BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780136|ref|YP_003064549.1| ribonucleotide-diphosphate
reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62]
         (125 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done


Results from round 1


>gi|254780845|ref|YP_003065258.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254780964|ref|YP_003065377.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040522|gb|ACT57318.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040641|gb|ACT57437.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 352

 Score =  268 bits (684), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 125/125 (100%), Positives = 125/125 (100%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL
Sbjct: 228 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 287

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA
Sbjct: 288 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 347

Query: 121 ELKWD 125
           ELKWD
Sbjct: 348 ELKWD 352


>gi|254780136|ref|YP_003064549.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254781006|ref|YP_003065419.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254039813|gb|ACT56609.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040683|gb|ACT57479.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 125

 Score =  265 bits (677), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 125/125 (100%), Positives = 125/125 (100%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL
Sbjct: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA
Sbjct: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120

Query: 121 ELKWD 125
           ELKWD
Sbjct: 121 ELKWD 125


>gi|315122301|ref|YP_004062790.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313495703|gb|ADR52302.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 372

 Score =  209 bits (531), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 94/125 (75%), Positives = 109/125 (87%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDES+HLNFGID+INQIKIENPHLWT++FQQ+ R ML EA LLE+AY  +TMPK F+G+
Sbjct: 248 MRDESVHLNFGIDMINQIKIENPHLWTEDFQQEVRKMLQEAALLEVAYGKDTMPKPFLGI 307

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE+YM FI NRRC QIGL+P+F+ TENPFPWMSEVIDL+KEKNFFETRVTEYQ+G 
Sbjct: 308 NANLCEKYMYFITNRRCTQIGLDPVFEKTENPFPWMSEVIDLQKEKNFFETRVTEYQKGT 367

Query: 121 ELKWD 125
            L WD
Sbjct: 368 SLDWD 372


>gi|209885874|ref|YP_002289731.1| ribonucleoside-diphosphate reductase, beta subunit [Oligotropha
           carboxidovorans OM5]
 gi|209874070|gb|ACI93866.1| ribonucleoside-diphosphate reductase, beta subunit [Oligotropha
           carboxidovorans OM5]
          Length = 377

 Score =  206 bits (523), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 92/125 (73%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWTK FQ + R M+ EA  LE AY  +TMP+GF+GL
Sbjct: 253 LRDESIHLNFGIDVINQIKLENPHLWTKAFQDEVRGMISEAAGLEAAYGRDTMPRGFLGL 312

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM FIANRRC QIGL P+F  TENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 313 NAALCEQYMHFIANRRCAQIGLAPVFAETENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 372

Query: 121 ELKWD 125
            L WD
Sbjct: 373 ALSWD 377


>gi|256377255|ref|YP_003100915.1| ribonucleoside-diphosphate reductase [Actinosynnema mirum DSM
           43827]
 gi|255921558|gb|ACU37069.1| Ribonucleoside-diphosphate reductase [Actinosynnema mirum DSM
           43827]
          Length = 358

 Score =  202 bits (514), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 91/125 (72%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID INQIKIENPHLW + FQ + RTML EA  LEIAY  +TMP G +GL
Sbjct: 234 LRDESIHLNFGIDAINQIKIENPHLWGEAFQAEVRTMLAEACELEIAYGRDTMPNGLLGL 293

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM+FI NRRC Q+GLEP+F  TENPFPWMSE +DLKKEKNFFETRVTEY  G 
Sbjct: 294 NAELCEQYMRFITNRRCAQLGLEPVFAATENPFPWMSEAVDLKKEKNFFETRVTEYASGG 353

Query: 121 ELKWD 125
            L WD
Sbjct: 354 TLDWD 358


>gi|134097869|ref|YP_001103530.1| ribonucleotide-diphosphate reductase subunit beta
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291007412|ref|ZP_06565385.1| ribonucleotide-diphosphate reductase subunit beta
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133910492|emb|CAM00605.1| ribonucleoside-diphosphate reductase, beta subunit
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 360

 Score =  201 bits (512), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 90/125 (72%), Positives = 103/125 (82%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID INQIKIENPHLWT EFQ++ RTML EA  LE+AY  +TMP+G +GL
Sbjct: 236 LRDESIHLNFGIDCINQIKIENPHLWTPEFQEEVRTMLTEACELEVAYGRDTMPRGILGL 295

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE+YM+FI NRRC Q+GLEP+F  T NPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 296 NAGLCEEYMRFITNRRCAQLGLEPVFPETANPFPWMSEAMDLKKEKNFFETRVIEYQSGG 355

Query: 121 ELKWD 125
            L WD
Sbjct: 356 ALDWD 360


>gi|226227154|ref|YP_002761260.1| ribonucleoside-diphosphate reductase beta subunit [Gemmatimonas
           aurantiaca T-27]
 gi|226090345|dbj|BAH38790.1| ribonucleoside-diphosphate reductase beta subunit [Gemmatimonas
           aurantiaca T-27]
          Length = 371

 Score =  201 bits (511), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 89/125 (71%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLW+  FQ++ R ML EA  LE+AY  +TMP+GF+GL
Sbjct: 247 LRDESIHLNFGIDVINQIKVENPHLWSAAFQEEVRQMLAEACELEVAYGRDTMPRGFLGL 306

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE YM FI NRRC Q+GL P+F  T+NPFPWMSE IDLKKEKNFFETRV EYQ G 
Sbjct: 307 NAALCETYMHFITNRRCAQLGLAPVFPETDNPFPWMSEAIDLKKEKNFFETRVIEYQNGG 366

Query: 121 ELKWD 125
            LKWD
Sbjct: 367 ALKWD 371


>gi|110635036|ref|YP_675244.1| ribonucleotide-diphosphate reductase subunit beta [Mesorhizobium
           sp. BNC1]
 gi|110286020|gb|ABG64079.1| ribonucleotide reductase [Chelativorans sp. BNC1]
          Length = 369

 Score =  200 bits (509), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 91/125 (72%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK ENPHLWT EFQ++ R ML +A  LE AY  +TMP+GF+GL
Sbjct: 245 LRDESIHLNFGIDVINQIKHENPHLWTPEFQEELRRMLKDAAELEAAYGRDTMPRGFLGL 304

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM FIANRRC Q+GL P+F  TENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 305 NAGQCEQYMHFIANRRCAQLGLPPVFPETENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 364

Query: 121 ELKWD 125
            L WD
Sbjct: 365 ALSWD 369


>gi|72163401|ref|YP_291058.1| ribonucleotide-diphosphate reductase subunit beta [Thermobifida
           fusca YX]
 gi|71917133|gb|AAZ57035.1| ribonucleoside-diphosphate reductase [Thermobifida fusca YX]
          Length = 354

 Score =  199 bits (507), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 91/125 (72%), Positives = 104/125 (83%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLWT+EFQ + RTML EA  LE AY  ETMP+G +GL
Sbjct: 230 LRDESIHLNFGIDVINQIKIENPHLWTEEFQDEVRTMLIEACELEAAYGRETMPRGILGL 289

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM+FI +RR  Q+GL P+F  TENPFPWMSE++DLKKEKNFFETRV EYQ G+
Sbjct: 290 NAKLCEQYMRFITDRRAEQLGLAPIFGETENPFPWMSEMMDLKKEKNFFETRVIEYQTGS 349

Query: 121 ELKWD 125
            L WD
Sbjct: 350 GLSWD 354


>gi|92119123|ref|YP_578852.1| ribonucleotide-diphosphate reductase subunit beta [Nitrobacter
           hamburgensis X14]
 gi|91802017|gb|ABE64392.1| Ribonucleoside-diphosphate reductase [Nitrobacter hamburgensis X14]
          Length = 416

 Score =  199 bits (507), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 88/125 (70%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW+K FQ++ R ML  A  LE AY  +TMP+GF+GL
Sbjct: 292 LRDESIHLNFGIDVINQIKIENPHLWSKPFQEEVRAMLKNAAELEAAYGRDTMPRGFLGL 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM  IANRRC Q+GL P+F   +NPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAALCEQYMHVIANRRCAQLGLAPVFAEADNPFPWMSEAMDLKKEKNFFETRVIEYQNGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALAWD 416


>gi|85714830|ref|ZP_01045816.1| ribonucleotide reductase [Nitrobacter sp. Nb-311A]
 gi|85698316|gb|EAQ36187.1| ribonucleotide reductase [Nitrobacter sp. Nb-311A]
          Length = 389

 Score =  199 bits (505), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 89/125 (71%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLWTK FQ + R ML  A  LE AY  +TMP+GF+GL
Sbjct: 265 LRDESIHLNFGIDVINQIKIENPHLWTKTFQDEVRAMLKNAAELEAAYGRDTMPRGFLGL 324

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE YM  IANRRC Q+GL P+F  T+NPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 325 NAALCETYMHVIANRRCAQLGLAPVFAETDNPFPWMSEAMDLKKEKNFFETRVIEYQNGG 384

Query: 121 ELKWD 125
            L WD
Sbjct: 385 ALAWD 389


>gi|299134880|ref|ZP_07028072.1| Ribonucleoside-diphosphate reductase [Afipia sp. 1NLS2]
 gi|298590690|gb|EFI50893.1| Ribonucleoside-diphosphate reductase [Afipia sp. 1NLS2]
          Length = 373

 Score =  198 bits (504), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 89/125 (71%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+EN HLWTK FQ+  R M+ +A  LE AY  +TMP+GF+GL
Sbjct: 249 LRDESIHLNFGIDVINQIKLENQHLWTKAFQEDVRGMIRDAAELEAAYGRDTMPRGFLGL 308

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM FIANRRC QIGL P+F  TENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 309 NAALCEQYMHFIANRRCAQIGLTPVFPETENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 368

Query: 121 ELKWD 125
            L W+
Sbjct: 369 ALSWE 373


>gi|90425007|ref|YP_533377.1| ribonucleotide-diphosphate reductase subunit beta [Rhodopseudomonas
           palustris BisB18]
 gi|90107021|gb|ABD89058.1| Ribonucleoside-diphosphate reductase [Rhodopseudomonas palustris
           BisB18]
          Length = 386

 Score =  198 bits (503), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 89/125 (71%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENP LWT  FQ++ R ML EA  LE AY+ +TMP+GF+GL
Sbjct: 262 LRDESIHLNFGIDVINQIKIENPKLWTAGFQEELRGMLQEAAELEAAYSRDTMPRGFLGL 321

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM FI NRRC Q+GL P+F   ENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 322 NAALCEQYMHFITNRRCAQLGLAPIFAEVENPFPWMSETMDLKKEKNFFETRVIEYQNGG 381

Query: 121 ELKWD 125
            L WD
Sbjct: 382 ALTWD 386


>gi|324998522|ref|ZP_08119634.1| ribonucleoside-diphosphate reductase beta chain [Pseudonocardia sp.
           P1]
          Length = 358

 Score =  197 bits (501), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 103/125 (82%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID INQIKIENPHLWT+EF  + R MLHEA  LE+AYA +TMP+G +GL
Sbjct: 234 LRDESIHLNFGIDCINQIKIENPHLWTEEFAAEIRAMLHEACELEVAYARDTMPRGMLGL 293

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A SCEQY++FI +RR  QIGL PLF   +NPFPWMSE +DL+KEKNFFETRVTEY+ G 
Sbjct: 294 TAESCEQYLRFITDRRAEQIGLAPLFGQADNPFPWMSEAMDLRKEKNFFETRVTEYRTGG 353

Query: 121 ELKWD 125
            L+WD
Sbjct: 354 SLEWD 358


>gi|115525181|ref|YP_782092.1| ribonucleotide reductase [Rhodopseudomonas palustris BisA53]
 gi|115519128|gb|ABJ07112.1| ribonucleotide reductase [Rhodopseudomonas palustris BisA53]
          Length = 223

 Score =  196 bits (497), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 88/125 (70%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENP LWT  FQ++ R ML EA  LE AY  +TMP+GF GL
Sbjct: 99  LRDESIHLNFGIDIINQIKIENPELWTAGFQEELRGMLREAAELEAAYCRDTMPRGFFGL 158

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CEQYM FI NRRC Q+GL P+F   ENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 159 NAALCEQYMHFITNRRCAQLGLAPIFAEVENPFPWMSETMDLKKEKNFFETRVIEYQNGG 218

Query: 121 ELKWD 125
            L WD
Sbjct: 219 ALTWD 223


>gi|75677068|ref|YP_319489.1| ribonucleotide-diphosphate reductase subunit beta [Nitrobacter
           winogradskyi Nb-255]
 gi|74421938|gb|ABA06137.1| ribonucleotide reductase [Nitrobacter winogradskyi Nb-255]
          Length = 391

 Score =  195 bits (495), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 86/125 (68%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLW+K FQ++ R ML  A  LE AY  +TMP+GF+GL
Sbjct: 267 LRDESIHLNFGIDIINQIKIENPHLWSKPFQEEVRAMLKNAADLEAAYGRDTMPRGFLGL 326

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE YM  IANRRC Q+GL P+F   +NPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 327 NATLCETYMHVIANRRCAQLGLAPVFPDADNPFPWMSEAMDLKKEKNFFETRVIEYQNGG 386

Query: 121 ELKWD 125
            L WD
Sbjct: 387 ALAWD 391


>gi|297563527|ref|YP_003682501.1| ribonucleoside-diphosphate reductase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296847975|gb|ADH69995.1| Ribonucleoside-diphosphate reductase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 360

 Score =  195 bits (495), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 88/125 (70%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW++EFQ + R ML EA  LE+AY  ETMP+G +GL
Sbjct: 236 LRDESIHLNFGIDVINQIKIENPHLWSEEFQAEVRQMLTEACELEVAYGRETMPRGVLGL 295

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE+YM FI +RR  QIGL P+F  TENPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 296 NAELCEKYMHFITDRRAEQIGLAPIFGETENPFPWMSEMMDLQKEKNFFETRVIEYQTGG 355

Query: 121 ELKWD 125
            L WD
Sbjct: 356 GLDWD 360


>gi|261855609|ref|YP_003262892.1| ribonucleoside-diphosphate reductase [Halothiobacillus neapolitanus
           c2]
 gi|261836078|gb|ACX95845.1| Ribonucleoside-diphosphate reductase [Halothiobacillus neapolitanus
           c2]
          Length = 398

 Score =  194 bits (493), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 88/124 (70%), Positives = 100/124 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDES+H+NFGIDVINQIKIENPHLWT++F+ +   ML EA  LEIAYA +TMP G +GL
Sbjct: 275 MRDESIHMNFGIDVINQIKIENPHLWTEDFKAEVTRMLKEAAELEIAYARDTMPHGLLGL 334

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  C +Y+ FIANRRC+QIGL  LF    NPFPWMSEVIDLKKEKNFFETRVT+YQ G 
Sbjct: 335 NAEMCAEYLHFIANRRCNQIGLAELFPGATNPFPWMSEVIDLKKEKNFFETRVTDYQTGG 394

Query: 121 ELKW 124
            L W
Sbjct: 395 ALNW 398


>gi|257055668|ref|YP_003133500.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis
           DSM 43017]
 gi|256585540|gb|ACU96673.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis
           DSM 43017]
          Length = 349

 Score =  194 bits (492), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 103/125 (82%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFG+D INQIK ENPHLWT EFQQ+ R ML EA  LE+AYAH+TMP+  +GL
Sbjct: 225 LRDESIHLNFGVDCINQIKAENPHLWTPEFQQQVRDMLVEACELEVAYAHDTMPRPMLGL 284

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A  CEQYM FI +RR  Q+GL+P+F   ENPFPWMSEVIDL+KEKNFFETRVT+Y+ GA
Sbjct: 285 SAELCEQYMHFITDRRAAQLGLDPVFGERENPFPWMSEVIDLRKEKNFFETRVTDYRSGA 344

Query: 121 ELKWD 125
            L WD
Sbjct: 345 ALAWD 349


>gi|300784783|ref|YP_003765074.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis
           mediterranei U32]
 gi|299794297|gb|ADJ44672.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis
           mediterranei U32]
          Length = 357

 Score =  194 bits (492), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID INQIKIENPHLWT+EFQ + R ML EA  LE+ YA +TMP+G +GL
Sbjct: 233 LRDESIHLNFGIDCINQIKIENPHLWTEEFQAEVRGMLKEACELEVKYARDTMPRGMLGL 292

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A  CEQYM F+ +RR  QIGL P+F  TENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 293 SAQLCEQYMHFVTDRRAQQIGLAPIFGETENPFPWMSEAMDLKKEKNFFETRVIEYQSGG 352

Query: 121 ELKWD 125
            L WD
Sbjct: 353 ALDWD 357


>gi|302525965|ref|ZP_07278307.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. AA4]
 gi|302434860|gb|EFL06676.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. AA4]
          Length = 357

 Score =  191 bits (485), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 86/125 (68%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID INQIKIENPHLWT+EFQ + R ML EA  LE+ YA +TMP+G +GL
Sbjct: 233 LRDESIHLNFGIDCINQIKIENPHLWTEEFQAEVRGMLQEACELEVKYARDTMPRGMLGL 292

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A  CEQYM FI +RR  QIGL P++   ENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 293 SADLCEQYMHFITDRRAQQIGLPPIYGENENPFPWMSEAMDLKKEKNFFETRVIEYQSGG 352

Query: 121 ELKWD 125
            L WD
Sbjct: 353 ALDWD 357


>gi|300113307|ref|YP_003759882.1| ribonucleoside-diphosphate reductase [Nitrosococcus watsonii C-113]
 gi|299539244|gb|ADJ27561.1| Ribonucleoside-diphosphate reductase [Nitrosococcus watsonii C-113]
          Length = 412

 Score =  191 bits (484), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 85/125 (68%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDES+H+NFGIDVINQIK+ENPHLW+  F+Q++  M+ EA  LE  YAH+TMP+G +GL
Sbjct: 288 MRDESMHMNFGIDVINQIKLENPHLWSDSFKQETLRMIQEAVSLETQYAHDTMPRGVLGL 347

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  E+Y++FIANRRC QIGL   +    NPFPWMSEV+DLKKEKNFFETRVTEYQ G 
Sbjct: 348 NAPMFEEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 407

Query: 121 ELKWD 125
            L WD
Sbjct: 408 ALSWD 412


>gi|292490774|ref|YP_003526213.1| ribonucleoside-diphosphate reductase [Nitrosococcus halophilus Nc4]
 gi|291579369|gb|ADE13826.1| Ribonucleoside-diphosphate reductase [Nitrosococcus halophilus Nc4]
          Length = 415

 Score =  191 bits (484), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 85/125 (68%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDES+H+NFGIDVINQIKIENPHLWT  F+Q++  M+ EA  LE  YA++TMP+G +GL
Sbjct: 291 MRDESMHMNFGIDVINQIKIENPHLWTDSFKQETIQMIREAVSLETQYAYDTMPRGVLGL 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y++FIANRRC QIGL   +    NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 351 NAPMFDEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEILDLKKEKNFFETRVTEYQTGG 410

Query: 121 ELKWD 125
            LKWD
Sbjct: 411 ALKWD 415


>gi|77165986|ref|YP_344511.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosococcus
           oceani ATCC 19707]
 gi|254436303|ref|ZP_05049809.1| ribonucleoside-diphosphate reductase, beta subunit [Nitrosococcus
           oceani AFC27]
 gi|76884300|gb|ABA58981.1| Ribonucleoside-diphosphate reductase [Nitrosococcus oceani ATCC
           19707]
 gi|207087993|gb|EDZ65266.1| ribonucleoside-diphosphate reductase, beta subunit [Nitrosococcus
           oceani AFC27]
          Length = 412

 Score =  191 bits (484), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 85/125 (68%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDES+H+NFGIDVINQIK+ENPHLW+  F+Q++  M+ EA  LE  YAH+TMP+G +GL
Sbjct: 288 MRDESMHMNFGIDVINQIKLENPHLWSDSFKQETLRMIQEAVSLETQYAHDTMPRGVLGL 347

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  E+Y++FIANRRC QIGL   +    NPFPWMSEV+DLKKEKNFFETRVTEYQ G 
Sbjct: 348 NAPMFEEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 407

Query: 121 ELKWD 125
            L WD
Sbjct: 408 ALSWD 412


>gi|192291019|ref|YP_001991624.1| ribonucleotide-diphosphate reductase subunit beta [Rhodopseudomonas
           palustris TIE-1]
 gi|192284768|gb|ACF01149.1| Ribonucleoside-diphosphate reductase [Rhodopseudomonas palustris
           TIE-1]
          Length = 373

 Score =  190 bits (482), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 84/125 (67%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+EN  +WT  FQ   R M+H+A  LE AY  +TMP G +GL
Sbjct: 249 LRDESIHLNFGIDVINQIKLENAAVWTASFQDDIRGMIHDAAELEAAYGRDTMPHGLLGL 308

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE YM FIANRRC Q+GL P+F  T+NPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 309 NAALCESYMHFIANRRCVQLGLRPVFAETDNPFPWMSETMDLKKEKNFFETRVIEYQNGG 368

Query: 121 ELKWD 125
            L WD
Sbjct: 369 ALDWD 373


>gi|220935777|ref|YP_002514676.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219997087|gb|ACL73689.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 408

 Score =  188 bits (478), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIK+ENPHLWT  F+++ RTM+ +A  LE  YA +TMP+G +G+
Sbjct: 284 LRDESMHMNFGIDVINQIKVENPHLWTAAFKEEMRTMIRDAVELEAQYARDTMPRGVLGM 343

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRRC QIGL  ++   ENPFPWMSEV+DLKKEKNFFETRVTEYQ G 
Sbjct: 344 NAAMFEEYLHFIANRRCAQIGLAEIYPGAENPFPWMSEVLDLKKEKNFFETRVTEYQTGG 403

Query: 121 ELKWD 125
            L WD
Sbjct: 404 ALSWD 408


>gi|300022335|ref|YP_003754946.1| ribonucleoside-diphosphate reductase [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524156|gb|ADJ22625.1| Ribonucleoside-diphosphate reductase [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 374

 Score =  187 bits (476), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 85/125 (68%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK EN HLW+K FQ + R ML +A  LE AY  +TMP G +GL
Sbjct: 250 LRDESIHLNFGIDVINQIKAENAHLWSKAFQDEVRGMLRDAAQLEAAYGRDTMPTGLLGL 309

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N    EQYM+FIANRRC Q+GL P+FK  ENPFPWMSE +DLKKEKNFFETRV EYQ G 
Sbjct: 310 NPGLTEQYMEFIANRRCAQLGLTPVFKDRENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 369

Query: 121 ELKWD 125
            L W+
Sbjct: 370 ALSWE 374


>gi|114321252|ref|YP_742935.1| ribonucleotide-diphosphate reductase subunit beta [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114227646|gb|ABI57445.1| Ribonucleoside-diphosphate reductase [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 354

 Score =  187 bits (475), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQI+ ENP LWT +F+Q+  TML EA  LE+AYA +TMP+G +GL
Sbjct: 230 LRDESIHLNFGIDVINQIRHENPELWTNDFEQEVLTMLREAVELEVAYARDTMPRGMLGL 289

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA  CE+YM FI NRRC Q+GL+ L+    NPFPWMSEV+DL+KEKNFFETRVT+Y+ G 
Sbjct: 290 NADMCEEYMHFITNRRCAQLGLKELYPGATNPFPWMSEVMDLQKEKNFFETRVTDYRTGG 349

Query: 121 ELKWD 125
            L+WD
Sbjct: 350 ALQWD 354


>gi|289208615|ref|YP_003460681.1| ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. K90mix]
 gi|288944246|gb|ADC71945.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. K90mix]
          Length = 412

 Score =  187 bits (475), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 82/125 (65%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIK+ENPHLWT+EF+ + RT++ +A  LE  YA +TMP+G +G+
Sbjct: 288 LRDESMHMNFGIDVINQIKVENPHLWTEEFKNEMRTLISDAVELEAQYARDTMPRGVLGM 347

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRRC QIGL  ++   +NPFPWMSEV+DLKKEKNFFETRVTEYQ G 
Sbjct: 348 NAQMFEEYLHFIANRRCAQIGLAEMYPGADNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 407

Query: 121 ELKWD 125
            L WD
Sbjct: 408 ALSWD 412


>gi|288941383|ref|YP_003443623.1| Ribonucleoside-diphosphate reductase [Allochromatium vinosum DSM
           180]
 gi|288896755|gb|ADC62591.1| Ribonucleoside-diphosphate reductase [Allochromatium vinosum DSM
           180]
          Length = 458

 Score =  187 bits (474), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 86/125 (68%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+Q+   M+ EA  LE  YAH+TMP+G +GL
Sbjct: 334 LRDESMHMNFGIDVINQIKIENPHLWTPEFRQELVGMIREAVELEARYAHDTMPRGVLGL 393

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y+ FIANRRC QIGL   +    NPFPWMSEV+DLKKEKNFFETRVTEYQ G 
Sbjct: 394 NAQMFEDYLHFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 453

Query: 121 ELKWD 125
            L WD
Sbjct: 454 ALNWD 458


>gi|192360823|ref|YP_001982048.1| ribonucleotide-diphosphate reductase subunit beta [Cellvibrio
           japonicus Ueda107]
 gi|190686988|gb|ACE84666.1| ribonucleoside reductase, beta subunit [Cellvibrio japonicus
           Ueda107]
          Length = 429

 Score =  185 bits (469), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 82/125 (65%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT EFQQ+   M+ E T LEI YA ++MP+G +G+
Sbjct: 305 LRDESMHLNFGIDVINQIKLENPHLWTAEFQQEVLQMILEGTELEIQYARDSMPRGVLGM 364

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRRC Q+GL+  F   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 365 NAAMMEEYLHFIANRRCAQLGLKEQFPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 424

Query: 121 ELKWD 125
            L WD
Sbjct: 425 ALSWD 429


>gi|33593916|ref|NP_881560.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           pertussis Tohama I]
 gi|33598411|ref|NP_886054.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           parapertussis 12822]
 gi|33603351|ref|NP_890911.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           bronchiseptica RB50]
 gi|33563990|emb|CAE43255.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           pertussis Tohama I]
 gi|33574540|emb|CAE39187.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           parapertussis]
 gi|33577475|emb|CAE34740.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           bronchiseptica RB50]
          Length = 398

 Score =  185 bits (469), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT EF+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 274 LRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 333

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRRC QIG+EPLF   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 334 NAPMFKSYLRFIANRRCQQIGIEPLFPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 393

Query: 121 ELKWD 125
            L W+
Sbjct: 394 TLSWE 398


>gi|53804295|ref|YP_114081.1| ribonucleotide-diphosphate reductase subunit beta [Methylococcus
           capsulatus str. Bath]
 gi|53758056|gb|AAU92347.1| ribonucleoside-diphosphate reductase, beta subunit [Methylococcus
           capsulatus str. Bath]
          Length = 403

 Score =  185 bits (469), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDES+H+NFGIDVINQIK+ENPHLWT  F+ +   M+ EA  +E  YA++TMP+G +GL
Sbjct: 279 MRDESMHMNFGIDVINQIKVENPHLWTDGFKVEMVQMIREAVDIETQYAYDTMPRGILGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y+QFIANRRC QIGL   +    NPFPWMSEV+DLKKEKNFFETRVTEYQ G 
Sbjct: 339 NAPMFKEYLQFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 398

Query: 121 ELKWD 125
            L WD
Sbjct: 399 TLSWD 403


>gi|284032753|ref|YP_003382684.1| Ribonucleoside-diphosphate reductase [Kribbella flavida DSM 17836]
 gi|283812046|gb|ADB33885.1| Ribonucleoside-diphosphate reductase [Kribbella flavida DSM 17836]
          Length = 354

 Score =  185 bits (469), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 85/125 (68%), Positives = 94/125 (75%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHLNFGID INQIK+ENPHLWT  FQ + R ML EA  LE+AY   T+P G +GL
Sbjct: 230 LRDESLHLNFGIDCINQIKLENPHLWTPAFQAEVRRMLTEACELEVAYGRATLPNGMLGL 289

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A  CEQYM FI +RR  Q+GL PLF  T NPF WMSEV+DLKKEKNFFETRV EYQ G 
Sbjct: 290 TAELCEQYMHFITDRRAEQLGLAPLFGETRNPFGWMSEVMDLKKEKNFFETRVIEYQSGG 349

Query: 121 ELKWD 125
            L WD
Sbjct: 350 GLSWD 354


>gi|254516739|ref|ZP_05128798.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR5-3]
 gi|219675162|gb|EED31529.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR5-3]
          Length = 441

 Score =  184 bits (468), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT+EF+Q++  M+ E T LEI YA +TMP+G +G+
Sbjct: 317 LRDESMHLNFGIDVINQIKLENPHLWTEEFKQEAIQMILEGTQLEIEYARDTMPRGVLGM 376

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFIANRR  QIGL   F   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 377 NAAMMEEYLQFIANRRLSQIGLPEQFPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 436

Query: 121 ELKWD 125
            L WD
Sbjct: 437 ALSWD 441


>gi|30250346|ref|NP_842416.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosomonas
           europaea ATCC 19718]
 gi|30181141|emb|CAD86334.1| Ribonucleotide reductase [Nitrosomonas europaea ATCC 19718]
          Length = 382

 Score =  184 bits (468), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 82/125 (65%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGIDVINQIK+ENPHLWT+EF+++   ++ +A  LE  YA +TMP+G +GL
Sbjct: 258 LRDESMHCNFGIDVINQIKLENPHLWTREFREEISALMRKAVELEYRYAEDTMPRGVLGL 317

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y++FI NRR HQIGL+PLF    NPFPWMSE+IDLKKEKNFFETRV EYQ G 
Sbjct: 318 NAPMFKEYLRFIINRRSHQIGLDPLFPEAGNPFPWMSEMIDLKKEKNFFETRVIEYQTGG 377

Query: 121 ELKWD 125
            L WD
Sbjct: 378 VLSWD 382


>gi|300703002|ref|YP_003744604.1| ribonucleoside diphosphate reductase 1 subunit beta, ferritin-like
           [Ralstonia solanacearum CFBP2957]
 gi|299070665|emb|CBJ41960.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum CFBP2957]
          Length = 402

 Score =  184 bits (468), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGLEPLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397

Query: 121 ELKWD 125
            L WD
Sbjct: 398 ALSWD 402


>gi|82703584|ref|YP_413150.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosospira
           multiformis ATCC 25196]
 gi|82411649|gb|ABB75758.1| Ribonucleoside-diphosphate reductase [Nitrosospira multiformis ATCC
           25196]
          Length = 408

 Score =  184 bits (467), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGIDV+NQIK+ENPHLWTKEF+ +   ++ +A  LE  YA +TMP+G +GL
Sbjct: 284 LRDESMHCNFGIDVVNQIKMENPHLWTKEFRSEISALMQKAVELEYRYAEDTMPRGVLGL 343

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y+++IANRRC QIGL+ L+    NPFPWMSE+IDLKKEKNFFETRVTEYQ G 
Sbjct: 344 NAPMFKEYLRYIANRRCQQIGLDILYPGASNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 403

Query: 121 ELKWD 125
            L WD
Sbjct: 404 VLNWD 408


>gi|83746810|ref|ZP_00943858.1| Ribonucleoside-diphosphate reductase beta chain [Ralstonia
           solanacearum UW551]
 gi|207721465|ref|YP_002251905.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum MolK2]
 gi|83726579|gb|EAP73709.1| Ribonucleoside-diphosphate reductase beta chain [Ralstonia
           solanacearum UW551]
 gi|206586625|emb|CAQ17211.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum MolK2]
          Length = 402

 Score =  184 bits (467), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGLEPLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397

Query: 121 ELKWD 125
            L WD
Sbjct: 398 ALSWD 402


>gi|330983931|gb|EGH82034.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 388

 Score =  184 bits (467), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT E ++++  M+ + T LEIAYA +TMP+G +G+
Sbjct: 264 LRDESMHLNFGIDMINQIKIENPHLWTDELKREATVMIIQGTQLEIAYARDTMPRGVLGM 323

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFIANRR  QIGL  ++   +NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 324 NAAMMEEYLQFIANRRLTQIGLPEVYAGAKNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 383

Query: 121 ELKWD 125
            L WD
Sbjct: 384 ALSWD 388


>gi|207744360|ref|YP_002260752.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum IPO1609]
 gi|206595765|emb|CAQ62692.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum IPO1609]
          Length = 410

 Score =  184 bits (467), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 286 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 345

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGLEPLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 346 NAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 405

Query: 121 ELKWD 125
            L WD
Sbjct: 406 ALSWD 410


>gi|163854887|ref|YP_001629185.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           petrii DSM 12804]
 gi|163258615|emb|CAP40914.1| ribonucleoside-diphosphate reductase beta chain [Bordetella petrii]
          Length = 396

 Score =  184 bits (466), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT EF+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 272 LRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRGLFQKAVELEYAYAEDTMPRGVLGL 331

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 332 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 391

Query: 121 ELKWD 125
            L W+
Sbjct: 392 TLSWE 396


>gi|114332419|ref|YP_748641.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosomonas
           eutropha C91]
 gi|114309433|gb|ABI60676.1| Ribonucleoside-diphosphate reductase [Nitrosomonas eutropha C91]
          Length = 377

 Score =  184 bits (466), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGIDVINQIK+ENPHLWT+EF+++   ++ +A  LE  YA +TMP+G +GL
Sbjct: 253 LRDESMHCNFGIDVINQIKLENPHLWTREFREEISALMRKAVELEYRYAEDTMPRGVLGL 312

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y++FI NRR HQIGL+PLF    NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 313 NAPMFKEYLRFIINRRSHQIGLDPLFPEAGNPFPWMSEMVDLKKEKNFFETRVIEYQTGG 372

Query: 121 ELKWD 125
            L WD
Sbjct: 373 VLSWD 377


>gi|187479453|ref|YP_787478.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella avium
           197N]
 gi|115424040|emb|CAJ50593.1| ribonucleoside-diphosphate reductase beta chain [Bordetella avium
           197N]
          Length = 394

 Score =  184 bits (466), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT EF+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 270 LRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 329

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 330 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 389

Query: 121 ELKWD 125
            L W+
Sbjct: 390 TLSWE 394


>gi|317402620|gb|EFV83180.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans C54]
          Length = 399

 Score =  183 bits (464), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K+ENPHLWT EF+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 275 LRDESMHCNFGIDLINTVKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 334

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 335 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 394

Query: 121 ELKWD 125
            L W+
Sbjct: 395 TLSWE 399


>gi|307546480|ref|YP_003898959.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
           elongata DSM 2581]
 gi|307218504|emb|CBV43774.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
           elongata DSM 2581]
          Length = 415

 Score =  183 bits (464), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 82/125 (65%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFG+D+INQIKIENPHLWT EFQ +   M+ E T LEIAYA ++MP+G +G+
Sbjct: 291 LRDESMHLNFGVDMINQIKIENPHLWTPEFQDECTQMILEGTELEIAYARDSMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FI NRR  QIGL+  F   +NPFPWMSE+IDL+KEKNFFETRVTEYQ G 
Sbjct: 351 NAAIMEEYLHFICNRRLAQIGLKEQFPGAQNPFPWMSEIIDLRKEKNFFETRVTEYQVGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|311103857|ref|YP_003976710.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans A8]
 gi|310758546|gb|ADP13995.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans A8]
          Length = 399

 Score =  182 bits (463), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K+ENPHLWT EF+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 275 LRDESMHCNFGIDLINTVKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 334

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 335 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 394

Query: 121 ELKWD 125
            L W+
Sbjct: 395 TLSWE 399


>gi|330430727|gb|AEC22061.1| ribonucleoside-diphosphate reductase beta chain [Pusillimonas sp.
           T7-7]
          Length = 387

 Score =  182 bits (463), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT EF+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 263 LRDESMHCNFGIDLINTIKLENPHLWTAEFREELRELFKKAVDLEYAYAEDTMPRGVLGL 322

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FIANRRC QIGLEPLF   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 323 NASMFKSYLRFIANRRCQQIGLEPLFGQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 382

Query: 121 ELKWD 125
            L W+
Sbjct: 383 ALSWE 387


>gi|260220050|emb|CBA27200.1| Ribonucleoside-diphosphate reductase subunit alpha [Curvibacter
            putative symbiont of Hydra magnipapillata]
          Length = 1306

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 78/125 (62%), Positives = 98/125 (78%)

Query: 1    MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
            +RDES+H NFGID+INQ+K+ENPHLWT EF+ + + +  +A  LE  YA +TMP+G +G+
Sbjct: 1182 LRDESMHCNFGIDLINQLKLENPHLWTPEFKAEIKALFEKAVELEYRYAEDTMPRGVLGM 1241

Query: 61   NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            NA   + Y+++IANRR  QIGLEPLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 1242 NASMFKGYLRYIANRRATQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 1301

Query: 121  ELKWD 125
             L WD
Sbjct: 1302 ALSWD 1306


>gi|92112799|ref|YP_572727.1| ribonucleotide-diphosphate reductase subunit beta [Chromohalobacter
           salexigens DSM 3043]
 gi|91795889|gb|ABE58028.1| Ribonucleoside-diphosphate reductase [Chromohalobacter salexigens
           DSM 3043]
          Length = 420

 Score =  182 bits (462), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 82/125 (65%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFG+D+INQIKIENPHLWT EFQ +   M+ E T LEIAYA ++MP+G +G+
Sbjct: 296 LRDESMHLNFGVDMINQIKIENPHLWTPEFQDEVTQMIIEGTELEIAYARDSMPRGVLGM 355

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FI NRR  QIGL+  +   ENPFPWMSE+IDL+KEKNFFETRVTEYQ G 
Sbjct: 356 NAAIMEEYLHFICNRRLAQIGLKEQYPGAENPFPWMSEIIDLRKEKNFFETRVTEYQVGG 415

Query: 121 ELKWD 125
            L WD
Sbjct: 416 ALSWD 420


>gi|226940720|ref|YP_002795794.1| ribonucleotide-diphosphate reductase subunit beta [Laribacter
           hongkongensis HLHK9]
 gi|226715647|gb|ACO74785.1| Ribonucleoside-diphosphate reductase beta chain [Laribacter
           hongkongensis HLHK9]
          Length = 357

 Score =  182 bits (462), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK ENPHLWT EFQ++   +  +A  LE AYA +TMP+G +GL
Sbjct: 233 LRDESMHCNFGIDLINSIKQENPHLWTVEFQEELYGLFRKAIDLEYAYAEDTMPRGVLGL 292

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y+ FIANRR  QIGLEPLF + +NPFPWMSE+IDLKKEKNFFETRVTEYQ G 
Sbjct: 293 NAAMFKEYLDFIANRRMQQIGLEPLFTHVDNPFPWMSEMIDLKKEKNFFETRVTEYQSGG 352

Query: 121 ELKWD 125
            L WD
Sbjct: 353 ALDWD 357


>gi|90022104|ref|YP_527931.1| ribonucleotide-diphosphate reductase subunit beta [Saccharophagus
           degradans 2-40]
 gi|89951704|gb|ABD81719.1| Class Ia ribonucleoside-diphosphate reductase beta subunit
           [Saccharophagus degradans 2-40]
          Length = 423

 Score =  182 bits (461), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT+EFQ +++ M+ E T LEIAYA +TMP+G +G+
Sbjct: 299 LRDESMHLNFGIDVINQIKLENPHLWTEEFQAETKQMILEGTELEIAYARDTMPRGVLGM 358

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR  Q+GL   +   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 359 NAAMMEEYLHFIANRRMAQLGLAEAYPGAKNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 418

Query: 121 ELKWD 125
            L W+
Sbjct: 419 ALSWE 423


>gi|88705571|ref|ZP_01103281.1| ribonucleoside-diphosphate reductase, beta subunit [Congregibacter
           litoralis KT71]
 gi|88700084|gb|EAQ97193.1| ribonucleoside-diphosphate reductase, beta subunit [Congregibacter
           litoralis KT71]
          Length = 469

 Score =  182 bits (461), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/125 (65%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENP LWT+EF+Q++  M+ E T LEI YA +TMP+G +G+
Sbjct: 345 LRDESMHLNFGIDVINQIKLENPQLWTEEFKQEAIQMILEGTQLEIEYARDTMPRGVLGM 404

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFIANRR  QIGL   F   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 405 NAAMMEEYLQFIANRRLSQIGLPEQFPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 464

Query: 121 ELKWD 125
            L WD
Sbjct: 465 ALSWD 469


>gi|302877617|ref|YP_003846181.1| Ribonucleoside-diphosphate reductase [Gallionella capsiferriformans
           ES-2]
 gi|302580406|gb|ADL54417.1| Ribonucleoside-diphosphate reductase [Gallionella capsiferriformans
           ES-2]
          Length = 365

 Score =  181 bits (460), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 102/125 (81%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFG+D+INQIK+ENPHLWT  F+++ R ++ +   LE AYA +TMP+G +GL
Sbjct: 241 LRDESMHLNFGVDLINQIKMENPHLWTAAFREEIRGLMQKGVELEYAYAEDTMPRGILGL 300

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRRC QIG++ L++   NPFPWMSE+IDLKKEKNFFE+RVTEYQ G 
Sbjct: 301 NATMFKEYLRFIANRRCQQIGVDILYQGATNPFPWMSEMIDLKKEKNFFESRVTEYQTGG 360

