BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780135|ref|YP_003064548.1| hypothetical protein
CLIBASIA_00070 [Candidatus Liberibacter asiaticus str. psy62]
(408 letters)
Database: nr
13,984,884 sequences; 4,792,584,752 total letters
Searching..................................................done
>gi|254780135|ref|YP_003064548.1| hypothetical protein CLIBASIA_00070 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254039812|gb|ACT56608.1| hypothetical protein CLIBASIA_00070 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 408
Score = 855 bits (2208), Expect = 0.0, Method: Composition-based stats.
Identities = 408/408 (100%), Positives = 408/408 (100%)
Query: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60
MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV
Sbjct: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60
Query: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120
IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL
Sbjct: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120
Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180
PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA
Sbjct: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180
Query: 181 SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE 240
SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE
Sbjct: 181 SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE 240
Query: 241 NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300
NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA
Sbjct: 241 NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300
Query: 301 SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR 360
SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR
Sbjct: 301 SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR 360
Query: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408
YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS
Sbjct: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408
>gi|254780914|ref|YP_003065327.1| hypothetical protein CLIBASIA_04065 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254780929|ref|YP_003065342.1| hypothetical protein CLIBASIA_04140 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040591|gb|ACT57387.1| hypothetical protein CLIBASIA_04065 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040606|gb|ACT57402.1| hypothetical protein CLIBASIA_04140 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 408
Score = 748 bits (1931), Expect = 0.0, Method: Composition-based stats.
Identities = 373/408 (91%), Positives = 381/408 (93%)
Query: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60
MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTA LQEVLDHV
Sbjct: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60
Query: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120
IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL
Sbjct: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120
Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180
PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA
Sbjct: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180
Query: 181 SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE 240
SRGKVADS+VH PKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHY SI YWA
Sbjct: 181 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG 240
Query: 241 NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300
Y DN ++D Y TWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA
Sbjct: 241 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300
Query: 301 SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR 360
S +KYMLM AIGNQLSRSSV KE I+++LQDC+YMHK HRTGR AITIFSVGFSPDQDTR
Sbjct: 301 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR 360
Query: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408
YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS
Sbjct: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408
>gi|254781007|ref|YP_003065420.1| hypothetical protein CLIBASIA_04540 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040684|gb|ACT57480.1| hypothetical protein CLIBASIA_04540 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 411
Score = 746 bits (1926), Expect = 0.0, Method: Composition-based stats.
Identities = 372/408 (91%), Positives = 380/408 (93%)
Query: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60
MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTA LQEVLDHV
Sbjct: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60
Query: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120
IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSN GSIESIVKDAVILTKNVNSL
Sbjct: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNTGSIESIVKDAVILTKNVNSL 120
Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180
PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA
Sbjct: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180
Query: 181 SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE 240
SRGKVADS+VH PKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHY SI YWA
Sbjct: 181 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG 240
Query: 241 NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300
Y DN ++D Y TWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA
Sbjct: 241 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300
Query: 301 SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR 360
S +KYMLM AIGNQLSRSSV KE I+++LQDC+YMHK HRTGR AITIFSVGFSPDQDTR
Sbjct: 301 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR 360
Query: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408
YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS
Sbjct: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408
>gi|315122409|ref|YP_004062898.1| hypothetical protein CKC_03305 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495811|gb|ADR52410.1| hypothetical protein CKC_03305 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 411
Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats.
