BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780135|ref|YP_003064548.1| hypothetical protein
CLIBASIA_00070 [Candidatus Liberibacter asiaticus str. psy62]
         (408 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done


Results from round 1


>gi|254780135|ref|YP_003064548.1| hypothetical protein CLIBASIA_00070 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254039812|gb|ACT56608.1| hypothetical protein CLIBASIA_00070 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 408

 Score =  854 bits (2206), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/408 (100%), Positives = 408/408 (100%)

Query: 1   MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60
           MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV
Sbjct: 1   MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60

Query: 61  IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120
           IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL
Sbjct: 61  IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120

Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180
           PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA
Sbjct: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180

Query: 181 SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE 240
           SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE
Sbjct: 181 SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE 240

Query: 241 NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300
           NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA
Sbjct: 241 NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300

Query: 301 SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR 360
           SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR
Sbjct: 301 SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR 360

Query: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408
           YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS
Sbjct: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408


>gi|254780914|ref|YP_003065327.1| hypothetical protein CLIBASIA_04065 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254780929|ref|YP_003065342.1| hypothetical protein CLIBASIA_04140 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040591|gb|ACT57387.1| hypothetical protein CLIBASIA_04065 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040606|gb|ACT57402.1| hypothetical protein CLIBASIA_04140 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 408

 Score =  744 bits (1921), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/408 (91%), Positives = 381/408 (93%)

Query: 1   MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60
           MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTA LQEVLDHV
Sbjct: 1   MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60

Query: 61  IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120
           IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL
Sbjct: 61  IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120

Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180
           PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA
Sbjct: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180

Query: 181 SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE 240
           SRGKVADS+VH PKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHY SI YWA  
Sbjct: 181 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG 240

Query: 241 NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300
              Y  DN       ++D Y  TWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA
Sbjct: 241 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300

Query: 301 SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR 360
           S +KYMLM AIGNQLSRSSV KE I+++LQDC+YMHK HRTGR AITIFSVGFSPDQDTR
Sbjct: 301 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR 360

Query: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408
           YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS
Sbjct: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408


>gi|254781007|ref|YP_003065420.1| hypothetical protein CLIBASIA_04540 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040684|gb|ACT57480.1| hypothetical protein CLIBASIA_04540 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 411

 Score =  743 bits (1917), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/408 (91%), Positives = 380/408 (93%)

Query: 1   MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60
           MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTA LQEVLDHV
Sbjct: 1   MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60

Query: 61  IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120
           IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSN GSIESIVKDAVILTKNVNSL
Sbjct: 61  IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNTGSIESIVKDAVILTKNVNSL 120

Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180
           PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA
Sbjct: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180

Query: 181 SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE 240
           SRGKVADS+VH PKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHY SI YWA  
Sbjct: 181 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG 240

Query: 241 NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300
              Y  DN       ++D Y  TWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA
Sbjct: 241 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300

Query: 301 SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR 360
           S +KYMLM AIGNQLSRSSV KE I+++LQDC+YMHK HRTGR AITIFSVGFSPDQDTR
Sbjct: 301 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR 360

Query: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408
           YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS
Sbjct: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408


>gi|315122409|ref|YP_004062898.1| hypothetical protein CKC_03305 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495811|gb|ADR52410.1| hypothetical protein CKC_03305 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 411

 Score =  219 bits (559), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 138/416 (33%), Positives = 216/416 (51%), Gaps = 21/416 (5%)

Query: 1   MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60
           MF  +NFL    RL  CT G FL+++A+LLSSF+ I+D++ D   +++   +LQ  +D+ 
Sbjct: 1   MFYYRNFLSVFSRLNHCTNGSFLIVSAVLLSSFLTIMDIMRDYTDMIRVRNMLQSSIDYA 60

Query: 61  IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120
           ++  +P  L       R+  I+ +I   L++     L     I+ IV  + +     +  
Sbjct: 61  LH-NNPNELSVGTIKQREMLIKKRIGYFLDSNYKGTLLTEEQIKLIVNQSTVSITERSFY 119

Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180
           P QF ++I L   +QL+  +L M    K   +IS+RK  +YK+N+ LM++PF W G W+ 
Sbjct: 120 PQQFHINIELHKNIQLKSLILHMAMNPKKDFNISQRKSSLYKKNVALMVVPFTWTGEWIP 179

