Probab=99.83 E-value=4.7e-20 Score=145.91 Aligned_cols=158 Identities=19% Similarity=0.208 Sum_probs=106.9
Q ss_pred CCCCCCHHHHHHHHHHHCCC-----CHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE-----CCCCCCCCCH---HHHHHC
Q ss_conf 42116523445666640378-----0899998989861887310025664014430-----2332113310---243311
Q gi|254780134|r 170 GIRPWTKEDMQQFKSFWSEG-----SQPRLAFEFLLYSGLRCSDSCRAGVQHLQNN-----IFSIKTQKTG---TIITVE 236 (348)
Q Consensus 170 ~~~~~t~~ei~~~~~~~~~~-----~~~~~~~~l~~~TG~R~~Ei~~L~~~did~~-----~i~~~~~Kt~---~~~~vp 236 (348)
...+++.+|++.+....... .+.++++.|+++||||.+|+++|+|+||+.. .+.+...|+. ....++
T Consensus 4 ~~~~~~~~e~~~~~~~~~~~~~~~~~R~~ali~l~~~tGlR~~Ei~~L~~~di~~~~~~~~~i~i~~~k~~~~~~~~~~~ 83 (214)
T d1f44a2 4 QALAFERTDFDQVRSLMENSDRCQDIRNLAFLGIAYNTLLRIAEIARIRVKDISRTDGGRMLIHIGRTKTLVSTAGVEKA 83 (214)
T ss_dssp CCCCCCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHCCCHHHHHHCBGGGEEECGGGCEEEEECC--------CEEEE
T ss_pred CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEECCCCCCEEEEEEECCCCCCCEECCCC
T ss_conf 46779999999999998624722638999999999998107777875123112023331036666302456433001024
Q ss_pred CHHHHHHHHHHHC-------CCCCC---------CCCCCCCCCCCHHHHHHHHHHH---HHHCC----C---CCCCCHHH
Q ss_conf 2168999996420-------13322---------1122245775877899999999---99838----8---99814026
Q gi|254780134|r 237 LPDGFMKLLAMTP-------IGKET---------FFINNDKQKMNATQFSIWFKAK---ATKAG----V---NKSAHGVR 290 (348)
Q Consensus 237 l~~~l~~~l~~~~-------~~~~~---------~~~~~~g~~~~~~~~~~~~~~~---~~~ag----i---~~~~H~lR 290 (348)
+++.....|.... ..... .+....+.+++...+...++.. ...++ . ..++|+||
T Consensus 84 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~HslR 163 (214)
T d1f44a2 84 LSLGVTKLVERWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSTRALEGIFEATHRLIYGAKDDSGQRYLAWSGHSAR 163 (214)
T ss_dssp CCHHHHHHHHHHHHHHCGGGSTTSBSSCCBCTTSCBCCCSSCCCCHHHHHHHHHHHHHHHHCSCCTTCCTTSSCCTTHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 53668887754455423332322133211001244456433334433233332223222222222011356678666641
Q ss_pred HHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 9999999984899889999964999899999999998
Q gi|254780134|r 291 KFSATISADAGATAHELMATYGWKTVDQAETYTKGAD 327 (348)
Q Consensus 291 ht~at~l~~~G~~~~~i~~~lGHss~~~t~~Y~~~~~ 327 (348)
|||||.|+++|+++.+||.+|||+|..|+++|.+..+
T Consensus 164 ht~at~l~~~G~~~~~i~~~~GH~s~~~~~~Y~~~~~ 200 (214)
T d1f44a2 164 VGAARDMARAGVSIPEIMQAGGWTNVNIVMNFIRNLD 200 (214)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHTCCCHHHHHHHTTTCC
T ss_pred CCCCHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCH
T ss_conf 3300279777999999999968999899999860334
class: Alpha and beta proteins (a+b)
fold: DNA breaking-rejoining enzymes
superfamily: DNA breaking-rejoining enzymes
family: Lambda integrase-like, catalytic core
domain: Cre recombinase
species: Bacteriophage P1 [TaxId: 10678]