Query: 121 ELKWD 125
            L WD
Sbjct: 361 TLSWD 365


>gi|325519933|gb|EGC99191.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia sp.
           TJI49]
          Length = 403

 Score =  181 bits (459), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|254282900|ref|ZP_04957868.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR51-B]
 gi|219679103|gb|EED35452.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR51-B]
          Length = 421

 Score =  181 bits (459), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT EFQ++   M+ E T LEI YA +TMP+G +G+
Sbjct: 297 LRDESMHLNFGIDVINQIKLENPHLWTAEFQEEVVQMILEGTQLEIEYARDTMPRGVLGM 356

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFI NRR +Q+GL   +   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 357 NAAMMEEYLQFICNRRLNQLGLSEQYPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 416

Query: 121 ELKWD 125
            L WD
Sbjct: 417 ALTWD 421


>gi|206561765|ref|YP_002232530.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia J2315]
 gi|254246390|ref|ZP_04939711.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           cenocepacia PC184]
 gi|124871166|gb|EAY62882.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           cenocepacia PC184]
 gi|198037807|emb|CAR53751.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           cenocepacia J2315]
          Length = 403

 Score =  181 bits (459), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|119504228|ref|ZP_01626308.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2080]
 gi|119459736|gb|EAW40831.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2080]
          Length = 419

 Score =  181 bits (459), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 82/125 (65%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENP LWT EFQQ++  M+ E T LEIAYA +TMP+G +G+
Sbjct: 295 LRDESMHLNFGIDVINQIKLENPLLWTPEFQQEAIQMILEGTELEIAYARDTMPRGVLGM 354

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFI NRR +Q+GL   F   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 355 NAAMMEEYLQFICNRRLNQVGLPEQFPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 414

Query: 121 ELKWD 125
            L WD
Sbjct: 415 ALTWD 419


>gi|256822964|ref|YP_003146927.1| Ribonucleoside-diphosphate reductase [Kangiella koreensis DSM
           16069]
 gi|256796503|gb|ACV27159.1| Ribonucleoside-diphosphate reductase [Kangiella koreensis DSM
           16069]
          Length = 421

 Score =  181 bits (459), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFG+D+INQIK+ENPHLWT EF+Q+   M+ E T LEI YA +TMP+G +G+
Sbjct: 297 LRDESMHLNFGVDIINQIKLENPHLWTAEFKQEVLQMILEGTQLEIEYARDTMPRGVLGM 356

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFI NRR  Q+GL   FK   NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 357 NAGMMEEYLQFICNRRLAQLGLPEQFKNVSNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 416

Query: 121 ELKWD 125
            L WD
Sbjct: 417 ALSWD 421


>gi|293603286|ref|ZP_06685715.1| ribonucleotide-diphosphate reductase subunit beta subunit
           [Achromobacter piechaudii ATCC 43553]
 gi|292818321|gb|EFF77373.1| ribonucleotide-diphosphate reductase subunit beta subunit
           [Achromobacter piechaudii ATCC 43553]
          Length = 398

 Score =  181 bits (458), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K+ENPHLWT  F+++ R +  +A  LE AYA +TMP+G +GL
Sbjct: 274 LRDESMHCNFGIDLINTVKLENPHLWTPAFREEIRELFRKAVELEYAYAEDTMPRGVLGL 333

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFFETRV EYQ G 
Sbjct: 334 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 393

Query: 121 ELKWD 125
            L W+
Sbjct: 394 TLSWE 398


>gi|291615085|ref|YP_003525242.1| ribonucleoside-diphosphate reductase [Sideroxydans lithotrophicus
           ES-1]
 gi|291585197|gb|ADE12855.1| Ribonucleoside-diphosphate reductase [Sideroxydans lithotrophicus
           ES-1]
          Length = 382

 Score =  181 bits (458), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFG+DVINQIK+ENPHLWT  F+++ R ++ +   LE  YA +TMP+G +GL
Sbjct: 258 LRDESMHLNFGVDVINQIKLENPHLWTPAFREEVRGLIQKGVELEYRYAEDTMPRGVLGL 317

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRRC QIG++ L++   NPFPWM+E+IDLKKEKNFFETRVTEYQ G 
Sbjct: 318 NAGMFKEYLRFIANRRCQQIGVDMLYQGATNPFPWMAEMIDLKKEKNFFETRVTEYQTGG 377

Query: 121 ELKWD 125
            L WD
Sbjct: 378 ALSWD 382


>gi|161525957|ref|YP_001580969.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           multivorans ATCC 17616]
 gi|160343386|gb|ABX16472.1| Ribonucleoside-diphosphate reductase [Burkholderia multivorans ATCC
           17616]
          Length = 396

 Score =  181 bits (458), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 272 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 331

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 332 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 391

Query: 121 ELKWD 125
            L W+
Sbjct: 392 ALSWE 396


>gi|76808925|ref|YP_334881.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 1710b]
 gi|254208116|ref|ZP_04914466.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei JHU]
 gi|76578378|gb|ABA47853.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           pseudomallei 1710b]
 gi|147752010|gb|EDK59077.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei JHU]
          Length = 376

 Score =  181 bits (458), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 252 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 311

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 312 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 371

Query: 121 ELKWD 125
            L W+
Sbjct: 372 ALSWE 376


>gi|189349324|ref|YP_001944952.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           multivorans ATCC 17616]
 gi|221213238|ref|ZP_03586213.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD1]
 gi|189333346|dbj|BAG42416.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           multivorans ATCC 17616]
 gi|221166690|gb|EED99161.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD1]
          Length = 403

 Score =  181 bits (458), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|121598515|ref|YP_991780.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei SAVP1]
 gi|124385654|ref|YP_001027273.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei NCTC 10229]
 gi|126439848|ref|YP_001060484.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 668]
 gi|126451145|ref|YP_001082790.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei NCTC 10247]
 gi|126453692|ref|YP_001067748.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 1106a]
 gi|134280207|ref|ZP_01766918.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 305]
 gi|166998593|ref|ZP_02264451.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei PRL-20]
 gi|167721297|ref|ZP_02404533.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei DM98]
 gi|167740266|ref|ZP_02413040.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 14]
 gi|167817486|ref|ZP_02449166.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 91]
 gi|167847373|ref|ZP_02472881.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei B7210]
 gi|167895962|ref|ZP_02483364.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 7894]
 gi|167904346|ref|ZP_02491551.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei NCTC 13177]
 gi|167912606|ref|ZP_02499697.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 112]
 gi|217420440|ref|ZP_03451945.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 576]
 gi|226196790|ref|ZP_03792369.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|237813879|ref|YP_002898330.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei MSHR346]
 gi|238561262|ref|ZP_00442338.2| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei GB8 horse 4]
 gi|242316188|ref|ZP_04815204.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106b]
 gi|254178822|ref|ZP_04885476.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 10399]
 gi|254199038|ref|ZP_04905453.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei S13]
 gi|254202774|ref|ZP_04909137.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei FMH]
 gi|254259655|ref|ZP_04950709.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1710a]
 gi|254299327|ref|ZP_04966777.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 406e]
 gi|121227325|gb|ABM49843.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei SAVP1]
 gi|124293674|gb|ABN02943.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei NCTC 10229]
 gi|126219341|gb|ABN82847.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 668]
 gi|126227334|gb|ABN90874.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106a]
 gi|126244015|gb|ABO07108.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei NCTC 10247]
 gi|134248214|gb|EBA48297.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 305]
 gi|147747021|gb|EDK54098.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei FMH]
 gi|157808756|gb|EDO85926.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 406e]
 gi|160694736|gb|EDP84744.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 10399]
 gi|169656868|gb|EDS88265.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei S13]
 gi|217395852|gb|EEC35869.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 576]
 gi|225931050|gb|EEH27058.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|237506031|gb|ACQ98349.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei MSHR346]
 gi|238524965|gb|EEP88395.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei GB8 horse 4]
 gi|242139427|gb|EES25829.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106b]
 gi|243065276|gb|EES47462.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei PRL-20]
 gi|254218344|gb|EET07728.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1710a]
          Length = 403

 Score =  180 bits (457), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|83719302|ref|YP_441701.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis E264]
 gi|83653127|gb|ABC37190.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           thailandensis E264]
          Length = 377

 Score =  180 bits (457), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 253 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 312

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 313 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 372

Query: 121 ELKWD 125
            L W+
Sbjct: 373 ALSWE 377


>gi|167825888|ref|ZP_02457359.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 9]
 gi|167924622|ref|ZP_02511713.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei BCC215]
 gi|254180586|ref|ZP_04887184.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1655]
 gi|254190977|ref|ZP_04897483.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pasteur 52237]
 gi|157938651|gb|EDO94321.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pasteur 52237]
 gi|184211125|gb|EDU08168.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1655]
          Length = 372

 Score =  180 bits (457), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 248 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 307

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 308 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 367

Query: 121 ELKWD 125
            L W+
Sbjct: 368 ALSWE 372


>gi|167574685|ref|ZP_02367559.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           oklahomensis C6786]
          Length = 369

 Score =  180 bits (457), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 245 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 304

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 305 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 364

Query: 121 ELKWD 125
            L W+
Sbjct: 365 ALSWE 369


>gi|254784923|ref|YP_003072351.1| ribonucleotide-diphosphate reductase subunit beta [Teredinibacter
           turnerae T7901]
 gi|237687536|gb|ACR14800.1| ribonucleoside-diphosphate reductase [Teredinibacter turnerae
           T7901]
          Length = 453

 Score =  180 bits (457), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 99/124 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT+ FQQ+ + M+ E T LEI YA +TMP+G +G+
Sbjct: 330 LRDESMHLNFGIDVINQIKLENPHLWTESFQQEVKQMVLEGTELEIGYARDTMPRGVLGM 389

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR  Q+GL+  +   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 390 NAAIMEEYLHFIANRRLAQLGLKEAYPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 449

Query: 121 ELKW 124
            L W
Sbjct: 450 ALSW 453


>gi|167564160|ref|ZP_02357076.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           oklahomensis EO147]
          Length = 369

 Score =  180 bits (457), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 245 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 304

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 305 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 364

Query: 121 ELKWD 125
            L W+
Sbjct: 365 ALSWE 369


>gi|295677726|ref|YP_003606250.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1002]
 gi|295437569|gb|ADG16739.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1002]
          Length = 411

 Score =  180 bits (457), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 287 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRAIFQQAVELEYRYAEDTMPRGVLGL 346

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406

Query: 121 ELKWD 125
            L W+
Sbjct: 407 ALSWE 411


>gi|209521089|ref|ZP_03269819.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. H160]
 gi|209498472|gb|EDZ98597.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. H160]
          Length = 411

 Score =  180 bits (456), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 287 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRAIFQQAVELEYRYAEDTMPRGVLGL 346

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406

Query: 121 ELKWD 125
            L W+
Sbjct: 407 ALSWE 411


>gi|115350552|ref|YP_772391.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ambifaria AMMD]
 gi|172059584|ref|YP_001807236.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ambifaria MC40-6]
 gi|115280540|gb|ABI86057.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria AMMD]
 gi|171992101|gb|ACB63020.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           MC40-6]
          Length = 403

 Score =  180 bits (456), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|170699976|ref|ZP_02891003.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           IOP40-10]
 gi|170135124|gb|EDT03425.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           IOP40-10]
          Length = 403

 Score =  180 bits (456), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|73542624|ref|YP_297144.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           eutropha JMP134]
 gi|72120037|gb|AAZ62300.1| Ribonucleoside-diphosphate reductase [Ralstonia eutropha JMP134]
          Length = 394

 Score =  180 bits (456), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 270 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 329

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 330 NAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 389

Query: 121 ELKWD 125
            L WD
Sbjct: 390 ALSWD 394


>gi|325983070|ref|YP_004295472.1| ribonucleoside-diphosphate reductase [Nitrosomonas sp. AL212]
 gi|325532589|gb|ADZ27310.1| Ribonucleoside-diphosphate reductase [Nitrosomonas sp. AL212]
          Length = 381

 Score =  180 bits (456), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGIDVINQIK+ENP LWTK F+++   ++ +A  LE  YA +TMP+G +G+
Sbjct: 257 LRDESMHCNFGIDVINQIKMENPQLWTKAFREEIAALMQKAVALEYRYAEDTMPRGVLGM 316

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y+++IANRRC QIGL+ L+    NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 317 NAPMFKEYLRYIANRRCQQIGLDTLYPNANNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 376

Query: 121 ELKWD 125
            L WD
Sbjct: 377 ALSWD 381


>gi|194290770|ref|YP_002006677.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus
           taiwanensis LMG 19424]
 gi|193224605|emb|CAQ70616.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Cupriavidus taiwanensis LMG 19424]
          Length = 396

 Score =  180 bits (456), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 272 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 331

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 332 NAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 391

Query: 121 ELKWD 125
            L WD
Sbjct: 392 ALSWD 396


>gi|113869188|ref|YP_727677.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           eutropha H16]
 gi|113527964|emb|CAJ94309.1| Ribonucleoside-diphosphate reductase beta subunit [Ralstonia
           eutropha H16]
          Length = 395

 Score =  180 bits (456), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 271 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 330

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 331 NAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 390

Query: 121 ELKWD 125
            L WD
Sbjct: 391 ALSWD 395


>gi|221202418|ref|ZP_03575450.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2M]
 gi|221208122|ref|ZP_03581127.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2]
 gi|221172025|gb|EEE04467.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2]
 gi|221177695|gb|EEE10110.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2M]
          Length = 372

 Score =  180 bits (456), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 248 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 307

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 308 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 367

Query: 121 ELKWD 125
            L W+
Sbjct: 368 ALSWE 372


>gi|171318520|ref|ZP_02907672.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MEX-5]
 gi|171096306|gb|EDT41212.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MEX-5]
          Length = 403

 Score =  180 bits (456), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|53720599|ref|YP_109585.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei K96243]
 gi|53726102|ref|YP_104055.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei ATCC 23344]
 gi|52211013|emb|CAH37001.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           pseudomallei K96243]
 gi|52429525|gb|AAU50118.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 23344]
          Length = 350

 Score =  180 bits (456), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 226 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 285

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 286 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 345

Query: 121 ELKWD 125
            L W+
Sbjct: 346 ALSWE 350


>gi|238026167|ref|YP_002910398.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           glumae BGR1]
 gi|237875361|gb|ACR27694.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           glumae BGR1]
          Length = 407

 Score =  180 bits (456), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 283 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKRAVELEYRYAEDTMPRGVLGL 342

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FIANRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 343 NAAMFKSYLRFIANRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 402

Query: 121 ELKWD 125
            L W+
Sbjct: 403 ALSWE 407


>gi|167580513|ref|ZP_02373387.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis TXDOH]
 gi|167618621|ref|ZP_02387252.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis Bt4]
 gi|257137870|ref|ZP_05586132.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis E264]
          Length = 350

 Score =  180 bits (456), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 226 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 285

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 286 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 345

Query: 121 ELKWD 125
            L W+
Sbjct: 346 ALSWE 350


>gi|254253304|ref|ZP_04946622.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           dolosa AUO158]
 gi|124895913|gb|EAY69793.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           dolosa AUO158]
          Length = 403

 Score =  180 bits (456), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|107021673|ref|YP_620000.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia AU 1054]
 gi|116688619|ref|YP_834242.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia HI2424]
 gi|105891862|gb|ABF75027.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia AU
           1054]
 gi|116646708|gb|ABK07349.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia
           HI2424]
          Length = 382

 Score =  180 bits (456), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 258 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 317

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 318 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 377

Query: 121 ELKWD 125
            L W+
Sbjct: 378 ALSWE 382


>gi|78065156|ref|YP_367925.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia sp.
           383]
 gi|77965901|gb|ABB07281.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. 383]
          Length = 403

 Score =  180 bits (456), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|170731918|ref|YP_001763865.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia MC0-3]
 gi|169815160|gb|ACA89743.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia
           MC0-3]
          Length = 403

 Score =  180 bits (456), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|167837963|ref|ZP_02464822.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis MSMB43]
          Length = 303

 Score =  179 bits (455), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 179 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 238

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 239 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 298

Query: 121 ELKWD 125
            L W+
Sbjct: 299 ALSWE 303


>gi|329893650|ref|ZP_08269784.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC3088]
 gi|328923577|gb|EGG30889.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC3088]
          Length = 432

 Score =  179 bits (455), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT++FQ++   ML E T +EI YA +TMP+G +G+
Sbjct: 308 LRDESMHLNFGIDVINQIKLENPHLWTEDFQKEVIQMLLEGTQIEIEYARDTMPRGVLGM 367

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFI NRR  Q+GL   F   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 368 NAAMMEEYLQFICNRRLAQLGLPEQFPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 427

Query: 121 ELKWD 125
            L WD
Sbjct: 428 ALSWD 432


>gi|94312018|ref|YP_585228.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus
           metallidurans CH34]
 gi|93355870|gb|ABF09959.1| Ribonucleoside-diphosphate reductase beta subunit [Cupriavidus
           metallidurans CH34]
          Length = 395

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 271 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 330

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 331 NAPMFKGYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 390

Query: 121 ELKWD 125
            L WD
Sbjct: 391 ALSWD 395


>gi|297538242|ref|YP_003674011.1| Ribonucleoside-diphosphate reductase [Methylotenera sp. 301]
 gi|297257589|gb|ADI29434.1| Ribonucleoside-diphosphate reductase [Methylotenera sp. 301]
          Length = 376

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGIDVIN IK+ENPHLWT EF+++ +T++ +   LE  YA  TMP+G +GL
Sbjct: 252 LRDESMHCNFGIDVINTIKLENPHLWTAEFREEIKTLMQKGVELEYQYAEATMPRGVLGL 311

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRRC QIGL+ L+    NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 312 NATMFKEYLRFIANRRCTQIGLDVLYPGATNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 371

Query: 121 ELKWD 125
            L WD
Sbjct: 372 ALSWD 376


>gi|320323423|gb|EFW79511.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320327620|gb|EFW83632.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330876273|gb|EGH10422.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 415

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|70731866|ref|YP_261608.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens Pf-5]
 gi|68346165|gb|AAY93771.1| ribonucleoside-diphosphate reductase, beta subunit, putative
           [Pseudomonas fluorescens Pf-5]
          Length = 415

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|134294683|ref|YP_001118418.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           vietnamiensis G4]
 gi|134137840|gb|ABO53583.1| Ribonucleoside-diphosphate reductase [Burkholderia vietnamiensis
           G4]
          Length = 403

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|330811278|ref|YP_004355740.1| Ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379386|gb|AEA70736.1| Ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 415

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|28868867|ref|NP_791486.1| ribonucleoside-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213969520|ref|ZP_03397656.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato T1]
 gi|301385974|ref|ZP_07234392.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato Max13]
 gi|302058701|ref|ZP_07250242.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato K40]
 gi|302134408|ref|ZP_07260398.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28852106|gb|AAO55181.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213925616|gb|EEB59175.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato T1]
 gi|330960626|gb|EGH60886.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. maculicola str. ES4326]
 gi|331016758|gb|EGH96814.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 415

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|77460516|ref|YP_350023.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens Pf0-1]
 gi|77384519|gb|ABA76032.1| ribonucleoside-diphosphate reductase beta chain [Pseudomonas
           fluorescens Pf0-1]
          Length = 416

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEASQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|66046950|ref|YP_236791.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae B728a]
 gi|237798938|ref|ZP_04587399.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|237806191|ref|ZP_04592895.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|63257657|gb|AAY38753.1| Ribonucleoside-diphosphate reductase [Pseudomonas syringae pv.
           syringae B728a]
 gi|330980156|gb|EGH78342.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aptata str. DSM 50252]
 gi|331021792|gb|EGI01849.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331027304|gb|EGI07359.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 415

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|330892405|gb|EGH25066.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 415

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|330880140|gb|EGH14289.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
 gi|330966559|gb|EGH66819.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 415

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|71737432|ref|YP_275887.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|257485935|ref|ZP_05639976.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289628680|ref|ZP_06461634.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289648392|ref|ZP_06479735.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|298487941|ref|ZP_07005980.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|302184861|ref|ZP_07261534.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae 642]
 gi|71557985|gb|AAZ37196.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|298157492|gb|EFH98573.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|330866023|gb|EGH00732.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330896997|gb|EGH28545.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. japonica str. M301072PT]
 gi|330986742|gb|EGH84845.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331010341|gb|EGH90397.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 415

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|167586060|ref|ZP_02378448.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ubonensis Bu]
          Length = 403

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVDLEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398

Query: 121 ELKWD 125
            L W+
Sbjct: 399 ALSWE 403


>gi|17547523|ref|NP_520925.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           solanacearum GMI1000]
 gi|17429827|emb|CAD16511.1| putative transmembrane ribonucleoside reductase (small chain)
           oxidoreductase protein [Ralstonia solanacearum GMI1000]
          Length = 400

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 276 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 335

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   +NPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 336 NAPMFKGYLRFICNRRCQQIGLDALFPNEDNPFPWMSEMIDLKKERNFFETRVIEYQTGG 395

Query: 121 ELKWD 125
            L WD
Sbjct: 396 ALSWD 400


>gi|312960686|ref|ZP_07775192.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
 gi|311285212|gb|EFQ63787.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
          Length = 416

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|299065648|emb|CBJ36820.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum CMR15]
          Length = 398

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 274 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 333

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   +NPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 334 NAPMFKGYLRFICNRRCQQIGLDALFPNEDNPFPWMSEMIDLKKERNFFETRVIEYQTGG 393

Query: 121 ELKWD 125
            L WD
Sbjct: 394 ALSWD 398


>gi|229590245|ref|YP_002872364.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens SBW25]
 gi|229362111|emb|CAY49013.1| putative ribonucleoside-diphosphate reductase beta chain
           [Pseudomonas fluorescens SBW25]
          Length = 416

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|152980709|ref|YP_001354668.1| ribonucleotide-diphosphate reductase subunit beta
           [Janthinobacterium sp. Marseille]
 gi|151280786|gb|ABR89196.1| ribonucleoside-diphosphate reductase beta chain [Janthinobacterium
           sp. Marseille]
          Length = 392

 Score =  179 bits (453), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT +F+++ +T+   A  LE  YA +TMP+G +GL
Sbjct: 268 LRDESMHCNFGIDLINTIKLENPHLWTPQFREEIKTLFLRAVELEYRYAEDTMPRGVLGL 327

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRR  QIGLEP+F+  ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 328 NAPMFKGYLRFIANRRAQQIGLEPMFEQEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 387

Query: 121 ELKWD 125
            L W+
Sbjct: 388 ALNWE 392


>gi|312962626|ref|ZP_07777115.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
 gi|311283001|gb|EFQ61593.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
          Length = 136

 Score =  179 bits (453), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 12  LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 71

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 72  NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 131

Query: 121 ELKWD 125
            L WD
Sbjct: 132 ALSWD 136


>gi|253997287|ref|YP_003049351.1| Ribonucleoside-diphosphate reductase [Methylotenera mobilis JLW8]
 gi|253983966|gb|ACT48824.1| Ribonucleoside-diphosphate reductase [Methylotenera mobilis JLW8]
          Length = 377

 Score =  179 bits (453), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGIDVIN IK+ENPHLWT EF+ + + ++     LE  YA  TMP+G +GL
Sbjct: 253 LRDESMHCNFGIDVINTIKLENPHLWTAEFRDEIKGLIQHGVELEYRYAEATMPRGVLGL 312

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRRC QIGL+ L++   NPFPWMSE+IDLKKEKNFFETRVTEYQ G 
Sbjct: 313 NATMFKEYLRFIANRRCQQIGLDVLYQGATNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 372

Query: 121 ELKWD 125
            L WD
Sbjct: 373 ALSWD 377


>gi|229592166|ref|YP_002874285.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens SBW25]
 gi|229364032|emb|CAY51597.1| ribonucleoside-diphosphate reductase beta chain [Pseudomonas
           fluorescens SBW25]
          Length = 416

 Score =  178 bits (452), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|187930114|ref|YP_001900601.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           pickettii 12J]
 gi|187727004|gb|ACD28169.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12J]
          Length = 402

 Score =  178 bits (451), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397

Query: 121 ELKWD 125
            L W+
Sbjct: 398 ALSWE 402


>gi|331006663|ref|ZP_08329944.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC1989]
 gi|330419531|gb|EGG93916.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC1989]
          Length = 444

 Score =  177 bits (450), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIK+ENPHLWT+EF+ +   M+ E T LEIAYA +TMP+G +G+
Sbjct: 320 LRDESMHLNFGIDIINQIKLENPHLWTEEFKAEVTQMVLEGTELEIAYARDTMPRGVLGM 379

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFI+NRR  Q+GL   +   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 380 NAAMMEEYLQFISNRRLAQLGLTEQYPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 439

Query: 121 ELKWD 125
            L W+
Sbjct: 440 ALTWE 444


>gi|300690381|ref|YP_003751376.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum PSI07]
 gi|299077441|emb|CBJ50067.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum PSI07]
          Length = 402

 Score =  177 bits (450), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397

Query: 121 ELKWD 125
            L W+
Sbjct: 398 ALSWE 402


>gi|241664219|ref|YP_002982579.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           pickettii 12D]
 gi|309783064|ref|ZP_07677783.1| ribonucleoside-diphosphate reductase, beta subunit [Ralstonia sp.
           5_7_47FAA]
 gi|240866246|gb|ACS63907.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
 gi|308918172|gb|EFP63850.1| ribonucleoside-diphosphate reductase, beta subunit [Ralstonia sp.
           5_7_47FAA]
          Length = 402

 Score =  177 bits (450), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397

Query: 121 ELKWD 125
            L W+
Sbjct: 398 ALSWE 402


>gi|300309722|ref|YP_003773814.1| transmembrane ribonucleoside reductase small subunit
           [Herbaspirillum seropedicae SmR1]
 gi|300072507|gb|ADJ61906.1| transmembrane ribonucleoside reductase (small chain) protein
           [Herbaspirillum seropedicae SmR1]
          Length = 388

 Score =  177 bits (450), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K+ENPHLWT EF+++ +++   A  LE  YA +TMP+G +GL
Sbjct: 264 LRDESMHCNFGIDLINTVKMENPHLWTPEFREEIKSLFLRAVELEYRYAEDTMPRGVLGL 323

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRR  QIGL+PLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 324 NAPMFKSYLRFIANRRAQQIGLDPLFAQEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 383

Query: 121 ELKWD 125
            L W+
Sbjct: 384 ALSWE 388


>gi|289677030|ref|ZP_06497920.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae FF5]
          Length = 243

 Score =  177 bits (450), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 119 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 178

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 179 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 238

Query: 121 ELKWD 125
            L WD
Sbjct: 239 ALSWD 243


>gi|110833571|ref|YP_692430.1| ribonucleotide-diphosphate reductase subunit beta [Alcanivorax
           borkumensis SK2]
 gi|110646682|emb|CAL16158.1| ribonucleoside reductase, beta subunit [Alcanivorax borkumensis
           SK2]
          Length = 430

 Score =  177 bits (449), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIK+ENPHLW  + + K+  M+ E T LEI YA +TMP+G +G+
Sbjct: 306 LRDESMHVNFGIDVINQIKLENPHLWDAQMRDKATQMILEGTELEIQYARDTMPRGVLGM 365

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFIANRR  Q+GL   FK   NPFPWMSE++DL+KEKNFFETRVTEYQ G 
Sbjct: 366 NAAMMEEYLQFIANRRLAQLGLPEQFKGVNNPFPWMSEIMDLRKEKNFFETRVTEYQVGG 425

Query: 121 ELKWD 125
            L W+
Sbjct: 426 ALSWE 430


>gi|119713586|gb|ABL97637.1| ribonucleotide-diphosphate reductase beta subunit [uncultured
           marine bacterium EB0_39H12]
          Length = 412

 Score =  177 bits (448), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIK+ENPHLW ++ + ++  M+ E T LEI YA +TMP+G +G+
Sbjct: 288 LRDESMHLNFGIDMINQIKLENPHLWDEQMRHEAAQMILEGTELEIQYARDTMPRGILGM 347

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFIANRR  QIGLE  F+   NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 348 NAGMMEEYLQFIANRRLVQIGLEEEFEGASNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 407

Query: 121 ELKWD 125
            L WD
Sbjct: 408 ALTWD 412


>gi|296160506|ref|ZP_06843322.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. Ch1-1]
 gi|295889255|gb|EFG69057.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. Ch1-1]
          Length = 415

 Score =  177 bits (448), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 291 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 351 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L W+
Sbjct: 411 ALTWE 415


>gi|187925407|ref|YP_001897049.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           phytofirmans PsJN]
 gi|187716601|gb|ACD17825.1| Ribonucleoside-diphosphate reductase [Burkholderia phytofirmans
           PsJN]
          Length = 415

 Score =  177 bits (448), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 291 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 351 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L W+
Sbjct: 411 ALTWE 415


>gi|186477386|ref|YP_001858856.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           phymatum STM815]
 gi|184193845|gb|ACC71810.1| Ribonucleoside-diphosphate reductase [Burkholderia phymatum STM815]
          Length = 407

 Score =  177 bits (448), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 283 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIREIFKHAVDLEYRYAEDTMPRGVLGL 342

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIG++PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 343 NASMFKSYLRFICNRRCQQIGIDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 402

Query: 121 ELKWD 125
            L W+
Sbjct: 403 ALSWE 407


>gi|74317993|ref|YP_315733.1| ribonucleotide-diphosphate reductase subunit beta [Thiobacillus
           denitrificans ATCC 25259]
 gi|74057488|gb|AAZ97928.1| ribonucleoside-diphosphate reductase beta chain [Thiobacillus
           denitrificans ATCC 25259]
          Length = 376

 Score =  177 bits (448), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK ENPHLWT EF+ + RT++ +   LE  YA +TMP+G +GL
Sbjct: 252 LRDESMHCNFGIDLINTIKQENPHLWTSEFKAEIRTLIQKGVELEFRYAEDTMPRGVLGL 311

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N+   ++Y++FI+NRRC QIGL+ +F    NPFPWM+E+IDLKKEKNFFETRVTEYQ G 
Sbjct: 312 NSAQFKEYLRFISNRRCQQIGLDEMFPGVSNPFPWMAEMIDLKKEKNFFETRVTEYQTGG 371

Query: 121 ELKWD 125
            L WD
Sbjct: 372 ALSWD 376


>gi|148546452|ref|YP_001266554.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida F1]
 gi|148510510|gb|ABQ77370.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida F1]
          Length = 415

 Score =  177 bits (448), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|91785256|ref|YP_560462.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           xenovorans LB400]
 gi|91689210|gb|ABE32410.1| Ribonucleoside-diphosphate reductase [Burkholderia xenovorans
           LB400]
          Length = 411

 Score =  177 bits (448), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 287 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 346

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406

Query: 121 ELKWD 125
            L W+
Sbjct: 407 ALTWE 411


>gi|170695324|ref|ZP_02886470.1| Ribonucleoside-diphosphate reductase [Burkholderia graminis C4D1M]
 gi|170139724|gb|EDT07906.1| Ribonucleoside-diphosphate reductase [Burkholderia graminis C4D1M]
          Length = 414

 Score =  177 bits (448), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 290 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 349

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 350 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 409

Query: 121 ELKWD 125
            L W+
Sbjct: 410 ALTWE 414


>gi|330815478|ref|YP_004359183.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           gladioli BSR3]
 gi|327367871|gb|AEA59227.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           gladioli BSR3]
          Length = 407

 Score =  177 bits (448), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA +TMP+G +GL
Sbjct: 283 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKHAVELEYRYAEDTMPRGVLGL 342

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FIANRRC QIGL+ L+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 343 NASMFKSYLRFIANRRCQQIGLDALYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 402

Query: 121 ELKWD 125
            L W+
Sbjct: 403 ALSWE 407


>gi|254483523|ref|ZP_05096750.1| ribonucleoside-diphosphate reductase, beta subunit [marine gamma
           proteobacterium HTCC2148]
 gi|214036244|gb|EEB76924.1| ribonucleoside-diphosphate reductase, beta subunit [marine gamma
           proteobacterium HTCC2148]
          Length = 425

 Score =  177 bits (448), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENP+LWT+ FQQ+   M+ E T +EI YA +TMP+G +G+
Sbjct: 301 LRDESMHLNFGIDVINQIKLENPNLWTETFQQEVIQMILEGTEIEIQYARDTMPRGVLGM 360

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR  Q+GL   F   +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 361 NAAIMEEYLHFIANRRLSQLGLPEQFAGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 420

Query: 121 ELKWD 125
            L WD
Sbjct: 421 ALSWD 425


>gi|307731037|ref|YP_003908261.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1003]
 gi|307585572|gb|ADN58970.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1003]
          Length = 411

 Score =  176 bits (447), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 287 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 346

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406

Query: 121 ELKWD 125
            L W+
Sbjct: 407 ALTWE 411


>gi|146308172|ref|YP_001188637.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina ymp]
 gi|145576373|gb|ABP85905.1| Ribonucleoside-diphosphate reductase [Pseudomonas mendocina ymp]
          Length = 416

 Score =  176 bits (447), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  + + ++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|104780527|ref|YP_607025.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           entomophila L48]
 gi|95109514|emb|CAK14215.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           entomophila L48]
          Length = 415

 Score =  176 bits (447), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|330504346|ref|YP_004381215.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina NK-01]
 gi|328918632|gb|AEB59463.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina NK-01]
          Length = 416

 Score =  176 bits (447), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  + + ++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|325272776|ref|ZP_08139120.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas sp.
           TJI-51]
 gi|324102083|gb|EGB99585.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas sp.
           TJI-51]
          Length = 416

 Score =  176 bits (447), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|170720377|ref|YP_001748065.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida W619]
 gi|169758380|gb|ACA71696.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida W619]
          Length = 416

 Score =  176 bits (447), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|327480258|gb|AEA83568.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           stutzeri DSM 4166]
          Length = 415

 Score =  176 bits (447), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLW  E + ++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDMINQIKIENPHLWNAEMKDEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|134095932|ref|YP_001101007.1| ribonucleotide-diphosphate reductase subunit beta [Herminiimonas
           arsenicoxydans]
 gi|133739835|emb|CAL62886.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Herminiimonas arsenicoxydans]
          Length = 395

 Score =  176 bits (447), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT +F+ + + +   A  LE  YA +TMP+G +GL
Sbjct: 271 LRDESMHCNFGIDLINTIKLENPHLWTPQFRDEIKALFLRAVELEYRYAEDTMPRGVLGL 330

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRR  QIGLEP+F+  ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 331 NAPMFKGYLRFIANRRAQQIGLEPMFEQEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 390

Query: 121 ELKWD 125
            L W+
Sbjct: 391 ALNWE 395


>gi|323527395|ref|YP_004229548.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1001]
 gi|323384397|gb|ADX56488.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1001]
          Length = 414

 Score =  176 bits (447), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +GL
Sbjct: 290 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 349

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 350 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 409

Query: 121 ELKWD 125
            L W+
Sbjct: 410 ALTWE 414


>gi|15596352|ref|NP_249846.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PAO1]
 gi|107100605|ref|ZP_01364523.1| hypothetical protein PaerPA_01001630 [Pseudomonas aeruginosa PACS2]
 gi|116049087|ref|YP_792111.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|152988648|ref|YP_001349579.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PA7]
 gi|218892881|ref|YP_002441750.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa LESB58]
 gi|254239525|ref|ZP_04932847.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa 2192]
 gi|296390475|ref|ZP_06879950.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PAb1]
 gi|313106126|ref|ZP_07792381.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa 39016]
 gi|9947077|gb|AAG04544.1|AE004545_7 NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa PAO1]
 gi|115584308|gb|ABJ10323.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126192903|gb|EAZ56966.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa 2192]
 gi|150963806|gb|ABR85831.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa PA7]
 gi|187939552|gb|ACD38699.1| ribonucleoside reductase small chain [Pseudomonas aeruginosa]
 gi|218773109|emb|CAW28921.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa LESB58]
 gi|310878883|gb|EFQ37477.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa 39016]
          Length = 415

 Score =  176 bits (446), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  + + ++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|329902475|ref|ZP_08273120.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327548767|gb|EGF33404.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 416

 Score =  176 bits (446), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID++N IK+ENPHLWT EF+ + + +   A  LE  YA +TMP+G +GL
Sbjct: 292 LRDESMHCNFGIDLVNTIKMENPHLWTPEFRDEIKALFLTAVELEYRYAEDTMPRGVLGL 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y++FIANRR  QIGLEP+F+  ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 352 NAPMFKGYLRFIANRRAQQIGLEPMFENEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L W+
Sbjct: 412 ALSWE 416


>gi|26987912|ref|NP_743337.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida KT2440]
 gi|167035231|ref|YP_001670462.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida GB-1]
 gi|24982621|gb|AAN66801.1|AE016309_3 ribonucleoside reductase, beta subunit [Pseudomonas putida KT2440]
 gi|166861719|gb|ABZ00127.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida GB-1]
 gi|313497534|gb|ADR58900.1| NrdB [Pseudomonas putida BIRD-1]
          Length = 416

 Score =  176 bits (446), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|262373382|ref|ZP_06066661.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           junii SH205]
 gi|262313407|gb|EEY94492.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           junii SH205]
          Length = 427

 Score =  176 bits (446), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|293609145|ref|ZP_06691448.1| ribonucleoside-diphosphate reductase [Acinetobacter sp. SH024]
 gi|292829718|gb|EFF88080.1| ribonucleoside-diphosphate reductase [Acinetobacter sp. SH024]
          Length = 427

 Score =  176 bits (446), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|146282010|ref|YP_001172163.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           stutzeri A1501]
 gi|145570215|gb|ABP79321.1| ribonucleoside reductase, small chain [Pseudomonas stutzeri A1501]
          Length = 415

 Score =  176 bits (446), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLW  E + ++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDMINQIKIENPHLWDAEMKDEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 351 NASMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410

Query: 121 ELKWD 125
            L WD
Sbjct: 411 ALSWD 415


>gi|325121074|gb|ADY80597.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 370

 Score =  176 bits (445), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 247 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 306

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 307 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 366

Query: 121 ELKW 124
            L W
Sbjct: 367 ALSW 370


>gi|255318309|ref|ZP_05359544.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SK82]
 gi|262379054|ref|ZP_06072210.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SH164]
 gi|255304621|gb|EET83803.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SK82]
 gi|262298511|gb|EEY86424.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SH164]
          Length = 427

 Score =  176 bits (445), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 98/124 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEIIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR +Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NAAMMEEYLKFICNRRLNQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|312795100|ref|YP_004028022.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           rhizoxinica HKI 454]
 gi|312166875|emb|CBW73878.1| Ribonucleoside-diphosphate reductase beta chain (EC 1.17.4.1)
           [Burkholderia rhizoxinica HKI 454]
          Length = 416

 Score =  176 bits (445), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENPHLWT  F+++   +   A  LE  YA +TMP+G +GL
Sbjct: 292 LRDESMHCNFGIDLINQIKLENPHLWTPAFREEICGLFKHAVELEYRYAEDTMPRGVLGL 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FI NRRC QIGLEPLF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 352 NAGMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L W+
Sbjct: 412 ALSWE 416


>gi|260551040|ref|ZP_05825245.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           sp. RUH2624]
 gi|260405988|gb|EEW99475.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           sp. RUH2624]
          Length = 427

 Score =  176 bits (445), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|254429337|ref|ZP_05043044.1| ribonucleoside-diphosphate reductase, beta subunit [Alcanivorax sp.
           DG881]
 gi|196195506|gb|EDX90465.1| ribonucleoside-diphosphate reductase, beta subunit [Alcanivorax sp.
           DG881]
          Length = 355

 Score =  176 bits (445), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIK+ENPHLW  + + K+  M+ E   LEI YA +TMP+G +G+
Sbjct: 231 LRDESMHVNFGIDVINQIKLENPHLWDAQMRDKATQMILEGAELEIQYARDTMPRGVLGM 290

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFIANRR  Q+GL   FK   NPFPWMSE++DL+KEKNFFETRVTEYQ G 
Sbjct: 291 NAAMMEEYLQFIANRRLAQLGLPEQFKGVNNPFPWMSEIMDLRKEKNFFETRVTEYQVGG 350

Query: 121 ELKWD 125
            L W+
Sbjct: 351 ALSWE 355


>gi|169634186|ref|YP_001707922.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii SDF]
 gi|169152978|emb|CAP02026.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii]
          Length = 427

 Score =  175 bits (444), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|126640804|ref|YP_001083788.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii ATCC 17978]
 gi|322506921|gb|ADX02375.1| nrdB [Acinetobacter baumannii 1656-2]
 gi|323516789|gb|ADX91170.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii TCDC-AB0715]
          Length = 361

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 238 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 297

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 298 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 357