Identities = 138/416 (33%), Positives = 216/416 (51%), Gaps = 21/416 (5%)
Query: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60
MF +NFL RL CT G FL+++A+LLSSF+ I+D++ D +++ +LQ +D+
Sbjct: 1 MFYYRNFLSVFSRLNHCTNGSFLIVSAVLLSSFLTIMDIMRDYTDMIRVRNMLQSSIDYA 60
Query: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120
++ +P L R+ I+ +I L++ L I+ IV + + +
Sbjct: 61 LH-NNPNELSVGTIKQREMLIKKRIGYFLDSNYKGTLLTEEQIKLIVNQSTVSITERSFY 119
Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180
P QF ++I L +QL+ +L M K +IS+RK +YK+N+ LM++PF W G W+
Sbjct: 120 PQQFHINIELHKNIQLKSLILHMAMNPKKDFNISQRKSSLYKKNVALMVVPFTWTGEWIP 179
Query: 181 SR---GKVADSQVHRPKYLEYSHYYQ-QYLN-RNTLVKNFLSQIPYKNFCMAPYHYKSIF 235
+ SQ P L+ H+ + +Y N RN K FLS+I N C+APYHY +I
Sbjct: 180 PSLFTTQFTVSQDLLPSDLKTEHFKKTEYFNKRNQFFKMFLSKIKENNLCIAPYHYSAIV 239
Query: 236 YWAFENFQYHQDNNMLIFYSHRDF----YRITWDHFPYSFIKNVF---DMTSNQFGDGQV 288
YW+ F Y + YS RD Y WD P ++I ++F ++ SN+
Sbjct: 240 YWSEGIFSYKLPFSTTFLYSFRDIYVKQYSTIWDMKPSNYILDLFAGAELHSNR------ 293
Query: 289 LTNTNHCFPHGASHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHH-RTGRGAIT 347
LT + CF G K+ML+ A GNQ+S E ++ C M K+ + + IT
Sbjct: 294 LTPADPCFRRGVIQKKFMLIIAAGNQISDRKNSAEYF-KMKHGCTLMGKNMGKNPQEEIT 352
Query: 348 IFSVGFSPDQDTRYTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTI 403
++S+G SPD DT+ L QC P +YYEI S +++ P+ L RN+ + W F+I
Sbjct: 353 VYSLGISPDPDTKRDLIQCTRHPDRYYEIQSYKDIAPVIDRLERNISSVWNDGFSI 408
>gi|294875617|ref|XP_002767406.1| synaptojanin, putative [Perkinsus marinus ATCC 50983]
gi|239868969|gb|EER00124.1| synaptojanin, putative [Perkinsus marinus ATCC 50983]
Length = 805
Score = 41.6 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 27/127 (21%)
Query: 62 YRTSPKNLYDLREA---GRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVN 118
Y +SP L D +A GR + +R A YN R L ++G + + V+ ++L
Sbjct: 242 YISSPTPLSDYLDAILIGRRSCLR-----AGTRYNHRGLDDLGDVANFVETELLLCNR-- 294
Query: 119 SLPLQFTVDIALSTTVQLRGSLLQMFSQSKG------KVDISRRKKVM---YKQNIGLMI 169
D+ L+ +Q+RGS+ +SQ+ G ++DI+R K++ Y ++I +I
Sbjct: 295 --------DVVLAAHIQIRGSVPVFWSQNPGSNSSTQQLDITRSKEMTVLGYDKHISSLI 346
Query: 170 MPFAWDG 176
+ DG
Sbjct: 347 KRYGPDG 353
>gi|309703206|emb|CBJ02540.1| type III secretion-associated chaperone [Escherichia coli ETEC
H10407]
Length = 163
Score = 40.4 bits (93), Expect = 0.57, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 223 NFCMAPYHYKSIFYWAFENFQYHQDNNMLI-----FYSHRDFYRITWDHFPYSFIKNVFD 277
N A +YK + +AFEN +Y +D+ + + D Y++++++FPY ++
Sbjct: 55 NITDAEIYYKFLCIYAFENHEYLKDSASVCQPKKKYQQAYDLYKLSYNYFPYDDYSVIYR 114
Query: 278 MTSNQFGDGQVLTNTNHCFPH 298
M Q G + + N CF H
Sbjct: 115 MGQCQIG-AKNIDNAMQCFYH 134
>gi|307139534|ref|ZP_07498890.1| putative chaperone [Escherichia coli H736]
gi|331643535|ref|ZP_08344666.1| tetratricopeptide repeat superfamily [Escherichia coli H736]
gi|331037006|gb|EGI09230.1| tetratricopeptide repeat superfamily [Escherichia coli H736]
Length = 163
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 223 NFCMAPYHYKSIFYWAFENFQYHQDNNMLI-----FYSHRDFYRITWDHFPYSFIKNVFD 277
N A +YK + +AFEN +Y +D + + D Y++++++FPY ++
Sbjct: 55 NITDAEIYYKLLCIYAFENHEYLKDFASVCQPKKKYQQAYDLYKLSYNYFPYDDYSVIYR 114
Query: 278 MTSNQFGDGQVLTNTNHCFPH 298
M Q G + + N CF H
Sbjct: 115 MGQCQIG-AKNIDNAMQCFYH 134
>gi|194426171|ref|ZP_03058726.1| tetratricopeptide repeat protein [Escherichia coli B171]
gi|194415479|gb|EDX31746.1| tetratricopeptide repeat protein [Escherichia coli B171]
gi|323160006|gb|EFZ45970.1| tetratricopeptide repeat family protein [Escherichia coli E128010]
