HHsearch results for GI: 254780134 and protein with PDBid: 2h7g_X
>2h7g_X DNA topoisomerase 1; type IB topoisomerase, DNA binding, protein-DNA complex, isomerase/DNA complex; HET: DNA; 1.90A {Variola virus} PDB: 2h7f_X* 3igc_A* 1a41_A
Probab=91.53 E-value=0.33 Score=24.92 Aligned_cols=121 Identities=13% Similarity=0.094 Sum_probs=67.4
Q ss_pred HHHHHHHCCCCCC-----------CCCCCCCCEEE--EECCCCC-CCCCHHHHHHCC--HHHHHHHHHHHCCC-C-CCCC
Q ss_conf 9898986188731-----------00256640144--3023321-133102433112--16899999642013-3-2211
Q gi|254780134|r 195 AFEFLLYSGLRCS-----------DSCRAGVQHLQ--NNIFSIK-TQKTGTIITVEL--PDGFMKLLAMTPIG-K-ETFF 256 (348)
Q Consensus 195 ~~~l~~~TG~R~~-----------Ei~~L~~~did--~~~i~~~-~~Kt~~~~~vpl--~~~l~~~l~~~~~~-~-~~~~ 256 (348)
++.|+-.|.+|+| -+..|+..||. ++.|.+. ..|.|....+-+ .+.+...|...... + ..++
T Consensus 120 ~v~Lld~~~iRVGne~Ya~~N~SyGlTTLr~rHV~v~g~~i~f~F~GK~Gv~~~~~i~~d~~l~~~l~~~~~~~~~~~~l 199 (314)
T 2h7g_X 120 FMLMETMFFIRFGKMKYLKENETVGLLTLKNKHIEISPDKIVIKFVGKDKVSHEFVVHKSNRLYKPLLKLTDDSSPEEFL 199 (314)
T ss_dssp HHHHHHHHCCCCCCHHHHHHHCCCCSTTCBGGGEEEETTEEEEEEECGGGCEEEEEEETTSTTHHHHHHHCCTTCTTSBS
T ss_pred HHHHHHHHCEECCCHHHHHCCCCCCEEEEECCCEEEECCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHEE
T ss_conf 99999862241577432220598150020101177879979999875888458999626589999999997557810157
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC--------CC-----------CHHHHHHHHCCCCHH
Q ss_conf 22245775877899999999998388998140269999999984--------89-----------988999996499989
Q gi|254780134|r 257 INNDKQKMNATQFSIWFKAKATKAGVNKSAHGVRKFSATISADA--------GA-----------TAHELMATYGWKTVD 317 (348)
Q Consensus 257 ~~~~g~~~~~~~~~~~~~~~~~~agi~~~~H~lRht~at~l~~~--------G~-----------~~~~i~~~lGHss~~ 317 (348)
+ .....+.++..++ ..+ .+..+||-..||.++.. .. -+.+++..|||+..-
T Consensus 200 f----~~v~~~~vn~~l~----~~~--~taKdFRTw~at~~a~~~l~~~~~~~~~~~~~kk~i~~~i~~vA~~LgNTpaV 269 (314)
T 2h7g_X 200 F----NKLSERKVYESIK----QFG--IRIKDLRTYGVNYTFLYNFWTNVKSISPLPSPKKLIALTIKQTAEVVGHTPSI 269 (314)
T ss_dssp S----TTCCHHHHHHHHG----GGT--SCHHHHHHHHHHHHHHHHHHHHHHHCSSCCCHHHHHHHHHHHHHHHHTCCTTT
T ss_pred E----EECCCHHHHHHHH----HCC--CHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 5----4446267899888----358--40788986462599999998516766756788999999999999983897555
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780134|r 318 QAETYTKG 325 (348)
Q Consensus 318 ~t~~Y~~~ 325 (348)
.-.-|++-
T Consensus 270 cR~sYIhP 277 (314)
T 2h7g_X 270 SKRAYMAT 277 (314)
T ss_dssp HHHHSTHH
T ss_pred HHHHCCCH
T ss_conf 56745799