HHsearch alignment of GI: 254780134 and MMDB domain: 2oxo_A_
>2oxo_A (A:) Integrase; DNA-binding protein, four-helix bundle, DNA binding protein; 2.00A {Unidentified phage}
Probab=99.57 E-value=1.7e-14 Score=112.40 Aligned_cols=100 Identities=20% Similarity=0.194 Sum_probs=93.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHH
Q ss_conf 87899999999835543569788999999999999995699958969999999887515--9978999999999999964
Q gi|254780134|r 69 TTLKWLISEYRKSAHWGSLAVNSRISFESYFDQIIRKSGDFDYRKITTKHIRSGVESRK--HTPSSAIQFLTSMRVLFKW 146 (348)
Q Consensus 69 ~Tl~~l~~~y~~~~~~~~l~~~T~~~~~~~~~~~~~~~g~~~l~~it~~~i~~~~~~~~--~~~~t~n~~~~~l~~~~~~ 146 (348)
+||+++++.|+......+++++|+..|...++++.+.+|+.++.+|++.||++|++.+. .++.|+++.++.|+++|+|
T Consensus 1 it~~~~~~~~~~~~~~~~~s~~T~~~y~~~~~~~~~~~~~~~i~~i~~~~i~~~~~~l~~~~s~~t~~~~~~~l~~~f~~ 80 (103)
T 2oxo_A 1 MTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFRE 80 (103)
T ss_dssp CBHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHSCSCBGGGCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 95999999999999886999999999999999999998549866625899999999999861605545679999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 4552001056651034643244
Q gi|254780134|r 147 AVRQEYVAINPCLSVERPKRKT 168 (348)
Q Consensus 147 a~~~~~i~~NP~~~v~~~~~~~ 168 (348)
|++.|+++.||+.+|+.++.+.
T Consensus 81 a~~~g~i~~NP~~~i~~~k~~~ 102 (103)
T 2oxo_A 81 AIAEGHITTNHVAATRAAKSEV 102 (103)
T ss_dssp HHHTTSCSSCTTC---------
T ss_pred HHHCCCCCCCCHHHCCCCCCCC
T ss_conf 9983985679342267678777