Query: 181 SR---GKVADSQVHRPKYLEYSHYYQ-QYLN-RNTLVKNFLSQIPYKNFCMAPYHYKSIF 235
                 +   SQ   P  L+  H+ + +Y N RN   K FLS+I   N C+APYHY +I 
Sbjct: 180 PSLFTTQFTVSQDLLPSDLKTEHFKKTEYFNKRNQFFKMFLSKIKENNLCIAPYHYSAIV 239

Query: 236 YWAFENFQYHQDNNMLIFYSHRDF----YRITWDHFPYSFIKNVF---DMTSNQFGDGQV 288
           YW+   F Y    +    YS RD     Y   WD  P ++I ++F   ++ SN+      
Sbjct: 240 YWSEGIFSYKLPFSTTFLYSFRDIYVKQYSTIWDMKPSNYILDLFAGAELHSNR------ 293

Query: 289 LTNTNHCFPHGASHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHH-RTGRGAIT 347
           LT  + CF  G    K+ML+ A GNQ+S      E   ++   C  M K+  +  +  IT
Sbjct: 294 LTPADPCFRRGVIQKKFMLIIAAGNQISDRKNSAEYF-KMKHGCTLMGKNMGKNPQEEIT 352

Query: 348 IFSVGFSPDQDTRYTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTI 403
           ++S+G SPD DT+  L QC   P +YYEI S +++ P+   L RN+ + W   F+I
Sbjct: 353 VYSLGISPDPDTKRDLIQCTRHPDRYYEIQSYKDIAPVIDRLERNISSVWNDGFSI 408


>gi|294875617|ref|XP_002767406.1| synaptojanin, putative [Perkinsus marinus ATCC 50983]
 gi|239868969|gb|EER00124.1| synaptojanin, putative [Perkinsus marinus ATCC 50983]
          Length = 805

 Score = 41.2 bits (95), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 27/127 (21%)

Query: 62  YRTSPKNLYDLREA---GRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVN 118
           Y +SP  L D  +A   GR + +R     A   YN R L ++G + + V+  ++L     
Sbjct: 242 YISSPTPLSDYLDAILIGRRSCLR-----AGTRYNHRGLDDLGDVANFVETELLLCNR-- 294

Query: 119 SLPLQFTVDIALSTTVQLRGSLLQMFSQSKG------KVDISRRKKVM---YKQNIGLMI 169
                   D+ L+  +Q+RGS+   +SQ+ G      ++DI+R K++    Y ++I  +I
Sbjct: 295 --------DVVLAAHIQIRGSVPVFWSQNPGSNSSTQQLDITRSKEMTVLGYDKHISSLI 346

Query: 170 MPFAWDG 176
             +  DG
Sbjct: 347 KRYGPDG 353


>gi|315122199|ref|YP_004062688.1| hypothetical protein CKC_02245 [Candidatus Liberibacter
          solanacearum CLso-ZC1]
 gi|313495601|gb|ADR52200.1| hypothetical protein CKC_02245 [Candidatus Liberibacter
          solanacearum CLso-ZC1]
          Length = 463

 Score = 36.6 bits (83), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 1  MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQV 44
          M  NK+      RLKKC  G F VI+A+LL     ++ +++D V
Sbjct: 1  MVFNKSLFFNFKRLKKCYNGSFFVISALLLPVIFMVIGLLIDLV 44


Searching..................................................done


Results from round 2





CONVERGED!
>gi|254780135|ref|YP_003064548.1| hypothetical protein CLIBASIA_00070 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254039812|gb|ACT56608.1| hypothetical protein CLIBASIA_00070 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 408

 Score =  689 bits (1777), Expect = 0.0,   Method: Composition-based stats.
 Identities = 408/408 (100%), Positives = 408/408 (100%)

Query: 1   MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60
           MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV
Sbjct: 1   MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60

Query: 61  IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120
           IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL
Sbjct: 61  IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120

Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180
           PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA
Sbjct: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180

Query: 181 SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE 240
           SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE
Sbjct: 181 SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE 240

Query: 241 NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300
           NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA
Sbjct: 241 NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300

