Query         gi|254780136|ref|YP_003064549.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 125
No_of_seqs    106 out of 1338
Neff          7.1 
Searched_HMMs 13730
Date          Sun May 22 10:02:02 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780136.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1syya_ a.25.1.2 (A:) Ribonucl  99.9 1.5E-27 1.1E-31  185.6  11.0   95    1-96    223-317 (317)
  2 d1mxra_ a.25.1.2 (A:) Ribonucl  99.9 3.6E-27 2.6E-31  183.3   9.5  100    1-100   235-339 (339)
  3 d1jk0a_ a.25.1.2 (A:) Ribonucl  99.9 1.5E-24 1.1E-28  167.3   9.3   89    1-97    245-333 (334)
  4 d3dhza1 a.25.1.2 (A:14-297) Ri  99.9 2.1E-22 1.6E-26  154.2   9.9   98    1-101   186-284 (284)
  5 d1r2fa_ a.25.1.2 (A:) Ribonucl  99.8 7.1E-21 5.2E-25  145.0  11.8   98    1-101   184-282 (283)
  6 d1w68a_ a.25.1.2 (A:) Ribonucl  99.8   9E-21 6.5E-25  144.4  10.0   85    1-93    197-281 (281)
  7 d1jk0b_ a.25.1.2 (B:) Ribonucl  99.8 7.5E-20 5.5E-24  138.7   6.9   79    1-86    207-285 (285)
  8 d2oc5a1 a.25.1.6 (A:20-241) Hy  93.3    0.24 1.8E-05   26.2   7.9   75    1-83    135-210 (222)
  9 d1afra_ a.25.1.2 (A:) delta 9-  45.0     9.4 0.00068   16.6   4.4   23    2-24    209-231 (345)
 10 d1za0a1 a.25.1.2 (A:8-274) Pos  39.2      12 0.00084   16.0   4.6   23    2-24    180-202 (267)
 11 d2inca1 a.25.1.2 (A:2-492) Tol  38.6      12 0.00086   16.0   5.7   78    2-85    228-313 (491)

No 1  
>d1syya_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Chlamydia trachomatis [TaxId: 813]}
Probab=99.95  E-value=1.5e-27  Score=185.58  Aligned_cols=95  Identities=52%  Similarity=0.983  Sum_probs=92.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             94037899999999999996770003112299999999999999999857630876018899999999999999999985
Q gi|254780136|r    1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQI   80 (125)
Q Consensus         1 ~RDE~lH~~~~~~l~~~l~~e~pe~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~Yiky~an~rL~~l   80 (125)
                      .|||++|+.|++.|++.+++|+|+++++++.++|++|+++||++|++|++++|+.|++|||++++++||+|+||+||.+|
T Consensus       223 ~RDE~lH~~f~~~l~~~l~~e~~e~~~~~~~~~i~el~~eav~~E~~~~~~~~~~~~~Gl~~~~l~~Yv~y~an~~L~~L  302 (317)
T d1syya_         223 LRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGLRASMFIDYVQHIADRRLERI  302 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCBTTBCHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf             81188786699999999855059998633599999999999999999999983798789999999999999999999977


Q ss_pred             CCCCCCCCCCCCHHHH
Q ss_conf             9787889878886899
Q gi|254780136|r   81 GLEPLFKYTENPFPWM   96 (125)
Q Consensus        81 Gl~~~f~~~~nPl~W~   96 (125)
                      |++|+|++ +||+|||
T Consensus       303 G~~~~f~~-~NP~~wm  317 (317)
T d1syya_         303 GLKPIYHT-KNPFPWM  317 (317)
T ss_dssp             TCCCSSCC-CCSCTTC
T ss_pred             CCCCCCCC-CCCCCCC
T ss_conf             99999989-9998979


