~t~~~~~~~l~~~~~~a 80 (92)
T 1z1b_A 1 TLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREA 80 (92)
T ss_dssp BHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHSCSCBGGGCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 29999999999986457888799999999999999976898788129999999999985137999999999976656421
Q ss_pred HHHHHHHHHHHH
Q ss_conf 552001056651
Q gi|254780134|r 148 VRQEYVAINPCL 159 (348)
Q Consensus 148 ~~~~~i~~NP~~ 159 (348)
++.|++..||+.
T Consensus 81 v~~~~i~~NP~a 92 (92)
T 1z1b_A 81 IAEGHITTNHVA 92 (92)
T ss_dssp HHTTSCSSCTTT
T ss_pred HHCCCCCCCCCC
T ss_conf 100123332222