Query: 121 ELKW 124
            L W
Sbjct: 358 ALSW 361


>gi|169797064|ref|YP_001714857.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AYE]
 gi|213156529|ref|YP_002318190.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AB0057]
 gi|215484526|ref|YP_002326761.1| ribonucleotide-diphosphate reductase small chain [Acinetobacter
           baumannii AB307-0294]
 gi|239501302|ref|ZP_04660612.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB900]
 gi|260555643|ref|ZP_05827863.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii ATCC 19606]
 gi|294839369|ref|ZP_06784052.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. 6013113]
 gi|294859388|ref|ZP_06797157.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. 6013150]
 gi|301345633|ref|ZP_07226374.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB056]
 gi|301512780|ref|ZP_07238017.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB058]
 gi|301596291|ref|ZP_07241299.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB059]
 gi|169149991|emb|CAM87885.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AYE]
 gi|193076530|gb|ABO11186.2| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           baumannii ATCC 17978]
 gi|213055689|gb|ACJ40591.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AB0057]
 gi|213987168|gb|ACJ57467.1| ribonucleotide-diphosphate reductase small chain [Acinetobacter
           baumannii AB307-0294]
 gi|260410554|gb|EEX03852.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii ATCC 19606]
          Length = 427

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|184157022|ref|YP_001845361.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii ACICU]
 gi|183208616|gb|ACC56014.1| Ribonucleotide reductase, beta subunit [Acinetobacter baumannii
           ACICU]
          Length = 427

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|262280153|ref|ZP_06057938.1| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           calcoaceticus RUH2202]
 gi|262260504|gb|EEY79237.1| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           calcoaceticus RUH2202]
          Length = 427

 Score =  175 bits (443), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 78/124 (62%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLW+ EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWSAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|153208286|ref|ZP_01946665.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii 'MSU Goat Q177']
 gi|165919229|ref|ZP_02219315.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 334]
 gi|212219268|ref|YP_002306055.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii CbuK_Q154]
 gi|120576070|gb|EAX32694.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii 'MSU Goat Q177']
 gi|165917090|gb|EDR35694.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 334]
 gi|212013530|gb|ACJ20910.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           CbuK_Q154]
          Length = 401

 Score =  174 bits (442), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLW K FQ++   M+ E   LE  YA +TMP+G +GL
Sbjct: 276 LRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYAKDTMPRGILGL 335

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+Q+IANRRC QIGL   F   +N FPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 336 NANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFFETRVIEYQAGG 395

Query: 121 ELKWD 125
            LKWD
Sbjct: 396 TLKWD 400


>gi|212212091|ref|YP_002303027.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii CbuG_Q212]
 gi|212010501|gb|ACJ17882.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           CbuG_Q212]
          Length = 401

 Score =  174 bits (442), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLW K FQ++   M+ E   LE  YA +TMP+G +GL
Sbjct: 276 LRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYAKDTMPRGILGL 335

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+Q+IANRRC QIGL   F   +N FPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 336 NANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFFETRVIEYQAGG 395

Query: 121 ELKWD 125
            LKWD
Sbjct: 396 TLKWD 400


>gi|29654845|ref|NP_820537.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii RSA 493]
 gi|154705923|ref|YP_001423853.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii Dugway 5J108-111]
 gi|161831080|ref|YP_001597389.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii RSA 331]
 gi|29542113|gb|AAO91051.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           RSA 493]
 gi|154355209|gb|ABS76671.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           Dugway 5J108-111]
 gi|161762947|gb|ABX78589.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 331]
          Length = 401

 Score =  174 bits (442), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLW K FQ++   M+ E   LE  YA +TMP+G +GL
Sbjct: 276 LRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYAKDTMPRGILGL 335

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+Q+IANRRC QIGL   F   +N FPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 336 NANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFFETRVIEYQAGG 395

Query: 121 ELKWD 125
            LKWD
Sbjct: 396 TLKWD 400


>gi|50083944|ref|YP_045454.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. ADP1]
 gi|49529920|emb|CAG67632.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           sp. ADP1]
          Length = 427

 Score =  174 bits (442), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 78/124 (62%), Positives = 98/124 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGID+INQIKIENPHLWT EFQQ+   M+ E TLLEI YA +TMP+G +G+
Sbjct: 304 LRDESMHVNFGIDMINQIKIENPHLWTAEFQQEVIQMIVEGTLLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   ++   NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NAAMMEEYLKFICNRRLAQLGLPEQYRGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|299771426|ref|YP_003733452.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. DR1]
 gi|298701514|gb|ADI92079.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. DR1]
          Length = 427

 Score =  174 bits (442), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 78/124 (62%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLW+ EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWSAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|226945386|ref|YP_002800459.1| ribonucleotide-diphosphate reductase subunit beta [Azotobacter
           vinelandii DJ]
 gi|226720313|gb|ACO79484.1| Ribonucleoside-diphosphate reductase beta subunit [Azotobacter
           vinelandii DJ]
          Length = 416

 Score =  174 bits (441), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLW  E + ++  M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDMINQIKIENPHLWDAEMKDEATQMILQGTQLEIEYARDTMPRGVLGM 351

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E Y++FIANRR  Q+GL   +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 352 NATMMEDYLKFIANRRLSQLGLPEQYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411

Query: 121 ELKWD 125
            L WD
Sbjct: 412 ALSWD 416


>gi|119478322|ref|ZP_01618353.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2143]
 gi|119448662|gb|EAW29907.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2143]
          Length = 422

 Score =  174 bits (441), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 101/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENP LW+++FQQ+   M+ E T LEI YA ++MP+G +G+
Sbjct: 298 LRDESMHLNFGIDVINQIKLENPQLWSEKFQQEIIQMILEGTQLEIEYARDSMPRGVLGM 357

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+QFI+NRR +Q+GL   ++  +NPFPWMSE++DL+KEKNFFETRV EYQ G 
Sbjct: 358 NAAMMEEYLQFISNRRLNQLGLPEQYQGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 417

Query: 121 ELKWD 125
            L W+
Sbjct: 418 ALNWE 422


>gi|88812072|ref|ZP_01127324.1| ribonucleotide-diphosphate reductase beta subunit [Nitrococcus
           mobilis Nb-231]
 gi|88790576|gb|EAR21691.1| ribonucleotide-diphosphate reductase beta subunit [Nitrococcus
           mobilis Nb-231]
          Length = 370

 Score =  174 bits (441), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK ENPHLWT EFQ  ++  + E+  LE+ YA +T+P+G +GL
Sbjct: 246 LRDESIHLNFGIDVINQIKQENPHLWTAEFQATAQRTILESMALEVDYARDTLPRGVLGL 305

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  QIGL   F   ENP PWMSE++DLKKEKNFFETRVTEY+ G 
Sbjct: 306 NAAMIEEYLRFITNRRLAQIGLTEAFPGAENPLPWMSELVDLKKEKNFFETRVTEYRTGG 365

Query: 121 ELKWD 125
            L W+
Sbjct: 366 ALSWE 370


>gi|294339031|emb|CAZ87378.1| putative Ribonucleoside-diphosphate reductase (ribonucleoside
           diphosphate reductase, beta subunit) [Thiomonas sp. 3As]
          Length = 410

 Score =  174 bits (441), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID++NQIK+ENPHLWT EF+++   + H+A  LE  YA +TMP+G +GL
Sbjct: 286 LRDESMHTNFGIDLVNQIKLENPHLWTPEFKRELTGLFHQAVELEYRYAEDTMPRGVLGL 345

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FIANRR  QIGL+ +F   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 346 NASMFKGYLRFIANRRAVQIGLDAIFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 405

Query: 121 ELKWD 125
            L W+
Sbjct: 406 ALSWE 410


>gi|224825450|ref|ZP_03698555.1| Ribonucleoside-diphosphate reductase [Lutiella nitroferrum 2002]
 gi|224602371|gb|EEG08549.1| Ribonucleoside-diphosphate reductase [Lutiella nitroferrum 2002]
          Length = 360

 Score =  174 bits (441), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K ENP LWT+EF+ +   +   A  LE AYA +TMP+G +GL
Sbjct: 236 LRDESMHCNFGIDLINTVKQENPQLWTEEFKAEITGLFKHAVELEYAYAEDTMPRGVLGL 295

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRR  QIGLEP+F    NPFPWMSE+IDLKKEKNFFETRVTEYQ G 
Sbjct: 296 NAAMFKEYLRFIANRRMQQIGLEPMFPGVTNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 355

Query: 121 ELKWD 125
            L WD
Sbjct: 356 ALSWD 360


>gi|34497739|ref|NP_901954.1| ribonucleotide-diphosphate reductase subunit beta [Chromobacterium
           violaceum ATCC 12472]
 gi|34103595|gb|AAQ59956.1| ribonucleoside-diphosphate reductase system [Chromobacterium
           violaceum ATCC 12472]
          Length = 360

 Score =  174 bits (440), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENP LWT  F+ +   +  +A  LE AYA +TMP+G +GL
Sbjct: 236 LRDESMHCNFGIDLINTIKLENPLLWTDSFKAEIVDLFKQAVELEYAYAEDTMPRGVLGL 295

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRR  QIGL+PLF    NPFPWMSE+IDLKKEKNFFETRVTEYQ G 
Sbjct: 296 NASMFKEYLRFIANRRMQQIGLDPLFPGVNNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 355

Query: 121 ELKWD 125
            L WD
Sbjct: 356 ALSWD 360


>gi|296135014|ref|YP_003642256.1| Ribonucleoside-diphosphate reductase [Thiomonas intermedia K12]
 gi|295795136|gb|ADG29926.1| Ribonucleoside-diphosphate reductase [Thiomonas intermedia K12]
          Length = 402

 Score =  174 bits (440), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID++NQIK+ENPHLWT EF+++   + H+A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESMHTNFGIDLVNQIKLENPHLWTPEFKRELTGLFHQAVELEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y++FIANRR  QIGL+ +F   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NASMFKGYLRFIANRRAVQIGLDAIFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 397

Query: 121 ELKWD 125
            L W+
Sbjct: 398 ALSWE 402


>gi|299533977|ref|ZP_07047329.1| ribonucleotide-diphosphate reductase subunit beta [Comamonas
           testosteroni S44]
 gi|298717886|gb|EFI58891.1| ribonucleotide-diphosphate reductase subunit beta [Comamonas
           testosteroni S44]
          Length = 363

 Score =  174 bits (440), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+Q+   +  +A  LE  YA +TMP+G +G+
Sbjct: 239 LRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQKAVELEYRYAEDTMPRGVLGM 298

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 299 NASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 358

Query: 121 ELKWD 125
            L WD
Sbjct: 359 ALSWD 363


>gi|91787004|ref|YP_547956.1| ribonucleotide-diphosphate reductase subunit beta [Polaromonas sp.
           JS666]
 gi|91696229|gb|ABE43058.1| Ribonucleoside-diphosphate reductase [Polaromonas sp. JS666]
          Length = 406

 Score =  174 bits (440), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+ + + +  +A  LE  YA +TMP+G +GL
Sbjct: 282 LRDESMHCNFGIDLINQLKLENPHLWTAEFKAEIKALFLKAVELEYRYAEDTMPRGVLGL 341

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 342 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 401

Query: 121 ELKWD 125
            L WD
Sbjct: 402 ALSWD 406


>gi|221065168|ref|ZP_03541273.1| Ribonucleoside-diphosphate reductase [Comamonas testosteroni KF-1]
 gi|220710191|gb|EED65559.1| Ribonucleoside-diphosphate reductase [Comamonas testosteroni KF-1]
          Length = 363

 Score =  173 bits (439), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+Q+   +   A  LE  YA +TMP+G +G+
Sbjct: 239 LRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQRAVELEYRYAEDTMPRGVLGM 298

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 299 NASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 358

Query: 121 ELKWD 125
            L WD
Sbjct: 359 ALSWD 363


>gi|326315613|ref|YP_004233285.1| ribonucleoside-diphosphate reductase [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372449|gb|ADX44718.1| Ribonucleoside-diphosphate reductase [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 387

 Score =  173 bits (439), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+++ + +  +A  LE  YA +TMP+G +G+
Sbjct: 263 LRDESMHCNFGIDLINQLKLENPHLWTAEFKEEIKGLFMKAVELEYQYAEDTMPRGVLGM 322

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 323 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 382

Query: 121 ELKWD 125
            L WD
Sbjct: 383 ALSWD 387


>gi|294840478|ref|ZP_06785161.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. 6014059]
          Length = 427

 Score =  173 bits (438), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 78/124 (62%), Positives = 96/124 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMS ++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSGMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|313200886|ref|YP_004039544.1| ribonucleoside-diphosphate reductase [Methylovorus sp. MP688]
 gi|312440202|gb|ADQ84308.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. MP688]
          Length = 381

 Score =  173 bits (438), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 75/125 (60%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K+ENPHLWT EF+++ + ++ +A  LE  YA +TMP+G +GL
Sbjct: 257 LRDESMHCNFGIDLINTLKLENPHLWTPEFREEIKRLMQQAVELEYRYAEDTMPRGVLGL 316

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRR  QIG++ L+    NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 317 NAAMFKEYLRFIANRRMQQIGIDALYPGASNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 376

Query: 121 ELKWD 125
            L WD
Sbjct: 377 ALSWD 381


>gi|264680215|ref|YP_003280125.1| ribonucleotide reductase [Comamonas testosteroni CNB-2]
 gi|262210731|gb|ACY34829.1| ribonucleotide reductase [Comamonas testosteroni CNB-2]
          Length = 336

 Score =  173 bits (438), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+Q+   +  +A  LE  YA +TMP+G +G+
Sbjct: 212 LRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQKAVELEYRYAEDTMPRGVLGM 271

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 272 NASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 331

Query: 121 ELKWD 125
            L WD
Sbjct: 332 ALSWD 336


>gi|253998799|ref|YP_003050862.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. SIP3-4]
 gi|253985478|gb|ACT50335.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. SIP3-4]
          Length = 383

 Score =  173 bits (438), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 75/125 (60%), Positives = 99/125 (79%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN +K+ENPHLWT EF+++ + ++ +A  LE  YA +TMP+G +GL
Sbjct: 259 LRDESMHCNFGIDLINTLKLENPHLWTPEFREEIKRLMQQAVELEYRYAEDTMPRGVLGL 318

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   ++Y++FIANRR  QIG++ L+    NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 319 NAAMFKEYLRFIANRRMQQIGIDALYPGASNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 378

Query: 121 ELKWD 125
            L WD
Sbjct: 379 ALSWD 383


>gi|120609557|ref|YP_969235.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax
           citrulli AAC00-1]
 gi|120588021|gb|ABM31461.1| Ribonucleoside-diphosphate reductase [Acidovorax citrulli AAC00-1]
          Length = 387

 Score =  173 bits (438), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 98/125 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+++ + +  +A  LE  YA +TMP+G +G+
Sbjct: 263 LRDESMHCNFGIDLINQLKLENPHLWTAEFKEEIKGLFMKAVELEYQYAEDTMPRGVLGM 322

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 323 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 382

Query: 121 ELKWD 125
            L WD
Sbjct: 383 ALSWD 387


>gi|121595925|ref|YP_987821.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax sp.
           JS42]
 gi|222112113|ref|YP_002554377.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax
           ebreus TPSY]
 gi|120608005|gb|ABM43745.1| Ribonucleoside-diphosphate reductase [Acidovorax sp. JS42]
 gi|221731557|gb|ACM34377.1| Ribonucleoside-diphosphate reductase [Acidovorax ebreus TPSY]
          Length = 396

 Score =  173 bits (438), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+ + + +  +A  LE  YA +TMP+G +G+
Sbjct: 272 LRDESMHCNFGIDLINQLKLENPHLWTAEFKDEIKALFIKAVELEYRYAEDTMPRGVLGM 331

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 332 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 391

Query: 121 ELKWD 125
            L WD
Sbjct: 392 ALSWD 396


>gi|332039867|gb|EGI76262.1| ribonucleotide-diphosphate reductase subunit beta [Hylemonella
           gracilis ATCC 19624]
          Length = 399

 Score =  173 bits (438), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA +TMP+G +G+
Sbjct: 275 LRDESMHCNFGIDLINQIKLENPQLWTPEFKAEIRGLFEKAVELEYRYAEDTMPRGVLGM 334

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 335 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 394

Query: 121 ELKWD 125
            L WD
Sbjct: 395 ALSWD 399


>gi|255019430|ref|ZP_05291537.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
 gi|254971128|gb|EET28583.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
          Length = 345

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 75/125 (60%), Positives = 100/125 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT+ FQQ+   ++ +   LE AYA +TMP+G +GL
Sbjct: 220 LRDESMHCNFGIDLINQIKLENPQLWTEGFQQEIVGLIRQGVELECAYADDTMPRGILGL 279

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  ++Y+++I NRR  QIGL+P ++  +NPFPWMSE++DLKKEKNFFE+RVT+YQ G 
Sbjct: 280 NAPMFKEYVRYIGNRRLSQIGLKPQWENVQNPFPWMSEMMDLKKEKNFFESRVTDYQTGG 339

Query: 121 ELKWD 125
            L WD
Sbjct: 340 ALSWD 344


>gi|241764092|ref|ZP_04762129.1| Ribonucleoside-diphosphate reductase [Acidovorax delafieldii 2AN]
 gi|241366556|gb|EER61044.1| Ribonucleoside-diphosphate reductase [Acidovorax delafieldii 2AN]
          Length = 398

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENPHLWT EF+ + + +   A  LE  YA +TMP+G +G+
Sbjct: 274 LRDESMHCNFGIDLINQLKLENPHLWTAEFKAEIKALFMRAVELEYRYAEDTMPRGVLGM 333

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 334 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 393

Query: 121 ELKWD 125
            L WD
Sbjct: 394 ALSWD 398


>gi|124268397|ref|YP_001022401.1| ribonucleotide-diphosphate reductase subunit beta [Methylibium
           petroleiphilum PM1]
 gi|124261172|gb|ABM96166.1| Ribonucleoside-diphosphate reductase [Methylibium petroleiphilum
           PM1]
          Length = 403

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT EF+ + + +  +A  LE  YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPQLWTAEFKAEIKALFMKAVELEYRYAEDTMPRGVLGL 338

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 339 NASMFKGYLRYIANRRATQIGLEELFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 398

Query: 121 ELKWD 125
            L WD
Sbjct: 399 ALSWD 403


>gi|52842002|ref|YP_095801.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|52629113|gb|AAU27854.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
          Length = 381

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+ +   ++ E   LE  YA +TMP G +G+
Sbjct: 255 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEMIQLIREGVELEYQYARDTMPHGILGM 314

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 315 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 374

Query: 121 ELKWD 125
            L WD
Sbjct: 375 TLSWD 379


>gi|226953559|ref|ZP_03824023.1| ribonucleotide reductase, beta subunit [Acinetobacter sp. ATCC
           27244]
 gi|294649451|ref|ZP_06726876.1| ribonucleotide-diphosphate reductase beta subunit [Acinetobacter
           haemolyticus ATCC 19194]
 gi|226835696|gb|EEH68079.1| ribonucleotide reductase, beta subunit [Acinetobacter sp. ATCC
           27244]
 gi|292824656|gb|EFF83434.1| ribonucleotide-diphosphate reductase beta subunit [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 427

 Score =  172 bits (436), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 78/124 (62%), Positives = 96/124 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENPHLWT  FQQ+   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTATFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NASMMEEYLKFICNRRLAQLGLPEQFAGVTNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|148359319|ref|YP_001250526.1| ribonucleoside-diphosphate reductase subunit beta [Legionella
           pneumophila str. Corby]
 gi|296107366|ref|YP_003619066.1| ribonucleoside-diphosphate reductase beta chain [Legionella
           pneumophila 2300/99 Alcoy]
 gi|148281092|gb|ABQ55180.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           pneumophila str. Corby]
 gi|295649267|gb|ADG25114.1| ribonucleoside-diphosphate reductase beta chain [Legionella
           pneumophila 2300/99 Alcoy]
 gi|307610475|emb|CBX00047.1| hypothetical protein LPW_18021 [Legionella pneumophila 130b]
          Length = 367

 Score =  172 bits (436), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+ +   ++ E   LE  YA +TMP G +G+
Sbjct: 241 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEMIQLIREGVELEYQYARDTMPHGILGM 300

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 301 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 360

Query: 121 ELKWD 125
            L WD
Sbjct: 361 TLSWD 365


>gi|54294662|ref|YP_127077.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila str. Lens]
 gi|53754494|emb|CAH15978.1| hypothetical protein lpl1739 [Legionella pneumophila str. Lens]
          Length = 367

 Score =  172 bits (436), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+ +   ++ E   LE  YA +TMP G +G+
Sbjct: 241 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEIIQLIREGVELEYQYARDTMPHGILGM 300

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 301 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 360

Query: 121 ELKWD 125
            L WD
Sbjct: 361 TLSWD 365


>gi|54297688|ref|YP_124057.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila str. Paris]
 gi|53751473|emb|CAH12891.1| hypothetical protein lpp1739 [Legionella pneumophila str. Paris]
          Length = 367

 Score =  172 bits (436), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+ +   ++ E   LE  YA +TMP G +G+
Sbjct: 241 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEIIQLIREGVELEYQYARDTMPHGILGM 300

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 301 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 360

Query: 121 ELKWD 125
            L WD
Sbjct: 361 TLSWD 365


>gi|262376783|ref|ZP_06070011.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           lwoffii SH145]
 gi|262308493|gb|EEY89628.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           lwoffii SH145]
          Length = 427

 Score =  172 bits (435), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 78/124 (62%), Positives = 97/124 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENP LWT EFQ++   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPGLWTTEFQEEIIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FIANRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NAGMMEEYLKFIANRRLAQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|145588393|ref|YP_001154990.1| ribonucleotide-diphosphate reductase subunit beta [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145046799|gb|ABP33426.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 394

 Score =  172 bits (435), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 75/125 (60%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT  F+ + +++  +A  LE  YA +TMP+G +GL
Sbjct: 270 LRDESMHCNFGIDLINQIKLENPQLWTSAFKDEIKSIFEKAVELEYRYAEDTMPRGVLGL 329

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y+++I NRRC QIGL+ +F   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 330 NAPMFKGYLRYICNRRCLQIGLDAMFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 389

Query: 121 ELKWD 125
            L W+
Sbjct: 390 ALSWE 394


>gi|158341282|ref|YP_001522354.1| ribonucleotide-diphosphate reductase subunit beta [Acaryochloris
           marina MBIC11017]
 gi|158311523|gb|ABW33134.1| ribonucleoside-diphosphate reductase, beta subunit [Acaryochloris
           marina MBIC11017]
          Length = 384

 Score =  171 bits (434), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID++N IK ENPHLWT EF ++ R +   A  LE  YA +TMP+G +GL
Sbjct: 260 LRDESMHCNFGIDLVNAIKQENPHLWTPEFCEEIRDLFKRAVELEYRYAEDTMPRGVLGL 319

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGL+P+F   ENPFPWMSE++DLKKE+NFFETRV EYQ G 
Sbjct: 320 NASMFKSYLRYIANRRSQQIGLDPIFASEENPFPWMSEMVDLKKERNFFETRVLEYQTGG 379

Query: 121 ELKWD 125
            L WD
Sbjct: 380 ALSWD 384


>gi|254496936|ref|ZP_05109775.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           drancourtii LLAP12]
 gi|254353845|gb|EET12541.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           drancourtii LLAP12]
          Length = 369

 Score =  171 bits (433), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+++   ++ +   +E  YA +TMP G +G+
Sbjct: 240 LRDESMHMNFGIDVINQIKIENPHLWTPEFKEEIIQLIKDGVAMEYQYAKDTMPHGILGM 299

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 300 NAEMFEEYLHFIANRRLNQIGLPEQYPGAENPFPWMSEMMDLKKEKNFFETRVIEYQAGG 359

Query: 121 ELKWD 125
            L WD
Sbjct: 360 TLSWD 364


>gi|89902117|ref|YP_524588.1| ribonucleotide-diphosphate reductase subunit beta [Rhodoferax
           ferrireducens T118]
 gi|89346854|gb|ABD71057.1| Ribonucleoside-diphosphate reductase [Rhodoferax ferrireducens
           T118]
          Length = 400

 Score =  171 bits (433), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENP LWT EF+ + + +  +A  LE  YA +TMP+G +G+
Sbjct: 276 LRDESMHCNFGIDLINQLKLENPQLWTSEFKAEIKALFEQAVELEYRYAEDTMPRGVLGM 335

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 336 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 395

Query: 121 ELKWD 125
            L WD
Sbjct: 396 ALSWD 400


>gi|332110818|gb|EGJ10995.1| ribonucleotide-diphosphate reductase subunit beta [Rubrivivax
           benzoatilyticus JA2]
          Length = 385

 Score =  170 bits (431), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 94/125 (75%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT  F+ + R +   A  LE  YA +TMP+G +G+
Sbjct: 261 LRDESMHCNFGIDLINQIKLENPQLWTPAFKAEIRALFERAVELEYRYAEDTMPRGVLGM 320

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV +YQ G 
Sbjct: 321 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIDYQSGG 380

Query: 121 ELKWD 125
            L WD
Sbjct: 381 ALSWD 385


>gi|262369327|ref|ZP_06062655.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           johnsonii SH046]
 gi|262315395|gb|EEY96434.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           johnsonii SH046]
          Length = 427

 Score =  170 bits (431), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 77/124 (62%), Positives = 96/124 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+INQIKIENP LWT EFQ++   M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPSLWTAEFQEEIIQMILEGTMLEIEYARDTMPRGVLGM 363

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFFETRVT+YQ G 
Sbjct: 364 NAAMMEEYLKFICNRRLAQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423

Query: 121 ELKW 124
            L W
Sbjct: 424 ALSW 427


>gi|121606275|ref|YP_983604.1| ribonucleotide-diphosphate reductase subunit beta [Polaromonas
           naphthalenivorans CJ2]
 gi|120595244|gb|ABM38683.1| Ribonucleoside-diphosphate reductase [Polaromonas naphthalenivorans
           CJ2]
          Length = 387

 Score =  170 bits (431), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENP LWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 263 LRDESMHCNFGIDLINQLKLENPQLWTAEFKAEINALFMKAVELEYRYAEDTMPRGVLGL 322

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 323 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 382

Query: 121 ELKWD 125
            L WD
Sbjct: 383 ALSWD 387


>gi|270156779|ref|ZP_06185436.1| ribonucleotide-diphosphate reductase beta subunit [Legionella
           longbeachae D-4968]
 gi|289164772|ref|YP_003454910.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           longbeachae NSW150]
 gi|269988804|gb|EEZ95058.1| ribonucleotide-diphosphate reductase beta subunit [Legionella
           longbeachae D-4968]
 gi|288857945|emb|CBJ11805.1| putative ribonucleoside-diphosphate reductase, beta subunit
           [Legionella longbeachae NSW150]
          Length = 366

 Score =  170 bits (430), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT EF+++   ++ +   LE  YA +TMP+G +G+
Sbjct: 240 LRDESMHMNFGIDVINQIKIENPHLWTSEFKEEIIQLIRQGVDLEYQYAKDTMPQGILGM 299

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   E+Y+ FIANRR  QIGL   +    NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 300 NAEMFEEYLHFIANRRLTQIGLAEQYPGAVNPFPWMSEMMDLKKEKNFFETRVIEYQAGG 359

Query: 121 ELKWD 125
            L WD
Sbjct: 360 TLSWD 364


>gi|239813962|ref|YP_002942872.1| ribonucleotide-diphosphate reductase subunit beta [Variovorax
           paradoxus S110]
 gi|239800539|gb|ACS17606.1| Ribonucleoside-diphosphate reductase [Variovorax paradoxus S110]
          Length = 391

 Score =  170 bits (430), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENP LWT EF+ + + +  +A  LE  YA +TMP+G +G+
Sbjct: 267 LRDESMHCNFGIDLINQLKLENPGLWTPEFKAEIKALFLKAVELEYKYAEDTMPRGVLGM 326

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 327 NASMFKGYLRYIANRRAQQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 386

Query: 121 ELKWD 125
            L WD
Sbjct: 387 ALSWD 391


>gi|171057074|ref|YP_001789423.1| ribonucleotide-diphosphate reductase subunit beta [Leptothrix
           cholodnii SP-6]
 gi|170774519|gb|ACB32658.1| Ribonucleoside-diphosphate reductase [Leptothrix cholodnii SP-6]
          Length = 402

 Score =  169 bits (429), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+IN IK+ENPHLWT  F+ + + +  +A  LE  YA +TMP+G +GL
Sbjct: 278 LRDESMHCNFGIDLINAIKLENPHLWTPAFKAEIKALFLKAVELEYRYAEDTMPRGVLGL 337

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 338 NASMFKGYLRYIANRRATQIGLEELFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 397

Query: 121 ELKWD 125
            L WD
Sbjct: 398 ALSWD 402


>gi|319791701|ref|YP_004153341.1| ribonucleoside-diphosphate reductase [Variovorax paradoxus EPS]
 gi|315594164|gb|ADU35230.1| Ribonucleoside-diphosphate reductase [Variovorax paradoxus EPS]
          Length = 411

 Score =  169 bits (429), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENP LWT EF+ + + +   A  LE  YA +TMP+G +G+
Sbjct: 287 LRDESMHCNFGIDLINQLKLENPGLWTPEFKAEIKDLFMRAVELEYKYAEDTMPRGVLGM 346

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 347 NASMFKGYLRYIANRRAQQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 406

Query: 121 ELKWD 125
            L WD
Sbjct: 407 ALSWD 411


>gi|160896947|ref|YP_001562529.1| ribonucleotide-diphosphate reductase subunit beta [Delftia
           acidovorans SPH-1]
 gi|160362531|gb|ABX34144.1| Ribonucleoside-diphosphate reductase [Delftia acidovorans SPH-1]
          Length = 363

 Score =  169 bits (428), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 96/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENP LWT EF+++   +  +A  LE  YA +TMP+G +G+
Sbjct: 239 LRDESMHCNFGIDLINQLKLENPQLWTPEFKEEITALFVKAVELEYRYAEDTMPRGVLGM 298

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 299 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 358

Query: 121 ELKWD 125
            L WD
Sbjct: 359 ALSWD 363


>gi|160871658|ref|ZP_02061790.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsiella
           grylli]
 gi|159120457|gb|EDP45795.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsiella
           grylli]
          Length = 362

 Score =  167 bits (422), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 92/125 (73%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIK+ENPHLWT EF++    ++ E   LE  YA +T+P+G +GL
Sbjct: 237 LRDESMHLNFGIDVINQIKLENPHLWTPEFKRYVINLIKEGVDLEYQYALDTLPRGILGL 296

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++FI NRR  QIGL   +    NP PWMSE+IDLKKEKNFFETRVTEYQ G 
Sbjct: 297 NANLMWDYLRFIGNRRFTQIGLAEQYPGVSNPLPWMSEIIDLKKEKNFFETRVTEYQTGG 356

Query: 121 ELKWD 125
            L WD
Sbjct: 357 SLNWD 361


>gi|255019898|ref|ZP_05291973.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
 gi|254970678|gb|EET28165.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
          Length = 374

 Score =  167 bits (422), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 74/125 (59%), Positives = 97/125 (77%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT+ FQ++  +++ +   LE AYA +TMP+G +GL
Sbjct: 250 LRDESMHCNFGIDLINQIKVENPDLWTEPFQEEIVSLIRKGVELECAYADDTMPRGVLGL 309

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  + Y+++I NRR  Q+GL   +   +NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 310 NAPIFKDYVKYIGNRRLQQLGLPVQWAGIQNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 369

Query: 121 ELKWD 125
            L WD
Sbjct: 370 ALSWD 374


>gi|171463021|ref|YP_001797134.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171192559|gb|ACB43520.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 394

 Score =  166 bits (421), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 73/125 (58%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LW   F+ + +++  +A  LE  YA +TMP+G +GL
Sbjct: 270 LRDESMHCNFGIDLINQIKLENPQLWISAFKDEIKSIFEKAVELEYRYAEDTMPRGVLGL 329

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP  +  +++I NRRC QIGL+ +F   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 330 NAPMFKGCLRYICNRRCLQIGLDAMFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 389

Query: 121 ELKWD 125
            L W+
Sbjct: 390 ALSWE 394


>gi|319764328|ref|YP_004128265.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           BC]
 gi|330826374|ref|YP_004389677.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           K601]
 gi|317118889|gb|ADV01378.1| Ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           BC]
 gi|329311746|gb|AEB86161.1| Ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           K601]
          Length = 396

 Score =  166 bits (420), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 74/125 (59%), Positives = 95/125 (76%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQ+K+ENP LWT  F+ + + +  +A  LE  YA +TMP+G +G+
Sbjct: 272 LRDESMHCNFGIDLINQLKLENPQLWTPAFKDEIKGLFLKAVDLEYRYAEDTMPRGVLGM 331

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGL+ LF   ENPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 332 NASMFKGYLRYIANRRATQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 391

Query: 121 ELKWD 125
            L WD
Sbjct: 392 ALSWD 396


>gi|268316001|ref|YP_003289720.1| Ribonucleoside-diphosphate reductase [Rhodothermus marinus DSM
           4252]
 gi|262333535|gb|ACY47332.1| Ribonucleoside-diphosphate reductase [Rhodothermus marinus DSM
           4252]
          Length = 347

 Score =  166 bits (419), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 75/125 (60%), Positives = 99/125 (79%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP LWT EFQ++ + ++ EA  LE+AYA++ +P+G +GL
Sbjct: 223 LRDETIHLNFGIDLINGIKAENPELWTPEFQREVQQLIEEAVELEVAYAYDCLPRGVLGL 282

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            AP   +Y+Q+IA+RR  +IGL+  +  ++NPFPWMSE IDL KEKNFFETRVTEYQQ A
Sbjct: 283 TAPMFREYVQYIADRRLERIGLKARYG-SKNPFPWMSETIDLLKEKNFFETRVTEYQQAA 341

Query: 121 ELKWD 125
            L WD
Sbjct: 342 ALSWD 346


>gi|149927167|ref|ZP_01915424.1| ribonucleotide-diphosphate reductase beta subunit [Limnobacter sp.
           MED105]
 gi|149824106|gb|EDM83327.1| ribonucleotide-diphosphate reductase beta subunit [Limnobacter sp.
           MED105]
          Length = 399

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 74/125 (59%), Positives = 94/125 (75%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H  FGID+IN +K+ENPHLWT EF+++ + M  +A  LE AYA +TMP+G +GL
Sbjct: 275 LRDESAHCTFGIDLINTVKLENPHLWTPEFKEEIKAMFRKAVELEHAYAVDTMPRGVLGL 334

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N+    +YM+FI NRR +QIGL  L++   NPFPWMSE++DLKKE NFFE RVTEYQ G 
Sbjct: 335 NSAQFMEYMKFICNRRSNQIGLGTLYEGATNPFPWMSEMMDLKKETNFFERRVTEYQTGG 394

Query: 121 ELKWD 125
            L WD
Sbjct: 395 ALSWD 399


>gi|198284354|ref|YP_002220675.1| ribonucleotide-diphosphate reductase subunit beta
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|198248875|gb|ACH84468.1| Ribonucleoside-diphosphate reductase [Acidithiobacillus
           ferrooxidans ATCC 53993]
          Length = 374

 Score =  164 bits (415), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 73/125 (58%), Positives = 94/125 (75%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+ NQIK+ENP LWT+ FQQ+   ++     LE AYA +TMP+G +GL
Sbjct: 250 LRDESMHCNFGIDMANQIKVENPQLWTEAFQQEIIDLIRRGVELECAYADDTMPRGVLGL 309

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP   +Y+++I NRR  Q+GL   +   +NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 310 NAPVFREYVKYIGNRRLVQLGLPQQYPGVQNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 369

Query: 121 ELKWD 125
            L W+
Sbjct: 370 ALSWE 374


>gi|218665361|ref|YP_002427016.1| ribonucleoside-diphosphate reductase, beta subunit
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|218517574|gb|ACK78160.1| ribonucleoside-diphosphate reductase, beta subunit
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 380

 Score =  164 bits (415), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 73/125 (58%), Positives = 94/125 (75%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+ NQIK+ENP LWT+ FQQ+   ++     LE AYA +TMP+G +GL
Sbjct: 256 LRDESMHCNFGIDMANQIKVENPQLWTEAFQQEIIDLIRRGVELECAYADDTMPRGVLGL 315

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NAP   +Y+++I NRR  Q+GL   +   +NPFPWMSE++DLKKEKNFFETRVTEYQ G 
Sbjct: 316 NAPVFREYVKYIGNRRLVQLGLPQQYPGVQNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 375

Query: 121 ELKWD 125
            L W+
Sbjct: 376 ALSWE 380


>gi|121608466|ref|YP_996273.1| ribonucleotide-diphosphate reductase subunit beta
           [Verminephrobacter eiseniae EF01-2]
 gi|121553106|gb|ABM57255.1| Ribonucleoside-diphosphate reductase [Verminephrobacter eiseniae
           EF01-2]
          Length = 399

 Score =  163 bits (412), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 75/125 (60%), Positives = 92/125 (73%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H NFGID+INQIK+ENP LWT  F+ +   +  +A  LE  YA +TMP G +G+
Sbjct: 275 LRDESMHCNFGIDLINQIKLENPLLWTTAFKAEIEALFLQAVELEYRYAEDTMPHGVLGM 334

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA   + Y+++IANRR  QIGLE LF    NPFPWMSE+IDLKKE+NFFETRV EYQ G 
Sbjct: 335 NASMFKGYLRYIANRRATQIGLETLFPQETNPFPWMSEMIDLKKERNFFETRVIEYQSGG 394

Query: 121 ELKWD 125
            L WD
Sbjct: 395 ALCWD 399


>gi|298243909|ref|ZP_06967716.1| Ribonucleoside-diphosphate reductase [Ktedonobacter racemifer DSM
           44963]
 gi|297556963|gb|EFH90827.1| Ribonucleoside-diphosphate reductase [Ktedonobacter racemifer DSM
           44963]
          Length = 361

 Score =  157 bits (398), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 72/125 (57%), Positives = 94/125 (75%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP LWT EFQ     ++  A  LEIAYA++ +P G +GL
Sbjct: 238 LRDETIHLNFGIDLINGIKAENPELWTTEFQAHIYDLIKRAVELEIAYAYDCLPNGILGL 297

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA S   Y+Q +A+RR  +IGL P+F ++ +PFPWMSE +DL KEKNFFETRVTEYQ  +
Sbjct: 298 NAESFRSYVQHVADRRLERIGLAPIF-HSSHPFPWMSETMDLSKEKNFFETRVTEYQAAS 356

Query: 121 ELKWD 125
            L+W+
Sbjct: 357 TLEWE 361


>gi|282890382|ref|ZP_06298910.1| hypothetical protein pah_c016o114 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499764|gb|EFB42055.1| hypothetical protein pah_c016o114 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 350

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/124 (59%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGID+IN IK ENP +WT EF+ +   M+ EA  LEI YA + +P G +GL
Sbjct: 228 LRDESIHLNFGIDLINTIKEENPEVWTPEFKDQIIDMVKEAVELEIQYAADCLPNGILGL 287

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y+ +IA+RR  +IGL+P +  T NPFPWMSEV+DL KEKNFFETRVT+YQ GA
Sbjct: 288 NAALFRDYVGYIADRRLERIGLKPQYN-TANPFPWMSEVMDLDKEKNFFETRVTQYQSGA 346

Query: 121 ELKW 124
            L W
Sbjct: 347 ALVW 350


>gi|15834835|ref|NP_296594.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Nigg]
 gi|270285001|ref|ZP_06194395.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Nigg]
 gi|270289024|ref|ZP_06195326.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Weiss]
 gi|301336399|ref|ZP_07224601.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum MopnTet14]
 gi|14195147|sp|Q9PL92|RIR2_CHLMU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|7190253|gb|AAF39087.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydia
           muridarum Nigg]
          Length = 346

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 72/124 (58%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFG+D+IN IK ENP +WT E QQ+   M+  A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGVDLINGIKEENPEIWTTELQQEIIEMIQRAVDLEIDYARDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRVTEYQ  A
Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVTEYQHAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 SLTW 346


>gi|166154172|ref|YP_001654290.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 434/Bu]
 gi|166155047|ref|YP_001653302.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
 gi|301335416|ref|ZP_07223660.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis L2tet1]
 gi|165930160|emb|CAP03644.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis 434/Bu]
 gi|165931035|emb|CAP06598.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
          Length = 346

 Score =  154 bits (388), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 72/124 (58%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E QQ+   ++  A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRVTEYQ  A
Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVTEYQHAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 SLTW 346


>gi|297621807|ref|YP_003709944.1| ribonucleoside-diphosphate reductase beta subunit [Waddlia
           chondrophila WSU 86-1044]
 gi|297377108|gb|ADI38938.1| ribonucleoside-diphosphate reductase beta subunit [Waddlia
           chondrophila WSU 86-1044]
          Length = 344

 Score =  153 bits (387), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 69/125 (55%), Positives = 92/125 (73%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +W ++   +   ++ +A  LEIAYA E +P G +GL
Sbjct: 221 LRDETIHLNFGIDLINGIKAENPEIWNEDLTDEINGLVQQAVELEIAYAKECLPHGVLGL 280