Query: 301 SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR 360
           SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR
Sbjct: 301 SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR 360

Query: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408
           YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS
Sbjct: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408


>gi|254780914|ref|YP_003065327.1| hypothetical protein CLIBASIA_04065 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254780929|ref|YP_003065342.1| hypothetical protein CLIBASIA_04140 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040591|gb|ACT57387.1| hypothetical protein CLIBASIA_04065 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040606|gb|ACT57402.1| hypothetical protein CLIBASIA_04140 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 408

 Score =  667 bits (1721), Expect = 0.0,   Method: Composition-based stats.
 Identities = 373/408 (91%), Positives = 381/408 (93%)

Query: 1   MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60
           MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTA LQEVLDHV
Sbjct: 1   MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60

Query: 61  IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120
           IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL
Sbjct: 61  IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120

Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180
           PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA
Sbjct: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180

Query: 181 SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE 240
           SRGKVADS+VH PKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHY SI YWA  
Sbjct: 181 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG 240

Query: 241 NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300
              Y  DN       ++D Y  TWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA
Sbjct: 241 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300

Query: 301 SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR 360
           S +KYMLM AIGNQLSRSSV KE I+++LQDC+YMHK HRTGR AITIFSVGFSPDQDTR
Sbjct: 301 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR 360

Query: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408
           YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS
Sbjct: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408


>gi|254781007|ref|YP_003065420.1| hypothetical protein CLIBASIA_04540 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040684|gb|ACT57480.1| hypothetical protein CLIBASIA_04540 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 411

 Score =  666 bits (1717), Expect = 0.0,   Method: Composition-based stats.
 Identities = 372/408 (91%), Positives = 380/408 (93%)

Query: 1   MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60
           MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTA LQEVLDHV
Sbjct: 1   MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60

Query: 61  IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120
           IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSN GSIESIVKDAVILTKNVNSL
Sbjct: 61  IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNTGSIESIVKDAVILTKNVNSL 120

Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180
           PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA
Sbjct: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180

Query: 181 SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE 240
           SRGKVADS+VH PKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHY SI YWA  
Sbjct: 181 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG 240

Query: 241 NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300
              Y  DN       ++D Y  TWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA
Sbjct: 241 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300

Query: 301 SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR 360
           S +KYMLM AIGNQLSRSSV KE I+++LQDC+YMHK HRTGR AITIFSVGFSPDQDTR
Sbjct: 301 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR 360

Query: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408
           YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS
Sbjct: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408


>gi|315122409|ref|YP_004062898.1| hypothetical protein CKC_03305 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495811|gb|ADR52410.1| hypothetical protein CKC_03305 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 411

 Score =  582 bits (1500), Expect = e-164,   Method: Composition-based stats.
 Identities = 138/416 (33%), Positives = 216/416 (51%), Gaps = 21/416 (5%)

Query: 1   MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60
           MF  +NFL    RL  CT G FL+++A+LLSSF+ I+D++ D   +++   +LQ  +D+ 
Sbjct: 1   MFYYRNFLSVFSRLNHCTNGSFLIVSAVLLSSFLTIMDIMRDYTDMIRVRNMLQSSIDYA 60

Query: 61  IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120
           ++  +P  L       R+  I+ +I   L++     L     I+ IV  + +     +  
Sbjct: 61  LH-NNPNELSVGTIKQREMLIKKRIGYFLDSNYKGTLLTEEQIKLIVNQSTVSITERSFY 119

Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180
           P QF ++I L   +QL+  +L M    K   +IS+RK  +YK+N+ LM++PF W G W+ 
Sbjct: 120 PQQFHINIELHKNIQLKSLILHMAMNPKKDFNISQRKSSLYKKNVALMVVPFTWTGEWIP 179

Query: 181 SR---GKVADSQVHRPKYLEYSHYYQ-QYLN-RNTLVKNFLSQIPYKNFCMAPYHYKSIF 235
                 +   SQ   P  L+  H+ + +Y N RN   K FLS+I   N C+APYHY +I 
Sbjct: 180 PSLFTTQFTVSQDLLPSDLKTEHFKKTEYFNKRNQFFKMFLSKIKENNLCIAPYHYSAIV 239