No 2  
>d1mxra_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Escherichia coli [TaxId: 562]}
Probab=99.94  E-value=3.6e-27  Score=183.26  Aligned_cols=100  Identities=28%  Similarity=0.489  Sum_probs=91.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCHHHHHHHHHHHHHH
Q ss_conf             940378999999999999967700----03112299999999999999999857630876-0188999999999999999
Q gi|254780136|r    1 MRDESLHLNFGIDVINQIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLNAPSCEQYMQFIANR   75 (125)
Q Consensus         1 ~RDE~lH~~~~~~l~~~l~~e~pe----~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~-~~Gl~~~~~~~Yiky~an~   75 (125)
                      +|||++|+.|++.++++++++.+.    .++++++++|++++++||++|.+|++++++.| ++|||++++++||+|+||+
T Consensus       235 ~RDE~lH~~~~~~l~~~l~~~~~~~~~~~~~~e~~~~i~~~~~eave~E~~~~~~~~~~~~l~Gl~~~~~~~yi~y~an~  314 (339)
T d1mxra_         235 ARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNI  314 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTTCCBTTBSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             73237777999999999985377166777678999999999999999999999997047981899999999999999999


Q ss_pred             HHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             9998597878898788868999983
Q gi|254780136|r   76 RCHQIGLEPLFKYTENPFPWMSEVI  100 (125)
Q Consensus        76 rL~~lGl~~~f~~~~nPl~W~~~~~  100 (125)
                      ||.+||++|+|++..||+|||+.|+
T Consensus       315 ~L~~lG~~~~f~~~~NP~~w~~~~l  339 (339)
T d1mxra_         315 RMQAVGLDLPFQTRSNPIPWINTWL  339 (339)
T ss_dssp             HHHHTTCCCCSCCCCCSCGGGGGTC
T ss_pred             HHHHCCCCCCCCCCCCCHHHHHHHC
T ss_conf             9997889999999999868898639


No 3  
>d1jk0a_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Baker's yeast (Saccharomyces cerevisiae), Y2 [TaxId: 4932]}
Probab=99.91  E-value=1.5e-24  Score=167.35  Aligned_cols=89  Identities=30%  Similarity=0.521  Sum_probs=82.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             94037899999999999996770003112299999999999999999857630876018899999999999999999985
Q gi|254780136|r    1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQI   80 (125)
Q Consensus         1 ~RDE~lH~~~~~~l~~~l~~e~pe~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~Yiky~an~rL~~l   80 (125)
                      .|||++|+.|++.|++.++.+       ...+.|++++++||++|.+|+++++|.+++|||+++|++||+|+||+||.+|
T Consensus       245 ~RDE~lH~~f~~~l~~~l~~~-------~~~~~i~~i~~eAvelE~~~~~~~~~~~~~Gln~~~~~~YI~y~Anr~L~~L  317 (334)
T d1jk0a_         245 CRDEGLHTDFACLLFAHLKNK-------PDPAIVEKIVTEAVEIEQRYFLDALPVALLGMNADLMNQYVEFVADRLLVAF  317 (334)
T ss_dssp             HHHHHHHHHHHHHHHHTCSSC-------CCHHHHHHHHHHHHHHHHHHHHTTSCGGGGTCCHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHCCC-------CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf             999999999999999985123-------0489999999999999999999857898689899999999999999999977


Q ss_pred             CCCCCCCCCCCCHHHHH
Q ss_conf             97878898788868999
Q gi|254780136|r   81 GLEPLFKYTENPFPWMS   97 (125)
Q Consensus        81 Gl~~~f~~~~nPl~W~~   97 (125)
                      |++|+|++ +||+|||+
T Consensus       318 G~~~~f~~-~NP~~wme  333 (334)
T d1jk0a_         318 GNKKYYKV-ENPFDFME  333 (334)
T ss_dssp             TCCCSSCC-CCCCGGGG
T ss_pred             CCCCCCCC-CCCCCCCC
T ss_conf             99988999-99988646