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    +Y+Q++A+RR  +IGL  ++K + NPFPWMSE +DL KEKNFFETRVTEYQ  A
Sbjct: 281 NAGLFVEYVQYVADRRLERIGLSAIYK-SSNPFPWMSETMDLTKEKNFFETRVTEYQSAA 339

Query: 121 ELKWD 125
            L WD
Sbjct: 340 VLSWD 344


>gi|325110864|ref|YP_004271932.1| ribonucleotide reductase [Planctomyces brasiliensis DSM 5305]
 gi|324971132|gb|ADY61910.1| ribonucleotide reductase [Planctomyces brasiliensis DSM 5305]
          Length = 353

 Score =  153 bits (386), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 72/125 (57%), Positives = 91/125 (72%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE+ HLNFGID+IN IK ENP +WT++FQQ+   ++ EA  LEI YA + +P+G +GL
Sbjct: 230 LRDETTHLNFGIDLINGIKHENPDIWTEKFQQEIIDLVKEAVELEIDYARDCLPRGVLGL 289

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N      Y+Q IA+RR  +IGL  L+  + NPFPWMSE +DL KEKNFFETRVTEYQ G 
Sbjct: 290 NGNLFRDYVQHIADRRLERIGLPTLYN-SSNPFPWMSETMDLAKEKNFFETRVTEYQTGG 348

Query: 121 ELKWD 125
            L WD
Sbjct: 349 TLSWD 353


>gi|283779060|ref|YP_003369815.1| ribonucleoside-diphosphate reductase [Pirellula staleyi DSM 6068]
 gi|283437513|gb|ADB15955.1| Ribonucleoside-diphosphate reductase [Pirellula staleyi DSM 6068]
          Length = 357

 Score =  153 bits (386), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 70/125 (56%), Positives = 91/125 (72%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN ++ ENP +WT +FQ++   ++ EA  LE+AYA + +P+G VGL
Sbjct: 234 LRDETIHLNFGIDLINGVRAENPGIWTADFQERVIKLVREAVELEVAYAWDCLPRGIVGL 293

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N      Y+Q IA+RR  +IGL P    + NPFPWMSE +DL KEKNFFETRVTEYQ  A
Sbjct: 294 NGELFRDYVQHIADRRLERIGL-PTQYGSANPFPWMSETMDLGKEKNFFETRVTEYQSAA 352

Query: 121 ELKWD 125
            L WD
Sbjct: 353 SLAWD 357


>gi|159899093|ref|YP_001545340.1| ribonucleotide-diphosphate reductase subunit beta [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159892132|gb|ABX05212.1| Ribonucleoside-diphosphate reductase [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 342

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 69/125 (55%), Positives = 92/125 (73%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFG+D+IN IK ENP +WT EFQ +   ++ ++  LE  YA E +P+G +GL
Sbjct: 219 LRDETIHLNFGVDLINGIKAENPAIWTNEFQAEIVQLIRQSVELEAQYAAECLPRGVMGL 278

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y+Q+IA+RR  +IGL   +  ++NPFPWMSE IDL KEKNFFETRVTEYQ  A
Sbjct: 279 HAAMFRDYVQYIADRRLQRIGLAIQYG-SQNPFPWMSETIDLTKEKNFFETRVTEYQSAA 337

Query: 121 ELKWD 125
            L+WD
Sbjct: 338 SLEWD 342


>gi|112489977|pdb|2ANI|A Chain A, Crystal Structure Of The F127y Mutant Of Ribonucleotide
           Reductase R2 From Chlamydia Trachomatis
          Length = 346

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/124 (57%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E QQ+   ++  A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRV EYQ  A
Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVIEYQHAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 SLTW 346


>gi|15605563|ref|NP_220349.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis D/UW-3/CX]
 gi|255311668|ref|ZP_05354238.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 6276]
 gi|255317969|ref|ZP_05359215.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 6276s]
 gi|14195107|sp|O84835|RIR2_CHLTR RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|51247460|pdb|1SYY|A Chain A, Crystal Structure Of The R2 Subunit Of Ribonucleotide
           Reductase From Chlamydia Trachomatis
 gi|3329298|gb|AAC68425.1| Ribonucleoside Reductase, Small Chain [Chlamydia trachomatis
           D/UW-3/CX]
 gi|296436383|gb|ADH18557.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/9768]
 gi|296437314|gb|ADH19484.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/11222]
 gi|296438242|gb|ADH20403.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/11074]
 gi|297140743|gb|ADH97501.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/9301]
 gi|297748957|gb|ADI51503.1| Ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis D-EC]
 gi|297749837|gb|ADI52515.1| Ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis D-LC]
          Length = 346

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/124 (57%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E QQ+   ++  A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRV EYQ  A
Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVIEYQHAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 SLTW 346


>gi|76789573|ref|YP_328659.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis A/HAR-13]
 gi|237803260|ref|YP_002888454.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis B/Jali20/OT]
 gi|237805181|ref|YP_002889335.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|255349232|ref|ZP_05381239.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 70]
 gi|255503769|ref|ZP_05382159.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 70s]
 gi|255507450|ref|ZP_05383089.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis D(s)2923]
 gi|76168103|gb|AAX51111.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis A/HAR-13]
 gi|231273481|emb|CAX10397.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|231274494|emb|CAX11290.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis B/Jali20/OT]
 gi|289525874|emb|CBJ15356.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis Sweden2]
 gi|296435459|gb|ADH17637.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis E/150]
 gi|296439176|gb|ADH21329.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis E/11023]
          Length = 346

 Score =  151 bits (382), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/124 (57%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E QQ+   ++  A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPGIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRV EYQ  A
Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVIEYQHAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 SLTW 346


>gi|189219089|ref|YP_001939730.1| ribonucleotide-diphosphate reductase subunit beta
           [Methylacidiphilum infernorum V4]
 gi|189185947|gb|ACD83132.1| Ribonucleotide reductase, beta subunit [Methylacidiphilum
           infernorum V4]
          Length = 361

 Score =  151 bits (382), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 68/124 (54%), Positives = 94/124 (75%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN I+ ENP +WT  FQ++   M+ E+  LE AYA + +P+G +GL
Sbjct: 239 LRDETIHLNFGIDLINGIREENPEIWTAGFQKEIEEMIDESVRLEYAYARDCLPRGILGL 298

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N+   + Y+++IA+RR  +IG +  +  ++NPFPWMSEV+DL KEKNFFETRVTEYQ GA
Sbjct: 299 NSALFKDYVEYIADRRLERIGFKAKYG-SKNPFPWMSEVMDLVKEKNFFETRVTEYQSGA 357

Query: 121 ELKW 124
            L W
Sbjct: 358 VLNW 361


>gi|330443801|ref|YP_004376787.1| ribonucleoside-diphosphate reductase subunit beta [Chlamydophila
           pecorum E58]
 gi|328806911|gb|AEB41084.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pecorum E58]
          Length = 346

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 68/124 (54%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +W+KE Q++   ++  A  LEI YA + +PKG +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWSKELQEEIIALIETAVGLEIDYAKDCLPKGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            +     Y++ IA+RR  +IGL+P++  ++NPFPWMSE +DL KEKNFFETRVTEYQ  A
Sbjct: 284 KSSMFIDYVRHIADRRLERIGLKPIYN-SKNPFPWMSETMDLNKEKNFFETRVTEYQTAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 SLSW 346


>gi|29840533|ref|NP_829639.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           caviae GPIC]
 gi|29834882|gb|AAP05517.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           caviae GPIC]
          Length = 346

 Score =  149 bits (376), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 67/124 (54%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +W++E Q +   ++ +A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWSQELQDEIIALIQKAVDLEIEYAKDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            +     Y++ IA+RR  +IGL+P++ Y++NPFPWMSE IDL KEKNFFETRVTEYQ   
Sbjct: 284 KSSMFIDYVRHIADRRLERIGLKPIY-YSKNPFPWMSETIDLNKEKNFFETRVTEYQTSG 342

Query: 121 ELKW 124
            L W
Sbjct: 343 NLSW 346


>gi|62185356|ref|YP_220141.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           abortus S26/3]
 gi|62148423|emb|CAH64191.1| putative ibonucleoside reductase small subunit [Chlamydophila
           abortus S26/3]
          Length = 349

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 68/124 (54%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E Q +   ++ +A  LEI YA + +P+G +GL
Sbjct: 227 LRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYARDCLPRGILGL 286

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y++ IA+RR  +IGL+P++ +++NPFPWMSE IDL KEKNFFETRV EYQ  A
Sbjct: 287 KASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFFETRVIEYQTAA 345

Query: 121 ELKW 124
            L W
Sbjct: 346 NLSW 349


>gi|313848275|emb|CBY17276.1| putative ibonucleoside reductase small subunit [Chlamydophila
           psittaci RD1]
          Length = 349

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 68/124 (54%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E Q +   ++ +A  LEI YA + +P+G +GL
Sbjct: 227 LRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYARDCLPRGILGL 286

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y++ IA+RR  +IGL+P++ +++NPFPWMSE IDL KEKNFFETRV EYQ  A
Sbjct: 287 KASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFFETRVIEYQTAA 345

Query: 121 ELKW 124
            L W
Sbjct: 346 NLSW 349


>gi|329943118|ref|ZP_08291892.1| ribonucleotide reductase, small chain family protein [Chlamydophila
           psittaci Cal10]
 gi|325507260|gb|ADZ18898.1| ribonucleotide reductase subunit beta [Chlamydophila psittaci 6BC]
 gi|328814665|gb|EGF84655.1| ribonucleotide reductase, small chain family protein [Chlamydophila
           psittaci Cal10]
 gi|328914953|gb|AEB55786.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           psittaci 6BC]
          Length = 346

 Score =  147 bits (372), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 68/124 (54%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E Q +   ++ +A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYARDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A     Y++ IA+RR  +IGL+P++ +++NPFPWMSE IDL KEKNFFETRV EYQ  A
Sbjct: 284 KASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFFETRVIEYQTAA 342

Query: 121 ELKW 124
            L W
Sbjct: 343 NLSW 346


>gi|330941350|gb|EGH44202.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 109

 Score =  147 bits (370), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 66/109 (60%), Positives = 82/109 (75%)

Query: 17  QIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRR 76
           QIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+NA   E Y++FIANRR
Sbjct: 1   QIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRR 60

Query: 77  CHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELKWD 125
             QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G  L WD
Sbjct: 61  LSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGGALSWD 109


>gi|89898045|ref|YP_515155.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           felis Fe/C-56]
 gi|89331417|dbj|BAE81010.1| ribonucleoside-diphosphate reductase beta chain [Chlamydophila
           felis Fe/C-56]
          Length = 349

 Score =  147 bits (370), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 66/124 (53%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +W+++ Q +   ++ +A  LEI YA + +P+G +GL
Sbjct: 227 LRDETIHLNFGIDLINGIKEENPEVWSQQLQDEIVDLIQKAVDLEIEYARDCLPRGILGL 286

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            +     Y++ IA+RR  +IGL+P++  ++NPFPWMSE IDL KEKNFFETRVTEYQ  A
Sbjct: 287 RSSMFIDYVRHIADRRLERIGLKPIYN-SKNPFPWMSETIDLNKEKNFFETRVTEYQTAA 345

Query: 121 ELKW 124
            L W
Sbjct: 346 NLNW 349


>gi|33242353|ref|NP_877294.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae TW-183]
 gi|33236864|gb|AAP98951.1| ribonucleoside reductase small chain [Chlamydophila pneumoniae
           TW-183]
          Length = 365

 Score =  147 bits (370), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 66/124 (53%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E Q++   ++ +A  LEI YA + +P+G +GL
Sbjct: 243 LRDETIHLNFGIDLINGIKEENPEVWTTELQEEIVALIEKAVELEIEYAKDCLPRGILGL 302

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            +     Y++ IA+RR  +IGL+P++ ++ NPFPWMSE +DL KEKNFFETRVTEYQ   
Sbjct: 303 RSSMFIDYVRHIADRRLERIGLKPIY-HSRNPFPWMSETMDLNKEKNFFETRVTEYQTAG 361

Query: 121 ELKW 124
            L W
Sbjct: 362 NLSW 365


>gi|15618893|ref|NP_225179.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae CWL029]
 gi|15836516|ref|NP_301040.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae J138]
 gi|16752043|ref|NP_445409.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae AR39]
 gi|14195165|sp|Q9Z6S4|RIR2_CHLPN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|4377313|gb|AAD19122.1| Ribonucleoside Reductase, Small Chain [Chlamydophila pneumoniae
           CWL029]
 gi|7189783|gb|AAF38660.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pneumoniae AR39]
 gi|8979358|dbj|BAA99192.1| ribonucleoside reductase, small chain [Chlamydophila pneumoniae
           J138]
 gi|269302786|gb|ACZ32886.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pneumoniae LPCoLN]
          Length = 346

 Score =  146 bits (369), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 66/124 (53%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP +WT E Q++   ++ +A  LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWTTELQEEIVALIEKAVELEIEYAKDCLPRGILGL 283

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            +     Y++ IA+RR  +IGL+P++ ++ NPFPWMSE +DL KEKNFFETRVTEYQ   
Sbjct: 284 RSSMFIDYVRHIADRRLERIGLKPIY-HSRNPFPWMSETMDLNKEKNFFETRVTEYQTAG 342

Query: 121 ELKW 124
            L W
Sbjct: 343 NLSW 346


>gi|149173739|ref|ZP_01852368.1| ribonucleotide-diphosphate reductase beta subunit [Planctomyces
           maris DSM 8797]
 gi|148847269|gb|EDL61603.1| ribonucleotide-diphosphate reductase beta subunit [Planctomyces
           maris DSM 8797]
          Length = 359

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 72/125 (57%), Positives = 86/125 (68%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP LWT EFQQ     +  A  LEI YA + +P G +GL
Sbjct: 236 LRDETIHLNFGIDLINGIKQENPDLWTPEFQQLIIDRMKYAAELEIEYAKDCLPTGILGL 295

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N     +Y+Q IA+RR  +IGL P    + NPFPWMSE +DL KEKNFFETRVTEYQ   
Sbjct: 296 NGELFREYVQHIADRRLERIGL-PAQYGSANPFPWMSETMDLSKEKNFFETRVTEYQSSG 354

Query: 121 ELKWD 125
            L WD
Sbjct: 355 SLNWD 359


>gi|269839640|ref|YP_003324332.1| ribonucleoside-diphosphate reductase [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269791370|gb|ACZ43510.1| Ribonucleoside-diphosphate reductase [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 353

 Score =  145 bits (367), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/125 (56%), Positives = 89/125 (71%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP  WT+E ++    M+ +A   EIAYA E +P G +GL
Sbjct: 230 LRDETVHLNFGIDLINTIKEENPEAWTEELRRDLVGMIRQAVEYEIAYARECLPNGVLGL 289

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    +Y+Q+IA+RR  +I L P+   + NPFPWMSE +DL KEKNFFETRVTEYQ   
Sbjct: 290 NADLFREYVQYIADRRLERIEL-PVQYRSRNPFPWMSETMDLPKEKNFFETRVTEYQNAG 348

Query: 121 ELKWD 125
            L WD
Sbjct: 349 TLVWD 353


>gi|300709535|ref|YP_003735349.1| ribonucleotide-diphosphate reductase subunit beta [Halalkalicoccus
           jeotgali B3]
 gi|299123218|gb|ADJ13557.1| ribonucleotide-diphosphate reductase subunit beta [Halalkalicoccus
           jeotgali B3]
          Length = 330

 Score =  140 bits (354), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 62/124 (50%), Positives = 87/124 (70%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLHLNFG+D+IN ++ EN  +WT  F+ +   +L EA  LE  YA E  P+  +G+
Sbjct: 208 MRDESLHLNFGVDLINTVREENSGIWTDVFEAEIEGLLREAVELERTYAREACPEEVLGM 267

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                 +Y++++A+RR  Q+G+EP++  T+NPFPWM+E +DL KEKNFFET V EYQ G 
Sbjct: 268 GPAQFAEYVEYVADRRLDQLGMEPVYD-TDNPFPWMAEQVDLNKEKNFFETNVAEYQSGG 326

Query: 121 ELKW 124
            L+W
Sbjct: 327 SLEW 330


>gi|313117005|ref|YP_004038129.1| ribonucleotide reductase, beta subunit [Halogeometricum borinquense
           DSM 11551]
 gi|312294957|gb|ADQ68993.1| ribonucleotide reductase, beta subunit [Halogeometricum borinquense
           DSM 11551]
          Length = 330

 Score =  140 bits (353), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 63/124 (50%), Positives = 85/124 (68%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLH+ FG+D+INQI+ ENP  WT EF  + R ++ +A  LE  YA E  P   +G+
Sbjct: 208 MRDESLHVGFGVDLINQIRAENPDAWTDEFGAEVRDLIEKAVDLEQIYAREACPDDVLGM 267

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +     +Y++ +A+RR  Q+ L+  +  T+NPFPWMSE +DL KEKNFFET+VTEYQ G 
Sbjct: 268 SPDQFAEYVEHVADRRLGQLDLDASYG-TDNPFPWMSEAVDLNKEKNFFETQVTEYQSGG 326

Query: 121 ELKW 124
            L W
Sbjct: 327 SLDW 330


>gi|257053403|ref|YP_003131236.1| ribonucleotide-diphosphate reductase subunit beta [Halorhabdus
           utahensis DSM 12940]
 gi|256692166|gb|ACV12503.1| Ribonucleoside-diphosphate reductase [Halorhabdus utahensis DSM
           12940]
          Length = 330

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/124 (51%), Positives = 86/124 (69%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLH+ FG+D+I+QI+ ENP +WT EF  +   ++ EA  LE  YA E  P+  +G+
Sbjct: 208 MRDESLHVGFGVDLIDQIRTENPGVWTDEFDSEVIDLIKEAVELEQIYAREACPEEILGM 267

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +      Y+++IA+RR  Q+ L   +  TENPFPWMSE +DL KEKNFFET+VTEYQ G 
Sbjct: 268 SGSQFADYVEYIADRRLDQLDLPEQYG-TENPFPWMSEQVDLNKEKNFFETQVTEYQSGG 326

Query: 121 ELKW 124
            L+W
Sbjct: 327 SLEW 330


>gi|15791173|ref|NP_280997.1| ribonucleotide-diphosphate reductase subunit beta [Halobacterium
           sp. NRC-1]
 gi|169236929|ref|YP_001690129.1| ribonucleotide-diphosphate reductase subunit beta [Halobacterium
           salinarum R1]
 gi|10581791|gb|AAG20477.1| ribonucleoside reductase small chain [Halobacterium sp. NRC-1]
 gi|167727995|emb|CAP14783.1| ribonucleoside-diphosphate reductase beta subunit [Halobacterium
           salinarum R1]
          Length = 331

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 58/125 (46%), Positives = 89/125 (71%), Gaps = 1/125 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLHLNFG+D+INQI+ E+P +WT +F+ +  +++ +A  LE  YA +  P   +G+
Sbjct: 208 MRDESLHLNFGVDLINQIRDEHPDVWTADFEAEVNSLMRDAVDLEQLYARDACPDDLLGM 267

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           ++     Y++++A+RR  Q+ ++P++  T+NPFPWM+E +DL  E NFFE  V+EYQQG 
Sbjct: 268 SSEQFADYVEYVADRRFQQLRMDPVYG-TDNPFPWMTEQVDLNTETNFFERNVSEYQQGG 326

Query: 121 ELKWD 125
            L WD
Sbjct: 327 SLDWD 331


>gi|289582310|ref|YP_003480776.1| ribonucleoside-diphosphate reductase [Natrialba magadii ATCC 43099]
 gi|289531863|gb|ADD06214.1| Ribonucleoside-diphosphate reductase [Natrialba magadii ATCC 43099]
          Length = 330

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 63/124 (50%), Positives = 86/124 (69%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDESLH+ FG+D+I+QI++ENP +WT  F  +   ++ EA  LE  YA+E  P   +G+
Sbjct: 208 MRDESLHVGFGVDLIDQIRMENPDVWTDAFGDEVVELITEAVELEKIYAYEACPDEILGM 267

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A    +Y++ IA+RR  Q+ L P    T+NPFPW+SE +DL KEKNFFET+VTEYQ G 
Sbjct: 268 SADQFAEYVEHIADRRLGQLDL-PTQYGTDNPFPWLSEQVDLNKEKNFFETQVTEYQSGG 326

Query: 121 ELKW 124
            L W
Sbjct: 327 SLDW 330


>gi|322368525|ref|ZP_08043093.1| ribonucleotide-diphosphate reductase subunit beta [Haladaptatus
           paucihalophilus DX253]
 gi|320551809|gb|EFW93455.1| ribonucleotide-diphosphate reductase subunit beta [Haladaptatus
           paucihalophilus DX253]
          Length = 330

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/124 (50%), Positives = 85/124 (68%), Gaps = 1/124 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH+ FG+D+IN+I+ ENP+ WT  F  +   ++  A  LE  YA+E  P   +G+
Sbjct: 208 LRDESLHVGFGVDLINEIRAENPNAWTDAFGDEVTDLITNAVELEKIYAYEACPDEILGM 267

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A    +Y++ IA+RR  Q+ L+  +  TENPFPWMSE +DL KEKNFFET+VTEYQ G 
Sbjct: 268 SAAQFAEYVEHIADRRLAQLDLDEQYG-TENPFPWMSEQVDLNKEKNFFETQVTEYQSGG 326

Query: 121 ELKW 124
            L W
Sbjct: 327 SLDW 330


>gi|291336894|gb|ADD96423.1| hypothetical protein [uncultured organism MedDCM-OCT-S09-C426]
          Length = 147

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 58/125 (46%), Positives = 83/125 (66%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH+NFG  +IN +K + P +WTK+F++++   + +A  LEI YAH+ +P+G +GL
Sbjct: 22  LRDESLHINFGTYLINTLKEQYPTIWTKKFEEETIEHIKKAVQLEINYAHDVLPRGILGL 81

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     YM +I NRR   IGL+  F+   NPFPW+SEV+D     NFFE +V +YQ   
Sbjct: 82  NADMFVDYMHYIGNRRLEGIGLDYRFESDTNPFPWLSEVVDTGAMTNFFERKVKDYQNSG 141

Query: 121 ELKWD 125
            L+ D
Sbjct: 142 VLEDD 146


>gi|118500933|gb|ABK97635.1| ribonucleoside diphosphate reductase beta subunit [Allochromatium
           vinosum DSM 180]
          Length = 280

 Score =  120 bits (300), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 54/81 (66%), Positives = 65/81 (80%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+H+NFGIDVINQIKIENPHLWT +F+Q+   M+ EA  LE  YAH+TMP+G +GL
Sbjct: 200 LRDESMHMNFGIDVINQIKIENPHLWTPDFRQELVGMIREAVELEARYAHDTMPRGVLGL 259

Query: 61  NAPSCEQYMQFIANRRCHQIG 81
           NA   E Y+ FIANRRC QIG
Sbjct: 260 NAQMFEDYLHFIANRRCAQIG 280


>gi|284043177|ref|YP_003393517.1| ribonucleoside-diphosphate reductase [Conexibacter woesei DSM
           14684]
 gi|283947398|gb|ADB50142.1| Ribonucleoside-diphosphate reductase [Conexibacter woesei DSM
           14684]
          Length = 364

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 81/122 (66%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H+     ++ ++  ENP +WT EF+ + R ++ EA  LE  +  + +P   VGL
Sbjct: 235 LRDESNHIELFRRLLRELVAENPEIWTAEFRDELRELMREAVALEQRFIDDCLPVEGVGL 294

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY+ +IA+RR   +GLEPL    ENP PW++E++D++KE+NFFE RVTEYQ+ +
Sbjct: 295 NADEFAQYIDYIADRRLEGVGLEPLKPGVENPLPWLAELMDVRKEQNFFEGRVTEYQKAS 354

Query: 121 EL 122
            L
Sbjct: 355 AL 356


>gi|153875510|ref|ZP_02003277.1| ribonucleotide-diphosphate reductase beta subunit [Beggiatoa sp.
           PS]
 gi|152068026|gb|EDN66723.1| ribonucleotide-diphosphate reductase beta subunit [Beggiatoa sp.
           PS]
          Length = 374

 Score =  114 bits (286), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/125 (45%), Positives = 81/125 (64%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVGL 60
           RDE+LH + G+ +I QI  EN  LW    Q++SR ++ EA  LE  YAH +MP+ G VGL
Sbjct: 251 RDENLHSSNGLWLIKQIIQENHELWDSTMQERSRAIVSEAVKLETDYAHASMPEGGIVGL 310

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
              +  ++  F+A+  C  +G++PLF+  E+P PW+SE  +L  E NFFE RV EYQ G+
Sbjct: 311 PVKTYIKFSHFVADNICKNLGIKPLFRVREHPMPWISEY-ELNHEVNFFEGRVREYQTGS 369

Query: 121 ELKWD 125
           +L WD
Sbjct: 370 QLTWD 374


>gi|294055010|ref|YP_003548668.1| Ribonucleoside-diphosphate reductase [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614343|gb|ADE54498.1| Ribonucleoside-diphosphate reductase [Coraliomargarita akajimensis
           DSM 45221]
          Length = 360

 Score =  114 bits (284), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 53/122 (43%), Positives = 81/122 (66%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H+    ++I  +  EN  +WT EF+++ R ++ EA  LE  +  + +P   VGL
Sbjct: 231 LRDESNHIEVFRNLIMDLIEENEDVWTPEFREELRDLMREAVTLEKDFIRDCLPVNSVGL 290

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A    QY+ +IA+RR   +GL PL    +NPFPW++E++D+KKE+NFFE RVTEYQ+ +
Sbjct: 291 SADEFCQYIDYIADRRLEGVGLAPLSPGVDNPFPWLAEMMDIKKEQNFFEGRVTEYQKAS 350

Query: 121 EL 122
            L
Sbjct: 351 AL 352


>gi|254442775|ref|ZP_05056251.1| ribonucleoside-diphosphate reductase, beta subunit
           [Verrucomicrobiae bacterium DG1235]
 gi|198257083|gb|EDY81391.1| ribonucleoside-diphosphate reductase, beta subunit
           [Verrucomicrobiae bacterium DG1235]
          Length = 361

 Score =  106 bits (265), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 76/123 (61%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H+    ++   +  ENP +WT EF+ + R  + EA  LE  +  + +P   +GL
Sbjct: 232 LRDESNHIELLRNLFMDLIEENPDVWTPEFKAELRDAMSEAIALEKEFIADCLPVDSIGL 291

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                 QY+ +IA+RR    GL+PL     NP PW++E++D+KKE+NFFE RVTEYQ+ +
Sbjct: 292 RKEDFVQYIDYIADRRLEGCGLDPLTPGVTNPLPWLAEMMDIKKEQNFFEGRVTEYQKAS 351

Query: 121 ELK 123
            L+
Sbjct: 352 SLE 354


>gi|88856487|ref|ZP_01131145.1| ribonucleotide-diphosphate reductase beta subunit [marine
           actinobacterium PHSC20C1]
 gi|88814354|gb|EAR24218.1| ribonucleotide-diphosphate reductase beta subunit [marine
           actinobacterium PHSC20C1]
          Length = 332

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 77/120 (64%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FGI++I  +  ENP + T+EF  + R M+ +A  +E AY H+ +P G +GL
Sbjct: 205 VRDESLHLKFGINLILTVLEENPEIQTEEFADEIRQMILDAVEMEEAYNHDLLPGGILGL 264

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY++++A+RR  ++G EP +K T NP  WM+   D  +  NFFE+  T Y+  A
Sbjct: 265 NANYINQYVKYLADRRLEELGFEPHYKVT-NPAKWMATANDTLELVNFFESTNTSYEANA 323


>gi|196233679|ref|ZP_03132520.1| Ribonucleoside-diphosphate reductase [Chthoniobacter flavus
           Ellin428]
 gi|196222349|gb|EDY16878.1| Ribonucleoside-diphosphate reductase [Chthoniobacter flavus
           Ellin428]
          Length = 390

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 71/123 (57%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H+  G  ++ Q+  ENP +WT EF+ +    + E   LE  +  + +P+  VG+
Sbjct: 260 LRDESNHIELGRYILTQLIAENPDIWTPEFRAELVEFMREGVELEKEFVRDCLPEDGVGM 319

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                  Y+++ A+RR   + L  L     NPF W+ EVI L+KEKNFFETRVTEYQ   
Sbjct: 320 TQADFLTYVEYNADRRLAGLDLPALSGVKTNPFAWLDEVIFLRKEKNFFETRVTEYQTSG 379

Query: 121 ELK 123
            LK
Sbjct: 380 SLK 382


>gi|241589542|ref|YP_002979567.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
 gi|240868254|gb|ACS65913.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
          Length = 328

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/77 (58%), Positives = 58/77 (75%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA +TMP+G +GL
Sbjct: 233 LRDESLHCNFGIDLINQIKLENPHLWTAEFKVEITELFKQAVDLEYRYAEDTMPRGVLGL 292

Query: 61  NAPSCEQYMQFIANRRC 77
           NA   + Y++FI NRRC
Sbjct: 293 NASMFKGYLRFICNRRC 309


>gi|171913278|ref|ZP_02928748.1| ribonucleotide-diphosphate reductase subunit beta [Verrucomicrobium
           spinosum DSM 4136]
          Length = 361

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 74/122 (60%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H+    ++   +  ENP +WT EF+++   ++ EA  LE  +  + +P   VGL
Sbjct: 232 LRDESNHIKVFRNLFMDLIDENPEIWTPEFREELVELMKEAVALEKEFIRDCLPVAAVGL 291

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            A   E Y+ FIA+RR   +GL  L     NP PW++E+ D++KE+NFFE  VT+YQ+ +
Sbjct: 292 TAGEFELYIDFIADRRLASVGLPALTPGIVNPLPWLAEMQDIRKEQNFFEGTVTDYQKAS 351

Query: 121 EL 122
            L
Sbjct: 352 SL 353


>gi|225164890|ref|ZP_03727109.1| Ribonucleoside-diphosphate reductase [Opitutaceae bacterium TAV2]
 gi|224800504|gb|EEG18881.1| Ribonucleoside-diphosphate reductase [Opitutaceae bacterium TAV2]
          Length = 362

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 1/123 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES H+    +++  +  ENP +WT  F+++ R  + EA  LE  +  + +P   VGL
Sbjct: 232 LRDESNHIEVFRNLLMDLVEENPEIWTPGFKEELRETMREAVTLEKEFIRDCLPVNAVGL 291

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                  Y+ +IA+RR   +GL P+     +NP PW++E++D+KKE+NFFE RVTEYQ+ 
Sbjct: 292 AVDEFLTYIDYIADRRLEGVGLAPISATPIKNPLPWLAEMMDIKKEQNFFEGRVTEYQKA 351

Query: 120 AEL 122
           + L
Sbjct: 352 SSL 354


>gi|117928932|ref|YP_873483.1| ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
           11B]
 gi|117649395|gb|ABK53497.1| Ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
           11B]
          Length = 348

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 79/126 (62%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DVI+ ++ E P L+  E  +++R ML EA   E  +A + + +G  G++
Sbjct: 222 RDESMHMAFAFDVIDTVRREEPELFDDELARQAREMLAEAVDCETQFAEDLLGQGVPGMS 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
                 Y++ +A+RRC Q+GLEP++  + NPF +M E+ D+++  NFFE RV  YQ G  
Sbjct: 282 LADMRSYLEHVADRRCVQLGLEPIYG-SPNPFTFM-ELQDVQELSNFFERRVAAYQIGVS 339

Query: 120 AELKWD 125
            E+ +D
Sbjct: 340 GEVAFD 345


>gi|330467634|ref|YP_004405377.1| ribonucleoside-diphosphate reductase [Verrucosispora maris
           AB-18-032]
 gi|328810605|gb|AEB44777.1| Ribonucleoside-diphosphate reductase [Verrucosispora maris
           AB-18-032]
          Length = 342

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 74/118 (62%), Gaps = 2/118 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DV++ ++ E P L+  E +Q+ R ML EA   E+ +A + + +G  G+ 
Sbjct: 216 RDESMHMAFAFDVVDTVRAEEPDLFDAEMEQQVRDMLAEAVDCEVQFAADLLEQGVSGMP 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY+Q +A+RR   +G+ P++  T NPF +M E+ D+++  NFFE RV+ YQ G
Sbjct: 276 LADMRQYLQHVADRRLAMLGIAPMYGST-NPFAFM-ELQDVQELSNFFERRVSAYQVG 331


>gi|149375674|ref|ZP_01893443.1| Ribonucleotide reductase, beta subunit [Marinobacter algicola
           DG893]
 gi|149360076|gb|EDM48531.1| Ribonucleotide reductase, beta subunit [Marinobacter algicola
           DG893]
          Length = 352

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/125 (43%), Positives = 75/125 (60%), Gaps = 5/125 (4%)

Query: 1   MRDESLHLNFGIDVINQI-KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           +RDE++H +FG+ V+NQI + EN  L  K      R M  E+   E AYA+  +    +G
Sbjct: 232 LRDEAMHFSFGLKVVNQILEEENITLDPKAV----RDMWDESEAAETAYANYILRDPILG 287

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
            +A    +  +F+ANRR   +GLE  F   +N  PW+ E   L+KEKNFFETRV EYQ G
Sbjct: 288 YSAQYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFFETRVIEYQTG 347

Query: 120 AELKW 124
           A+L+W
Sbjct: 348 AQLEW 352


>gi|238061574|ref|ZP_04606283.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
           39149]
 gi|237883385|gb|EEP72213.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
           39149]
          Length = 344

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 74/119 (62%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DV++ ++ E P L+  E  ++ R ML EA   E  +A + + +G  GL+
Sbjct: 218 RDESMHMAFAFDVVDTVRHEEPDLFDDELARQVREMLAEAVECEAQFAEDLLEQGVSGLS 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY+Q +A+RR  Q+G+ PL+  + NPF +M E+ D+++  NFFE RV+ YQ G 
Sbjct: 278 LDDMRQYLQHVADRRLAQLGIAPLYG-SANPFAFM-ELQDVQELSNFFERRVSAYQVGV 334


>gi|120556760|ref|YP_961111.1| ribonucleoside-diphosphate reductase [Marinobacter aquaeolei VT8]
 gi|120326609|gb|ABM20924.1| Ribonucleoside-diphosphate reductase [Marinobacter aquaeolei VT8]
          Length = 352

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 3/124 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++H +FG+ V+NQI  E          +  R M  E+   E+AYA+  +    +G 
Sbjct: 232 LRDEAMHFSFGLKVVNQILEEEKITLDP---KAVREMWDESEAAEMAYANYVLRDPILGY 288

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A    +  +F+ANRR   +GLE  F   +N  PW+ E   L+KEKNFFETRV EYQ GA
Sbjct: 289 SAEYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFFETRVIEYQTGA 348

Query: 121 ELKW 124
           +L+W
Sbjct: 349 QLEW 352


>gi|311696539|gb|ADP99412.1| ribonucleotide-diphosphate reductase beta subunit [marine bacterium
           HP15]
          Length = 352

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 53/125 (42%), Positives = 76/125 (60%), Gaps = 5/125 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKS-RTMLHEATLLEIAYAHETMPKGFVG 59
           +RDE++H +FG+ V+NQI +E  ++    F  K+ R M  E+   E AYA   +    +G
Sbjct: 232 LRDEAMHFSFGLKVVNQI-VEEENI---TFDPKAVREMWDESEAAEKAYADYILRDPILG 287

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
            +A    +  +F+ANRR   +GLE  F   +N  PW+ E   L+KEKNFFETRV EYQ G
Sbjct: 288 YSAEYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFFETRVIEYQTG 347

Query: 120 AELKW 124
           A+L+W
Sbjct: 348 AQLEW 352


>gi|94986920|ref|YP_594853.1| ribonucleotide reductase, beta subunit [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731169|emb|CAJ54531.1| Ribonucleotide reductase, beta subunit [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 333

 Score = 96.7 bits (239), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 57/126 (45%), Positives = 73/126 (57%), Gaps = 5/126 (3%)

Query: 1   MRDESLHLNFGIDVINQ-IKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           +RDE LH  FGI VI   I+ EN  L     +Q    +  E    EIAYA+  + +  +G
Sbjct: 212 LRDEVLHCTFGITVIKGLIEEENITLDPTAVRQ----LWDEVEAAEIAYANYILHEPIIG 267

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
            NA       +FIANRR  Q+G++  F   +N  PW+ E  +L+KEKNFFETRVTEYQ G
Sbjct: 268 YNADLHIGQFRFIANRRSRQLGMKEPFPGAKNVLPWLDEQSNLRKEKNFFETRVTEYQTG 327

Query: 120 AELKWD 125
             LKWD
Sbjct: 328 GGLKWD 333


>gi|148273612|ref|YP_001223173.1| ribonucleotide-diphosphate reductase subunit beta [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|170782700|ref|YP_001711034.1| ribonucleotide-diphosphate reductase subunit beta [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|147831542|emb|CAN02508.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
 gi|169157270|emb|CAQ02455.1| ribonucleoside-diphosphate reductase beta subunit [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 331

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 74/120 (61%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FGI++I  +  ENP L T+EF  + + M+ +A  +E  Y  + +P G +GL
Sbjct: 206 VRDESLHLKFGINLILTVLEENPDLQTEEFAAEIKQMILDAVEMEEQYNRDLLPNGILGL 265

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY++++A+RR  ++G E  +K + NP  WM+   D  +  NFFE+  T Y+  A
Sbjct: 266 NANYINQYVKYLADRRLEELGFEAEYKVS-NPAKWMATANDTLQLVNFFESTNTSYESNA 324


>gi|311743885|ref|ZP_07717691.1| ribonucleotide-diphosphate reductase beta subunit [Aeromicrobium
           marinum DSM 15272]
 gi|311313015|gb|EFQ82926.1| ribonucleotide-diphosphate reductase beta subunit [Aeromicrobium
           marinum DSM 15272]
          Length = 357

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 74/122 (60%), Gaps = 1/122 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FGI++I  +  ENP + T EF  + + M+ +A  +E AY  + +P G +GL
Sbjct: 236 VRDESLHLKFGINLILTVLEENPEVATAEFAAEIQQMVLDAVEMEEAYNRDLLPGGILGL 295

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY++++A+RR  ++G  P +  T NP  WM+   D  +  NFFE   T Y+  A
Sbjct: 296 NADYINQYVRYLADRRLEELGFGPHYGAT-NPAKWMATANDTLQLVNFFEATNTSYEVNA 354

Query: 121 EL 122
           +L
Sbjct: 355 KL 356


>gi|83649535|ref|YP_437970.1| ribonucleotide reductase subunit beta [Hahella chejuensis KCTC
           2396]
 gi|83637578|gb|ABC33545.1| Ribonucleotide reductase, beta subunit [Hahella chejuensis KCTC
           2396]
          Length = 405

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/125 (44%), Positives = 70/125 (56%), Gaps = 5/125 (4%)

Query: 1   MRDESLHLNFGIDVINQI-KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           MRDE +H  FGI V+ QI K E   L  K      +T+  EA   E  YAH  + +  +G
Sbjct: 285 MRDEVMHCAFGIRVVKQIIKEEGVTLDPKAI----KTLWEEAEAAETGYAHFLLKEPILG 340

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
             A    +  +FIANRR  Q+ L+  F    N  PW+ E   ++KEKNFFETRVTEYQ G
Sbjct: 341 YTAEDHIEQFRFIANRRAKQLKLDEPFPGAGNALPWLDEQASMRKEKNFFETRVTEYQTG 400

Query: 120 AELKW 124
           A L+W
Sbjct: 401 ASLQW 405


>gi|330949820|gb|EGH50080.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae Cit 7]
          Length = 359

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 54/69 (78%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKKEATQMILQGTQLEIEYARDTMPRGVLGM 350

Query: 61  NAPSCEQYM 69
           NA   E Y+
Sbjct: 351 NAAMMEDYL 359


>gi|28493649|ref|NP_787810.1| ribonucleotide-diphosphate reductase subunit beta [Tropheryma
           whipplei str. Twist]
 gi|28572842|ref|NP_789622.1| ribonucleotide-diphosphate reductase subunit beta [Tropheryma
           whipplei TW08/27]
 gi|28410975|emb|CAD67360.1| ribonucleotide-diphosphate reductase small chain [Tropheryma
           whipplei TW08/27]
 gi|28476691|gb|AAO44779.1| ribonucleotide reductase beta chain [Tropheryma whipplei str.
           Twist]
          Length = 327

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/120 (39%), Positives = 71/120 (59%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FGI++I  +  ENP L T +F  + R M+     +E  Y H+ +P G +GL
Sbjct: 205 VRDESLHLKFGINLILTVLEENPDLQTSDFADEIRGMIIAGVEMEEEYNHDLLPNGILGL 264

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N+    QY++++A+RR  ++G +P +  T NP  WM+   D  +  NFFE   T Y+  A
Sbjct: 265 NSGYINQYVKYLADRRLEELGFDPEYNVT-NPAKWMATANDTFELVNFFEAINTSYESNA 323


>gi|330949821|gb|EGH50081.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae Cit 7]
          Length = 65

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/65 (64%), Positives = 48/65 (73%)