Query: 236 YWAFENFQYHQDNNMLIFYSHRDF----YRITWDHFPYSFIKNVF---DMTSNQFGDGQV 288
           YW+   F Y    +    YS RD     Y   WD  P ++I ++F   ++ SN+      
Sbjct: 240 YWSEGIFSYKLPFSTTFLYSFRDIYVKQYSTIWDMKPSNYILDLFAGAELHSNR------ 293

Query: 289 LTNTNHCFPHGASHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHH-RTGRGAIT 347
           LT  + CF  G    K+ML+ A GNQ+S      E   ++   C  M K+  +  +  IT
Sbjct: 294 LTPADPCFRRGVIQKKFMLIIAAGNQISDRKNSAEYF-KMKHGCTLMGKNMGKNPQEEIT 352

Query: 348 IFSVGFSPDQDTRYTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTI 403
           ++S+G SPD DT+  L QC   P +YYEI S +++ P+   L RN+ + W   F+I
Sbjct: 353 VYSLGISPDPDTKRDLIQCTRHPDRYYEIQSYKDIAPVIDRLERNISSVWNDGFSI 408


>gi|315122199|ref|YP_004062688.1| hypothetical protein CKC_02245 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495601|gb|ADR52200.1| hypothetical protein CKC_02245 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 463

 Score = 43.1 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 57/144 (39%), Gaps = 11/144 (7%)

Query: 1   MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60
           M  NK+      RLKKC  G F VI+A+LL     ++ +++D V        L + ++  
Sbjct: 1   MVFNKSLFFNFKRLKKCYNGSFFVISALLLPVIFMVIGLLIDLVRWGYYHNSLVQAVNTA 60

Query: 61  IYRTSPKNLYDLREAGRDNFIRHQIE------KALNTYNSRDLSNIGSIESIVKDAVILT 114
               S + L  + +  ++  +   +         LN       +N G ++S     +I  
Sbjct: 61  ALSASVQLLNSVEDKSKEKALSSVLGENNIKQYLLNNLKISLYNNFGEMDS---QRIIQH 117

Query: 115 KNVNSLPLQFT--VDIALSTTVQL 136
             VN    + T  +++     + L
Sbjct: 118 TKVNIYNRKGTHIINVYSHYNLPL 141


>gi|226499930|ref|NP_001141473.1| hypothetical protein LOC100273583 [Zea mays]
 gi|194704720|gb|ACF86444.1| unknown [Zea mays]
          Length = 504

 Score = 40.1 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 37/95 (38%), Gaps = 2/95 (2%)

Query: 232 KSIFYWAFENFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTN 291
             + + + E        N     +    Y  ++ +F  +  ++ F       G  +  T 
Sbjct: 208 AQLAFVSDEVLPPKLSYNYTFIETTYTLYTNSFLNFGQNAAQDSFHEMLRSRGSSENATL 267

Query: 292 TNHCFPHGASHSKYMLMFAIGNQLSRSSVGKETID 326
            + C P G S ++ M++   G   SRS++  + +D
Sbjct: 268 ADPCAPRGYSRNEEMMLRMSG--ASRSTLENQYVD 300


>gi|194701456|gb|ACF84812.1| unknown [Zea mays]
          Length = 374

 Score = 39.7 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 37/95 (38%), Gaps = 2/95 (2%)

Query: 232 KSIFYWAFENFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTN 291
             + + + E        N     +    Y  ++ +F  +  ++ F       G  +  T 
Sbjct: 78  AQLAFVSDEVLPPKLSYNYTFIETTYTLYTNSFLNFGQNAAQDSFHEMLRSRGSSENATL 137

Query: 292 TNHCFPHGASHSKYMLMFAIGNQLSRSSVGKETID 326
            + C P G S ++ M++   G   SRS++  + +D
Sbjct: 138 ADPCAPRGYSRNEEMMLRMSG--ASRSTLENQYVD 170


>gi|220906794|ref|YP_002482105.1| signal transduction histidine kinase [Cyanothece sp. PCC 7425]
 gi|219863405|gb|ACL43744.1| signal transduction histidine kinase [Cyanothece sp. PCC 7425]
          Length = 1560

 Score = 39.3 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 57/174 (32%), Gaps = 30/174 (17%)

