HHsearch results for GI: 254780134 and protein with PDBid: 2khv_A
>2khv_A Phage integrase; solution structure, GFT, NESG, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Nitrosospira multiformis atcc 25196}
Probab=99.15 E-value=7.7e-11 Score=87.54 Aligned_cols=91 Identities=15% Similarity=0.180 Sum_probs=78.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HHHHHHCCCCHHHCCHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHH
Q ss_conf 87899999999835543569788999999999-99999569995896999999988751-59978999999999999964
Q gi|254780134|r 69 TTLKWLISEYRKSAHWGSLAVNSRISFESYFD-QIIRKSGDFDYRKITTKHIRSGVESR-KHTPSSAIQFLTSMRVLFKW 146 (348)
Q Consensus 69 ~Tl~~l~~~y~~~~~~~~l~~~T~~~~~~~~~-~~~~~~g~~~l~~it~~~i~~~~~~~-~~~~~t~n~~~~~l~~~~~~ 146 (348)
.||++++++|+....-.-.++++...+++.++ ++.|.||++||++|++.+|.++++.+ ..++.++++.++.++.+|+|
T Consensus 1 iTF~evA~~w~~~~~~~w~~~~~~~~~~~~l~~~i~P~iG~~~I~~I~~~~i~~~l~~~~~~~~~tA~r~~~~~~~vf~~ 80 (106)
T 2khv_A 1 MTFSECAALYIKAHRSSWKNTKHADQWTNTIKTYCGPVIGPLSVQDVDTKLIMKVLDPIWEQKPETASRLRGRIESVLDW 80 (106)
T ss_dssp CBHHHHHHHHHHTTGGGGTTSTHHHHHHHHHHHHTHHHHTTSBSSSCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 97999999999985013799889999999999998888299929996889999997999965199999999999999999
Q ss_pred HHHHHHHH-HHHHH
Q ss_conf 45520010-56651
Q gi|254780134|r 147 AVRQEYVA-INPCL 159 (348)
Q Consensus 147 a~~~~~i~-~NP~~ 159 (348)
|+..|++. .||+.
T Consensus 81 Ai~~g~~~~~NPA~ 94 (106)
T 2khv_A 81 ATVRGYREGDNPAR 94 (106)
T ss_dssp HHHHTSSCSCCTTS
T ss_pred HHHCCCCCCCCHHH
T ss_conf 99939867898276