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N    E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 1   NGAGMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 60

Query: 121 ELKWD 125
            L WD
Sbjct: 61  ALSWD 65


>gi|50955339|ref|YP_062627.1| ribonucleotide-diphosphate reductase subunit beta [Leifsonia xyli
           subsp. xyli str. CTCB07]
 gi|50951821|gb|AAT89522.1| ribonucleoside-diphosphate reductase, beta chain [Leifsonia xyli
           subsp. xyli str. CTCB07]
          Length = 329

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 74/121 (61%), Gaps = 1/121 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FGI++I  +  ENP L T EF  + + M+ +A  +E  Y  + +P G +GL
Sbjct: 205 VRDESLHLKFGINLILTVLEENPDLQTPEFAAEIKQMILDAVEMEEQYNRDLLPGGILGL 264

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY++++A+RR  ++G E  +K + NP  WM+   D  +  NFFE+  T Y+  A
Sbjct: 265 NANYINQYVKYLADRRLEELGFEAEYKVS-NPAKWMATANDTLELVNFFESTNTSYESNA 323

Query: 121 E 121
           +
Sbjct: 324 K 324


>gi|90023100|ref|YP_528927.1| amino acid adenylation [Saccharophagus degradans 2-40]
 gi|89952700|gb|ABD82715.1| Class Ia ribonucleoside-diphosphate reductase beta subunit
           [Saccharophagus degradans 2-40]
          Length = 368

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/125 (43%), Positives = 72/125 (57%), Gaps = 4/125 (3%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDE++H  FGI  ++QI IEN    T       +TM  EA   E  YA   + +  +G 
Sbjct: 248 MRDETMHCAFGIQTVSQIIIENC---TNIDVDAIKTMWEEADEAEANYARYILREPILGY 304

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A    +  +FIANRR  Q+GLE  F   +   PW+ E  +++KEKNFFETRV EYQ G 
Sbjct: 305 SANDHIEQFRFIANRRARQLGLEEPFPQAKCALPWLDEQANIRKEKNFFETRVIEYQAGG 364

Query: 121 ELKWD 125
            L+WD
Sbjct: 365 -LEWD 368


>gi|254492407|ref|ZP_05105579.1| ribonucleoside-diphosphate reductase, beta subunit [Methylophaga
           thiooxidans DMS010]
 gi|224462299|gb|EEF78576.1| ribonucleoside-diphosphate reductase, beta subunit [Methylophaga
           thiooxydans DMS010]
          Length = 383

 Score = 94.0 bits (232), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 55/126 (43%), Positives = 69/126 (54%), Gaps = 5/126 (3%)

Query: 1   MRDESLHLNFGIDVINQI-KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           MRDE +H +FGI V  QI K EN  L  K+ QQ    M  EA   E  YA   +    +G
Sbjct: 262 MRDEVMHASFGIRVCKQIMKEENITLDPKKVQQ----MFEEADAAEETYAGYILRDPILG 317

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
            +        ++ ANRR  Q+G E  F   E   PW+ E  +++KEKNFFET+VTEYQ G
Sbjct: 318 YSKEVHHGQFRYTANRRAKQLGFEEPFPGAEATLPWLDEQANMRKEKNFFETKVTEYQTG 377

Query: 120 AELKWD 125
             LKWD
Sbjct: 378 GGLKWD 383


>gi|256391238|ref|YP_003112802.1| ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
           44928]
 gi|256357464|gb|ACU70961.1| Ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
           44928]
          Length = 331

 Score = 93.6 bits (231), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 4/126 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DV++ ++ E P L+ ++  Q+ R ML EA   E  +A + +  G  GL 
Sbjct: 205 RDESMHMAFAFDVVDTVRAEEPDLFDEKMAQQVREMLAEAVECETQFAGDLLGGGVSGLP 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ--QG 119
                 Y++ +A+RR  Q+GLEP++  T NP  +M E+ D+++  NFFE RV+ YQ   G
Sbjct: 265 VADMRAYLEHVADRRLEQLGLEPMYG-TANPLGFM-ELQDVQELSNFFERRVSAYQVAVG 322

Query: 120 AELKWD 125
             + +D
Sbjct: 323 GSVSFD 328


>gi|145596896|ref|YP_001161193.1| ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
 gi|145306233|gb|ABP56815.1| Ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
          Length = 350

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 75/118 (63%), Gaps = 2/118 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DV++ ++ E P L+  + +++ + M+ EA   E+ +A + + +G  GL+
Sbjct: 224 RDESMHMAFAFDVVDTVRAEEPDLFDADLERQVKEMVAEAVDCEVQFAEDLLEQGVSGLS 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                +Y+Q +A+RR   +G+ P++  + NPF +M E+ D+++  NFFE RV+ YQ G
Sbjct: 284 LADMREYLQHVADRRLVTLGIAPMYG-SANPFAFM-ELQDVQELSNFFERRVSAYQMG 339


>gi|302867100|ref|YP_003835737.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
 gi|315506490|ref|YP_004085377.1| ribonucleotide reductase [Micromonospora sp. L5]
 gi|302569959|gb|ADL46161.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
 gi|315413109|gb|ADU11226.1| ribonucleotide reductase [Micromonospora sp. L5]
          Length = 342

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 75/118 (63%), Gaps = 2/118 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DV+  ++ E P L+  E +++ + ML EA   E+++A + + +G  G++
Sbjct: 216 RDESMHMAFAFDVVETVRAEEPDLFDDEMERQVKEMLAEAVECEVSFAEDLLGQGVPGMS 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                +Y+Q +A+RR   +G+ P++  + NPF +M E+ D+++  NFFE RV+ YQ G
Sbjct: 276 LADMREYLQHVADRRLAVLGIAPMYG-SGNPFAFM-ELQDVQELSNFFERRVSAYQVG 331


>gi|87311395|ref|ZP_01093515.1| ribonucleotide-diphosphate reductase beta subunit [Blastopirellula
           marina DSM 3645]
 gi|87285807|gb|EAQ77721.1| ribonucleotide-diphosphate reductase beta subunit [Blastopirellula
           marina DSM 3645]
          Length = 313

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 57/82 (69%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE++HLNFGID+IN IK ENP LWT EFQ +   ++ +A  LEI YA + +P G +GL
Sbjct: 229 LRDETVHLNFGIDLINGIKAENPDLWTAEFQAEIIDLIKQAVELEIEYAGDCLPNGILGL 288

Query: 61  NAPSCEQYMQFIANRRCHQIGL 82
           N      Y+ ++A+RR  +IGL
Sbjct: 289 NRDLFRDYVHYVADRRVERIGL 310


>gi|159040364|ref|YP_001539617.1| ribonucleoside-diphosphate reductase [Salinispora arenicola
           CNS-205]
 gi|157919199|gb|ABW00627.1| Ribonucleoside-diphosphate reductase [Salinispora arenicola
           CNS-205]
          Length = 350

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 75/118 (63%), Gaps = 2/118 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  DV++ I+ E P L+  + +++ + M+ EA   E  +A + + +G  GL+
Sbjct: 224 RDESMHMAFAFDVVDTIRAEEPDLFDADLERQIKDMVTEAVDCEAQFAEDLLEQGVSGLS 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                +Y+Q +A+RR   +G+ P++  ++NPF +M E+ D+++  NFFE RV+ YQ G
Sbjct: 284 LADMREYLQHVADRRLVTLGIAPIYG-SQNPFAFM-ELQDVQELSNFFERRVSAYQVG 339


>gi|168702494|ref|ZP_02734771.1| ribonucleoside-diphosphate reductase, beta subunit [Gemmata
           obscuriglobus UQM 2246]
          Length = 332

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 2/118 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F   VI+ ++ E P L+  E + +   ML EA   E A+A + + +G  GL+
Sbjct: 206 RDESAHMAFAFRVIDTVRREEPDLFDAELEAQIVAMLREAVECETAFARDVLGQGVAGLS 265

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 Y++++A+RR   +G+ P+F   +NPF +M ++ D+++  NFFE RV+ YQ G
Sbjct: 266 LADLRSYLEYVADRRLESLGIAPVFG-AKNPFGFM-DLQDVQELTNFFERRVSAYQLG 321


>gi|167948644|ref|ZP_02535718.1| Ribonucleotide reductase, beta subunit [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 124

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 64/125 (51%), Gaps = 3/125 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDE LH +FGI V  QI +E          Q  R M  E    E AYA   +    +G 
Sbjct: 3   MRDEVLHASFGIRVAKQIMLEEN---IAPDPQAIREMWDECEAAEDAYAGYILRDPILGY 59

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +        +++ANRR  QIGL   +   E   PW+ E  +L+KEKNFFET VTEYQ G 
Sbjct: 60  SKDDHMGQFRYVANRRARQIGLSEPYPGAEATLPWLDEQANLRKEKNFFETTVTEYQTGG 119

Query: 121 ELKWD 125
            L WD
Sbjct: 120 ALNWD 124


>gi|326403282|ref|YP_004283363.1| ribonucleoside-diphosphate reductase beta subunit [Acidiphilium
           multivorum AIU301]
 gi|325050143|dbj|BAJ80481.1| ribonucleoside-diphosphate reductase beta subunit [Acidiphilium
           multivorum AIU301]
          Length = 338

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 10/131 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK-----SRTMLHEATLLEIAYAHETMPK 55
           +RDESLH N  I +      ENP +WT+E +++     +  + HE   +++A+    +  
Sbjct: 208 VRDESLHCNSVIKLFRTFVAENPEIWTEELRREIYLCCATIVDHEDAFIDLAFEFGAVE- 266

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL A   ++Y+++IA+RR  Q+GL PLF   +NP PW+ E+++  +  NFFE R TE
Sbjct: 267 ---GLTAEEVKRYIRYIADRRLLQLGLNPLFHVDKNPLPWLDEMLNAVEHTNFFENRATE 323

Query: 116 YQQGAEL-KWD 125
           Y + +    WD
Sbjct: 324 YSKASTAGSWD 334


>gi|58584525|ref|YP_198098.1| ribonucleotide-diphosphate reductase subunit beta [Wolbachia
           endosymbiont strain TRS of Brugia malayi]
 gi|58418841|gb|AAW70856.1| Ribonucleotide reductase, beta subunit [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
          Length = 331

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 68/120 (56%), Gaps = 1/120 (0%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           RDE+LH N  I++ N    EN  +W  EF++   +       LE  +       G V GL
Sbjct: 193 RDETLHTNSIINLFNTFIKENNEIWNDEFKEGLYSACRTIVGLEDEFIKLAFDLGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y+++IANRR  Q+GL+P++   +NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SAEEVRNYIRYIANRRLMQLGLKPIYDINDNPLPWLDEILNGVEHTNFFENRVTEYSRAA 312


>gi|148259750|ref|YP_001233877.1| ribonucleotide-diphosphate reductase subunit beta [Acidiphilium
           cryptum JF-5]
 gi|146401431|gb|ABQ29958.1| Ribonucleoside-diphosphate reductase [Acidiphilium cryptum JF-5]
          Length = 338

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 10/131 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK-----SRTMLHEATLLEIAYAHETMPK 55
           +RDESLH N  I +      ENP +WT+E +++     +  + HE   +++A+    +  
Sbjct: 208 VRDESLHCNSVIKLFRTFVAENPEIWTEELRREIYLCCATIVDHEDAFIDLAFEFGAVE- 266

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL A   ++Y+++IA+RR  Q+GL PLF   +NP PW+ E+++  +  NFFE R TE
Sbjct: 267 ---GLTAEEVKRYIRYIADRRLLQLGLNPLFHVDKNPLPWLDEMLNAVEHTNFFENRATE 323

Query: 116 YQQGAEL-KWD 125
           Y + +    WD
Sbjct: 324 YSKASTAGSWD 334


>gi|225873704|ref|YP_002755163.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium
           capsulatum ATCC 51196]
 gi|225791613|gb|ACO31703.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium
           capsulatum ATCC 51196]
          Length = 340

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES HL F  +V+N ++ + P LW  + +     MLHEA   E  +A + +  G  GL+
Sbjct: 214 RDESCHLEFAFEVVNVVRSQEPDLWDAQLEADIVEMLHEAVDAETQFAEDLLSGGVAGLS 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY+ ++A+ R  ++G+ P F   +NPF +M E+ D+++  NFFE RV+ YQ   
Sbjct: 274 VRDMRQYLGYVADSRLQRLGIAPAFG-VKNPFSFM-ELQDVQELTNFFERRVSAYQTAV 330


>gi|297157411|gb|ADI07123.1| ribonucleoside-diphosphate reductase [Streptomyces bingchenggensis
           BCW-1]
          Length = 340

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 74/120 (61%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF   V++ ++ E P L+  E QQ+   ML EA   E+ +A +   +G  G+N
Sbjct: 214 RDETMHMNFAFQVVDTVREEEPELFDDELQQQVTDMLREAVEAELQFARDLCGEGLPGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+ ++++  NFFE R + YQ   E
Sbjct: 274 TESMRQYLECVADQRLARLGFAPVYG-SENPFSFM-ELQNVQELTNFFERRASAYQVAVE 331


>gi|289425969|ref|ZP_06427716.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK187]
 gi|289153512|gb|EFD02226.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK187]
 gi|313763766|gb|EFS35130.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL013PA1]
 gi|313802998|gb|EFS44206.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA2]
 gi|313816916|gb|EFS54630.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL059PA1]
 gi|313829718|gb|EFS67432.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL063PA2]
 gi|313839374|gb|EFS77088.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL086PA1]
 gi|314916474|gb|EFS80305.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA4]
 gi|314932316|gb|EFS96147.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL067PA1]
 gi|314956590|gb|EFT00842.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL027PA1]
 gi|314959472|gb|EFT03574.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA1]
 gi|314964864|gb|EFT08964.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL082PA1]
 gi|314968630|gb|EFT12728.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA1]
 gi|315079174|gb|EFT51177.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL053PA2]
 gi|315100241|gb|EFT72217.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL059PA2]
 gi|315102565|gb|EFT74541.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL046PA1]
 gi|315109517|gb|EFT81493.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL030PA2]
 gi|327455890|gb|EGF02545.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA3]
 gi|327458042|gb|EGF04697.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL083PA2]
 gi|328757204|gb|EGF70820.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA1]
 gi|328757585|gb|EGF71201.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL025PA2]
          Length = 328

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G +G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   T Y+  A
Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYR-VANPAKWMATANDTLQVVNFFEATNTSYEVNA 322


>gi|314918862|gb|EFS82693.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA1]
 gi|314921071|gb|EFS84902.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA3]
          Length = 328

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G +G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   T Y+  A
Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYR-VANPAKWMATANDTLQVVNFFEATNTSYEVNA 322


>gi|50843560|ref|YP_056787.1| ribonucleotide-diphosphate reductase subunit beta
           [Propionibacterium acnes KPA171202]
 gi|282854887|ref|ZP_06264221.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J139]
 gi|289427904|ref|ZP_06429608.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J165]
 gi|295131638|ref|YP_003582301.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK137]
 gi|50841162|gb|AAT83829.1| ribonucleoside-diphosphate reductase beta chain [Propionibacterium
           acnes KPA171202]
 gi|282582033|gb|EFB87416.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J139]
 gi|289158787|gb|EFD06987.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J165]
 gi|291376691|gb|ADE00546.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK137]
 gi|313771782|gb|EFS37748.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL074PA1]
 gi|313808408|gb|EFS46875.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA2]
 gi|313810605|gb|EFS48319.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL083PA1]
 gi|313813765|gb|EFS51479.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL025PA1]
 gi|313818171|gb|EFS55885.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL046PA2]
 gi|313821029|gb|EFS58743.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA1]
 gi|313823899|gb|EFS61613.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA2]
 gi|313827161|gb|EFS64875.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL063PA1]
 gi|313831646|gb|EFS69360.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL007PA1]
 gi|313834800|gb|EFS72514.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL056PA1]
 gi|314924366|gb|EFS88197.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL001PA1]
 gi|314927054|gb|EFS90885.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA3]
 gi|314961874|gb|EFT05975.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA2]
 gi|314965892|gb|EFT09991.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL082PA2]
 gi|314974996|gb|EFT19091.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL053PA1]
 gi|314977908|gb|EFT22002.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL045PA1]
 gi|314979603|gb|EFT23697.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL072PA2]
 gi|314981613|gb|EFT25706.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA3]
 gi|314984684|gb|EFT28776.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA1]
 gi|314988338|gb|EFT32429.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA2]
 gi|314990428|gb|EFT34519.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA3]
 gi|315082361|gb|EFT54337.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL078PA1]
 gi|315083809|gb|EFT55785.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL027PA2]
 gi|315087306|gb|EFT59282.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA3]
 gi|315089724|gb|EFT61700.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL072PA1]
 gi|315092253|gb|EFT64229.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA4]
 gi|315094826|gb|EFT66802.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL060PA1]
 gi|315095599|gb|EFT67575.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL038PA1]
 gi|315104692|gb|EFT76668.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA2]
 gi|315107754|gb|EFT79730.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL030PA1]
 gi|327326613|gb|EGE68401.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL096PA3]
 gi|327332877|gb|EGE74609.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL096PA2]
 gi|327335278|gb|EGE76988.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL097PA1]
 gi|327447704|gb|EGE94358.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL043PA2]
 gi|327448579|gb|EGE95233.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL043PA1]
 gi|327449568|gb|EGE96222.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL013PA2]
 gi|328757395|gb|EGF71011.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL020PA1]
 gi|328762002|gb|EGF75508.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL099PA1]
          Length = 328

 Score = 90.1 bits (222), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G +G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   T Y+  A
Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYRVV-NPAKWMATANDTLQVVNFFEATNTSYEVNA 322


>gi|327328671|gb|EGE70431.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL103PA1]
          Length = 328

 Score = 90.1 bits (222), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G +G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   T Y+  A
Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYRIV-NPAKWMATANDTLQVVNFFEATNTSYEVNA 322


>gi|88607783|ref|YP_505152.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           phagocytophilum HZ]
 gi|88598846|gb|ABD44316.1| ribonucleoside-diphosphate reductase, beta subunit [Anaplasma
           phagocytophilum HZ]
          Length = 323

 Score = 89.4 bits (220), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/120 (38%), Positives = 68/120 (56%), Gaps = 1/120 (0%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           RDESLH +  I + N    EN  +W  + +Q+         +LE  +       G V GL
Sbjct: 193 RDESLHTDSIIRLFNTFVHENGEIWDDDLKQELYDACKVIVMLEDEFIDLAFALGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A   ++Y++FIANRR  Q+ LEP++   ENP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SACEVKRYIRFIANRRLKQLHLEPIYDVAENPLPWLDEILNGVEHTNFFENRVTEYARAA 312


>gi|313793687|gb|EFS41718.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA1]
 gi|327456018|gb|EGF02673.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL092PA1]
          Length = 328

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 69/120 (57%), Gaps = 1/120 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G  G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGIRGM 263

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   T Y+  A
Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEYR-VANPAKWMATANDTLQVVNFFEATNTSYEVNA 322


>gi|221633388|ref|YP_002522613.1| ribonucleotide-diphosphate reductase subunit beta [Thermomicrobium
           roseum DSM 5159]
 gi|221156578|gb|ACM05705.1| ribonucleoside-diphosphate reductase, beta subunit [Thermomicrobium
           roseum DSM 5159]
          Length = 328

 Score = 88.6 bits (218), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DESLHL+FGI +I  I  E+P + +  F ++ R ++  A  LE AY    +P+  +GL
Sbjct: 207 LKDESLHLSFGIHLITTILEEHPEIMSAAFGRQLRELILRAVELEEAYNRAVLPEPLIGL 266

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +A    +Y+++IA+RR  ++GL P+     NP  WM   +D+ +  NFFE R   Y+ G
Sbjct: 267 DADVLNRYVRYIADRRLEELGL-PIAFGEPNPLRWMVAQVDMPEIVNFFEARNIHYEVG 324


>gi|254449372|ref|ZP_05062814.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium HTCC5015]
 gi|198261018|gb|EDY85321.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium HTCC5015]
          Length = 404

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/124 (40%), Positives = 66/124 (53%), Gaps = 3/124 (2%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDE +H +FG+ V  QI  E      +   +  R M  E    E  YA   +    +G 
Sbjct: 284 MRDEVMHASFGLRVARQIMREEN---IQPDPKAMREMWDECEAAEEGYARYLLRDPILGY 340

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A       +FIANRR +++ LE  F   EN  PW+ E  +++KEKNFFETRVTEYQ G 
Sbjct: 341 SAEDHVNQFRFIANRRANKLSLEEPFPGAENALPWLDEQANMRKEKNFFETRVTEYQVGG 400

Query: 121 ELKW 124
            L W
Sbjct: 401 GLTW 404


>gi|190570498|ref|YP_001974856.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus Pel]
 gi|213019257|ref|ZP_03335064.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
 gi|190356770|emb|CAQ54129.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus Pel]
 gi|212995366|gb|EEB56007.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
          Length = 329

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 1/120 (0%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           RDE+LH N  I++ N    EN  +W  EF+++  +       LE  +       G V GL
Sbjct: 193 RDETLHTNSIINLFNTFIKENNEIWNDEFKEELYSACRTIVELEDEFISLAFDLGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y+++IANRR  Q+GL+ ++   +NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SAEEVRNYIRYIANRRLTQLGLKSIYNVKDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 312


>gi|29829569|ref|NP_824203.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           avermitilis MA-4680]
 gi|29606677|dbj|BAC70738.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptomyces avermitilis MA-4680]
          Length = 338

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  +V++ ++ E P L+  E QQ+   ML EA   E+ +  +    G  G+N
Sbjct: 212 RDETMHMSFAFEVVDTVRKEEPELFDDELQQQVTDMLREAVEAELQFGRDLCGDGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 272 TESMRQYLECVADQRLQRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRASAYQVAVE 329

Query: 122 LKWD 125
              D
Sbjct: 330 GTVD 333


>gi|126664354|ref|ZP_01735338.1| Ribonucleotide reductase, beta subunit [Marinobacter sp. ELB17]
 gi|126630680|gb|EBA01294.1| Ribonucleotide reductase, beta subunit [Marinobacter sp. ELB17]
          Length = 352

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 74/125 (59%), Gaps = 5/125 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKS-RTMLHEATLLEIAYAHETMPKGFVG 59
           +RDE++H +FG+ V+NQI +E  ++    F  K+ R M  E+   E  YA+  +    +G
Sbjct: 232 LRDEAMHFSFGLKVVNQI-LEEENI---SFDPKAVRDMWDESEAAESDYANYILRDPILG 287

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
            +A    +  +F+ANRR   + L   F   +N  PW+ E   ++KEKNFFETRV EYQ G
Sbjct: 288 YSAEYHIEQFRFVANRRARTVNLPEPFPGAKNVSPWLEEQATMRKEKNFFETRVIEYQTG 347

Query: 120 AELKW 124
           A+L+W
Sbjct: 348 AQLEW 352


>gi|91763118|ref|ZP_01265082.1| ribonucleotide-diphosphate reductase beta subunit [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|91717531|gb|EAS84182.1| ribonucleotide-diphosphate reductase beta subunit [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 342

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQ----QKSRTML-HEATLLEIAYAHETMPK 55
           +RDE+LH N  I +  +   ENP +WT E +    +  RT++ HE   +++A+    M  
Sbjct: 212 VRDETLHCNSMIRLFKEFIHENPEIWTPELKAELYKACRTIIEHEDAFIDLAFEMGPMQ- 270

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL A   + Y++FIANRR  Q+GLEP++   +NP  W+  +++  +  NFFE R TE
Sbjct: 271 ---GLTAQDVKLYIRFIANRRLSQLGLEPIYDVDKNPLTWLDSMLNAVEHMNFFEGRSTE 327

Query: 116 YQQGA 120
           Y + A
Sbjct: 328 YSKAA 332


>gi|58700135|ref|ZP_00374651.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|58533347|gb|EAL57830.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
          Length = 225

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 1/120 (0%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           RDE+LH N  I + N    EN  +W  EF+++  +       LE  +       G V GL
Sbjct: 105 RDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFIKLAFDLGDVEGL 164

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y++++ANRR  Q+GLE ++   +NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 165 SAEEVRNYIRYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 224


>gi|71083845|ref|YP_266565.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|71062958|gb|AAZ21961.1| ribonucleoside-diphosphate reductase beta chain [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 337

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQ----QKSRTML-HEATLLEIAYAHETMPK 55
           +RDE+LH N  I +  +   ENP +WT E +    +  RT++ HE   +++A+    M  
Sbjct: 207 VRDETLHCNSMIRLFKEFIHENPEIWTPELKAELYKACRTIIEHEDAFIDLAFEMGPMQ- 265

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL A   + Y++FIANRR  Q+GLEP++   +NP  W+  +++  +  NFFE R TE
Sbjct: 266 ---GLTAQDVKLYIRFIANRRLSQLGLEPIYDVDKNPLTWLDSMLNAVEHMNFFEGRSTE 322

Query: 116 YQQGA 120
           Y + A
Sbjct: 323 YSKAA 327


>gi|329939692|ref|ZP_08288993.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           griseoaurantiacus M045]
 gi|329301262|gb|EGG45157.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           griseoaurantiacus M045]
          Length = 347

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 73/120 (60%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+ +E  ++   ML EA   E+ +A +    G  G+N
Sbjct: 221 RDETMHMSFAFDVVDTVRKEEPGLFDEELGRQVTDMLREAVEAELQFARDLCGDGLPGMN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 281 TESMRQYLQCVADQRLVRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRASAYQVAVE 338


>gi|317122809|ref|YP_004102812.1| ribonucleoside-diphosphate reductase [Thermaerobacter marianensis
           DSM 12885]
 gi|315592789|gb|ADU52085.1| Ribonucleoside-diphosphate reductase [Thermaerobacter marianensis
           DSM 12885]
          Length = 336

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 72/121 (59%), Gaps = 1/121 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DESLHL+FGI +I  +  E+P L T EF ++ + ++  A  LE  Y    +P+  +G+
Sbjct: 214 LKDESLHLSFGIHLITTLLEEHPELMTPEFAREVKGLILRAVELERDYNRALLPRPILGV 273

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y++++ +RR  ++GL P F  T NP  WM+  +D+ +  NFFE R   Y+  A
Sbjct: 274 SADYLNAYIEYVTDRRLDELGLGPHFG-TPNPAQWMATEVDVPEIVNFFEARNIHYEVAA 332

Query: 121 E 121
           +
Sbjct: 333 D 333


>gi|254455551|ref|ZP_05068980.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Pelagibacter sp. HTCC7211]
 gi|207082553|gb|EDZ59979.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Pelagibacter sp. HTCC7211]
          Length = 335

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTML-HEATLLEIAYAHETMPK 55
           +RDE+LH N  I +  +   ENP +WT    KE  +  RT++ HE   +++A+    M  
Sbjct: 205 VRDETLHCNSMIRIFKEFINENPEIWTPKLKKELYEACRTIIAHEDAFIDLAFEMGPME- 263

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL A   + Y++FI NRR  Q+GLEP++   +NP  W+  +++  +  NFFE R TE
Sbjct: 264 ---GLTAQEVKDYIRFIGNRRLTQLGLEPIYDVDKNPLGWLDTMLNAVEHMNFFEGRATE 320

Query: 116 YQQGA 120
           Y + +
Sbjct: 321 YSKAS 325


>gi|297202281|ref|ZP_06919678.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sviceus ATCC 29083]
 gi|197710199|gb|EDY54233.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sviceus ATCC 29083]
          Length = 340

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+    QQ+   ML EA   E+ +A +    G  G+N
Sbjct: 214 RDETMHMSFAFDVVDTVRKEEPELFDDRLQQQVTDMLAEAVEAELQFARDLCGDGLPGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 274 TESMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331

Query: 122 LKWD 125
              D
Sbjct: 332 GTVD 335


>gi|258542157|ref|YP_003187590.1| ribonucleotide-diphosphate reductase subunit beta [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256633235|dbj|BAH99210.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636294|dbj|BAI02263.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639347|dbj|BAI05309.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642403|dbj|BAI08358.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645458|dbj|BAI11406.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648511|dbj|BAI14452.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651564|dbj|BAI17498.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654555|dbj|BAI20482.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 339

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 73/125 (58%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTML-HEATLLEIAYAHETMPK 55
           +RDE+LH    I +      ENP LWT++ + +     RT++ HE   +++A+    +  
Sbjct: 204 VRDETLHCLSIIRLFRVFIQENPELWTEQLRTELTDICRTIVEHEEAFIDLAFEMGAVE- 262

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GLNA   + Y+ FIA+RR  Q+GLEP++  T NP PW+ ++++  +  NFFE R TE
Sbjct: 263 ---GLNAEQVKTYIHFIADRRLTQLGLEPIYNTTTNPLPWLDDMLNAVEHTNFFENRATE 319

Query: 116 YQQGA 120
           Y + +
Sbjct: 320 YSRAS 324


>gi|42520108|ref|NP_966023.1| ribonucleotide-diphosphate reductase subunit beta [Wolbachia
           endosymbiont of Drosophila melanogaster]
 gi|58696705|ref|ZP_00372253.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila simulans]
 gi|58698234|ref|ZP_00373154.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|225630036|ref|YP_002726827.1| ribonucleotide-diphosphate reductase beta subunit [Wolbachia sp.
           wRi]
 gi|42409845|gb|AAS13957.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila melanogaster]
 gi|58535261|gb|EAL59340.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|58537117|gb|EAL60231.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila simulans]
 gi|225592017|gb|ACN95036.1| ribonucleotide-diphosphate reductase beta subunit [Wolbachia sp.
           wRi]
          Length = 329

 Score = 87.4 bits (215), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 1/120 (0%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           RDE+LH N  I + N    EN  +W  EF+++  +       LE  +       G V GL
Sbjct: 193 RDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFIKLAFDLGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y++++ANRR  Q+GLE ++   +NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SAEEVRNYIRYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 312


>gi|294631326|ref|ZP_06709886.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. e14]
 gi|292834659|gb|EFF93008.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. e14]
          Length = 339

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + +Q+   ML EA   E+ +A +    G  G+N
Sbjct: 213 RDETMHMSFAFDVVDTVRKEEPDLFDDQLEQQVTDMLREAVEAELQFARDLCGDGLPGMN 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 273 TDSMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 330

Query: 122 LKWD 125
              D
Sbjct: 331 GTVD 334


>gi|88861512|ref|ZP_01136127.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
 gi|88816487|gb|EAR26327.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
          Length = 219

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTML-HEATLLEIAYAHETMPK 55
           +RDE+LH N  I +  +   ENP +WT    KE  +  R ++ HE   +++A+    M  
Sbjct: 89  VRDETLHCNSMIRIFKEFIKENPEIWTPTLKKELYEACRIIVEHEDAFIDLAFEMGPME- 147

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL A   + Y++FIANRR  Q+GLEP++   +NP  W+  +++  +  NFFE R TE
Sbjct: 148 ---GLTAQEVKDYIRFIANRRLIQLGLEPIYDVQKNPLTWLDTMLNAVEHMNFFEGRATE 204

Query: 116 YQQGA 120
           Y + +
Sbjct: 205 YSKAS 209


>gi|239947951|ref|ZP_04699704.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsia
           endosymbiont of Ixodes scapularis]
 gi|239922227|gb|EER22251.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsia
           endosymbiont of Ixodes scapularis]
          Length = 327

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 72/125 (57%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           +RDE+LH N  I +     IENP +WT+  +++      T++H E   +E+A+       
Sbjct: 189 VRDETLHTNSIITLFKTFVIENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 244

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TE
Sbjct: 245 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATE 304

Query: 116 YQQGA 120
           Y + A
Sbjct: 305 YSKAA 309


>gi|256825983|ref|YP_003149943.1| ribonucleotide reductase subunit beta [Kytococcus sedentarius DSM
           20547]
 gi|256689376|gb|ACV07178.1| ribonucleotide reductase, beta subunit [Kytococcus sedentarius DSM
           20547]
          Length = 365

 Score = 87.0 bits (214), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F  +V+  ++ E P L+  E   + R ML EA   E  +A + +  G  GL+
Sbjct: 239 RDESMHMAFAFEVVETVRSEEPDLFDAEMAGQVRQMLMEAVDAEAQFAEDLLGMGVAGLS 298

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                 Y++ +A+RR  Q+G+  ++  T+NP  +M E+ D+++  NFFE RV+ YQ G E
Sbjct: 299 VADMRAYLENVADRRAVQLGMPEIYG-TKNPLAFM-ELQDVQELSNFFERRVSAYQVGVE 356


>gi|329113329|ref|ZP_08242110.1| Ribonucleoside-diphosphate reductase subunit beta [Acetobacter
           pomorum DM001]
 gi|326697154|gb|EGE48814.1| Ribonucleoside-diphosphate reductase subunit beta [Acetobacter
           pomorum DM001]
          Length = 339

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 73/125 (58%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTML-HEATLLEIAYAHETMPK 55
           +RDE+LH    I +      ENP LWT++ + +     RT++ HE   +++A+    +  
Sbjct: 204 VRDETLHCLSIIRLFRVFIQENPELWTEQLRTELTDICRTIVEHEEAFIDLAFEMGAVE- 262

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GLNA   + Y+ FIA+RR  Q+GLEP++  T NP PW+ ++++  +  NFFE R TE
Sbjct: 263 ---GLNAEQVKTYIHFIADRRLTQLGLEPIYNTTTNPLPWLDDMLNAVEHTNFFENRSTE 319

Query: 116 YQQGA 120
           Y + +
Sbjct: 320 YSRAS 324


>gi|302554045|ref|ZP_07306387.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           viridochromogenes DSM 40736]
 gi|302471663|gb|EFL34756.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           viridochromogenes DSM 40736]
          Length = 341

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + +Q+   ML EA   E+ +A +    G  G+N
Sbjct: 215 RDETMHMSFAFDVVDTVRKEEPELFDDQLRQEVTDMLREAVEAELQFARDLCGDGLPGMN 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 275 TESMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 332

Query: 122 LKWD 125
              D
Sbjct: 333 GTVD 336


>gi|239982206|ref|ZP_04704730.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           albus J1074]
 gi|291454052|ref|ZP_06593442.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
           albus J1074]
 gi|291357001|gb|EFE83903.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
           albus J1074]
          Length = 350

 Score = 86.7 bits (213), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 74/120 (61%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + Q++   ML EA   E+ +A +    G  G+N
Sbjct: 224 RDETMHMSFAFDVVDTVRKEEPELFDDKLQEQVVAMLKEAVEAELQFARDLCGDGLPGMN 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE RV+ YQ   E
Sbjct: 284 TESMREYLECVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRVSAYQVAVE 341


>gi|99036000|ref|ZP_01315041.1| hypothetical protein Wendoof_01000112 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 329

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 1/120 (0%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           RDE+LH N  I + N    EN  +W  EF+++  +       LE  +       G V GL
Sbjct: 193 RDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFIKLAFDLGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y++++ANRR  Q+GLE ++   +NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SAEEVRNYIRYVANRRLMQLGLESIYDVNDNPTPWLDEILNGVEHTNFFENRVTEYSRAA 312


>gi|225677302|ref|ZP_03788281.1| ribonucleotide-diphosphate reductase beta [Wolbachia endosymbiont
           of Muscidifurax uniraptor]
 gi|225590665|gb|EEH11913.1| ribonucleotide-diphosphate reductase beta [Wolbachia endosymbiont
           of Muscidifurax uniraptor]
          Length = 329

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 1/120 (0%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           RDE+LH N  I + N    EN  +W  EF+++  +       LE  +       G V GL
Sbjct: 193 RDETLHTNSIIMLFNTFIKENNEIWDDEFKEELYSACRTIVELEDEFIKLAFDFGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y+ ++ANRR  Q+GLE ++   +NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SAEEVRNYIHYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 312


>gi|110802082|ref|YP_699620.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens SM101]
 gi|110682583|gb|ABG85953.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens SM101]
          Length = 344

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 2/123 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P ++TKE +++ R M+      EIA+ H  +     G+N
Sbjct: 218 RDENTHLWLFRSIIKELKEEIPEVFTKELKEELREMMRTGVEHEIAWGHYVIGDNVTGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++I N R   IGLEPLF+ Y ENP PW+    D  + K +FFE + T Y + 
Sbjct: 278 KNLIERYIKYIGNLRAKAIGLEPLFEGYNENPAPWVDYYADANQVKTDFFEAKSTAYAKA 337

Query: 120 AEL 122
             L
Sbjct: 338 GAL 340


>gi|307328555|ref|ZP_07607729.1| Ribonucleoside-diphosphate reductase [Streptomyces violaceusniger
           Tu 4113]
 gi|306885823|gb|EFN16835.1| Ribonucleoside-diphosphate reductase [Streptomyces violaceusniger
           Tu 4113]
          Length = 340

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 72/120 (60%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F   V++ ++ E P L+  E +Q+   ML EA   E+ +A +    G  G+N
Sbjct: 214 RDESMHMEFAFSVVDTVREEEPDLFDDELRQQVTDMLKEAVEAELQFARDLCGDGLPGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S ++Y+Q +A++R  ++G   +F  +ENPF +M E+ ++++  NFFE R + YQ   E
Sbjct: 274 TASMQEYLQCVADQRLMRLGFPAVFG-SENPFSFM-ELQNVQELTNFFERRASAYQVAVE 331


>gi|302558498|ref|ZP_07310840.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           griseoflavus Tu4000]
 gi|302476116|gb|EFL39209.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           griseoflavus Tu4000]
          Length = 341

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+ ++  Q+   ML EA   E+ +A +    G  G+N
Sbjct: 215 RDETMHMSFAFDVVDTVRKEEPELFDEQLGQQVTAMLREAVEAELQFARDLCGDGLPGMN 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 275 TESMRQYLECVADQRLVRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 332

Query: 122 LKWD 125
              D
Sbjct: 333 GTVD 336


>gi|313836278|gb|EFS73992.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA2]
 gi|314928743|gb|EFS92574.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL044PA1]
 gi|314971220|gb|EFT15318.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA3]
 gi|328906508|gb|EGG26283.1| ribonucleotide-diphosphate reductase subunit beta
           [Propionibacterium sp. P08]
          Length = 324

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 71/120 (59%), Gaps = 5/120 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G  G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPDIATDEFAVEIHDMILKGVEMEAQYNRDMLPRGIPGM 263

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA     Y++++A+RR  ++GLEP + +  NP  WM+   D  +  NFFET  T Y+  A
Sbjct: 264 NA----DYVKYLADRRLEELGLEPEY-HVANPAKWMATANDTLQLVNFFETTNTSYEVNA 318


>gi|254388985|ref|ZP_05004216.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           clavuligerus ATCC 27064]
 gi|294814921|ref|ZP_06773564.1| Ribonucleoside-diphosphate reductase beta chain protein
           [Streptomyces clavuligerus ATCC 27064]
 gi|326443293|ref|ZP_08218027.1| Ribonucleoside-diphosphate reductase [Streptomyces clavuligerus
           ATCC 27064]
 gi|197702703|gb|EDY48515.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           clavuligerus ATCC 27064]
 gi|218078699|emb|CAB90708.3| class Ia ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces clavuligerus ATCC 27064]
 gi|294327520|gb|EFG09163.1| Ribonucleoside-diphosphate reductase beta chain protein
           [Streptomyces clavuligerus ATCC 27064]
          Length = 339

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ ++ +    G  G+N
Sbjct: 213 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVEAELQFSRDLCGDGLPGMN 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 273 TESMREYLQCVADQRLARLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 330

Query: 122 LKWD 125
              D
Sbjct: 331 GSVD 334


>gi|296116311|ref|ZP_06834927.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295977130|gb|EFG83892.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 334

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 1/121 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDE+LH      +      ENP +WT++ Q   R +  +    E A+   +   G V G
Sbjct: 204 VRDETLHCVSMARLFRVFVQENPEIWTQKLQDDIRQICRDIVEHEDAFIDLSFEMGPVEG 263

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L+A   ++Y++F+ANRR  Q+GL+ L+    NP PW+ E+++  +  NFFE R TEY + 
Sbjct: 264 LDAAQVKRYIRFVANRRLGQLGLDGLYDVATNPLPWVDEMVNAVEHANFFENRSTEYSRA 323

Query: 120 A 120
           A
Sbjct: 324 A 324


>gi|330994651|ref|ZP_08318574.1| putative ribonucleoside-diphosphate reductase small subunit
           [Gluconacetobacter sp. SXCC-1]
 gi|329758292|gb|EGG74813.1| putative ribonucleoside-diphosphate reductase small subunit
           [Gluconacetobacter sp. SXCC-1]
          Length = 365

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH +    +      ENP +WT   +   R +  +    E A+   +   G V G
Sbjct: 234 VRDESLHCDSMARLFRVFVQENPEIWTDTLRDDIRQICRDIVEHEDAFIDLSFEMGAVEG 293

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L+A   ++Y++F+ANRR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TEY + 
Sbjct: 294 LDAGQVKRYIRFVANRRLGQLGLDGIYDIATNPLPWVDEMVNAVEHANFFENRATEYSRA 353

Query: 120 AEL-KWD 125
           +    WD
Sbjct: 354 STTGTWD 360


>gi|302542646|ref|ZP_07294988.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302460264|gb|EFL23357.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           himastatinicus ATCC 53653]
          Length = 343