Query: 103  IESIVKDAVILTKNVNSLPLQFTVDIALSTTVQLRGSLLQMFSQSKG----KVDISRRKK 158
            ++ +     I     N       ++ +L   VQ R + LQM   +      + D+S   +
Sbjct: 975  LQQLANQVGIAIYQANLYQQVQQLNQSLEEQVQERTAQLQMALSATSMGTWEWDLSNNVE 1034

Query: 159  VMYKQNIGLMIMP-------FAWDGYWL--ASRGKVADSQVHRPKYLEYSHYYQQYLNRN 209
               +Q+ GLM          F  DG  +       +  S VH P  LEY    Q    R 
Sbjct: 1035 RWSEQSYGLMGYQVDQQGNIFDLDGQAVNTPPSHNLFLSHVH-PDDLEYLERVQTQSLRE 1093

Query: 210  TLVKNFLSQIPYKNFCMAPYHYKSIFYWAFENFQYHQDNNMLIFYSHRDFYRIT 263
                             AP+ Y+  F W+  +  +       IF +H    R  
Sbjct: 1094 Q----------------APFEYEFRFVWSDGSIHWCYTRGAYIFDAHGQPLRAV 1131


>gi|326674126|ref|XP_003200076.1| PREDICTED: integrin alpha-E-like [Danio rerio]
          Length = 940

 Score = 38.9 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 12/88 (13%)

Query: 318 SSVGKETIDRILQDCYYMHKHH-------RTGRGAITIFSVGFS----PDQDTRYTLRQC 366
           S    E I  +L D   +           +T    +T +S+G       ++D    + Q 
Sbjct: 273 SKNNSEKIIIVLSDGKILGDPMTLDEVLNKTQMKGVTRYSIGVGDGILKNKDAIKEMTQI 332

Query: 367 ASDPSKYYEINSDENVMPIAKSLARNVI 394
           A DP KYY ++S   +  I  SL R +I
Sbjct: 333 A-DPGKYYSVSSYGALNDILSSLERGII 359


>gi|150866507|ref|XP_001386136.2| putative transcription factor [Scheffersomyces stipitis CBS 6054]
 gi|149387763|gb|ABN68107.2| putative transcription factor [Scheffersomyces stipitis CBS 6054]
          Length = 649

 Score = 37.8 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 104/293 (35%), Gaps = 44/293 (15%)

Query: 57  LDHVIYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKN 116
           L+ +   +    +   +E   DN IR +I K +N  ++  L N+G          +   N
Sbjct: 290 LEFINEFSHKTKMNISQEVNLDNLIRERIYKFININSNYWLINLG----------LSNNN 339

Query: 117 VNSLPLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDG 176
            N     + ++ + +  +  + S    +  S  K+ + + K     +N+ ++I       
Sbjct: 340 YNGFTQDYIINKSSNIDILNKTSEGDHYINSLLKISMIQSK---LNENMNILI------- 389

Query: 177 YWLASRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQI---PYKNFCMAPYHYKS 233
                 G  ++S    P  L  S       N   ++ + L++I      +  +      S
Sbjct: 390 ------GNNSESVSLLPNQLNTSKLIN--FNMFEIIIDDLNKILVRDDNSLVLNNLIKIS 441

Query: 234 IFYWAFENFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTN 293
           I +   + F Y    + +    ++        H+    +K+ F + S+QF D  +  N  
Sbjct: 442 IEFSKLQLFVYSLSKSDITILEYK--------HYITKVLKSCFIIFSSQFQDNSLNFNQL 493

Query: 294 HCFPHGASHSKYMLMF-----AIGNQLSRSSVGKETIDRILQDCYYMHKHHRT 341
                       ++M       I N +S   + KE  +++  +     K++  
Sbjct: 494 PIHYKFPIELAMLIMLRVFKSPIMNSISDYKLVKEKFNQMYDNIIMGGKNNED 546


>gi|326679371|ref|XP_690846.5| PREDICTED: interferon-induced very large GTPase 1 [Danio rerio]
          Length = 1700

 Score = 37.8 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 68/167 (40%), Gaps = 19/167 (11%)

Query: 46   VMQKTALLQEVLDHVIYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDL--SNIGSI 103
            +++  A  Q+    +IY T+P+  +        NFIR ++ + +     +++      S 
Sbjct: 1403 ILKTLAEKQDFRAFIIYITNPREHF-------KNFIRDEVNQFVTKTFEKNVRPKMENST 1455

