BLAST/PSIBLAST alignment of GI: 254780134 and GI: 319409101 at iteration 1
>gi|319409101|emb|CBI82745.1| phage-related integrase/recombinase [Bartonella schoenbuchensis R1] Length = 347
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 183/339 (53%), Gaps = 9/339 (2%)
Query: 8 PPFVTKERTRHGKIIYYFRKGHGRRIRLPYPHEST-FIPAYMSAL---TGSTPKREYINS 63
PP + KE TRHGK I+Y R GHG+R R+ + + F+ Y AL P++ I
Sbjct: 6 PPHLIKEITRHGKTIWYVRIGHGQRYRVYGTYGTQEFVDNYTLALKEAQNGLPRQ--IKR 63
Query: 64 PRKKPTTLKWLISEYRKSAHWGSLAVNSRISFESYFDQIIRKSGDFDYRKITTKHIRSGV 123
R + WL+ +Y +S W + A +++ + + I + G Y+ I +HI V
Sbjct: 64 TRLMEGSFDWLMHQYLQSMQWHNQAESTKKVKQRILNNISQHIGTCSYKSIEKQHILDAV 123
Query: 124 ESRKHTPSSAIQFLTSMRVLFKWAVRQEYVAINPCLSVERPKR-KTEGIRPWTKEDMQQF 182
E R+ TP++A FLT++ LF WAV + NP +++ PK TEG PW +ED+ ++
Sbjct: 124 ERRRETPAAARHFLTALNGLFNWAVDNSLLHRNPAFNIKPPKSFNTEGFSPWLEEDIDKY 183
Query: 183 KSFWSEGSQPRLAFEFLLYSGLRCSDSCRAGVQHLQNNIFSIKTQKTGTIITVELP--DG 240
W G+ R+ + LLY+GLR D R G + + +NI +KT+K+ V LP
Sbjct: 184 HQRWPLGTHERVWIDVLLYTGLRRGDVVRVGWKDVTDNIIHLKTEKSKFQTDVFLPILPE 243
Query: 241 FMKLLAMTPIGKETFFINNDKQKMNATQFSIWFKAKATKAGVNKSAHGVRKFSATISADA 300
K L PIG ETF + +K+ F F+ AG+ KSAHG+RK +AT +A+A
Sbjct: 244 LAKTLEAGPIGNETFICGKEGKKLTKESFGNLFRKACNAAGIKKSAHGLRKLAATRAANA 303
Query: 301 GATAHELMATYGWKTVDQAETYTKGADRIRLGIKNSRRI 339
GAT +L A +GW D A YTK ADR RL I+ +++
Sbjct: 304 GATVSQLKAIFGWTEDDMASLYTKTADRKRLAIEAIKKL 342