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 71/120 (59%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F   V++ ++ E P L+  + +++   ML EA   E+ +AH+    G  G+N
Sbjct: 217 RDESMHMEFAFSVVDTVREEEPDLFDDDLERQVTDMLKEAVEAELQFAHDLCGDGLPGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S   Y++ +A++R  ++G   +F  +ENPF +M E+ D+++  NFFE R + YQ   E
Sbjct: 277 TESMRAYLECVADQRLARLGFPAVFG-SENPFSFM-ELQDVQELTNFFERRASAYQVAVE 334


>gi|328950373|ref|YP_004367708.1| Ribonucleoside-diphosphate reductase [Marinithermus hydrothermalis
           DSM 14884]
 gi|328450697|gb|AEB11598.1| Ribonucleoside-diphosphate reductase [Marinithermus hydrothermalis
           DSM 14884]
          Length = 332

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DESLHL+FG+ +I     E   + T    ++ R ++ EA  LE AY    +P+  +GL
Sbjct: 211 LKDESLHLSFGLHLITGFLEEYSEVMTPRLAREVRGLILEAVQLERAYNQALLPRPILGL 270

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +A +   Y++++A+RR  ++GLE  F  T NP  WM+  +D+ +  NFFE   T Y+ G
Sbjct: 271 SAETLNAYVEYVADRRLEELGLEAAFG-TPNPAKWMATEVDVPEIVNFFEAVNTSYEVG 328


>gi|313903043|ref|ZP_07836438.1| Ribonucleoside-diphosphate reductase [Thermaerobacter subterraneus
           DSM 13965]
 gi|313466767|gb|EFR62286.1| Ribonucleoside-diphosphate reductase [Thermaerobacter subterraneus
           DSM 13965]
          Length = 336

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 71/121 (58%), Gaps = 1/121 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           ++DESLHL+FGI +I  +  E+P L T  F ++ + ++  A  LE  Y    +P+  +G+
Sbjct: 214 LKDESLHLSFGIHLITALLEEHPELMTPAFAREVKGLILRAVELERDYNRALLPRPILGV 273

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A     Y++++ +RR  ++GL P F  T NP  WM+  +D+ +  NFFE R   Y+  A
Sbjct: 274 SADYLNAYVEYVTDRRLDELGLGPHFG-TPNPAKWMATEVDVPEIVNFFEARNIHYEVAA 332

Query: 121 E 121
           +
Sbjct: 333 D 333


>gi|18311342|ref|NP_563276.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens str. 13]
 gi|110801267|ref|YP_697050.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens ATCC 13124]
 gi|168205189|ref|ZP_02631194.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens E str. JGS1987]
 gi|168210336|ref|ZP_02635961.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens B str. ATCC 3626]
 gi|168213271|ref|ZP_02638896.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens CPE str. F4969]
 gi|168216675|ref|ZP_02642300.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens NCTC 8239]
 gi|169347055|ref|ZP_02865997.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens C str. JGS1495]
 gi|182625797|ref|ZP_02953564.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens D str. JGS1721]
 gi|18146026|dbj|BAB82066.1| ribonucleoside-diphosphate reductase beta subunit [Clostridium
           perfringens str. 13]
 gi|110675914|gb|ABG84901.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens ATCC 13124]
 gi|169296738|gb|EDS78867.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens C str. JGS1495]
 gi|170663363|gb|EDT16046.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens E str. JGS1987]
 gi|170711548|gb|EDT23730.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens B str. ATCC 3626]
 gi|170715235|gb|EDT27417.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens CPE str. F4969]
 gi|177908953|gb|EDT71440.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens D str. JGS1721]
 gi|182381151|gb|EDT78630.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens NCTC 8239]
          Length = 344

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 2/123 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P ++TKE +++ R M+      EIA+ H  +     G+N
Sbjct: 218 RDENTHLWLFRSIIKELKEEIPEVFTKELKEELREMVRTGVEHEIAWGHYVIGDNVTGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++I N R   IGLEPLF+ Y ENP PW+    D  + K +FFE + T Y + 
Sbjct: 278 KNLIERYIKYIGNLRVKAIGLEPLFEGYNENPAPWVDYYADANQVKTDFFEAKSTAYAKA 337

Query: 120 AEL 122
             L
Sbjct: 338 GAL 340


>gi|21223593|ref|NP_629372.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           coelicolor A3(2)]
 gi|7328345|emb|CAB82486.1| class I ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces coelicolor A3(2)]
 gi|8546891|emb|CAB94610.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           coelicolor A3(2)]
          Length = 343

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + +++   ML EA   E+ +A +    G  G+N
Sbjct: 217 RDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDMLREAVEAELQFARDLCGDGLPGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 277 TDSMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 334

Query: 122 LKWD 125
              D
Sbjct: 335 GTVD 338


>gi|256785295|ref|ZP_05523726.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           lividans TK24]
 gi|289769189|ref|ZP_06528567.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           lividans TK24]
 gi|289699388|gb|EFD66817.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           lividans TK24]
          Length = 343

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + +++   ML EA   E+ +A +    G  G+N
Sbjct: 217 RDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDMLREAVEAELQFARDLCGDGLPGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 277 TDSMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 334

Query: 122 LKWD 125
              D
Sbjct: 335 GTVD 338


>gi|295836584|ref|ZP_06823517.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB74]
 gi|197697282|gb|EDY44215.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB74]
          Length = 345

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 72/120 (60%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  E +Q+ + ML  A   E+ +A +    G  G+N
Sbjct: 219 RDETMHMSFAFDVVDTVRKEEPELFDAELEQEVKDMLDGAVNAELQFARDLCGDGLPGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y+Q +A++R  ++G  P++  + NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 279 TESMREYLQCVADQRLQRLGFAPVYG-SSNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 336


>gi|42523460|ref|NP_968840.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
           bacteriovorus HD100]
 gi|39575666|emb|CAE79833.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
           bacteriovorus HD100]
          Length = 336

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 71/119 (59%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F I+V+   + E P L+ ++ +     ML +A   E+ +AH+ +  G  GL+
Sbjct: 210 RDESMHMAFAIEVVKTARKEEPELFNQQMEDMVVQMLEDAIECEMEFAHDVLNLGVAGLS 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY+++ A++R   + + P +   +NPF +M E+ D+++  NFFE RV+ YQ G 
Sbjct: 270 AKDMRQYLEYCADQRLESLNIAPRYN-VKNPFIFM-ELQDMQELANFFERRVSAYQTGV 326


>gi|297192180|ref|ZP_06909578.1| ribonucleoside-diphosphate reductase subunit beta protein
           [Streptomyces pristinaespiralis ATCC 25486]
 gi|197720175|gb|EDY64083.1| ribonucleoside-diphosphate reductase subunit beta protein
           [Streptomyces pristinaespiralis ATCC 25486]
          Length = 340

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 73/120 (60%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+  E +Q+   ML EA   E+ +  +   +G  G+N
Sbjct: 214 RDETMHMNFAFEVVDTVRKEEPELFDDELRQQVTDMLKEAVEAELQFGRDLCGEGLPGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y+Q +A++R  ++G  P++  ++NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 274 TESMREYLQCVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331


>gi|328884923|emb|CCA58162.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Streptomyces venezuelae ATCC 10712]
          Length = 338

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 72/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    +Q+   ML EA   E+ +  +    G  G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPELFDDALRQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 272 TESMREYLQCVADQRLQRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329

Query: 122 LKWD 125
              D
Sbjct: 330 GSVD 333


>gi|209966751|ref|YP_002299666.1| ribonucleotide-diphosphate reductase subunit beta [Rhodospirillum
           centenum SW]
 gi|209960217|gb|ACJ00854.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodospirillum
           centenum SW]
          Length = 322

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 77/131 (58%), Gaps = 10/131 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           +RDE+LH    I +      ENP +WT+ FQ++      T++H E   +++A+  E  P 
Sbjct: 191 VRDETLHTLSMIKLFRTFVNENPQVWTEAFQRELTVCCETIVHHEDAFIDLAF--EMGPV 248

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              G+ A   ++Y+++IA+RR  Q+GLEP+++  +NP PWM  +++  +  NFFE R TE
Sbjct: 249 E--GMTAEDVKRYIRWIADRRLGQLGLEPVYRIEKNPLPWMDAILNGIEHTNFFENRATE 306

Query: 116 YQQGAEL-KWD 125
           Y + A    WD
Sbjct: 307 YSKAATRGTWD 317


>gi|239944172|ref|ZP_04696109.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces roseosporus NRRL 15998]
 gi|239990628|ref|ZP_04711292.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces roseosporus NRRL 11379]
 gi|291447643|ref|ZP_06587033.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           roseosporus NRRL 15998]
 gi|291350590|gb|EFE77494.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           roseosporus NRRL 15998]
          Length = 338

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 71/120 (59%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+  E QQ+   ML EA   E+ +  +   +G  G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPDLFDDELQQQVTDMLKEAVEAELQFGRDLCGEGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P    +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 272 TESMRQYLECVADQRLARLGF-PTVYGSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329


>gi|239929012|ref|ZP_04685965.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           ghanaensis ATCC 14672]
          Length = 339

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+ +   Q+   ML EA   E+ +A +    G  G+N
Sbjct: 213 RDETMHMSFAFDVVDTVRKEEPELFDERLGQQVTDMLREAVEAELQFARDLCGDGLPGMN 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 273 TESMRQYLECVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 330

Query: 122 LKWD 125
              D
Sbjct: 331 GTVD 334


>gi|291437353|ref|ZP_06576743.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           ghanaensis ATCC 14672]
 gi|291340248|gb|EFE67204.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           ghanaensis ATCC 14672]
          Length = 340

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+ +   Q+   ML EA   E+ +A +    G  G+N
Sbjct: 214 RDETMHMSFAFDVVDTVRKEEPELFDERLGQQVTDMLREAVEAELQFARDLCGDGLPGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 274 TESMRQYLECVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331

Query: 122 LKWD 125
              D
Sbjct: 332 GTVD 335


>gi|114327552|ref|YP_744709.1| ribonucleotide-diphosphate reductase subunit beta [Granulibacter
           bethesdensis CGDNIH1]
 gi|114315726|gb|ABI61786.1| ribonucleoside-diphosphate reductase beta chain [Granulibacter
           bethesdensis CGDNIH1]
          Length = 339

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 74/127 (58%), Gaps = 9/127 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTML-----HEATLLEIAYAHETMPK 55
           +RDE+LH    I + +    EN  +WT++ +Q+ R +      HE   +++A+   ++  
Sbjct: 209 VRDETLHCLSIIKLFHVFIDENREIWTEDLRQEIRQICATIVEHEDAFIDLAFELGSVE- 267

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL+A   + Y+++IA+RR  Q+GLEPLF    NP PW+ ++++  +  NFFE R TE
Sbjct: 268 ---GLDAAQVKSYIRYIADRRLIQLGLEPLFHVERNPLPWIDDMLNAVEHANFFENRATE 324

Query: 116 YQQGAEL 122
           Y + + +
Sbjct: 325 YSRASTV 331


>gi|157964544|ref|YP_001499368.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           massiliae MTU5]
 gi|157844320|gb|ABV84821.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia
           massiliae MTU5]
          Length = 336

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           +RDE+LH N  I +      ENP +WT+  +++      T++H E   +E+A+       
Sbjct: 190 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 245

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TE
Sbjct: 246 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATE 305

Query: 116 YQQGA 120
           Y + A
Sbjct: 306 YSKAA 310


>gi|15892574|ref|NP_360288.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           conorii str. Malish 7]
 gi|34580440|ref|ZP_00141920.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           sibirica 246]
 gi|157828524|ref|YP_001494766.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165933242|ref|YP_001650031.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. Iowa]
 gi|229586746|ref|YP_002845247.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           africae ESF-5]
 gi|238650260|ref|YP_002916112.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           peacockii str. Rustic]
 gi|15619738|gb|AAL03189.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia conorii
           str. Malish 7]
 gi|28261825|gb|EAA25329.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           sibirica 246]
 gi|157801005|gb|ABV76258.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165908329|gb|ABY72625.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           rickettsii str. Iowa]
 gi|228021796|gb|ACP53504.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia africae
           ESF-5]
 gi|238624358|gb|ACR47064.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           peacockii str. Rustic]
          Length = 328

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           +RDE+LH N  I +      ENP +WT+  +++      T++H E   +E+A+       
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 244

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TE
Sbjct: 245 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRTTE 304

Query: 116 YQQGA 120
           Y + A
Sbjct: 305 YSKAA 309


>gi|157825769|ref|YP_001493489.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia akari
           str. Hartford]
 gi|157799727|gb|ABV74981.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia akari
           str. Hartford]
          Length = 327

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           +RDE+LH N  I +      ENP +WT+  +++      T++H E   +E+A+       
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 244

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TE
Sbjct: 245 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATE 304

Query: 116 YQQGA 120
           Y + A
Sbjct: 305 YSKAA 309


>gi|282861024|ref|ZP_06270089.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. ACTE]
 gi|282563682|gb|EFB69219.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. ACTE]
          Length = 340

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 71/120 (59%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +   +G  G+N
Sbjct: 214 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLREAVEAELQFGRDLCGEGLPGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G   L+  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 274 TESMRQYLECVADQRLTRLGFPALYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331


>gi|157803769|ref|YP_001492318.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           canadensis str. McKiel]
 gi|157785032|gb|ABV73533.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           canadensis str. McKiel]
          Length = 324

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           +RDE+LH N  I +      ENP +WT+  +++      T++H E   +E+A+       
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYGACTTIVHFEDAFIELAFE----VG 244

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TE
Sbjct: 245 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATE 304

Query: 116 YQQGA 120
           Y + A
Sbjct: 305 YSKAA 309


>gi|31322342|gb|AAP15464.1| ribonucleotide reductase small subunit [Rickettsia rickettsii str.
           'Sheila Smith']
          Length = 336

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           +RDE+LH N  I +      ENP +WT+  +++      T++H E   +E+A+       
Sbjct: 197 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 252

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TE
Sbjct: 253 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRTTE 312

Query: 116 YQQGA 120
           Y + A
Sbjct: 313 YSKAA 317


>gi|67459102|ref|YP_246726.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia felis
           URRWXCal2]
 gi|67004635|gb|AAY61561.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia felis
           URRWXCal2]
          Length = 327

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           +RDE+LH N  I +      ENP +WT+  +++      T++H E   +E+A+       
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 244

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TE
Sbjct: 245 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATE 304

Query: 116 YQQGA 120
           Y + A
Sbjct: 305 YSKAA 309


>gi|15604372|ref|NP_220888.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           prowazekii str. Madrid E]
 gi|51473694|ref|YP_067451.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia typhi
           str. Wilmington]
 gi|3861064|emb|CAA14964.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN (nrdB) [Rickettsia
           prowazekii]
 gi|51460006|gb|AAU03969.1| Ribonucleotide reductase [Rickettsia typhi str. Wilmington]
 gi|292572126|gb|ADE30041.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia
           prowazekii Rp22]
          Length = 324

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           +RDE+LH N  I +      ENP +WT+  +++      T++H E   +E+A+       
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFE----VG 244

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TE
Sbjct: 245 GIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATE 304

Query: 116 YQQGA 120
           Y + A
Sbjct: 305 YSKAA 309


>gi|320008647|gb|ADW03497.1| Ribonucleoside-diphosphate reductase [Streptomyces flavogriseus
           ATCC 33331]
          Length = 338

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 71/120 (59%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+  E +Q+   ML EA   E+ +  +    G  G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPDLFDDELRQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G   L+  +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 272 TESMRQYLECVADQRLTRLGFPALYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329


>gi|320107274|ref|YP_004182864.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
 gi|319925795|gb|ADV82870.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
          Length = 346

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES HL F  +V+  ++ + P LW  E +++   M+ EA   E  +A + +  G  GL+
Sbjct: 220 RDESAHLEFAFEVVQVVRAQEPDLWDTELERQVVVMMEEAIDAEAQFAEDLLSGGVAGLS 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY+ ++A+ R  ++G+   F   +NPF +M E+ D+++  NFFE RV+ YQ   
Sbjct: 280 VRDMRQYLGYVADSRLERLGIGAHFN-AKNPFSFM-ELQDVQELTNFFERRVSAYQTAV 336


>gi|254384639|ref|ZP_04999978.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
           Mg1]
 gi|194343523|gb|EDX24489.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
           Mg1]
          Length = 338

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +    G  G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVDAELQFGRDLCGDGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 272 TESMREYLECVADQRLVRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329

Query: 122 LKWD 125
              D
Sbjct: 330 GTVD 333


>gi|182436093|ref|YP_001823812.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326776718|ref|ZP_08235983.1| Ribonucleoside-diphosphate reductase [Streptomyces cf. griseus
           XylebKG-1]
 gi|178464609|dbj|BAG19129.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326657051|gb|EGE41897.1| Ribonucleoside-diphosphate reductase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 338

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 70/120 (58%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +   +G  G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPDLFDDALQQQVTDMLKEAVEAELQFGRDLCGEGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P    +ENPF +M E+  +++  NFFE R + YQ   E
Sbjct: 272 TESMRQYLECVADQRLARLGF-PTVYGSENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329


>gi|302536805|ref|ZP_07289147.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
           C]
 gi|302445700|gb|EFL17516.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
           C]
          Length = 356

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +    G  G+N
Sbjct: 230 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 289

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 290 TDSMREYLECVADQRLVRLGFPPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 347

Query: 122 LKWD 125
              D
Sbjct: 348 GTVD 351


>gi|311898297|dbj|BAJ30705.1| putative ribonucleoside-diphosphate reductase subunit beta
           [Kitasatospora setae KM-6054]
          Length = 339

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 73/120 (60%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H++F   V++ ++ E P L+  +  ++   ML EA   E+ +A +   +G  G+N
Sbjct: 213 RDESMHMDFAFSVVDTVREEEPDLFDDKMARQVTEMLEEAVEAELQFARDLCGEGLPGMN 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y+Q +A++R  ++GL P+   + NPF +M E+ ++++  NFFE RV+ YQ   E
Sbjct: 273 TESMREYLQAVADQRLARLGL-PIRYGSTNPFGFM-ELQNVQELTNFFERRVSAYQIAVE 330


>gi|296536499|ref|ZP_06898590.1| ribonucleotide-diphosphate reductase subunit beta [Roseomonas
           cervicalis ATCC 49957]
 gi|296263178|gb|EFH09712.1| ribonucleotide-diphosphate reductase subunit beta [Roseomonas
           cervicalis ATCC 49957]
          Length = 343

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK-----SRTMLHEATLLEIAYAHETMPK 55
           +RDE+LH    I +      ENP +WT++ +       +  + HE   +++A+       
Sbjct: 198 VRDETLHCLSVIRLFRTFIQENPEIWTEQLKADLVEICTTIVEHEDAFIDLAFEL----G 253

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           G  G+     +QY++FIA+RR  Q+GLEP +   +NP PW+ E+++  +  NFFE R TE
Sbjct: 254 GVQGMEPEDVKQYIRFIADRRLQQLGLEPHYGTEKNPLPWLDEILNAVEHMNFFEGRATE 313

Query: 116 YQQGA 120
           Y + +
Sbjct: 314 YSKAS 318


>gi|56416698|ref|YP_153772.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. St. Maries]
 gi|254994906|ref|ZP_05277096.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Mississippi]
 gi|255003042|ref|ZP_05278006.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Puerto Rico]
 gi|255004164|ref|ZP_05278965.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Virginia]
 gi|56387930|gb|AAV86517.1| ribonuceoside-diphosphate reductase beta chain [Anaplasma marginale
           str. St. Maries]
          Length = 324

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           RDE+LH    I + N    EN  +W +  +++          LE  +       G V GL
Sbjct: 193 RDETLHTESIIRLFNTFIHENQEIWDENLREELYGACRVIVSLEDEFIDLAFALGDVEGL 252

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A   ++Y+++IANRR  Q+ LEP++    NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 253 SAAEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNFFENRVTEYSRAA 312

Query: 121 -ELKWD 125
            E  WD
Sbjct: 313 TEGTWD 318


>gi|222475064|ref|YP_002563479.1| ribonuceoside-diphosphate reductase beta chain (nrdB) [Anaplasma
           marginale str. Florida]
 gi|222419200|gb|ACM49223.1| ribonuceoside-diphosphate reductase beta chain (nrdB) [Anaplasma
           marginale str. Florida]
          Length = 343

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           RDE+LH    I + N    EN  +W +  +++          LE  +       G V GL
Sbjct: 212 RDETLHTESIIRLFNTFIHENQEIWDENLREELYGACRVIVSLEDEFIDLAFALGDVEGL 271

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +A   ++Y+++IANRR  Q+ LEP++    NP PW+ E+++  +  NFFE RVTEY + A
Sbjct: 272 SAAEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNFFENRVTEYSRAA 331

Query: 121 -ELKWD 125
            E  WD
Sbjct: 332 TEGTWD 337


>gi|154250961|ref|YP_001411785.1| ribonucleotide-diphosphate reductase subunit beta [Parvibaculum
           lavamentivorans DS-1]
 gi|154154911|gb|ABS62128.1| Ribonucleoside-diphosphate reductase [Parvibaculum lavamentivorans
           DS-1]
          Length = 319

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 73/124 (58%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQ----QKSRTMLH-EATLLEIAYAHETMPKG 56
           RDE+LH    + +      ENP +WT+E +    +   T++H E   +++A+   ++   
Sbjct: 190 RDETLHTVSAMKLFRTFVDENPEIWTEELRRDIYKACETIIHHEDAFIDLAFEMGSIE-- 247

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
             GL+A   + Y+++IA+RR  Q+ L+P+++  +NP PWM E+++  +  NFFE R TEY
Sbjct: 248 --GLSAQEVKNYIRYIADRRLVQLNLQPIYRTEKNPLPWMDEMLNGIEHTNFFENRATEY 305

Query: 117 QQGA 120
            + +
Sbjct: 306 SKAS 309


>gi|271967540|ref|YP_003341736.1| ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
           43021]
 gi|270510715|gb|ACZ88993.1| Ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
           43021]
          Length = 331

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 69/120 (57%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES+H+ F   V++ ++ E P L+  +   +   M+ EA   E+A+A +    G  G+N
Sbjct: 205 RDESMHMEFAFSVVDTVRAEEPDLFDDKLGAQVTQMIEEAVEAELAFAADLCGDGMSGMN 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++++A++R  ++   P+   T NPF +M E+ D+++  NFFE RV+ YQ   E
Sbjct: 265 VEQMRQYLEYVADQRLVRLRF-PVRYGTANPFAFM-ELQDVQELANFFERRVSAYQVAVE 322


>gi|269958883|ref|YP_003328672.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           centrale str. Israel]
 gi|269848714|gb|ACZ49358.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           centrale str. Israel]
          Length = 332

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 10/130 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV--- 58
           RDE+LH    I + N    EN  +W        R  L+ A  + ++   E +   F    
Sbjct: 201 RDETLHTESIIRLFNTFIHENQEIWDANL----RAELYGACRVIVSLEDEFIDLAFALGD 256

Query: 59  --GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
             GL+A   ++Y+++IANRR  Q+ LEP++    NP PW+ E+++  +  NFFE RVTEY
Sbjct: 257 VEGLSASEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNFFENRVTEY 316

Query: 117 QQGA-ELKWD 125
            + A E  WD
Sbjct: 317 SRAATEGTWD 326


>gi|115378653|ref|ZP_01465803.1| ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
 gi|115364319|gb|EAU63404.1| ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
          Length = 288

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 2/116 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F  + I   + E P L+    Q     M+ EA   E  +A + +  G  GL+
Sbjct: 158 RDESTHMAFAFEAIRVARQEEPDLFDARMQADVVAMMREAVECETLFAQDLLSGGVAGLS 217

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                QY++++A++R   +GL P+F+  +N  P+M ++ D+++  NFFE RV+ YQ
Sbjct: 218 VQEMRQYLEYVADQRLTMLGLAPVFR-VKNSLPFM-DLQDVQELTNFFERRVSAYQ 271


>gi|156087150|ref|XP_001610982.1| ribonucleoside-diphosphate reductase small subunit [Babesia bovis
           T2Bo]
 gi|154798235|gb|EDO07414.1| ribonucleoside-diphosphate reductase small subunit, putative
           [Babesia bovis]
          Length = 339

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 73/121 (60%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +FG  + +++K + P        +  + ++ EA  +E  +  +++P   +G+N
Sbjct: 214 RDEGLHADFGCFIYSKLKHKLP-------AECVQQIIKEAVAVERVFVCDSLPTDLIGMN 266

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G+ P++K T+NPF WM E+I ++ + NFFE RV EYQ+   
Sbjct: 267 SMLMAQYIEFVADRLLQALGVPPVYK-TKNPFEWM-ELISVQGKTNFFEKRVGEYQKSGI 324

Query: 122 L 122
           L
Sbjct: 325 L 325


>gi|302521843|ref|ZP_07274185.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB78]
 gi|302430738|gb|EFL02554.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB78]
          Length = 345

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 71/120 (59%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + + + + ML  A   E+ +A +    G  G+N
Sbjct: 219 RDETMHMSFAFDVVDTVRKEEPELFDDKLEAEVKEMLAGAVDAELQFARDLCGDGLPGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y+Q +A++R  ++G  P++  + NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 279 TESMREYLQCVADQRLVRLGFSPVYG-SSNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 336


>gi|149916691|ref|ZP_01905193.1| putative ribonucleoside-diphosphate reductase beta chain
           [Plesiocystis pacifica SIR-1]
 gi|149822408|gb|EDM81797.1| putative ribonucleoside-diphosphate reductase beta chain
           [Plesiocystis pacifica SIR-1]
          Length = 356

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F   VI+ ++ + P L+  E +     M+ EA   E+A+A + +  G  GL 
Sbjct: 230 RDESAHMAFAFSVIDVVRDQEPELFDAELEAAVVEMIEEAVACEVAFAEDLLGLGVAGLT 289

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                 Y+++ A++R  ++G+   +  T NP  +M E+ D+ +  NFFE RV+ YQ G  
Sbjct: 290 VADLRAYLEYCADQRLQRLGMATRYGST-NPLSFM-ELQDIPELANFFERRVSAYQHGVS 347

Query: 122 LKWD 125
              D
Sbjct: 348 GTID 351


>gi|91205547|ref|YP_537902.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii RML369-C]
 gi|91069091|gb|ABE04813.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia bellii
           RML369-C]
          Length = 324

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLHEATLLEIAYAHETMPKG 56
           +RDE+LH N  I +      ENP +WT+  + +      T++H      IA A E    G
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTENLRSRIYKACTTIVHFEDAF-IALAFEV--GG 245

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
             GL A     Y+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TEY
Sbjct: 246 IEGLTADEVRLYIRYIADRRLFQLGLKDIYMVKNNPLPWLDEMLNGVEHTNFFENRATEY 305

Query: 117 QQGA 120
            + A
Sbjct: 306 SKAA 309


>gi|157827263|ref|YP_001496327.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii OSU 85-389]
 gi|157802567|gb|ABV79290.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii OSU 85-389]
          Length = 324

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLHEATLLEIAYAHETMPKG 56
           +RDE+LH N  I +      ENP +WT+  + +      T++H      IA A E    G
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTENLRSRIYKACTTIVHFEDAF-IALAFEV--GG 245

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
             GL A     Y+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NFFE R TEY
Sbjct: 246 IEGLTADEVRLYIRYIADRRLFQLGLKDIYMVKNNPLPWLDEMLNGVEHTNFFENRATEY 305

Query: 117 QQGA 120
            + A
Sbjct: 306 SKAA 309


>gi|318060206|ref|ZP_07978929.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actG]
 gi|318077113|ref|ZP_07984445.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actF]
          Length = 345

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 71/120 (59%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  DV++ ++ E P L+  + + + + ML  A   E+ +A +    G  G+N
Sbjct: 219 RDETMHMSFAFDVVDTVRKEEPELFDDKLEAEVKEMLAGAVDAELQFARDLCGDGLPGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y+Q +A++R  ++G  P++  + NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 279 TESMREYLQCVADQRLVRLGFSPVYG-SSNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 336


>gi|310823070|ref|YP_003955428.1| ribonucleoside-diphosphate reductase subunit beta [Stigmatella
           aurantiaca DW4/3-1]
 gi|309396142|gb|ADO73601.1| Ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
          Length = 336

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 2/116 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F  + I   + E P L+    Q     M+ EA   E  +A + +  G  GL+
Sbjct: 206 RDESTHMAFAFEAIRVARQEEPDLFDARMQADVVAMMREAVECETLFAQDLLSGGVAGLS 265

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                QY++++A++R   +GL P+F+  +N  P+M ++ D+++  NFFE RV+ YQ
Sbjct: 266 VQEMRQYLEYVADQRLTMLGLAPVFR-VKNSLPFM-DLQDVQELTNFFERRVSAYQ 319


>gi|290957506|ref|YP_003488688.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           scabiei 87.22]
 gi|260647032|emb|CBG70131.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           scabiei 87.22]
          Length = 355

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 73/124 (58%), Gaps = 2/124 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H++F  +V++ ++ E P L+ +  +Q+   ML EA   E+ +  +    G  G+N
Sbjct: 229 RDETMHMSFAFEVVDTVRKEEPELFDELLRQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 288

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  QY++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE R + YQ   E
Sbjct: 289 TESMRQYLECVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 346

Query: 122 LKWD 125
              D
Sbjct: 347 GTVD 350


>gi|11544904|emb|CAC17630.1| class I ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces jumonjinensis]
          Length = 322

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 67/111 (60%), Gaps = 2/111 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +    G  G+N
Sbjct: 213 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLQEAVEAELQFGSDLCGDGLPGMN 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 112
             S  +Y+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R
Sbjct: 273 TESMREYLQCVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERR 321


>gi|238023979|ref|YP_002908211.1| Ribonucleotide reductase subunit beta [Burkholderia glumae BGR1]
 gi|237878644|gb|ACR30976.1| Ribonucleotide reductase, beta subunit [Burkholderia glumae BGR1]
          Length = 337

 Score = 80.5 bits (197), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/125 (44%), Positives = 71/125 (56%), Gaps = 5/125 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           MRDE LH  FGI VI Q+ +E  HL  +      + +  EA   E AYA   +    +G 
Sbjct: 216 MRDEVLHCGFGIRVIRQL-LEEEHL--RLDPHAVQQIWEEAEAAERAYAQYILRDPILGY 272

Query: 61  NAP-SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +A   CEQ+ +FIANRR  Q+ +   F    N  PW+ E  +L+KEKNFFETRVT+YQ G
Sbjct: 273 SAELHCEQF-RFIANRRATQLSMPAPFPGATNALPWLDEQANLRKEKNFFETRVTDYQSG 331

Query: 120 AELKW 124
             L W
Sbjct: 332 GALDW 336


>gi|325119319|emb|CBZ54873.1| hypothetical protein NCLIV_052980 [Neospora caninum Liverpool]
          Length = 392

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +Q+K + P        +  + M+ EA  +E A+  E +P   +G+N
Sbjct: 267 RDEGLHADFACLLYSQLKNKLP-------DKVVQDMVREAVTVERAFICEALPVDLIGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
             S  QY++F+A+R    +G+  +F +  NPF WM E+I L+ + NFFE RV EYQ+  
Sbjct: 320 NRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFFEKRVGEYQKAG 376


>gi|221480670|gb|EEE19110.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii GT1]
          Length = 391

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +Q+K + P        +  + M+ EA  +E A+  E +P   +G+N
Sbjct: 266 RDEGLHADFACLLYSQLKHKLP-------DKVVQDMVREAVTVERAFICEALPVDLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
             S  QY++F+A+R    +G+  +F +  NPF WM E+I L+ + NFFE RV EYQ+  
Sbjct: 319 NRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFFEKRVGEYQKAG 375


>gi|237845387|ref|XP_002371991.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii ME49]
 gi|211969655|gb|EEB04851.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii ME49]
 gi|221501644|gb|EEE27410.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii VEG]
          Length = 391

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +Q+K + P        +  + M+ EA  +E A+  E +P   +G+N
Sbjct: 266 RDEGLHADFACLLYSQLKHKLP-------DKVVQDMVREAVTVERAFICEALPVDLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
             S  QY++F+A+R    +G+  +F +  NPF WM E+I L+ + NFFE RV EYQ+  
Sbjct: 319 NRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFFEKRVGEYQKAG 375


>gi|840719|emb|CAA54549.1| ribonucleotide reductase R2 [Arabidopsis thaliana]
          Length = 340

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +I+ +++  P        +K   ++HEA  +E  +  + +P   +G+N
Sbjct: 211 RDEGLHCDFACLLISLLQLHVP-------LEKVYQIVHEAVEIETEFVCKALPCDLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY+QF+A+R    +G E  +K  ENPF WM E I L+ + NFFE RV EYQ+ +
Sbjct: 264 SNLMSQYIQFVADRLLVTLGCERTYK-AENPFDWM-EFISLQGKTNFFEKRVGEYQKAS 320


>gi|190572323|ref|YP_001970168.1| putative ribonucleotide diphosphate reductase, small chain
           [Stenotrophomonas maltophilia K279a]
 gi|190010245|emb|CAQ43853.1| putative ribonucleotide diphosphate reductase, small chain
           [Stenotrophomonas maltophilia K279a]
          Length = 339

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 69/120 (57%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F  + +  ++ E P L+ +E +Q+   ML EA   E+ +A + +  G  G++
Sbjct: 213 RDESAHMEFAFESVRVVREEEPDLFDEEMKQQVYDMLAEAIECEVQFAEDVLSGGVAGIS 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY+Q  A++   ++G+E  +    NP P+M E+ D+++  NFFE RV+ YQ G +
Sbjct: 273 TRDMRQYLQHCADQHFAKLGMEKKYN-VRNPLPFM-ELQDVQELTNFFERRVSAYQVGVQ 330


>gi|11544907|emb|CAC17632.1| class I ribonucleotide-diphosphate reductase small chain
           [Streptomyces microflavus]
          Length = 321

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 68/111 (61%), Gaps = 2/111 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE++H+NF  +V++ ++ E P L+    Q++   ML EA   E+ +  +   +G  G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPELFDDALQEQVTAMLKEAVEAELQFGRDLCGEGLPGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 112
             S  +Y+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE R
Sbjct: 272 TESMREYLQCVADQRLTRLGFAPVYG-SENPFAFM-ELQGVQELTNFFERR 320


>gi|254521240|ref|ZP_05133295.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
 gi|219718831|gb|EED37356.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
          Length = 339

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F  + +  ++ E P L+  E +Q+   ML EA   E+ +A + +  G  G++
Sbjct: 213 RDESAHMEFAFESVRVVREEEPDLFDDEMKQQVYDMLAEAIECEVQFAEDVLSGGVAGIS 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY+Q  A++   ++G+E  +    NP P+M E+ D+++  NFFE RV+ YQ G +
Sbjct: 273 TRDMRQYLQHCADQHFAKLGMEKKYN-VRNPLPFM-ELQDVQELTNFFERRVSAYQVGVQ 330


>gi|68171256|ref|ZP_00544659.1| Ribonucleoside-diphosphate reductase [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67999338|gb|EAM85984.1| Ribonucleoside-diphosphate reductase [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 294

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58
           +RDE+LH    I + N    EN  +W    +Q+    L+EA  + ++   E +   F   
Sbjct: 162 VRDETLHTESIIRLFNTFIQENYEIWDDSLKQE----LYEACRIIVSLEDEFINLAFACG 217

Query: 59  ---GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL++   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NFFE RVTE
Sbjct: 218 DVEGLSSKEVKEYIRYIANRRLLQLNLEPIYDTNKNPLLWLDEILNGVEHTNFFENRVTE 277

Query: 116 YQQGA 120
           Y + A
Sbjct: 278 YARAA 282


>gi|88658048|ref|YP_507564.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           chaffeensis str. Arkansas]
 gi|88599505|gb|ABD44974.1| ribonucleoside-diphosphate reductase, beta subunit [Ehrlichia
           chaffeensis str. Arkansas]
          Length = 324

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58
           +RDE+LH    I + N    EN  +W    +Q+    L+EA  + ++   E +   F   
Sbjct: 192 VRDETLHTESIIRLFNTFIQENYEIWDDSLKQE----LYEACRIIVSLEDEFINLAFACG 247

Query: 59  ---GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL++   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NFFE RVTE
Sbjct: 248 DVEGLSSKEVKEYIRYIANRRLLQLNLEPIYDTNKNPLLWLDEILNGVEHTNFFENRVTE 307

Query: 116 YQQGA 120
           Y + A
Sbjct: 308 YARAA 312


>gi|58040422|ref|YP_192386.1| ribonucleotide-diphosphate reductase subunit beta [Gluconobacter
           oxydans 621H]
 gi|58002836|gb|AAW61730.1| Ribonucleoside-diphosphate reductase beta chain [Gluconobacter
           oxydans 621H]
          Length = 339

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 1/121 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDE+LH    I +      EN  +WT EF+++   +       E A+       G V G
Sbjct: 204 VRDETLHCLSMIRLFRTFVRENSEIWTPEFREELTQICRTTVEHEDAFIDLCFEMGPVEG 263

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +++   ++Y++FIA+RR  Q+GL+P++    NP PW+ ++++  +  NFFE R TEY + 
Sbjct: 264 MSSEDVKRYIRFIADRRLTQLGLDPVYGQESNPLPWIDDMLNAVEHANFFENRSTEYSRA 323

Query: 120 A 120
           +
Sbjct: 324 S 324


>gi|57239055|ref|YP_180191.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Welgevonden]
 gi|15811135|gb|AAL08816.1|AF308664_1 hypothetical ribonucleoside reductase beta chain [Ehrlichia
           ruminantium]
 gi|57161134|emb|CAH58047.1| putative ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Welgevonden]
          Length = 324

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58
           +RDE+LH    I + N    EN  +W  + +++    L+EA  + +    E +   F   
Sbjct: 192 VRDETLHTESIIRLFNTFIQENYEIWDDDLKKE----LYEACSVIVTLEDEFINLAFACG 247

Query: 59  ---GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL+A   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NFFE RVTE
Sbjct: 248 DVEGLSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNFFENRVTE 307

Query: 116 YQQGA 120
           Y + A
Sbjct: 308 YTRAA 312


>gi|58578998|ref|YP_197210.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Welgevonden]
 gi|58417624|emb|CAI26828.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Welgevonden]
          Length = 329

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58
           +RDE+LH    I + N    EN  +W  + +++    L+EA  + +    E +   F   
Sbjct: 197 VRDETLHTESIIRLFNTFIQENYEIWDDDLKKE----LYEACSVIVTLEDEFINLAFACG 252

Query: 59  ---GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL+A   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NFFE RVTE
Sbjct: 253 DVEGLSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNFFENRVTE 312

Query: 116 YQQGA 120
           Y + A
Sbjct: 313 YTRAA 317


>gi|187932511|ref|YP_001884520.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           botulinum B str. Eklund 17B]
 gi|187720664|gb|ACD21885.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B str. Eklund 17B]
          Length = 344

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 2/123 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ ENP  +T + + + R M+H     EI + H  +     G+N
Sbjct: 218 RDENTHLWLFRNIIKELQSENPESFTADLKNELREMMHIGVENEILWGHYVIGDKIQGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E Y++++ N+R  +IGLEPLF  Y ENP  W+  V +    K +FFE + T Y + 
Sbjct: 278 KKLIEDYIKYLGNKRLKEIGLEPLFSGYEENPATWVDVVANSNSVKTDFFEAKSTAYAKV 337

Query: 120 AEL 122
           + L
Sbjct: 338 STL 340


>gi|194363985|ref|YP_002026595.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
           R551-3]
 gi|194346789|gb|ACF49912.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
           R551-3]
          Length = 339

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H++F  + ++ I+ E P L+  + +Q    ML EA   E+ +A + +  G  G++
Sbjct: 213 RDESAHMDFAFECVDVIREEEPDLFDDKMKQDVYDMLAEAIECEVQFAEDVLSGGVAGIS 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY+Q  A+   H++G+E  +    NP  +M E+ D+++  NFFE R + YQ G +
Sbjct: 273 TRDMRQYLQHCADNHFHRLGMERKYN-VRNPLSFM-ELQDVQELTNFFERRASAYQVGVQ 330


>gi|73666936|ref|YP_302952.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia canis
           str. Jake]
 gi|72394077|gb|AAZ68354.1| Ribonucleoside-diphosphate reductase [Ehrlichia canis str. Jake]
          Length = 324

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58
           +RDE+LH    I + N    EN  +W    + +    L+EA  + ++   E +   F   
Sbjct: 192 VRDETLHTESIIRLFNTFVQENYEIWDDSLKHE----LYEACKIIVSLEDEFINLAFACG 247

Query: 59  ---GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL+A   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NFFE RVTE
Sbjct: 248 DVEGLSAKEVKKYIRYIANRRLLQLNLEPIYDANKNPLLWLDEILNGVEHTNFFENRVTE 307