Query: 104  ESIVKDAVILTKNVNSLPLQFTVDIAL---STTVQLRGSLLQMFSQ----SKGKVDISRR 156
            + + +      +  +    +   ++ L     T QL G L+   S     ++G  ++S  
Sbjct: 1456 KVLEQQITNAARESSKYVKETDGNVGLWLRHFTQQLSGVLIFSESDLIGVNQGDANVSFL 1515

Query: 157  KKVMYKQNIGLMIMPFAWDGYWLASRGKVADSQVHRPKYLEYSHYYQ 203
            + V+ K+   L  + F     +   + +V   Q HRP  +   H+ Q
Sbjct: 1516 EDVIKKE---LPSIKFDIFSKFRPEKFQVKLEQAHRPDEILIDHFCQ 1559


>gi|222149754|ref|YP_002550711.1| hypothetical protein Avi_3756 [Agrobacterium vitis S4]
 gi|221736736|gb|ACM37699.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 437

 Score = 37.4 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 2/126 (1%)

Query: 13  RLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHVIYRTSPKNLYDL 72
           RL + + G F ++TA+LL   + +  + +D   ++Q  + LQ  +D      +      +
Sbjct: 41  RLLRHSGGNFGMMTAVLLPVSIGVAGLAMDATEMVQSRSALQSSVDAAALAAASAMSNGM 100

Query: 73  REAGRDNFIRHQIEKALNTYNSRD--LSNIGSIESIVKDAVILTKNVNSLPLQFTVDIAL 130
            EA      +  +   L    +RD   S++  I     D  + T  VNS    + V++  
Sbjct: 101 SEADAIALAKSFLSSQLANTMARDENTSSVDQITQAEPDISVKTTQVNSSSTSYDVELTG 160

Query: 131 STTVQL 136
           S T+ +
Sbjct: 161 SYTITM 166


>gi|328713142|ref|XP_001951374.2| PREDICTED: nipped-B-like protein [Acyrthosiphon pisum]
          Length = 1920

 Score = 37.4 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 62/191 (32%), Gaps = 11/191 (5%)

Query: 213  KNFLSQIPYKNFCMAPYHYKSIFYWAFENFQYHQDNNMLIFYSHRDFYRITWDHFPYSFI 272
            + FLSQ+      +   H +++            +N    F   RD + I      Y ++
Sbjct: 1247 EIFLSQLEEDAVKLIMKHDQTVILSCISCLGSVVNNVTRNFKLIRDCFGIY-----YKYL 1301

Query: 273  KNVFDMTSNQFGDGQVLTNTNHCFPHGASHSKYMLMFAIGNQLSRSSVGKETIDRILQDC 332
             N   +  ++  + Q L      F         ML F      +   V  +     ++D 
Sbjct: 1302 SNFQKLHQDRQTNPQGLIPLRPIFRRSIYIIGLMLRFF---DFTDKDVYGDAYPENIRDL 1358

Query: 333  YY--MHKHHRTGRGAITIFSV-GFSPDQDTRYTLRQCASDPSKYYEINSDENVMPIAKSL 389
             Y  M     T      +F++          Y    C    + Y +I S+ +V  I KS 
Sbjct: 1359 VYDIMSYFMHTNEDDTKLFALKAIGSICIRHYDFMLCQDLMNTYLDILSNNSVPNIMKSQ 1418

Query: 390  ARNVITNWFSQ 400
              N I  +  +
Sbjct: 1419 ILNNIEIYLEE 1429


>gi|193700169|ref|XP_001949866.1| PREDICTED: protein singed-like [Acyrthosiphon pisum]
          Length = 520

 Score = 37.0 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 1/73 (1%)

Query: 295 CFPHGASHSKYMLM-FAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGF 353
           C    A  S+  L+  A   Q++  SVG++    + ++   +H       G  T+F++  
Sbjct: 142 CTAKAAGSSELWLVHLAARPQVNLRSVGRKRFAHLSENLDEIHVDANIPWGEDTLFTLEL 201