gi|323162559|gb|EFZ48409.1| tetratricopeptide repeat family protein [Escherichia coli E128010]
gi|323163408|gb|EFZ49235.1| tetratricopeptide repeat family protein [Escherichia coli E128010]
Length = 163
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 223 NFCMAPYHYKSIFYWAFENFQYHQD-----NNMLIFYSHRDFYRITWDHFPYSFIKNVFD 277
N A +YK + +AFEN +Y +D + + D Y++++++FPY ++
Sbjct: 55 NVTDAEIYYKFLCIYAFENHEYLEDFASVCQSKKKYQQAYDLYKLSYNYFPYDDYSVIYR 114
Query: 278 MTSNQFGDGQVLTNTNHCFPH 298
M Q G + + N CF H
Sbjct: 115 MGQCQIG-AKNIDNAMQCFYH 134
>gi|16130755|ref|NP_417328.1| predicted chaperone [Escherichia coli str. K-12 substr. MG1655]
gi|89109634|ref|AP_003414.1| predicted chaperone [Escherichia coli str. K-12 substr. W3110]
gi|170082419|ref|YP_001731739.1| chaperone [Escherichia coli str. K-12 substr. DH10B]
gi|238901986|ref|YP_002927782.1| putative chaperone [Escherichia coli BW2952]
gi|300950595|ref|ZP_07164497.1| tetratricopeptide repeat protein [Escherichia coli MS 116-1]
gi|300958176|ref|ZP_07170330.1| tetratricopeptide repeat protein [Escherichia coli MS 175-1]
gi|2833400|sp|Q46787|YGEG_ECOLI RecName: Full=Uncharacterized protein ygeG
gi|887802|gb|AAA83033.1| ORF_o163 [Escherichia coli]
gi|1789215|gb|AAC75890.1| predicted chaperone [Escherichia coli str. K-12 substr. MG1655]
gi|85675667|dbj|BAE76920.1| predicted chaperone [Escherichia coli str. K12 substr. W3110]
gi|169890254|gb|ACB03961.1| predicted chaperone [Escherichia coli str. K-12 substr. DH10B]
gi|238862200|gb|ACR64198.1| predicted chaperone [Escherichia coli BW2952]
gi|260448098|gb|ACX38520.1| Tetratricopeptide TPR_3 [Escherichia coli DH1]
gi|300315128|gb|EFJ64912.1| tetratricopeptide repeat protein [Escherichia coli MS 175-1]
gi|300450075|gb|EFK13695.1| tetratricopeptide repeat protein [Escherichia coli MS 116-1]
gi|315137454|dbj|BAJ44613.1| putative chaperone [Escherichia coli DH1]
gi|323935792|gb|EGB32095.1| tetratricopeptide [Escherichia coli E1520]
Length = 163
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 223 NFCMAPYHYKSIFYWAFENFQYHQDNNMLI-----FYSHRDFYRITWDHFPYSFIKNVFD 277
N A +YK + +AFEN +Y +D + + D Y++++++FPY ++
Sbjct: 55 NITDAEIYYKFLCIYAFENHEYLKDFASVCQPKKKYQQAYDLYKLSYNYFPYDDYSVIYR 114
Query: 278 MTSNQFGDGQVLTNTNHCFPH 298
M Q G + + N CF H
Sbjct: 115 MGQCQIG-AKNIDNAMQCFYH 134
>gi|256024648|ref|ZP_05438513.1| putative chaperone [Escherichia sp. 4_1_40B]
Length = 174
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 223 NFCMAPYHYKSIFYWAFENFQYHQDNNMLI-----FYSHRDFYRITWDHFPYSFIKNVFD 277
N A +YK + +AFEN +Y +D + + D Y++++++FPY ++
Sbjct: 66 NITDAEIYYKFLCIYAFENHEYLKDFASVCQPKKKYQQAYDLYKLSYNYFPYDDYSVIYR 125
Query: 278 MTSNQFGDGQVLTNTNHCFPH 298
M Q G + + N CF H
Sbjct: 126 MGQCQIG-AKNIDNAMQCFYH 145
>gi|301026141|ref|ZP_07189615.1| tetratricopeptide repeat protein [Escherichia coli MS 196-1]
gi|299879836|gb|EFI88047.1| tetratricopeptide repeat protein [Escherichia coli MS 196-1]
Length = 154
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 223 NFCMAPYHYKSIFYWAFENFQYHQDNNMLI-----FYSHRDFYRITWDHFPYSFIKNVFD 277
N A HYK + +AFEN +Y +D + + D Y++++++FPY ++
Sbjct: 55 NITDAEIHYKFLCIYAFENHEYLKDFASVCQPKKKYQQAYDLYKLSYNYFPYDDYSVIYR 114
Query: 278 MTSNQFGDGQVLTNTN 293
M Q G +T N
Sbjct: 115 MGQCQIGAKISITQCN 130
>gi|260576512|ref|ZP_05844501.1| conserved hypothetical protein [Rhodobacter sp. SW2]
gi|259021235|gb|EEW24542.1| conserved hypothetical protein [Rhodobacter sp. SW2]
Length = 529
Score = 37.3 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 345 AITIFSVGFSPDQDTRYTLRQCASDPSKYY 374
I IFS+GF ++ R LR CAS PS Y+
