Probab=98.88 E-value=3.5e-09 Score=75.26 Aligned_cols=88 Identities=14% Similarity=0.271 Sum_probs=73.6 Q ss_pred HHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHC--CCCHHHCCHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHH Q ss_conf 99999983554-35697889999999999999956--99958969999999887515---99789999999999999644 Q gi|254780134|r 74 LISEYRKSAHW-GSLAVNSRISFESYFDQIIRKSG--DFDYRKITTKHIRSGVESRK---HTPSSAIQFLTSMRVLFKWA 147 (348) Q Consensus 74 l~~~y~~~~~~-~~l~~~T~~~~~~~~~~~~~~~g--~~~l~~it~~~i~~~~~~~~---~~~~t~n~~~~~l~~~~~~a 147 (348) .++.|+..... +++++.|+..|+..++.|...+. +..+.+|+..+|..|+..+. .+++|.++.++.|+.||+|+ T Consensus 5 ~ie~fl~~l~~erg~S~~Ti~aY~~dl~~f~~~l~~~~~~~~~i~~~~i~~yl~~l~~~g~s~~Ti~r~lsalr~ff~~l 84 (98) T d1a0pa1 5 RIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERLEGGYKATSSARLLSAVRRLFQYL 84 (98) T ss_dssp HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHTSCCTTTCCHHHHHHHHHSCC-------CHHHHHHHHHHHHHHH T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH T ss_conf 99999999998849599999999999999999887616441115589999999999852455105999999999999999 Q ss_pred HHHHHHHHHHHHCC Q ss_conf 55200105665103 Q gi|254780134|r 148 VRQEYVAINPCLSV 161 (348) Q Consensus 148 ~~~~~i~~NP~~~v 161 (348) .++|+++.||+..| T Consensus 85 ~~~~~i~~nP~~~i 98 (98) T d1a0pa1 85 YREKFREDDPSAHL 98 (98) T ss_dssp HHTTSSSSCTTSCC T ss_pred HHCCCCCCCCCCCC T ss_conf 99789376833419
class: All alpha proteins
fold: SAM domain-like
superfamily: lambda integrase-like, N-terminal domain
family: lambda integrase-like, N-terminal domain
domain: Recombinase XerD
species: Escherichia coli [TaxId: 562]