Query: 354 SPDQDTRYTLRQC 366
            PD D +Y +  C
Sbjct: 202 RPDDDFKYAIHTC 214


>gi|312902635|ref|ZP_07761840.1| conserved domain protein [Enterococcus faecalis TX0635]
 gi|310633973|gb|EFQ17256.1| conserved domain protein [Enterococcus faecalis TX0635]
          Length = 361

 Score = 37.0 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 15/136 (11%)

Query: 42  DQVTVMQKTALLQEVLDHVIYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIG 101
           D  T+     +L   +  V++        DL E  R   I+ +I   +  Y  +   +  
Sbjct: 111 DLDTMFVAQEMLYNEVGAVVHSNG-----DLTEEQR-MTIKKKINDVIANYEKQPSFHNS 164

Query: 102 SIESIVKDAVILTKNVNSLPLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRR---KK 158
            ++  + ++ +LT    S   QF V    +  V  R S  ++    K   + S     KK
Sbjct: 165 KVKLTLGESTVLTDTNGSNLSQFDVVAQNTANVDFRQSGNKLTITPKSTANSSGTLILKK 224

Query: 159 VMYKQNIGLMIMPFAW 174
            + +        PF W
Sbjct: 225 SLREGT------PFIW 234


>gi|15891094|ref|NP_356766.1| hypothetical protein Atu3868 [Agrobacterium tumefaciens str. C58]
 gi|15159433|gb|AAK89551.1| hypothetical protein Atu3868 [Agrobacterium tumefaciens str. C58]
          Length = 412

 Score = 36.6 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 48/130 (36%), Gaps = 15/130 (11%)

Query: 18  TRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEV------LDHVIYRTSPKNLYD 71
           T G F ++TAILL   + +    ++   VMQ  A +Q              R     L D
Sbjct: 17  TSGNFGMMTAILLPVLLGVAGAGMELANVMQVKADMQNTADSAALAAATEARLREGKLSD 76

Query: 72  LREAG-RDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSLPLQFTVDIAL 130
            +      NFI  Q+EK        +L+    IE        +T   N+    + V+  +
Sbjct: 77  EQIKEIAKNFIAAQMEK--------NLTAEEKIELEKNSPTRVTTTENARGKTYAVETTI 128

Query: 131 STTVQLRGSL 140
              +QL   L
Sbjct: 129 KHQIQLNPML 138


>gi|197105075|ref|YP_002130452.1| hypothetical protein PHZ_c1612 [Phenylobacterium zucineum HLK1]
 gi|196478495|gb|ACG78023.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 521

 Score = 36.6 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 34/85 (40%)

Query: 311 IGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTRYTLRQCASDP 370
            G  ++ SS  +E    +      +  + +     I I+++       +   L+ CAS  
Sbjct: 432 AGRPITESSSQRERTAALDDRLLKLCANMKAPAKDIEIYAIRVEVSSGSSSVLQTCASSA 491

Query: 371 SKYYEINSDENVMPIAKSLARNVIT 395
             YY++ +  ++    +S+A  +  
Sbjct: 492 DHYYDVQNAADMTMAFQSIAGQIAA 516


  Database: nr
    Posted date:  May 13, 2011  4:10 AM
  Number of letters in database: 999,999,932
  Number of sequences in database:  2,987,209
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 13, 2011  4:17 AM
  Number of letters in database: 999,998,956
  Number of sequences in database:  2,896,973
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 13, 2011  4:23 AM
  Number of letters in database: 999,999,979
  Number of sequences in database:  2,907,862
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 13, 2011  4:29 AM
  Number of letters in database: 999,999,513
  Number of sequences in database:  2,932,190
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 13, 2011  4:33 AM
  Number of letters in database: 792,586,372
  Number of sequences in database:  2,260,650
  
Lambda     K      H
   0.313    0.132    0.370 

Lambda     K      H
   0.267   0.0406    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,827,481,504
Number of Sequences: 13984884
Number of extensions: 261266016
Number of successful extensions: 944976
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 944923
Number of HSP's gapped (non-prelim): 80
length of query: 408
length of database: 4,792,584,752
effective HSP length: 141
effective length of query: 267
effective length of database: 2,820,716,108
effective search space: 753131200836
effective search space used: 753131200836
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.0 bits)
S2: 82 (36.2 bits)