No 4  
>d3dhza1 a.25.1.2 (A:14-297) Ribonucleotide reductase R2 {Corynebacterium ammoniagenes [TaxId: 1697]}
Probab=99.87  E-value=2.1e-22  Score=154.22  Aligned_cols=98  Identities=19%  Similarity=0.274  Sum_probs=87.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             94037899999999999996770003112299999999999999999857630876018899999999999999999985
Q gi|254780136|r    1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQI   80 (125)
Q Consensus         1 ~RDE~lH~~~~~~l~~~l~~e~pe~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~Yiky~an~rL~~l   80 (125)
                      +|||++|+.|++.+++.++++.|+.+++++++++++++++||++|.+|++++|+.  +|++. ++++||+|+||+||.+|
T Consensus       186 ~RDE~lH~~f~~~l~~~~~~e~~~~~~~e~~~~i~~~~~~ave~E~~~~~~~~~~--~gl~~-~~~~yiky~an~~L~~l  262 (284)
T d3dhza1         186 IRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIYDD--LGWTE-DVKRFLRYNANKALNNL  262 (284)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TTCHH-HHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHH-HHHHHHHHHHHHHHHHC
T ss_conf             9877777789999998750413255567779999999999999999999998742--57499-99999999999999978


Q ss_pred             CCCCCCCCCCC-CHHHHHHHHC
Q ss_conf             97878898788-8689999834
Q gi|254780136|r   81 GLEPLFKYTEN-PFPWMSEVID  101 (125)
Q Consensus        81 Gl~~~f~~~~n-Pl~W~~~~~~  101 (125)
                      |++|+|+..+. .-||+...++
T Consensus       263 G~~~~f~~~~~~~nP~~~~~~~  284 (284)
T d3dhza1         263 GYEGLFPTDETKVSPAILSSLS  284 (284)
T ss_dssp             TCCCSSCGGGCCCCHHHHHHHC
T ss_pred             CCCCCCCCCCCCCCHHHHHCCC
T ss_conf             8999999855778878882249


No 5  
>d1r2fa_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Salmonella typhimurium [TaxId: 90371]}
Probab=99.84  E-value=7.1e-21  Score=144.98  Aligned_cols=98  Identities=17%  Similarity=0.162  Sum_probs=86.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             94037899999999999996770003112299999999999999999857630876018899999999999999999985
Q gi|254780136|r    1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQI   80 (125)
Q Consensus         1 ~RDE~lH~~~~~~l~~~l~~e~pe~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~Yiky~an~rL~~l   80 (125)
                      +|||++|+.|++.|+++++.+.|+.+++++++.+++++++||++|.+|++++++.+.   ..+++++||+|+||+||++|
T Consensus       184 ~RDE~lH~~f~~~l~~~~~~e~~~~~~~~~~~~v~~~~~e~v~~E~~~~~~~~~~~~---~~~~~~~yiky~an~~L~~l  260 (283)
T d1r2fa_         184 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRYTEALYAETG---WVNDVKAFLCYNANKALMNL  260 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTS---CHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHC
T ss_conf             998875356899999999873358888668999999999999999999999711678---79999999999999999978


Q ss_pred             CCCCCCCCC-CCCHHHHHHHHC
Q ss_conf             978788987-888689999834
Q gi|254780136|r   81 GLEPLFKYT-ENPFPWMSEVID  101 (125)
Q Consensus        81 Gl~~~f~~~-~nPl~W~~~~~~  101 (125)
                      |++|+|+.. .++-||+..+++
T Consensus       261 G~~~~f~~~~~~~NP~~~~~l~  282 (283)
T d1r2fa_         261 GYEALFPPEMADVNPAILAALS  282 (283)
T ss_dssp             TCCCCSCTTTSCCCHHHHHHHC
T ss_pred             CCCCCCCCCCCCCCCCHHCCCC
T ss_conf             8998999877899913541579


No 6  
>d1w68a_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83  E-value=9e-21  Score=144.36  Aligned_cols=85  Identities=29%  Similarity=0.615  Sum_probs=78.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             94037899999999999996770003112299999999999999999857630876018899999999999999999985
Q gi|254780136|r    1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQI   80 (125)
Q Consensus         1 ~RDE~lH~~~~~~l~~~l~~e~pe~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~Yiky~an~rL~~l   80 (125)
                      .|||++|+.+++.++++++.+       ..++.+++++++||++|.+|++++++.+++|||++++++||+|+||+||++|
T Consensus       197 ~rDE~~H~~~~~~l~~~l~~e-------~~~~~v~~~~~~av~lE~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~rL~~l  269 (281)
T d1w68a_         197 SRDEGLHCDFACLMFKHLVHK-------PAEQRVREIITNAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLEL  269 (281)
T ss_dssp             HHHHHHHHHHHHHHHHTCSSC-------CCHHHHHHHHHHHHHHHHHHHHTTSCGGGGTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCCC-------CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf             876788888999998750122-------0389999999999999999999857788689899999999999999999977