Query: 116 YQQGA 120
           Y + A
Sbjct: 308 YARAA 312


>gi|58617056|ref|YP_196255.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Gardel]
 gi|58416668|emb|CAI27781.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Gardel]
          Length = 329

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58
           +RDE+LH    I + N    EN  +W  + +++    L+EA  + +    E +   F   
Sbjct: 197 VRDETLHTESIIRLFNTFIQENYEIWDGDLKKE----LYEACSVIVTLEDEFINLAFACG 252

Query: 59  ---GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL+A   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NFFE RVTE
Sbjct: 253 DVEGLSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNFFENRVTE 312

Query: 116 YQQGA 120
           Y + A
Sbjct: 313 YTRAA 317


>gi|108763495|ref|YP_633213.1| ribonucleoside-diphosphate reductase subunit beta [Myxococcus
           xanthus DK 1622]
 gi|108467375|gb|ABF92560.1| ribonucleoside-diphosphate reductase, beta subunit [Myxococcus
           xanthus DK 1622]
          Length = 349

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 2/116 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F  + I   + E P L+  + ++    ML EA   E  +A + +  G +GL+
Sbjct: 219 RDESAHMAFAFESIQVARKEEPDLFDAQMERDVVAMLREAVECETQFAQDLLSGGVMGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                 Y++++A++R   +G+ P+F  T+NP  +M ++ D+++  NFFE RV+ YQ
Sbjct: 279 VQDMRGYLEYVADQRLQMLGMTPVFG-TKNPLHFM-DLQDVQELTNFFERRVSSYQ 332


>gi|291303011|ref|YP_003514289.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290572231|gb|ADD45196.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 338

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 2/116 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+NF   V++ ++ E P L+  E  +    M+ EA   E+ +A +   +G  G+ 
Sbjct: 212 RDESCHMNFAFSVVDVVRNEEPELFDDELTEAVTRMIEEAVAAELQFARDLCGEGMPGMT 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
               + Y++++A++R  ++G+ P+   ++NPF +M+ + D+++  NFFE R T YQ
Sbjct: 272 VNDMKSYLEYVADQRLTRLGM-PVRYGSKNPFGFMA-LQDVQELTNFFERRPTAYQ 325


>gi|225432510|ref|XP_002279943.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 340

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P  W     QK   ++HEA  +E  +  E +P   +G+N
Sbjct: 212 RDEGLHCDFACLLYSLLQKQLP--W-----QKVHHIVHEAVEIETQFVCEALPCALIGMN 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +   ENPF WM E I L+ + NFFE RV +YQ+ +
Sbjct: 265 ATLMSQYIKFVADRLLVALGYERKYN-VENPFDWM-EFISLQGKANFFERRVGDYQKAS 321


>gi|226950223|ref|YP_002805314.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A2 str. Kyoto]
 gi|226843961|gb|ACO86627.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A2 str. Kyoto]
          Length = 342

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K ENPH++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENPHIFTEELEEEFRQMMRIGVEHEIQWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++++N R   IGL+PL+ +  ++P  W+     L   K +FFE +VT Y + 
Sbjct: 274 DELIEKYIKYLSNLRLVAIGLKPLYLEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|224000239|ref|XP_002289792.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975000|gb|EED93329.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 335

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 73/119 (61%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +++K+       K  Q++ +T+++EA  +E ++  + +P   +G+N
Sbjct: 197 RDEGLHCSFACQLYSKLKL-------KLSQEEIQTIINEAVDVEKSFICDALPVSLIGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G + ++  ++NPF WM ++I L+ + NFFE RV EYQ+  
Sbjct: 250 SRLMAQYIEFVADRMLTDLGYQAMYG-SKNPFDWM-DMISLEGKTNFFEKRVGEYQKSG 306


>gi|162452149|ref|YP_001614516.1| ribonucleotide-diphosphate reductase [Sorangium cellulosum 'So ce
           56']
 gi|161162731|emb|CAN94036.1| Ribonucleotide-diphosphate reductase [Sorangium cellulosum 'So ce
           56']
          Length = 339

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 2/118 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES H+ F  +V++  + E P L+     +    M+ EA   E  +A + +  G  G++
Sbjct: 213 RDESAHMRFAFEVVSTARREEPELFDAGLARSILDMMDEAIACEARFAEDLLGAGVAGMS 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           A    +Y++F A++R   +G+   +   +NPF +M ++ D+++  NFFE RV+ YQ G
Sbjct: 273 ARDVRRYLEFCADQRLATLGMPKRYG-AKNPFSFM-DLQDVQEVTNFFERRVSAYQVG 328


>gi|15229476|ref|NP_189000.1| RNR2A (RIBONUCLEOTIDE REDUCTASE 2A); ribonucleoside-diphosphate
           reductase [Arabidopsis thaliana]
 gi|27735240|sp|P50651|RIR2A_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain A;
           AltName: Full=Ribonucleoside-diphosphate reductase R2A
           subunit; Short=AtRNR2; Short=Protein R2at; AltName:
           Full=Ribonucleotide reductase small subunit A
 gi|13937232|gb|AAK50108.1|AF372971_1 AT3g23580/MDB19_7 [Arabidopsis thaliana]
 gi|9294514|dbj|BAB02776.1| ribonucleotide reductase [Arabidopsis thaliana]
 gi|23505945|gb|AAN28832.1| At3g23580/MDB19_7 [Arabidopsis thaliana]
          Length = 341

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P        +K   ++HEA  +E  +  + +P   +G+N
Sbjct: 212 RDEGLHCDFACLLYSLLQKQLPL-------EKVYQIVHEAVEIETEFVCKALPCDLIGMN 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY+QF+A+R    +G E  +K  ENPF WM E I L+ + NFFE RV EYQ+ +
Sbjct: 265 SNLMSQYIQFVADRLLVTLGCERTYK-AENPFDWM-EFISLQGKTNFFEKRVGEYQKAS 321


>gi|297831106|ref|XP_002883435.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
 gi|297329275|gb|EFH59694.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
          Length = 341

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P        +K   ++HEA  +E  +  + +P   +G+N
Sbjct: 212 RDEGLHCDFACLLYSLLQKQLPL-------EKVYQIVHEAVEIETEFVCKALPCDLIGMN 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY+QF+A+R    +G E  +K  ENPF WM E I L+ + NFFE RV EYQ+ +
Sbjct: 265 SNLMSQYIQFVADRLLVTLGCERRYK-AENPFDWM-EFISLQGKTNFFEKRVGEYQKAS 321


>gi|219110949|ref|XP_002177226.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411761|gb|EEC51689.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 409

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 17/121 (14%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLH----EATLLEIAYAHETMPKGF 57
           RDE LH +F              L++K  ++ S T +H    EA  +E  +  + +P G 
Sbjct: 278 RDEGLHCSFAC-----------QLYSKLERKLSETDMHKLIGEAVEVEKGFVCDALPVGL 326

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           +G+NA    QY++F+A+R  H +G   L+  ++NPF WM ++I L+ + NFFE RV EYQ
Sbjct: 327 IGMNASLMSQYVEFVADRLLHDLGYRTLYG-SKNPFDWM-DMISLEGKTNFFEKRVGEYQ 384

Query: 118 Q 118
           +
Sbjct: 385 K 385


>gi|313894221|ref|ZP_07827786.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           oral taxon 158 str. F0412]
 gi|313441045|gb|EFR59472.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           oral taxon 158 str. F0412]
          Length = 342

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I +++ E P L+T E ++K   M+ + T  EIA+         +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEEKITDMIRQGTENEIAWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y++++AN R   IGL  L+ +  +NP  W+    +L   K +FFE +VT Y + 
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|225012154|ref|ZP_03702591.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-2A]
 gi|225003709|gb|EEG41682.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-2A]
          Length = 325

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 68/121 (56%), Gaps = 8/121 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + N HL  K    + + +L +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGVHCDFAV------HLHNHHLVNKVPPARIKEILLDALTIEREFITESLPISLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+ +R   ++GLE  F  T NPF +M ++I L+ + NFFE RV EYQ+   
Sbjct: 252 AKLMTQYLEFVTDRLLQELGLEKEFNVT-NPFDFM-DMISLQGKTNFFEKRVGEYQKAGV 309

Query: 122 L 122
           L
Sbjct: 310 L 310


>gi|182419335|ref|ZP_02950587.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum 5521]
 gi|237666940|ref|ZP_04526925.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182376666|gb|EDT74238.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum 5521]
 gi|237658139|gb|EEP55694.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 344

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 2/123 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ EN  L+T+E + + R M+      EI + H  +     G+N
Sbjct: 218 RDENTHLWLFRNIIKELQNENAELFTEEIKNELREMMKTGVEQEILWGHYVIGDKIQGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y++++ N+R  +I LEPLF+ +  NP PW+    +    K +FFE R T Y + 
Sbjct: 278 KKLIEEYIKYLGNKRLKEINLEPLFEGHDVNPAPWVDRQSNANSVKTDFFEARSTAYAKA 337

Query: 120 AEL 122
           A L
Sbjct: 338 ATL 340


>gi|229827460|ref|ZP_04453529.1| hypothetical protein GCWU000182_02849 [Abiotrophia defectiva ATCC
           49176]
 gi|229788398|gb|EEP24512.1| hypothetical protein GCWU000182_02849 [Abiotrophia defectiva ATCC
           49176]
          Length = 354

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++  ENP ++T E + + R M+   TL EI +         +G+N
Sbjct: 226 RDEITHLVLFQNIIRELMKENPEIFTDELKGELREMVKVGTLNEIEWGQYVTNNEILGIN 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++++N R   IGL   F + TENP  W+    +L   K +FFE +VT Y + 
Sbjct: 286 NELIERYIKYLSNLRLRAIGLPVWFPEITENPMAWIESFSNLNATKTDFFEAKVTNYTKA 345

Query: 120 AELKWD 125
           A   +D
Sbjct: 346 AAFDFD 351


>gi|148284015|ref|YP_001248105.1| ribonucleotide-diphosphate reductase subunit beta [Orientia
           tsutsugamushi str. Boryong]
 gi|146739454|emb|CAM79093.1| ribonucleoside-diphosphate reductase beta chain [Orientia
           tsutsugamushi str. Boryong]
          Length = 329

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 74/133 (55%), Gaps = 14/133 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSR------TMLH-EATLLEIAYAHETM 53
           +RDE+LH N  I +      E P +WT+  Q KSR      T++H E   +++A+     
Sbjct: 189 VRDETLHTNSIITLFKTFIQEYPEVWTE--QLKSRIYEACCTIIHFEDAFIDLAFE---- 242

Query: 54  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113
             G  GL A   ++Y+++IA+RR  Q+GL+  +   +NP  W+ ++++  +  NFFE RV
Sbjct: 243 VGGVEGLEARDVKKYIRYIADRRLLQLGLKENYLIEQNPLTWLDQILNGVEHTNFFENRV 302

Query: 114 TEYQQGAEL-KWD 125
           TEY + A    WD
Sbjct: 303 TEYTRSATTGSWD 315


>gi|152989800|ref|YP_001355522.1| ribonucleotide-diphosphate reductase subunit beta [Nitratiruptor
           sp. SB155-2]
 gi|151421661|dbj|BAF69165.1| ribonucleoside-diphosphate reductase, beta subunit [Nitratiruptor
           sp. SB155-2]
          Length = 341

 Score = 74.7 bits (182), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN +K E P L+TKE       M   A  LE ++         +GL 
Sbjct: 217 RDEVTHLLIFQNMINTVKKERPELFTKELIDDVYKMFEGAVDLETSWGKYITQGQILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY++++A+ R  ++GLEP++   E+P  W+ +      +K NFFE  VT Y +G+
Sbjct: 277 DEIIEQYIKYLADDRLKRVGLEPMYN-VEHPIKWVDDFSKFNDQKTNFFEGNVTNYSKGS 335


>gi|294794440|ref|ZP_06759576.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           3_1_44]
 gi|294454770|gb|EFG23143.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           3_1_44]
          Length = 342

 Score = 74.7 bits (182), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I +++ E P L+T E + K   M+ + T  EIA+         +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGTENEIAWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y++++AN R   IGL  L+ +  +NP  W+    +L   K +FFE +VT Y + 
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|189184364|ref|YP_001938149.1| ribonucleotide-diphosphate reductase subunit beta [Orientia
           tsutsugamushi str. Ikeda]
 gi|189181135|dbj|BAG40915.1| ribonucleoside-diphosphate reductase beta chain [Orientia
           tsutsugamushi str. Ikeda]
          Length = 359

 Score = 74.7 bits (182), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 74/133 (55%), Gaps = 14/133 (10%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSR------TMLH-EATLLEIAYAHETM 53
           +RDE+LH N  I +      E P +WT+  Q KSR      T++H E   +++A+     
Sbjct: 204 VRDETLHTNSIITLFKTFIQEYPEVWTE--QLKSRIYEACCTIIHFEDAFIDLAFE---- 257

Query: 54  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113
             G  GL A   ++Y+++IA+RR  Q+GL+  +   +NP  W+ ++++  +  NFFE RV
Sbjct: 258 VGGVEGLEARDVKKYIRYIADRRLLQLGLKENYLIEQNPLTWLDQILNGVEHTNFFENRV 317

Query: 114 TEYQQGAEL-KWD 125
           TEY + A    WD
Sbjct: 318 TEYTRSATTGSWD 330


>gi|152993970|ref|YP_001359691.1| ribonucleotide-diphosphate reductase subunit beta [Sulfurovum sp.
           NBC37-1]
 gi|151425831|dbj|BAF73334.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp.
           NBC37-1]
          Length = 339

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN  K E P L+TKE       M  +A  LE  +         +GL 
Sbjct: 215 RDEVTHLLLFQNMINATKRERPELFTKELIDDVYQMFRDAVKLECEWGTYITQGQILGLT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY+Q++A++R H +GLE ++   E+P  W+        +K NFFE  VT Y +G+
Sbjct: 275 NEIIEQYIQYLADKRLHAVGLEKIYN-VEHPIKWVDNFSQFNDQKTNFFEGNVTNYSKGS 333


>gi|212723480|ref|NP_001131892.1| hypothetical protein LOC100193273 [Zea mays]
 gi|194692834|gb|ACF80501.1| unknown [Zea mays]
 gi|195624040|gb|ACG33850.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++       +K  + + RT++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYDVLR-------SKLDEARVRTIVADAVDIEREFVCDALPVSLVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++  T NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 262 GDLMSQYIEFVADRLLMALGCKKMYNVT-NPFDWM-ELISLQGKTNFFEKRVGDYQKAS 318


>gi|254374389|ref|ZP_04989871.1| glutaredoxin [Francisella novicida GA99-3548]
 gi|151572109|gb|EDN37763.1| glutaredoxin [Francisella novicida GA99-3548]
          Length = 410

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDKFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 119 GAELKWD 125
           G    WD
Sbjct: 399 GLTGSWD 405


>gi|118497575|ref|YP_898625.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. novicida
           U112]
 gi|195536272|ref|ZP_03079279.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella tularensis subsp. novicida FTE]
 gi|208779374|ref|ZP_03246720.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella novicida FTG]
 gi|254372936|ref|ZP_04988425.1| hypothetical protein FTCG_00507 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|118423481|gb|ABK89871.1| bifunctional protein: glutaredoxin 3 /ribonucleotide reductase beta
           subunit [Francisella novicida U112]
 gi|151570663|gb|EDN36317.1| hypothetical protein FTCG_00507 [Francisella novicida GA99-3549]
 gi|194372749|gb|EDX27460.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella tularensis subsp. novicida FTE]
 gi|208745174|gb|EDZ91472.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella novicida FTG]
          Length = 410

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDKFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 119 GAELKWD 125
           G    WD
Sbjct: 399 GLTGSWD 405


>gi|148676854|gb|EDL08801.1| ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
          Length = 297

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  + + R ++ +A  +E  +  E +P G +G+N
Sbjct: 172 RDEGLHCDFACLMFQ-------YLVNKPSEDRVREIIADAVQIEQEFLTEALPVGLIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 225 CVLMKQYIEFVADRLLGELGFSKIFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 281


>gi|57339646|gb|AAW49810.1| hypothetical protein FTT0532 [synthetic construct]
          Length = 445

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G + G
Sbjct: 305 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 364

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 365 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 424

Query: 119 GAELKWD 125
           G    WD
Sbjct: 425 GLTGSWD 431


>gi|330814259|ref|YP_004358498.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487354|gb|AEA81759.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Candidatus Pelagibacter sp. IMCC9063]
          Length = 345

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTML-HEATLLEIAYAHETMPK 55
           +RDE+LH N  I + N    ENP L      KE  +   T++ HE   +++A+    +  
Sbjct: 212 VRDETLHCNSMIKIFNTFCDENPGLLDDSLKKEIYEACSTIIEHEDAFIDLAFEMGDIE- 270

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL A   ++Y+++IANRR  Q+ L  L++  ENP  W+ ++++  +  NFFE R TE
Sbjct: 271 ---GLKAEEVKKYIRWIANRRLAQLRLNDLYEVKENPLTWLDDMLNGVEHMNFFEGRATE 327

Query: 116 YQQGA 120
           Y + +
Sbjct: 328 YSKAS 332


>gi|15896521|ref|NP_349870.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           acetobutylicum ATCC 824]
 gi|15026352|gb|AAK81210.1|AE007823_4 Ribonucleotide reductase beta subunit [Clostridium acetobutylicum
           ATCC 824]
 gi|325510679|gb|ADZ22315.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           acetobutylicum EA 2018]
          Length = 344

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 2/123 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P ++T+E +++ + M+      EI + H  +     G+N
Sbjct: 218 RDENTHLWLFRNIIKELQKEEPDMFTEEIKKELKDMVKTGVENEITWGHYVIGDNIQGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E Y++++ NRR   IG EP+++ Y ENP  W+    D    K +FFE + T Y + 
Sbjct: 278 KKLIEDYIKYLGNRRLEAIGFEPIYEGYDENPALWVDIYADANSVKTDFFEAKSTAYAKA 337

Query: 120 AEL 122
           + L
Sbjct: 338 STL 340


>gi|163753569|ref|ZP_02160692.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
           algicida OT-1]
 gi|161325783|gb|EDP97109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
           algicida OT-1]
          Length = 326

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 70/121 (57%), Gaps = 8/121 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + N HL  K  +++ R ++ +A  +E  +  E++P   +G+N
Sbjct: 199 RDEGVHCDFAV------HLHNNHLVNKVPKERIRAIIVDALNIEREFITESLPVSLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+ +R   ++G E  +  + NPF +M ++I L+ + NFFE RV+EYQ+   
Sbjct: 253 AKLMTQYLEFVTDRLLQELGCEKEYNVS-NPFDFM-DMISLQGKTNFFEKRVSEYQKAGV 310

Query: 122 L 122
           L
Sbjct: 311 L 311


>gi|254369307|ref|ZP_04985319.1| hypothetical protein FTAG_00272 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122257|gb|EDO66397.1| hypothetical protein FTAG_00272 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 410

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 119 GAELKWD 125
           G    WD
Sbjct: 399 GLTGSWD 405


>gi|89256330|ref|YP_513692.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314778|ref|YP_763501.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156502403|ref|YP_001428469.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010840|ref|ZP_02275771.1| ribonucleotide-diphosphate reductase beta subunit [Francisella
           tularensis subsp. holarctica FSC200]
 gi|254367665|ref|ZP_04983686.1| biofunctional protein: glutaredoxin 3
           protein-ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica 257]
 gi|290952877|ref|ZP_06557498.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313922|ref|ZP_06804487.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           URFT1]
 gi|89144161|emb|CAJ79423.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica LVS]
 gi|115129677|gb|ABI82864.1| ribonucleoside-diphosphate reductase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134253476|gb|EBA52570.1| biofunctional protein: glutaredoxin 3
           protein-ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica 257]
 gi|156253006|gb|ABU61512.1| bifunctional glutaredoxin /ribonucleoside-diphosphate reductase
           beta subunit [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 410

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 119 GAELKWD 125
           G    WD
Sbjct: 399 GLTGSWD 405


>gi|56707665|ref|YP_169561.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670136|ref|YP_666693.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           FSC198]
 gi|187931834|ref|YP_001891819.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|224456732|ref|ZP_03665205.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370173|ref|ZP_04986179.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874478|ref|ZP_05247188.1| nrdB, biofunctional protein, glutaredoxin 3
           protein/ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56604157|emb|CAG45165.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110320469|emb|CAL08548.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568417|gb|EDN34071.1| hypothetical protein FTBG_01287 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|187712743|gb|ACD31040.1| bifunctional protein: glutaredoxin 3/ribonucleotide reductase beta
           subunit [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|254840477|gb|EET18913.1| nrdB, biofunctional protein, glutaredoxin 3
           protein/ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158827|gb|ADA78218.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 410

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 119 GAELKWD 125
           G    WD
Sbjct: 399 GLTGSWD 405


>gi|262277047|ref|ZP_06054840.1| ribonucleoside-diphosphate reductase, beta subunit [alpha
           proteobacterium HIMB114]
 gi|262224150|gb|EEY74609.1| ribonucleoside-diphosphate reductase, beta subunit [alpha
           proteobacterium HIMB114]
          Length = 342

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 9/125 (7%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTML-HEATLLEIAYAHETMPK 55
           +RDE+LH N  I + N    ENP L      KE     RT++ HE   +++A+  E  P 
Sbjct: 209 VRDETLHCNSMIKIFNTFCAENPGLLDESLKKEITDACRTIVEHEDAFIDLAF--EMGP- 265

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
              GL A   + Y+++IANRR  Q+ L+ ++   ENP  W+  +++  +  NFFE R TE
Sbjct: 266 -IEGLTAQQIKDYIRWIANRRLVQLKLDEIYDVKENPLEWIDTMLNGVEHMNFFEGRATE 324

Query: 116 YQQGA 120
           Y + +
Sbjct: 325 YSKAS 329


>gi|134301991|ref|YP_001121960.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134049768|gb|ABO46839.1| biofunctional glutaredoxin 3 protein/Ribonucleoside-diphosphate
           reductase beta subunit [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 410

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H+     +      ENP++   EF+++   M  +A  LE  +       G + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 119 GAELKWD 125
           G    WD
Sbjct: 399 GLTGSWD 405


>gi|153940168|ref|YP_001392091.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum F str. Langeland]
 gi|170756361|ref|YP_001782419.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B1 str. Okra]
 gi|152936064|gb|ABS41562.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum F str. Langeland]
 gi|169121573|gb|ACA45409.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B1 str. Okra]
 gi|322807123|emb|CBZ04697.1| ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Clostridium botulinum H04402 065]
          Length = 342

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K EN H++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRMGVEHEIQWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++++N R   IGL+PL+ +  ++P  W+     L   K +FFE +VT Y + 
Sbjct: 274 DELIEKYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|146298285|ref|YP_001192876.1| ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
           UW101]
 gi|146152703|gb|ABQ03557.1| Ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
           UW101]
          Length = 325

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + N HL  K  +++ + ++ +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGVHCDFAV------HLHNHHLVNKVPKERIKEIIVDALDIERQFVTESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++G E ++  + NPF +M ++I L+ + NFFE RV EYQ+   
Sbjct: 252 AGLMTQYLEFVADRLLVELGCERVYG-SANPFDFM-DMISLQGKTNFFEKRVAEYQKSGV 309

Query: 122 LKWD 125
           +  D
Sbjct: 310 MNTD 313


>gi|282849773|ref|ZP_06259157.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           parvula ATCC 17745]
 gi|282580710|gb|EFB86109.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           parvula ATCC 17745]
          Length = 342

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I +++ E P L+T E + K   M+ +    EIA+         +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y++++AN R   IGL  L+ +  ENP  W+    +L   K +FFE +VT Y + 
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKENPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|51891459|ref|YP_074150.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium
           thermophilum IAM 14863]
 gi|51855148|dbj|BAD39306.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium
           thermophilum IAM 14863]
          Length = 346

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 1/125 (0%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+    +++N ++ E P L+T +     R M+ +A   E+A+A   +     GL+
Sbjct: 220 RDEITHVAVFQNILNGLRQERPQLFTPQLDADLRAMIRQAAEHEMAWAAYCVGNRIQGLS 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               + Y++ +A++R   +G EPL+    NP  W+    +L + K +FFETRVT Y +  
Sbjct: 280 GEVLQGYVKHLADQRARALGFEPLYGNHPNPIKWVESFSNLNQTKADFFETRVTNYAKST 339

Query: 121 ELKWD 125
            +  D
Sbjct: 340 NIDLD 344


>gi|41054952|ref|NP_955770.1| ribonucleoside-diphosphate reductase subunit M2 B [Mus musculus]
 gi|81885688|sp|Q6PEE3|RIR2B_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
           AltName: Full=TP53-inducible ribonucleotide reductase M2
           B; AltName: Full=p53-inducible ribonucleotide reductase
           small subunit 2-like protein; Short=p53R2
 gi|34786000|gb|AAH58103.1| Ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
 gi|74218244|dbj|BAE23760.1| unnamed protein product [Mus musculus]
          Length = 351

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  + + R ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEDRVREIIADAVQIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CVLMKQYIEFVADRLLGELGFSKIFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335


>gi|114799612|ref|YP_759103.1| ribonucleotide-diphosphate reductase subunit beta [Hyphomonas
           neptunium ATCC 15444]
 gi|114739786|gb|ABI77911.1| ribonucleoside-diphosphate reductase, beta subunit [Hyphomonas
           neptunium ATCC 15444]
          Length = 345

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + +    E   + T E +++ R        LE  +       G V G
Sbjct: 197 IRDESLHCEGMIKLFHSFCAETGVM-TDELRERIRDCCRTVVALEDKFIELAFEMGPVEG 255

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           + A   + Y+++IA+ R +Q+ LEP++  T++P PW++E+++  +  NFFE R TEY +G
Sbjct: 256 MTADDIKNYIRYIADWRLNQLKLEPIYGVTKHPIPWLTEILNGVEHANFFEQRSTEYSKG 315

Query: 120 A 120
           A
Sbjct: 316 A 316


>gi|168184457|ref|ZP_02619121.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Bf]
 gi|237796249|ref|YP_002863801.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           botulinum Ba4 str. 657]
 gi|182672468|gb|EDT84429.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Bf]
 gi|229263158|gb|ACQ54191.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Ba4 str. 657]
          Length = 342

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K EN H++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRIGVEHEIQWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++++N R   IGL+PL+ +  ++P  W+     L   K +FFE +VT Y + 
Sbjct: 274 DELIERYIKYLSNLRLVAIGLKPLYLEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|322510876|gb|ADX06189.1| putative ribonucleotide reductase small subunit [Organic Lake
           phycodnavirus 2]
          Length = 324

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 71/116 (61%), Gaps = 9/116 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+LH  F + + N+++        K  ++K R ++ EA  +E  +  + +P   +G+N
Sbjct: 201 RDEALHTEFAVYLYNRLE-------KKLNKKKVREIIEEAVTIEKEFIVDALPCRMIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           +    QY++F+A+R   Q+G + ++  T NPF +M E+I L+++ NFFE+RV+EY 
Sbjct: 254 SELMTQYIEFVADRLMMQLGCDVIYA-TNNPFDFM-ELISLEQKTNFFESRVSEYS 307


>gi|168179222|ref|ZP_02613886.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum NCTC 2916]
 gi|182669722|gb|EDT81698.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum NCTC 2916]
          Length = 342

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K EN H++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRIGVEHEIQWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++++N R   IGL+PL+ +  ++P  W+     L   K +FFE +VT Y + 
Sbjct: 274 DELIERYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|27769295|gb|AAH42468.1| Similar to ribonucleotide reductase M2 polypeptide [Homo sapiens]
          Length = 285

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 160 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 212

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 213 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 269


>gi|150024561|ref|YP_001295387.1| ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
           psychrophilum JIP02/86]
 gi|149771102|emb|CAL42569.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
           psychrophilum JIP02/86]
          Length = 325

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + N HL  K  +++ R+++ +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGVHCDFAV------HLHNHHLVNKVPKERIRSIIVDALNIEREFITESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++G +  +  T NPF +M ++I L+ + NFFE +V EYQ+   
Sbjct: 252 AVLMTQYLEFVADRLLVELGCDREYN-TANPFDFM-DMISLQGKTNFFEKKVAEYQKAGV 309

Query: 122 LKWD 125
           +  D
Sbjct: 310 MNTD 313


>gi|319942042|ref|ZP_08016361.1| ribonucleoside-diphosphate reductase subunit beta [Sutterella
           wadsworthensis 3_1_45B]
 gi|319804426|gb|EFW01304.1| ribonucleoside-diphosphate reductase subunit beta [Sutterella
           wadsworthensis 3_1_45B]
          Length = 344

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 10/125 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           + DE+LH      +  +   ENP LWT E + K    +  M+  E   +++A+    M +
Sbjct: 211 IADETLHTESMTKIFREYITENPELWTDELKAKIYGIAEVMVDLEDKFIDLAFGVSEMKR 270

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
               L       Y+++IA+RR   +GL+ +FK T NP PW+  ++ +    NFFE RV +
Sbjct: 271 ----LTREDVRSYIRYIADRRLMGLGLKGIFKSTTNPLPWVDAMLGV-THTNFFENRVVD 325

Query: 116 YQQGA 120
           Y +GA
Sbjct: 326 YAKGA 330


>gi|114621164|ref|XP_001153859.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
 gi|119612248|gb|EAW91842.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_c [Homo
           sapiens]
 gi|194385642|dbj|BAG65196.1| unnamed protein product [Homo sapiens]
          Length = 297

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 172 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 225 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 281


>gi|289177076|ref|NP_001165949.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 3 [Homo
           sapiens]
 gi|55631160|ref|XP_528204.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) isoform 3
           [Pan troglodytes]
 gi|42794058|dbj|BAD11774.1| p53-inducible ribonucleotide reductase small subunit 2 long form
           [Homo sapiens]
 gi|119612246|gb|EAW91840.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_a [Homo
           sapiens]
          Length = 299

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 174 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 226

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 227 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 283


>gi|75076588|sp|Q4R741|RIR2B_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
 gi|67969468|dbj|BAE01083.1| unnamed protein product [Macaca fascicularis]
          Length = 351

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVQIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CILMKQYIEFVADRLLVELGFSKIFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335


>gi|195953600|ref|YP_002121890.1| Ribonucleoside-diphosphate reductase [Hydrogenobaculum sp. Y04AAS1]
 gi|195933212|gb|ACG57912.1| Ribonucleoside-diphosphate reductase [Hydrogenobaculum sp. Y04AAS1]
          Length = 319

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 68/114 (59%), Gaps = 6/114 (5%)

Query: 1   MRDESLHLNFGIDVINQI-KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           ++DE+ HL FGI ++N++ K +N +    +++ K R ++ EA  +E  YA   MP+  +G
Sbjct: 209 LKDETRHLAFGIYLLNELLKDKNKN----DYKDKFRVLMEEAVDIETEYARVAMPEKIIG 264

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113
           L+  +   Y++++A+RR   +G + ++   +NP  W++   DL    NFFE +V
Sbjct: 265 LSFETYTSYVKYLADRRMRSLGFDAIYG-QKNPMKWLTTQTDLPDLTNFFEAKV 317


>gi|197101489|ref|NP_001125944.1| ribonucleoside-diphosphate reductase subunit M2 B [Pongo abelii]
 gi|75041724|sp|Q5R9G0|RIR2B_PONAB RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
 gi|55729743|emb|CAH91600.1| hypothetical protein [Pongo abelii]
          Length = 351

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335


>gi|42544136|ref|NP_056528.2| ribonucleoside-diphosphate reductase subunit M2 B isoform 1 [Homo
           sapiens]
 gi|114621161|ref|XP_001153916.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) isoform 2
           [Pan troglodytes]
 gi|74727333|sp|Q7LG56|RIR2B_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
           AltName: Full=TP53-inducible ribonucleotide reductase M2
           B; AltName: Full=p53-inducible ribonucleotide reductase
           small subunit 2-like protein; Short=p53R2
 gi|261278726|pdb|3HF1|A Chain A, Crystal Structure Of Human P53r2
 gi|261278727|pdb|3HF1|B Chain B, Crystal Structure Of Human P53r2
 gi|7229086|dbj|BAA92434.1| ribonucleotide reductase [Homo sapiens]
 gi|7229115|dbj|BAA92493.1| ribonucleotide reductase [Homo sapiens]
 gi|45259569|dbj|BAD12267.1| p53-inducible ribonucleotide reductase small subunit 2 [Homo
           sapiens]
 gi|52545612|emb|CAB70703.2| hypothetical protein [Homo sapiens]
 gi|63055293|gb|AAY29059.1| ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|80473666|gb|AAI08262.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|109659128|gb|AAI17497.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|119612247|gb|EAW91841.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_b [Homo
           sapiens]
 gi|120660296|gb|AAI30629.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|190689549|gb|ACE86549.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
           construct]
 gi|190690911|gb|ACE87230.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
           construct]
 gi|261859014|dbj|BAI46029.1| ribonucleotide reductase M2 B [synthetic construct]
 gi|313882916|gb|ADR82944.1| ribonucleotide reductase M2 B (TP53 inducible) [synthetic
           construct]
          Length = 351

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335


>gi|148380773|ref|YP_001255314.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 3502]
 gi|153932443|ref|YP_001385057.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 19397]
 gi|153934989|ref|YP_001388527.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. Hall]
 gi|148290257|emb|CAL84376.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           botulinum A str. ATCC 3502]
 gi|152928487|gb|ABS33987.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 19397]
 gi|152930903|gb|ABS36402.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. Hall]
          Length = 342

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K EN H++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENLHIFTEELEEEFRQMMRMGVEHEIQWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++++N R   IGL+PL+ +  ++P  W+     L   K +FFE +VT Y + 
Sbjct: 274 DELIEKYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|255551489|ref|XP_002516790.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
 gi|223543878|gb|EEF45404.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
          Length = 342

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQ-QKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   + +        L  K+ Q QK + ++HEA  +E  +  + +P   +G+
Sbjct: 213 RDEGLHCDFACLLYS--------LLQKQLQWQKVQQIVHEAVEIETEFVCDALPCALIGM 264

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N+    QY++F+A+R    +G +  +   ENPF WM E I L+ + NFFE RV +YQ+ +
Sbjct: 265 NSTLMSQYIKFVADRLLVALGYQRKYN-VENPFDWM-EFISLQGKANFFERRVGDYQKAS 322


>gi|170761039|ref|YP_001788131.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169408028|gb|ACA56439.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 342

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K EN H++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRMGVEHEIQWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++++N R   IGL+PL+ +  ++P  W+     L   K +FFE +VT Y + 
Sbjct: 274 DELIERYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDGFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|296227442|ref|XP_002759378.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           isoform 2 [Callithrix jacchus]
          Length = 299

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 174 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 226

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G    F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 227 CILMKQYIEFVADRLLVELGFSKFFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 283


>gi|332184137|gb|AEE26391.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Francisella cf. novicida 3523]
          Length = 410

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H+     +      ENP++   +F+++   M  +A  LE  +       G + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFIELAYELGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118
           L A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 119 GAELKWD 125
           G    WD
Sbjct: 399 GLTGSWD 405


>gi|269798663|ref|YP_003312563.1| ribonucleotide reductase [Veillonella parvula DSM 2008]
 gi|294792661|ref|ZP_06757808.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           6_1_27]
 gi|269095292|gb|ACZ25283.1| ribonucleotide reductase [Veillonella parvula DSM 2008]
 gi|294456560|gb|EFG24923.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           6_1_27]
          Length = 342

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I +++ E P L+T E + K   M+ +    EIA+         +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y++++AN R   IGL  L+ +  +NP  W+    +L   K +FFE +VT Y + 
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|238018468|ref|ZP_04598894.1| hypothetical protein VEIDISOL_00295 [Veillonella dispar ATCC 17748]
 gi|237864939|gb|EEP66229.1| hypothetical protein VEIDISOL_00295 [Veillonella dispar ATCC 17748]
          Length = 342

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I +++ E P L+T E + K   M+ +    EIA+         +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y++++AN R   IGL  L+ +  +NP  W+    +L   K +FFE +VT Y + 
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|7023557|dbj|BAA92005.1| unnamed protein product [Homo sapiens]
          Length = 351

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGVN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335


>gi|303228685|ref|ZP_07315510.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-134-V-Col7a]
 gi|303230495|ref|ZP_07317254.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-049-V-Sch6]
 gi|302514861|gb|EFL56844.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-049-V-Sch6]
 gi|302516665|gb|EFL58582.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-134-V-Col7a]
          Length = 342

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I +++ E P L+T E + K   M+ +    EIA+         +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y++++AN R   IGL  L+ +  +NP  W+    +L   K +FFE +VT Y + 
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|296227440|ref|XP_002759377.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           isoform 1 [Callithrix jacchus]
          Length = 351

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G    F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CILMKQYIEFVADRLLVELGFSKFFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335


>gi|189501948|ref|YP_001957665.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497389|gb|ACE05936.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 355

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++ +A  +E  +  + +P   +G+N
Sbjct: 226 RDEGLHCDFACLLYAN------HLQNKLPEERVREIITDAVAIEKEFVTDALPVKLIGMN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++G   ++  T NPF +M E+I L+ + NFFE RV EYQ+   
Sbjct: 280 ADLMSQYIEFVADRLLLELGCSKVYNAT-NPFDFM-EMISLQGKTNFFEKRVGEYQKAGV 337

Query: 122 LK 123
           +K
Sbjct: 338 MK 339


>gi|288817346|ref|YP_003431693.1| ribonucleotide reductase beta subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|288786745|dbj|BAI68492.1| ribonucleotide reductase beta subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|308750953|gb|ADO44436.1| ribonucleotide reductase [Hydrogenobacter thermophilus TK-6]
          Length = 342

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+    ++I  IK ENP L+T E ++        AT  EI +         +G+N
Sbjct: 218 RDELTHVTLFRNIIQTIKQENPELFTPELEKWVYEFFKYATDAEIKWGQYVTQNQILGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               ++Y++++AN R  Q+G +PL+ + TENP  W+ +   +   K +FF+ +   Y + 
Sbjct: 278 NTLIDRYIKYLANLRLTQLGYKPLYPEITENPMKWIDQFRTINDTKTDFFQAKPQTYAKR 337

Query: 120 AELKW 124
           +ELKW
Sbjct: 338 SELKW 342


>gi|254456975|ref|ZP_05070403.1| ribonucleoside-diphosphate reductase, beta subunit
           [Campylobacterales bacterium GD 1]
 gi|207085767|gb|EDZ63051.1| ribonucleoside-diphosphate reductase, beta subunit
           [Campylobacterales bacterium GD 1]
          Length = 340

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T + +++   M  EA  LE  +         +GL 
Sbjct: 215 RDEVTHLVLFQNLINTLRKERPDLFTDKLKEEVIAMFKEAVQLESEWGKYITQGQILGLT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY++F+A+ R   +G E L+  T NP  W+ +      +K NFFE  VT Y +G+
Sbjct: 275 NDIVEQYIKFLADERLTAVGFEKLYNVT-NPIKWVDDFAKFNDQKTNFFEGTVTNYSKGS 333


>gi|325181522|emb|CCA15972.1| ribonucleosidediphosphate reductase small chain put [Albugo
           laibachii Nc14]
          Length = 1611

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 69/121 (57%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +++  + P       +     ++ +A ++E  +  +++P   +G+N
Sbjct: 264 RDEGLHCDFACLMYSKLVNKLP-------EASIHAIISDAVVIEQEFVRDSLPVELIGMN 316

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R  H +G+  L+ +T NPF WM ++I L+ + NFFE RV EY +   
Sbjct: 317 SSLMGQYIEFVADRLLHALGVSKLY-HTSNPFDWM-DMISLQGKTNFFEKRVGEYAKSGT 374

Query: 122 L 122
           +
Sbjct: 375 I 375


>gi|291388369|ref|XP_002710634.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Oryctolagus cuniculus]
          Length = 339

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 214 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 266

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 267 CILMKQYIEFVADRLLMELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 323


>gi|241166485|ref|XP_002409876.1| ribonucleotide reductase, beta subunit, putative [Ixodes
           scapularis]
 gi|215494664|gb|EEC04305.1| ribonucleotide reductase, beta subunit, putative [Ixodes
           scapularis]
          Length = 376

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  Q + R ++ +A ++E  +  + +P   +G+N
Sbjct: 251 RDEGLHTDFACLMFS-------HLVNKPSQARVRQIICDAVVIEQEFLTDALPVALIGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               ++Y++F+A+R   ++G E ++  +ENPF +M E I L+ + NFFE RV EYQ+  
Sbjct: 304 CELMKRYIEFVADRLLVELGCEKVYN-SENPFDFM-EHISLEGKTNFFEKRVGEYQKAG 360


>gi|289177074|ref|NP_001165948.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 2 [Homo
           sapiens]
          Length = 423

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 298 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 350

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 351 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 407


>gi|327269406|ref|XP_003219485.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Anolis carolinensis]
          Length = 414

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 289 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 341

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 342 CTLMKQYIEFVADRLLLELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 398


>gi|50949848|emb|CAH10473.1| hypothetical protein [Homo sapiens]
          Length = 297