Sbjct: 475 GIVIFSIGFEAPENGRNQLRDCASQPSNYF 504
>gi|71278388|ref|YP_270404.1| TonB-dependent receptor [Colwellia psychrerythraea 34H]
gi|71144128|gb|AAZ24601.1| TonB-dependent receptor [Colwellia psychrerythraea 34H]
Length = 994
Score = 37.3 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 235 FYWAFENFQYHQDNNMLIF-YSHRDFYRITWDHFPYSFIKNVFDMTSNQFG----DGQVL 289
F + F F +DN L+F Y+ D IT D Y+F + + TSN G +G+ +
Sbjct: 276 FRYNFTEFDRTRDNGQLVFQYAPSDRITITAD---YTFSEQTVESTSNGIGAWFWEGETI 332
Query: 290 TNTNHCFPHGASHSKYMLMFAIGNQLSRSSVGKETIDR 327
+ + F G +HS + G LS S+ +I++
Sbjct: 333 DGSLNEFTTGTNHSPVVWHSGAGPDLSFSTSSDASINK 370
>gi|156836934|ref|XP_001642506.1| hypothetical protein Kpol_299p8 [Vanderwaltozyma polyspora DSM
70294]
gi|156113043|gb|EDO14648.1| hypothetical protein Kpol_299p8 [Vanderwaltozyma polyspora DSM
70294]
Length = 103
Score = 36.9 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 24/99 (24%)
Query: 183 GKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFENF 242
GK+A +Q KY E+ Y + L+ N L LS++ W +
Sbjct: 22 GKLARTQESTDKYREFKRYILEELHSN-LTDVLLSKLG----------------WTLSDL 64
Query: 243 QYHQD-------NNMLIFYSHRDFYRITWDHFPYSFIKN 274
+Y D + + + +SH+ Y +T + FPY+F +N
Sbjct: 65 KYCNDVMYSSDADKIKVAFSHKSLYELTVNDFPYNFEQN 103
>gi|315122199|ref|YP_004062688.1| hypothetical protein CKC_02245 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495601|gb|ADR52200.1| hypothetical protein CKC_02245 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 463
Score = 36.9 bits (84), Expect = 6.5, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQV 44
M NK+ RLKKC G F VI+A+LL ++ +++D V
Sbjct: 1 MVFNKSLFFNFKRLKKCYNGSFFVISALLLPVIFMVIGLLIDLV 44
>gi|311109895|ref|YP_003982746.1| hypothetical protein AXYL_06747 [Achromobacter xylosoxidans A8]
gi|310764584|gb|ADP20031.1| hypothetical protein AXYL_06747 [Achromobacter xylosoxidans A8]
Length = 201
Score = 36.2 bits (82), Expect = 9.6, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 322 KETIDRILQ----DCYYMHKHHRTGRGAITIFSVGFSPDQDTRYTLRQCAS 368
KE +D++LQ DCY +H H +G+G T+ +PD T +L Q A+
Sbjct: 151 KEAMDQLLQEWHGDCYLVHYDHHSGKGYFTMLDCD-APDSGTVISLSQRAT 200
Database: nr
Posted date: May 13, 2011 4:10 AM
Number of letters in database: 999,999,932
Number of sequences in database: 2,987,209
Database: /data/usr2/db/fasta/nr.01
Posted date: May 13, 2011 4:17 AM
Number of letters in database: 999,998,956
Number of sequences in database: 2,896,973
Database: /data/usr2/db/fasta/nr.02
Posted date: May 13, 2011 4:23 AM
Number of letters in database: 999,999,979
Number of sequences in database: 2,907,862
Database: /data/usr2/db/fasta/nr.03
Posted date: May 13, 2011 4:29 AM
Number of letters in database: 999,999,513
Number of sequences in database: 2,932,190
Database: /data/usr2/db/fasta/nr.04
Posted date: May 13, 2011 4:33 AM
Number of letters in database: 792,586,372
Number of sequences in database: 2,260,650
Lambda K H
0.324 0.136 0.411
Lambda K H
0.267 0.0443 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,822,344,186
Number of Sequences: 13984884
Number of extensions: 240447325
Number of successful extensions: 674427
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 674393
Number of HSP's gapped (non-prelim): 38
length of query: 408
length of database: 4,792,584,752
effective HSP length: 141
effective length of query: 267
effective length of database: 2,820,716,108
effective search space: 753131200836
effective search space used: 753131200836
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 83 (36.5 bits)