Q ss_pred             CCCCCCCCCCCCH
Q ss_conf             9787889878886
Q gi|254780136|r   81 GLEPLFKYTENPF   93 (125)
Q Consensus        81 Gl~~~f~~~~nPl   93 (125)
                      |++|+|++ +||+
T Consensus       270 G~~~~f~~-~NPf  281 (281)
T d1w68a_         270 GFNKIFRV-ENPF  281 (281)
T ss_dssp             TSCCSSCC-CCCC
T ss_pred             CCCCCCCC-CCCC
T ss_conf             89998999-9958


No 7  
>d1jk0b_ a.25.1.2 (B:) Ribonucleotide reductase R2 {Baker's yeast (Saccharomyces cerevisiae), Y4 [TaxId: 4932]}
Probab=99.79  E-value=7.5e-20  Score=138.73  Aligned_cols=79  Identities=20%  Similarity=0.366  Sum_probs=73.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             94037899999999999996770003112299999999999999999857630876018899999999999999999985
Q gi|254780136|r    1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQI   80 (125)
Q Consensus         1 ~RDE~lH~~~~~~l~~~l~~e~pe~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~Yiky~an~rL~~l   80 (125)
                      +|||++|+.|++.+++.++.       +..++.|++++++||++|.+|++++++.+++|||++++++||+|+||+||.+|
T Consensus       207 ~RDE~lH~~f~~~l~~~l~~-------~~~~~~i~~l~~eAv~lE~~~~~~~~~~~~~Gl~~~~~~~Yi~y~an~~L~~l  279 (285)
T d1jk0b_         207 CRDRGAYTDFSCLLFAHLRT-------KPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGF  279 (285)
T ss_dssp             HHHHHHHHHHHHHHHHTCSS-------CCCHHHHHHHHHHHHHHHHHHHTTSCC-----------CTHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf             99999999899899998752-------45499999999999999999999974787689799999999999999999987


Q ss_pred             CCCCCC
Q ss_conf             978788
Q gi|254780136|r   81 GLEPLF   86 (125)
Q Consensus        81 Gl~~~f   86 (125)
                      |++|+|
T Consensus       280 G~~~~y  285 (285)
T d1jk0b_         280 GNEKYY  285 (285)
T ss_dssp             TCCCCC
T ss_pred             CCCCCC
T ss_conf             699999


No 8  
>d2oc5a1 a.25.1.6 (A:20-241) Hypothetical protein PMT1231 {Prochlorococcus marinus [TaxId: 1219]}
Probab=93.32  E-value=0.24  Score=26.22  Aligned_cols=75  Identities=13%  Similarity=0.158  Sum_probs=44.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             9403789999999999999677000311229999999999999999985763087-601889999999999999999998
Q gi|254780136|r    1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVGLNAPSCEQYMQFIANRRCHQ   79 (125)
Q Consensus         1 ~RDE~lH~~~~~~l~~~l~~e~pe~~~~~~~~~i~~~~~eave~E~~~~~~~~~~-~~~Gl~~~~~~~Yiky~an~rL~~   79 (125)
                      |+||.+|+.||..-++.-.        +.+++++.+.-++..-+-..-.+.+-++ .++|+.++.+.+=.--.-...|..
T Consensus       135 VkDEY~HLN~Ge~WLk~~f--------~~~k~el~~AN~~nLPlv~~ML~qV~~Da~vL~Meke~lvedFmi~Y~eAL~~  206 (222)
T d2oc5a1         135 VKDEYTHLNYGEAWLKANL--------ESCREELLEANRENLPLIRRMLDQVAGDAAVLQMDKEDLIEDFLIAYQESLTE  206 (222)
T ss_dssp             HHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf             7447776015899999999--------99999999988861639999999999789997688999999999999999997


