RPSBLAST alignment of GI: 254780134 and protein with PDBid: 1z19
>1z19_A Integrase; protein-DNA complex, DNA binding protein/DNA complex; HET: PTR; 2.80A {Enterobacteria phage lambda} PDB: 1p7d_A* Length = 283
Score = 60.7 bits (145), Expect = 5e-10
Identities = 54/283 (19%), Positives = 104/283 (36%), Gaps = 19/283 (6%)
Query: 70 TLKWLISEYRKSAHWGSLAVNSRISFESYFDQIIRKSGDFDYRKITTKHIRSGVESR--K 127
TL + Y K + + I++ S I R D ITTK I + + +
Sbjct: 2 TLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDE 61
Query: 128 HTPSSAIQFLTSMRVLFKWAVRQEYVAINPCLSVERPKRKTEGIRPWTKEDMQQFKSFWS 187
+SA +++ F+ A+ + ++ N + K K R E ++ +++ S
Sbjct: 62 GKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKSKVRRSRLTADEYLKIYQAAES 121
Query: 188 EGSQPRLAFEFLLYSGLRCSDSCRAGVQHLQNNIFSIKTQKTGTIITVELPDGFMKLLA- 246
RLA E + +G R D C + + ++ KTG I + L
Sbjct: 122 SPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHIDALGIS 181
Query: 247 --------MTPIGKETFFINNDKQKMNATQFSIWFKAKATKAGVNK-----SAHGVRKFS 293
+G ET + ++ +++ S +F +G++ + H +R S
Sbjct: 182 MKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLS 241
Query: 294 ATISADAGATAHELMATYGWKTVDQAETYTK--GADRIRLGIK 334
A + + + G K+ A Y G + ++ IK
Sbjct: 242 ARL-YEKQISDKFAQHLLGHKSDTMASQYRDDRGREWDKIEIK 283