Q ss_pred             CCCC
Q ss_conf             5978
Q gi|254780136|r   80 IGLE   83 (125)
Q Consensus        80 lGl~   83 (125)
                      ||+.
T Consensus       207 IGf~  210 (222)
T d2oc5a1         207 IGFN  210 (222)
T ss_dssp             HTCC
T ss_pred             CCCC
T ss_conf             5975


No 9  
>d1afra_ a.25.1.2 (A:) delta 9-stearoyl-acyl carrier protein desaturase {Castor bean (Ricinus communis) [TaxId: 3988]}
Probab=44.97  E-value=9.4  Score=16.58  Aligned_cols=23  Identities=17%  Similarity=0.231  Sum_probs=20.4

Q ss_pred             CHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             40378999999999999967700
Q gi|254780136|r    2 RDESLHLNFGIDVINQIKIENPH   24 (125)
Q Consensus         2 RDE~lH~~~~~~l~~~l~~e~pe   24 (125)
                      +||..|..|+.++++.+.+-+|+
T Consensus       209 ~DE~rH~~fY~~~v~~~Le~dPd  231 (345)
T d1afra_         209 ADEKRHETAYTKIVEKLFEIDPD  231 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             78889999999999999866953


No 10 
>d1za0a1 a.25.1.2 (A:8-274) Possible acyl-[acyl-carrier protein] desaturase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=39.20  E-value=12  Score=16.04  Aligned_cols=23  Identities=22%  Similarity=0.205  Sum_probs=20.3

Q ss_pred             CHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             40378999999999999967700
Q gi|254780136|r    2 RDESLHLNFGIDVINQIKIENPH   24 (125)
Q Consensus         2 RDE~lH~~~~~~l~~~l~~e~pe   24 (125)
                      +||..|..|+.++++.+.+-+|.
T Consensus       180 ~DE~rH~~fy~~~v~~~le~dpd  202 (267)
T d1za0a1         180 RDEVRHEEFFANLVTHCLDYTRD  202 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCH
T ss_conf             88999999999999999875928


No 11 
>d2inca1 a.25.1.2 (A:2-492) Toluene, o-xylene monooxygenase oxygenase subunit TouA {Pseudomonas stutzeri [TaxId: 316]}
Probab=38.58  E-value=12  Score=15.98  Aligned_cols=78  Identities=18%  Similarity=0.099  Sum_probs=42.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH----HHHHHHCCCCCCCCCH-HHHHHHHHHHHH--
Q ss_conf             403789999999999999677000311229999999999999999----9857630876018899-999999999999--
Q gi|254780136|r    2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEI----AYAHETMPKGFVGLNA-PSCEQYMQFIAN--   74 (125)
Q Consensus         2 RDE~lH~~~~~~l~~~l~~e~pe~~~~~~~~~i~~~~~eave~E~----~~~~~~~~~~~~Gl~~-~~~~~Yiky~an--   74 (125)
                      +||+-|+..+..+++.+.++.+   .+..+..|...+=.+-.+=.    -..+|..+..---.+- +.+.   ++++.  
T Consensus       228 sDEaRH~~~~~~~l~~l~e~~~---~~~~Q~~vd~~fWr~~r~~~~l~G~~mdY~~p~~~r~~s~ke~~~---ew~~~~~  301 (491)
T d2inca1         228 TDESRHAQQGGPSLKILVENGK---KDEAQQMVDVAIWRSWKLFSVLTGPIMDYYTPLESRNQSFKEFML---EWIVAQF  301 (491)
T ss_dssp             HHHHHHHTTHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHHHTHHHHHHTSCGGGCCSCHHHHHH---HHTHHHH
T ss_pred             HHHHHHHHCCHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH---HHHHHHH
T ss_conf             5877663234999999996766---799999999998766488998877777650525227889999999---9988999


Q ss_pred             -HHHHHCCCCCC
Q ss_conf             -99998597878
Q gi|254780136|r   75 -RRCHQIGLEPL   85 (125)
Q Consensus        75 -~rL~~lGl~~~   85 (125)
                       ++|..+|++++
T Consensus       302 ~~~L~~yGl~~P  313 (491)
T d2inca1         302 ERQLLDLGLDKP  313 (491)
T ss_dssp             HHHHHHHTCCCC
T ss_pred             HHHHHHHCCCCC
T ss_conf             999999489987


Done!