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 172 RDEGLHCDFACLMFQ-------YLVNKPPEERVREIIVDAVKIEQEFLTEALPVGLIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 225 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 281


>gi|256081213|ref|XP_002576867.1| ribonucleoside-diphosphate reductase small chain [Schistosoma
           mansoni]
 gi|238662153|emb|CAZ33104.1| ribonucleoside-diphosphate reductase small chain, putative
           [Schistosoma mansoni]
          Length = 365

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I  + P       +++  +++ EA L+E  +  E +P   +G+N
Sbjct: 237 RDEGLHCDFACLLFKHIIKKPP-------KERVESIIREAVLIEQEFLSEALPVSLIGMN 289

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++FIA+R   ++G E ++ +++NPF +M E I ++ + NFFE RV EYQ+  
Sbjct: 290 CKLMCQYIEFIADRLLVELGYEKMY-HSDNPFDFM-ENISIEGKTNFFEKRVGEYQRAG 346


>gi|1710401|sp|P49730|RIR2_TOBAC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleoside-diphosphate reductase R2
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit
 gi|1044912|emb|CAA63194.1| ribonucleotide reductase R2 [Nicotiana tabacum]
          Length = 329

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++       TK  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 200 RDEGLHCDFACLLYSLLR-------TKLTEERVKGIVADAVEIEREFVCDALPCALVGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                +Y++F+A+R    +G + L+   +NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 253 GDLMSKYIEFVADRLLDALGYDKLYN-AQNPFDWM-ELISLQGKTNFFEKRVGEYQKAS 309


>gi|194673004|ref|XP_607398.4| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|297482473|ref|XP_002692807.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Bos
           taurus]
 gi|296480530|gb|DAA22645.1| ribonucleotide reductase M2 polypeptide-like [Bos taurus]
          Length = 351

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CVLMKQYIEFVADRLLTELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335


>gi|281200507|gb|EFA74725.1| ribonucleotide reductase small subunit [Polysphondylium pallidum
           PN500]
          Length = 335

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 70/124 (56%), Gaps = 13/124 (10%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           RDE LH +F   +  ++  K++N  +          T++ +A   E  +  E++P   +G
Sbjct: 201 RDEGLHCDFACLLYQKLQNKLDNNTI---------ETIIRDAVACEKEFITESLPVDLIG 251

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +N+ S  QY++F A+R    +G + ++  + NPF WM E+I L+++ NFFE +V+EYQ+ 
Sbjct: 252 MNSRSMSQYIEFCADRLLLSLGYKKIYN-SSNPFDWM-EMISLQRKTNFFEGKVSEYQKS 309

Query: 120 AELK 123
              K
Sbjct: 310 GVAK 313


>gi|91215505|ref|ZP_01252476.1| probable ribonucleoside-diphosphate reductase small chain
           [Psychroflexus torquis ATCC 700755]
 gi|91186457|gb|EAS72829.1| probable ribonucleoside-diphosphate reductase small chain
           [Psychroflexus torquis ATCC 700755]
          Length = 326

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + N HL  +  +++ R ++ +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGVHCDFAV------HLHNEHLVNQVPKERIRAIIVDALTIEREFVTESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R   ++G +  +  T NPF +M ++I L+ + NFFE RV EYQ+  
Sbjct: 252 SNLMTQYLEFVADRLLFELGCDKEYG-TANPFDFM-DMISLQGKTNFFEKRVGEYQKAG 308


>gi|290995765|ref|XP_002680453.1| predicted protein [Naegleria gruberi]
 gi|284094074|gb|EFC47709.1| predicted protein [Naegleria gruberi]
          Length = 338

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 68/118 (57%), Gaps = 8/118 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K      +TK  QQ   ++++EA  +E  +  E++P   +G+N
Sbjct: 212 RDEGLHTDFACLLYSTLK------YTKLPQQVVHSLVYEAVEIEKEFISESLPVDLIGMN 265

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +   +QY++ +A+R    IG E ++  + NPF WM+ +I +  + NFFE +V EY + 
Sbjct: 266 SRLMQQYIEMVADRLLVSIGYEKIYN-SSNPFDWMN-IISVSGKTNFFEKKVGEYAKA 321


>gi|86134368|ref|ZP_01052950.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
           MED152]
 gi|85821231|gb|EAQ42378.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
           MED152]
          Length = 323

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + N H+  +  + + + ++ +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGMHCDFAV------HLHNNHIVNRVPKDRIKEIIVDALDIEREFVTESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+ +R   + G E ++  T NPF +M E+I L+ + NFFE RV+EYQ+  
Sbjct: 252 AKLMTQYLEFVTDRLLLEFGCEKVYDVT-NPFDFM-EMISLEGKTNFFEKRVSEYQKAG 308


>gi|307719930|ref|YP_003891070.1| Ribonucleoside-diphosphate reductase [Sulfurimonas autotrophica DSM
           16294]
 gi|306978023|gb|ADN08058.1| Ribonucleoside-diphosphate reductase [Sulfurimonas autotrophica DSM
           16294]
          Length = 340

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T E +     M  EA  LE  +         +GL 
Sbjct: 215 RDEVTHLVLFQNLINTLRKERPDLFTDELRADVIEMFKEAVKLETEWGKYITQGQILGLT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY+Q++A+ R + +G + L+  + NP  W+ +      +K NFFE  VT Y +G+
Sbjct: 275 DEIVEQYIQYLADDRLNSVGFDKLYNVS-NPIKWVDDFAKFNDQKTNFFEGTVTNYSKGS 333


>gi|253827828|ref|ZP_04870713.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           canadensis MIT 98-5491]
 gi|313142391|ref|ZP_07804584.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
 gi|253511234|gb|EES89893.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           canadensis MIT 98-5491]
 gi|313131422|gb|EFR49039.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
          Length = 341

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN +K E+P L+TK+ +++   M  EA  +E A+         +GL 
Sbjct: 217 RDEVTHLILFQNMINSVKKESPELFTKDLEEEVIEMFREAVKVETAWGEYITQGQILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   ++Y++++A+ R  +IGL  L+   ++P  W+       ++K NFFE  VT Y +G+
Sbjct: 277 SEIIQEYIKYLADERLRRIGLPTLYN-AKHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 335


>gi|326792202|ref|YP_004310023.1| ribonucleotide reductase [Clostridium lentocellum DSM 5427]
 gi|326542966|gb|ADZ84825.1| ribonucleotide reductase [Clostridium lentocellum DSM 5427]
          Length = 342

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K ENP L+T+   ++ R M+      EIA+         +G+N
Sbjct: 214 RDEITHLVVFQNIIKELKKENPELFTESMIEEFREMMRVGVEHEIAWGQYVTANEIMGIN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               + Y+++++N+R   IGLE L+ + T +P  W+     L   K +FFE +VT Y + 
Sbjct: 274 DQLIDAYIKYLSNQRLKAIGLEELYPEITTHPMAWIDSFSKLNNTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|150015087|ref|YP_001307341.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           beijerinckii NCIMB 8052]
 gi|149901552|gb|ABR32385.1| Ribonucleoside-diphosphate reductase [Clostridium beijerinckii
           NCIMB 8052]
          Length = 344

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 2/123 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ ENP L+T+E + + R M+      EI + H  +     G+N
Sbjct: 218 RDENTHLWLFRNIIKELQNENPELFTEEVKNELRNMMKIGVEQEILWGHYVIGDKIQGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E Y++++ N+R  +I L PLFK  + NP  W+  + +    K +FFE R T Y + 
Sbjct: 278 KQLIENYIKYLGNKRLKEINLSPLFKEQDKNPASWVDTLSNANSVKTDFFEARSTAYAKV 337

Query: 120 AEL 122
             L
Sbjct: 338 TTL 340


>gi|300676950|gb|ADK26821.1| ribonucleotide reductase M2 [Zonotrichia albicollis]
          Length = 390

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A L+E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLIHKPSEERVREIIMNAVLIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQR 372


>gi|225850104|ref|YP_002730338.1| ribonucleoside-diphosphate reductase, beta subunit [Persephonella
           marina EX-H1]
 gi|225645787|gb|ACO03973.1| ribonucleoside-diphosphate reductase, beta subunit [Persephonella
           marina EX-H1]
          Length = 329

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 3/116 (2%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKE-FQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           DESLHL  GI+ I  I  ENP +   E F +  +  + +A  LE+ Y         + G+
Sbjct: 212 DESLHLQNGIEAILTIVEENPEIVDDEKFVENIKETIIDAVELELNYLKTKFGGTTIFGV 271

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           +    E+YM++IA+RR  ++G +P FK  +NP  ++ +  D+KK  NFFE   TEY
Sbjct: 272 SYKELEKYMKYIADRRLEELGFDPQFKIDQNPLKFLQKE-DVKKLTNFFEVSSTEY 326


>gi|120437796|ref|YP_863482.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
           KT0803]
 gi|117579946|emb|CAL68415.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
           KT0803]
          Length = 325

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F + + NQ      HL  +  ++K R +L +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGMHCDFAVHLHNQ------HLVNQVPKEKIREILIDALNIEREFVTESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+ +R   ++  E  +  + NPF +M ++I+L+ + NFFE RV+EYQ+   
Sbjct: 252 AKLMTQYLEFVTDRLLVELDCEKEYNVS-NPFDFM-DMINLQGKTNFFEKRVSEYQKAGV 309

Query: 122 LKWD 125
           +  D
Sbjct: 310 MNKD 313


>gi|224418874|ref|ZP_03656880.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
          Length = 340

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN +K E+P L+TK+ +++   M  EA  +E A+         +GL 
Sbjct: 216 RDEVTHLILFQNMINSVKKESPELFTKDLEEEVIEMFREAVKVETAWGEYITQGQILGLT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   ++Y++++A+ R  +IGL  L+   ++P  W+       ++K NFFE  VT Y +G+
Sbjct: 276 SEIIQEYIKYLADERLRRIGLPTLYN-AKHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 334


>gi|78776214|ref|YP_392529.1| ribonucleotide-diphosphate reductase subunit beta [Sulfurimonas
           denitrificans DSM 1251]
 gi|78496754|gb|ABB43294.1| Ribonucleoside-diphosphate reductase [Sulfurimonas denitrificans
           DSM 1251]
          Length = 340

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+ ++ +++   M  EA  LE+A+         +GL 
Sbjct: 215 RDEVTHLVLFQNLINSLRKERPDLFNEKLKEEVIEMFKEAVALEVAWGKYITGGQILGLT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY+Q++A+ R   +G   L+  T NP  W+ +      +K NFFE  V  Y +G+
Sbjct: 275 DAIIEQYIQYLADDRLTSVGFAKLYNVT-NPIKWVDDFSKFNDQKTNFFEGTVANYSKGS 333


>gi|118443949|ref|YP_878438.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           novyi NT]
 gi|118134405|gb|ABK61449.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           novyi NT]
          Length = 342

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K ENP ++T+   ++ R M+      EI +         +G+N
Sbjct: 214 RDEITHLILFQNIIKELKNENPDIFTESIMEEFRMMMKMGVEHEIKWGQYVTNNEILGIN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++++N R + IGLE L+ + TE+P  W+     L   K +FFE +VT Y + 
Sbjct: 274 DNLIEKYIKYLSNLRLNAIGLEVLYPEITEHPMEWIENFSKLNNTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|118087248|ref|XP_418364.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 353

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       +L  +  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 228 RDEGLHCDFACLMFH-------YLVNRPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F + ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 281 CTLMKQYIEFVADRLLMELGFSKVF-HAENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 337


>gi|313683656|ref|YP_004061394.1| ribonucleotide reductase [Sulfuricurvum kujiense DSM 16994]
 gi|313156516|gb|ADR35194.1| ribonucleotide reductase [Sulfuricurvum kujiense DSM 16994]
          Length = 339

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T+E  ++   M  +A  LE A+         +GL 
Sbjct: 215 RDEVTHLVLFQNIINTLRRERSDLFTEELIEEVYDMFRKAVELETAWGKYITQGQILGLT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY+Q++A++R   +GL+PL+    +P  W+ +      +K NFFE  VT Y +G+
Sbjct: 275 NEIVEQYIQYLADQRLTAVGLKPLYN-VSHPIKWVDDFSKFNDQKTNFFEGTVTNYSKGS 333


>gi|194036959|ref|XP_001925036.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Sus
           scrofa]
          Length = 351

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  + + R ++  A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEARVREIIVNAVEIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CVLMKQYIEFVADRLLTELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335


>gi|45268714|dbj|BAD12266.1| p53-inducible ribonucleotide reductase small subunit 2 short form
           gamma [Homo sapiens]
          Length = 139

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           +DE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 14  QDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 66

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 67  CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 123


>gi|242309209|ref|ZP_04808364.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pullorum MIT 98-5489]
 gi|239524250|gb|EEQ64116.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pullorum MIT 98-5489]
          Length = 341

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN  K E+P  +TK+ +++   M  EA  +EIA+         +GL 
Sbjct: 217 RDEVTHLLLFQNMINSTKKESPEFFTKDLEEEVLEMFREAVKVEIAWGEYITQGQILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           A   ++Y++++A+ R  ++GL P+    ++P  W+       ++K NFFE  VT Y +G+
Sbjct: 277 AEIIQEYIKYLADDRLRRVGL-PVLYNAKHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 335


>gi|227498392|ref|ZP_03928542.1| ribonucleoside-diphosphate reductase [Acidaminococcus sp. D21]
 gi|226903854|gb|EEH89772.1| ribonucleoside-diphosphate reductase [Acidaminococcus sp. D21]
          Length = 342

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    +++ +++ E P L+TKE       M+ +    EI +         +GLN
Sbjct: 214 RDEVTHLILFQNILRELRHERPDLFTKEQDAHIADMIRQGAENEIKWGQYITDDKILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y++++AN R   IGL PL+ + ++NP  W+    +L   K +FFE +VT Y + 
Sbjct: 274 NGLIEKYIKYLANIRLEAIGLAPLYPEISQNPMEWIESFSNLNGTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|257067181|ref|YP_003153437.1| ribonucleotide-diphosphate reductase subunit beta [Anaerococcus
           prevotii DSM 20548]
 gi|256799061|gb|ACV29716.1| Ribonucleoside-diphosphate reductase [Anaerococcus prevotii DSM
           20548]
          Length = 352

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 4/123 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +IN +K E   L+  E Q   R ML E    EIA+   ++     GLN
Sbjct: 224 RDENTHLWLFRSLINDLKKEREDLFVPELQNYYREMLKEGVEQEIAWGKYSIGNSIAGLN 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +GLEPL++ Y E P    W+ E  D    K +FFE +VT Y 
Sbjct: 284 EKMIEDYIKYLGNLRAKGLGLEPLYEGYKEIPESMKWVDEYSDPNGVKTDFFEAKVTAYS 343

Query: 118 QGA 120
           + +
Sbjct: 344 KSS 346


>gi|289548460|ref|YP_003473448.1| ribonucleoside-diphosphate reductase [Thermocrinis albus DSM 14484]
 gi|289182077|gb|ADC89321.1| Ribonucleoside-diphosphate reductase [Thermocrinis albus DSM 14484]
          Length = 342

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H++   ++I  +K ENP L+T E ++  +     A   EI +         +G+N
Sbjct: 218 RDELTHVSLFRNIILTLKKENPELFTPEMEKWVKEFFRYAASEEIKWGQYVTRNQILGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               ++Y++++AN R  QIG EP+F   TENP  W+     +   K +FF+ +   Y + 
Sbjct: 278 DQLIDRYIKYLANLRLTQIGYEPVFPDVTENPMKWIDTFRTINDTKTDFFQAKPQTYAKR 337

Query: 120 AELKW 124
           +ELKW
Sbjct: 338 SELKW 342


>gi|326917964|ref|XP_003205263.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Meleagris gallopavo]
          Length = 353

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       +L  +  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 228 RDEGLHCDFACLMFH-------YLVNRPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F + ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 281 CTLMKQYIEFVADRLLMELGFSKVF-HAENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 337


>gi|118089007|ref|XP_419948.2| PREDICTED: similar to small subunit ribonucleotide reductase
           isoform 2 [Gallus gallus]
          Length = 384

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ + ++  A L+E  +  E +P   +G+N
Sbjct: 259 RDEGLHCDFACLMFK-------HLIRKPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 311

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 312 CTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 366


>gi|7106399|ref|NP_033130.1| ribonucleoside-diphosphate reductase subunit M2 [Mus musculus]
 gi|132626|sp|P11157|RIR2_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|22218698|pdb|1H0N|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
           To Model The Reactive Diferrous State
 gi|22218699|pdb|1H0O|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
           To Model The Reactive Diferrous State
 gi|52696260|pdb|1W68|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
           Subunit R2 Under Oxidizing Conditions. A Fully Occupied
           Dinuclear Iron Cluster.
 gi|52696261|pdb|1W69|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
           Subunit R2 Under Reducing Conditions. A Fully Occupied
           Dinuclear Iron Cluster And Bound Acetate.
 gi|157834262|pdb|1XSM|A Chain A, Protein R2 Of Ribonucleotide Reductase From Mouse
 gi|50720|emb|CAA33707.1| M2 ribonucleotide reductase [Mus musculus]
 gi|200768|gb|AAA40062.1| ribonucleotide reductase subunit M2 [Mus musculus]
 gi|26354034|dbj|BAC40647.1| unnamed protein product [Mus musculus]
 gi|54887418|gb|AAH85136.1| Ribonucleotide reductase M2 [Mus musculus]
 gi|74139292|dbj|BAE40793.1| unnamed protein product [Mus musculus]
 gi|74151119|dbj|BAE27683.1| unnamed protein product [Mus musculus]
 gi|74179887|dbj|BAE36508.1| unnamed protein product [Mus musculus]
 gi|74188932|dbj|BAE39238.1| unnamed protein product [Mus musculus]
 gi|74189151|dbj|BAE39331.1| unnamed protein product [Mus musculus]
 gi|74206394|dbj|BAE24918.1| unnamed protein product [Mus musculus]
 gi|74211991|dbj|BAE40165.1| unnamed protein product [Mus musculus]
          Length = 390

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ R ++  A  +E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 372


>gi|281340156|gb|EFB15740.1| hypothetical protein PANDA_011632 [Ailuropoda melanoleuca]
          Length = 336

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 211 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+ A
Sbjct: 264 CVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVAEYQRFA 320


>gi|118089009|ref|XP_001231545.1| PREDICTED: similar to small subunit ribonucleotide reductase
           isoform 1 [Gallus gallus]
          Length = 392

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ + ++  A L+E  +  E +P   +G+N
Sbjct: 267 RDEGLHCDFACLMFK-------HLIRKPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 320 CTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 374


>gi|74207686|dbj|BAE40088.1| unnamed protein product [Mus musculus]
          Length = 390

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ R ++  A  +E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 372


>gi|326916502|ref|XP_003204546.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Meleagris gallopavo]
          Length = 339

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ + ++  A L+E  +  E +P   +G+N
Sbjct: 214 RDEGLHCDFACLMFK-------HLIRKPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 266

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 267 CTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 321


>gi|241668401|ref|ZP_04755979.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876934|ref|ZP_05249644.1| glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
 gi|254842955|gb|EET21369.1| glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
          Length = 410

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H+     +      ENP++   +F+++   M  +A  LE  +       G + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFIDLAYEIGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118
           L A   ++Y++ I +RR +Q+GL  ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKEYIRHITDRRLNQLGLNEIYNIDKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 119 GAELKWD 125
           G    WD
Sbjct: 399 GLTGNWD 405


>gi|148705043|gb|EDL36990.1| ribonucleotide reductase M2 [Mus musculus]
          Length = 411

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ R ++  A  +E  +  E +P   +G+N
Sbjct: 286 RDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMN 338

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 339 CTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 393


>gi|6525234|gb|AAF15363.1|AF205376_1 ribonucleotide reductase R2 subunit [Plasmodium falciparum]
          Length = 320

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +  + P       +Q  + ++ EA  +E ++  E++P   +G+N
Sbjct: 195 RDEGLHTDFNCLIYSLLDNKLP-------EQMVQNIVKEAVEVERSFICESLPCDLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 248 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 304


>gi|73974198|ref|XP_539109.2| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 2 [Canis familiaris]
          Length = 351

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+ A
Sbjct: 279 CVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVAEYQRFA 335


>gi|167627842|ref|YP_001678342.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597843|gb|ABZ87841.1| Ribonucleoside-diphosphate reductase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 410

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 2/127 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDES+H+     +      ENP++   +F+++   M  +A  LE  +       G + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFIDLAYEIGTIEG 338

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ-Q 118
           L A   ++Y++ I +RR +Q+GL  ++   +NP  W+  +++     NFFE RVTEY+  
Sbjct: 339 LKADEVKEYIRHITDRRLNQLGLNEIYNIDKNPLTWLEWILNGADHTNFFENRVTEYEVA 398

Query: 119 GAELKWD 125
           G    WD
Sbjct: 399 GLTGNWD 405


>gi|302409182|ref|XP_003002425.1| ribonucleoside-diphosphate reductase small chain [Verticillium
           albo-atrum VaMs.102]
 gi|261358458|gb|EEY20886.1| ribonucleoside-diphosphate reductase small chain [Verticillium
           albo-atrum VaMs.102]
          Length = 414

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q  + ++ +A  +E  +  E +P G +G+N
Sbjct: 276 RDEGLHTDFACLLFS-------HLNNRPSKQTVQDIVTDAVNIEQEFLTEALPCGLLGMN 328

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A   +QY++F+A+R    +G E ++K T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 329 ATLMKQYIEFVADRLLVALGNEKVYKAT-NPFDFM-ENISLGGKTNFFEKRVADYQKAG 385


>gi|124808087|ref|XP_001348226.1| ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
 gi|23497116|gb|AAN36665.1|AE014816_50 ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
          Length = 349

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +  + P       +Q  + ++ EA  +E ++  E++P   +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLDNKLP-------EQMVQNIVKEAVEVERSFICESLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 333


>gi|301774462|ref|XP_002922647.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Ailuropoda melanoleuca]
          Length = 387

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 262 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+ A
Sbjct: 315 CVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVAEYQRFA 371


>gi|301772278|ref|XP_002921557.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Ailuropoda melanoleuca]
          Length = 393

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ R ++  A  +E  +  E +P   +G+N
Sbjct: 268 RDEGLHCDFACLMFK-------HLVHKPSEQRVREIIINAVRIEQEFLTEALPVKLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 321 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 375


>gi|45360749|ref|NP_989048.1| ribonucleotide reductase M2, gene 1 [Xenopus (Silurana) tropicalis]
 gi|38174078|gb|AAH61353.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 378

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 68/117 (58%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K  +Q+ R ++ +A  +E  +  E +P   +G+N
Sbjct: 253 RDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFLTEALPVELIGMN 305

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G + +FK +ENPF +M E I L+ + NFFE +V EYQ+
Sbjct: 306 CKLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFFEKKVAEYQK 360


>gi|194474072|ref|NP_001124015.1| ribonucleoside-diphosphate reductase subunit M2 B [Rattus
           norvegicus]
 gi|149066498|gb|EDM16371.1| ribonucleotide reductase M2 B (TP53 inducible) (predicted) [Rattus
           norvegicus]
          Length = 351

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++   ++ +A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVMEIIVDAVKIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CVLMKQYIEFVADRLLGELGFSKIFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335


>gi|293343290|ref|XP_002725449.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Rattus
           norvegicus]
 gi|293355176|ref|XP_002728627.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Rattus
           norvegicus]
          Length = 390

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIITNAVRIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +FK  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 372


>gi|227485717|ref|ZP_03916033.1| ribonucleoside-diphosphate reductase [Anaerococcus lactolyticus
           ATCC 51172]
 gi|227236272|gb|EEI86287.1| ribonucleoside-diphosphate reductase [Anaerococcus lactolyticus
           ATCC 51172]
          Length = 352

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +IN +K E P L+T E     R ML E    EI +    +     GL+
Sbjct: 224 RDENTHLWLFRSLINDLKKERPDLFTPEATIVYRDMLKEGVRQEIEWGKYAIGDNIAGLS 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +G +PLF+ YTE P    W+ E  D  + K +FFE +VT Y 
Sbjct: 284 TTMIEDYIKYLGNLRAKGLGFDPLFEGYTEIPQSMKWVDEYSDPNRVKTDFFEAKVTAYS 343

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 344 KSSIIEDD 351


>gi|224438210|ref|ZP_03659145.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
 gi|313144656|ref|ZP_07806849.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
 gi|313129687|gb|EFR47304.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
          Length = 348

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL     +IN ++ E PHL+T   +++   M  +A  +E  +         +GL 
Sbjct: 224 RDEVTHLLVFQQMINALRKEQPHLFTPSLEEEVIAMFQKAVEIESVWGEYITQGQILGLT 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           A    +Y+Q++A+ R   +GL  ++ +++NP  W+ +      +K NFFE +VT Y +G+
Sbjct: 284 AEIIREYIQYLADMRLRAVGLREIY-HSKNPIKWVEQFASFNDQKTNFFEAKVTNYSKGS 342


>gi|330998673|ref|ZP_08322403.1| ribonucleoside-diphosphate reductase, beta subunit [Parasutterella
           excrementihominis YIT 11859]
 gi|329576534|gb|EGG58042.1| ribonucleoside-diphosphate reductase, beta subunit [Parasutterella
           excrementihominis YIT 11859]
          Length = 327

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 8/125 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           + DE+LH    I +  +  IENP LWT   +++    +  M+  E   +++A+    M K
Sbjct: 191 INDETLHTESMIRLFREYIIENPELWTDSLKKRIYDIAEKMIELEDAFIDLAFGVNDMSK 250

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
               L+    + Y+++I +RR   +G++ +FK   NP PW+  ++ +    NFFE RV +
Sbjct: 251 Q--NLSPADVKAYIRWICDRRLAAMGMKEIFKVNVNPLPWVDSMLGV-THTNFFENRVVD 307

Query: 116 YQQGA 120
           Y +GA
Sbjct: 308 YAKGA 312


>gi|321263951|ref|XP_003196693.1| ribonucleotide reductase small subunit [Cryptococcus gattii WM276]
 gi|317463170|gb|ADV24906.1| Ribonucleotide reductase small subunit, putative [Cryptococcus
           gattii WM276]
          Length = 430

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + N +K       T E  +    ++ EA ++E  +  + +P   +G+N
Sbjct: 294 RDEGMHTDFACLLYNHLK---HRCSTDEVHR----IVSEALVIEKQFLTDALPCALIGIN 346

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           A    QYM+F+A+R    +G   ++  T NPF WM E+I L+ + NFFE+RV+ YQ+ 
Sbjct: 347 AHLMCQYMEFVADRLVVDLGYPKIYNAT-NPFDWM-ELISLQGKANFFESRVSAYQKA 402


>gi|242095388|ref|XP_002438184.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
 gi|241916407|gb|EER89551.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
          Length = 339

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   ++       +K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYELLR-------SKLDEARVREIVADAVDIEREFVCDALPVALVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++  T NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 262 GGLMSQYIEFVADRLLMALGCKKMYNAT-NPFDWM-ELISLQGKTNFFEKRVGDYQKAS 318


>gi|303258316|ref|ZP_07344319.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderiales
           bacterium 1_1_47]
 gi|302858762|gb|EFL81850.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderiales
           bacterium 1_1_47]
          Length = 328

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 8/125 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLLEIAYAHETMPK 55
           + DE+LH    I +  +  IENP LWT   +++    +  M+  E   +++A+    M K
Sbjct: 192 INDETLHTESMIRLFREYIIENPELWTDSLKKRIYDIAEKMIELEDAFIDLAFGVNDMSK 251

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
               L+    + Y+++I +RR   +G++ +FK   NP PW+  ++ +    NFFE RV +
Sbjct: 252 Q--NLSPADVKAYIRWICDRRLAAMGMKEIFKVNVNPLPWVDSMLGV-THTNFFENRVVD 308

Query: 116 YQQGA 120
           Y +GA
Sbjct: 309 YAKGA 313


>gi|310831442|ref|YP_003970085.1| putative ribonucleoside-diphosphate reductase small subunit
           [Cafeteria roenbergensis virus BV-PW1]
 gi|309386626|gb|ADO67486.1| putative ribonucleoside-diphosphate reductase small subunit
           [Cafeteria roenbergensis virus BV-PW1]
          Length = 326

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H ++ I + + ++        K  Q+K + M  +A   E  +  E++P   +G+N
Sbjct: 201 RDEGMHCDYSIMLYHMLQ-------NKLSQEKIQQMFKDAVETERIFICESLPCSLLGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           A   EQY++F+A++   ++G   +FK  +NPF WM E I ++ + NFFE R T+YQ+ 
Sbjct: 254 ADLMEQYIKFVADQLIIKLGYNKIFK-VDNPFTWM-EAISIEGKTNFFEHRPTQYQRA 309


>gi|149637725|ref|XP_001508783.1| PREDICTED: similar to Ribonucleotide reductase M2 B (TP53
           inducible) [Ornithorhynchus anatinus]
          Length = 401

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 71/119 (59%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   ++ Q  ++ P       + K + ++ +A  +E  +  E +P G +G+N
Sbjct: 276 RDEGLHCDFAC-LMFQYLVKKPS------EDKVKEIIIDAVEIEQEFLTEALPVGLIGMN 328

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F +++NPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 329 CTLMKQYIEFVADRLLVELGFSKVF-HSDNPFDFM-ENISLEGKTNFFEKRVSEYQRFA 385


>gi|313675915|ref|YP_004053911.1| ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
 gi|312942613|gb|ADR21803.1| Ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
          Length = 331

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N HL  K  ++K   ++ +A  +E  +  +++P   +G+N
Sbjct: 202 RDEGLHCDFAC------LLYNDHLVNKLSKEKVTAIITDAVEIEKEFVTDSLPVKLIGMN 255

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++  + ++  + NPF +M E+I L+ + NFFE RV +YQ+   
Sbjct: 256 ADLMCQYIEFVADRLLQELRCDKVYG-SSNPFDFM-EMISLQGKTNFFEKRVGDYQKAGV 313

Query: 122 LK 123
           +K
Sbjct: 314 MK 315


>gi|294950175|ref|XP_002786498.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239900790|gb|EER18294.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 350

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N +K      +T+   ++   ++  A  +E  +  E++P   +G+N
Sbjct: 208 RDEGLHADFACLLYNMLK------YTRLPDERVHEIVRGAVEVERVFISESLPVSLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    +Y++F+A+R    +G   L+  T NPF WM ++I L+ + NFFE RV EYQ+G 
Sbjct: 262 SQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWM-KMISLQGKTNFFEKRVGEYQKGG 318


>gi|224048725|ref|XP_002196356.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Taeniopygia
           guttata]
          Length = 390

 Score = 70.5 bits (171), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ + ++  A L+E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLIHKPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQR 372


>gi|1710398|sp|P50650|RIR2_PLAF4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|555613|gb|AAA50170.1| ribonucleotide reductase small subunit [Plasmodium falciparum]
          Length = 349

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +  + P       +Q  + ++ EA  +E ++  E++P   +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLDNKLP-------EQIIQNIVKEAVEVERSFICESLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 333


>gi|148232385|ref|NP_001085389.1| ribonucleotide reductase M2, gene 1 [Xenopus laevis]
 gi|48735122|gb|AAH72071.1| MGC78958 protein [Xenopus laevis]
          Length = 406

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 68/117 (58%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K  +Q+ R ++ +A  +E  +  E +P   +G+N
Sbjct: 281 RDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFLTEALPVELIGMN 333

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G + +FK +ENPF +M E I L+ + NFFE +V EYQ+
Sbjct: 334 CTLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFFEKKVGEYQK 388


>gi|325478871|gb|EGC81981.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           prevotii ACS-065-V-Col13]
          Length = 352

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +IN ++ E   L+TKE ++  R ML E    EIA+    +     GL+
Sbjct: 224 RDENTHLWLFRSLINDLRKEREDLFTKEHKEYYRNMLKEGVEQEIAWGKYAIGDNIAGLS 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +GLE L++ YTE P    W+ E  D    K +FFE +VT Y 
Sbjct: 284 EKMIEDYIKYLGNLRAKGLGLEALYEGYTEIPDSMKWVDEYSDPNAVKTDFFEAKVTAYS 343

Query: 118 QGA 120
           + +
Sbjct: 344 KSS 346


>gi|327261311|ref|XP_003215474.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 2 [Anolis carolinensis]
          Length = 390

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFLTEALPVNLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQR 372


>gi|76630263|ref|XP_880783.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 3 [Bos
           taurus]
 gi|297480612|ref|XP_002691528.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 2 [Bos
           taurus]
 gi|296482362|gb|DAA24477.1| ribonucleotide reductase M2 polypeptide isoform 2 [Bos taurus]
          Length = 341

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 216 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 268

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 269 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 323


>gi|2500209|sp|Q60561|RIR2_MESAU RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|49650|emb|CAA48232.1| ribonucleotide reductase [Mesocricetus auratus]
          Length = 386

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEQRVQEIITNAVRIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +FK  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 372


>gi|297805560|ref|XP_002870664.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316500|gb|EFH46923.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
           lyrata]
          Length = 333

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++       TK  +++ ++++ +A  +E  +  + +P   VG+N
Sbjct: 201 RDEGLHCDFACLIYSLLR-------TKLDEERLKSIVCDAVEIEREFVCDALPCALVGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G   ++  + NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 254 RELMSQYIEFVADRLLTALGCGKVYGVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKAS 310


>gi|327261309|ref|XP_003215473.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 1 [Anolis carolinensis]
          Length = 394

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFLTEALPVNLIGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 322 CTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQR 376


>gi|70936723|ref|XP_739266.1| ribonucleotide reductase small subunit [Plasmodium chabaudi
           chabaudi]
 gi|56516136|emb|CAH80811.1| ribonucleotide reductase small subunit, putative [Plasmodium
           chabaudi chabaudi]
          Length = 349

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 70/119 (58%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P       ++  + ++ EA  +E ++  E++P   +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLENKLP-------EEVVQNIVKEAVEVERSFICESLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKVF-HSKNPFSWM-DLISLQGKTNFFEKRVADYQKSG 333


>gi|257456224|ref|ZP_05621421.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           vincentii ATCC 35580]
 gi|257446310|gb|EEV21356.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           vincentii ATCC 35580]
          Length = 351

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 68/128 (53%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I++++ E P L+T E  +  R+M+ E    EIA+ H  +     GL 
Sbjct: 223 RDENTHLWLFRSIIHELQKEEPQLFTPENNELFRSMIREGCEQEIAWGHYVIGDDIPGLT 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+Q++ N RC  +G EPL++ + E P    W+S+  +    K +FFE + T Y 
Sbjct: 283 RGMVTDYIQYLGNLRCENLGFEPLYEGHREEPASMSWVSQYSNANLIKTDFFEAKSTAYA 342

Query: 118 QGAELKWD 125
           + + LK D
Sbjct: 343 KSSALKDD 350


>gi|88682973|gb|AAI05512.1| RRM2 protein [Bos taurus]
          Length = 338

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 213 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 265

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 266 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 320


>gi|327261313|ref|XP_003215475.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 3 [Anolis carolinensis]
          Length = 391

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 266 RDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFLTEALPVNLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 319 CTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQR 373


>gi|302833193|ref|XP_002948160.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
           nagariensis]
 gi|300266380|gb|EFJ50567.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
           nagariensis]
          Length = 354

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  +  +++   ++ EA  LE  +  E +    +G+N
Sbjct: 219 RDEGLHCDFACCLYG-------HLKNRLSRERVVKIVDEAVRLEDEFCTEALSCELLGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G +  +  T NPF WM E+I L+ + NFFE RV EYQ+   
Sbjct: 272 ADLMRQYIRFVADRLLVSLGYDKYYN-TVNPFDWM-EMISLQGKANFFERRVGEYQRACV 329

Query: 122 LKWD 125
           +  D
Sbjct: 330 MAGD 333


>gi|326386063|ref|ZP_08207687.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326209288|gb|EGD60081.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 351

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDE+LH   GI  + Q  ++     TK  ++       +   LE A+      +G V G
Sbjct: 189 VRDETLHCE-GITRLFQAFVQERDCMTKAVREDIIDCCQKTVRLEDAFIDLAFEQGPVPG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           ++A   ++Y+++IA+ R  Q+G +P++   E+P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MSAKEIKRYIRYIADWRLGQLGFQPIYMIEEHPLPWLTPLLNGVEHANFFETRATEYSKA 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|198420293|ref|XP_002130242.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit
           M2 (Ribonucleotide reductase small subunit)
           (Ribonucleotide reductase small chain) [Ciona
           intestinalis]
          Length = 393

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  + +   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFACLMFK-------HLLHKPSEARVVEIVKDAVTIEQEFLTDALPVALIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +FK  ENPF +M E+I L+ + NFFE RV EYQ+  
Sbjct: 321 NKLMKQYIEFVADRLLVELGCSKVFK-VENPFDFM-ELISLEGKTNFFEKRVGEYQKAG 377


>gi|160881347|ref|YP_001560315.1| ribonucleoside-diphosphate reductase [Clostridium phytofermentans
           ISDg]
 gi|160430013|gb|ABX43576.1| Ribonucleoside-diphosphate reductase [Clostridium phytofermentans
           ISDg]
          Length = 342

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    +++ ++++E   ++TK  +++ R M+      EIA+         +G+N
Sbjct: 214 RDEITHLVLFQNIMKELRVEQKEMFTKGLEEELREMMRTGVEHEIAWGQYVTDNQILGIN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               +QY+++++N+R   +GLE L+ + T++P  W+    ++   K +FFE +VT Y + 
Sbjct: 274 NELIDQYIKYLSNQRLRAVGLEILYPEITKHPMEWIESFSNINSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AVFDFD 339


>gi|20809684|gb|AAH28932.1| Similar to ribonucleotide reductase protein r2 class I [Homo
           sapiens]
          Length = 172

 Score = 70.1 bits (170), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 47  RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 99

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 100 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 154


>gi|58260834|ref|XP_567827.1| ribonucleotide reductase small subunit [Cryptococcus neoformans
           var. neoformans JEC21]
 gi|134117207|ref|XP_772830.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255448|gb|EAL18183.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229908|gb|AAW46310.1| ribonucleotide reductase small subunit, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 430

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + N +K       T E       ++ EA ++E  +  + +P   +G+N
Sbjct: 294 RDEGMHTDFACLLYNHLK---HRCSTDEVHH----IVSEALVIEKQFLTDALPCALIGIN 346

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           A    QYM+F+A+R    +G   ++  T NPF WM E+I L+ + NFFE+RV+ YQ+ 
Sbjct: 347 AHLMCQYMEFVADRLVVDLGYPKIYNAT-NPFDWM-ELISLQGKANFFESRVSAYQKA 402


>gi|242076364|ref|XP_002448118.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
 gi|241939301|gb|EES12446.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
          Length = 339

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYDLLR-------GKLDESRVREIVADAVDIEREFVCDALPVALVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++    NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 262 GALMSQYIEFVADRLLMALGHKKMYN-VANPFDWM-ELISLQGKTNFFEKRVGEYQKAS 318


>gi|125554800|gb|EAZ00406.1| hypothetical protein OsI_22421 [Oryza sativa Indica Group]
          Length = 244

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 114 RDEGLHCDFACLLYDLLR-------GKLDEARVREIVADAVDIEREFVCDALPVALVGMN 166

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++    NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 167 GDLMSQYIEFVADRLLMALGCKKMYN-VANPFDWM-ELISLQGKTNFFEKRVGDYQKAS 223


>gi|255536887|ref|XP_002509510.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
 gi|223549409|gb|EEF50897.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
          Length = 329

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 200 RDEGLHCDFACLIYSLLK-------KKLSEERVKGIVRDAVNIEREFVCDALPCALVGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G    +  + NPF WM E+I L+ + NFFE RV EYQ+ A
Sbjct: 253 GELMSQYIEFVADRLLGALGCGKEYNVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKAA 309


>gi|296421312|ref|XP_002840209.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636423|emb|CAZ84400.1| unnamed protein product [Tuber melanosporum]
          Length = 397

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N       HL  +  QQ  + ++ EA  +E  +  E +P   +G+N
Sbjct: 262 RDEGLHTDFACLLFN-------HLNNRPSQQAVQDIIVEAVGIEQEFLTEALPCALLGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +   +QY++F+A+R    +G  P F    NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 315 SKLMKQYIEFVADRLLLSLG-NPKFYNATNPFDFM-ESISLAGKTNFFEKRVGDYQKAG 371


>gi|224055741|ref|XP_002298630.1| predicted protein [Populus trichocarpa]
 gi|222845888|gb|EEE83435.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ EA  +E  +  +++P   VG+N
Sbjct: 200 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKEAVDIEREFVVDSLPCALVGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 253 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEYQKAS 309


>gi|126322530|ref|XP_001380256.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 361

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 71/119 (59%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       +L  K  +++ + ++  A  +E  +  + +P G +G+N
Sbjct: 236 RDEGLHCDFACLMFH-------YLVNKPSEERVKEIIINAVEIEQEFLTDALPVGLIGIN 288

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +   +QY++F+A+R   ++G   +F+ ++NPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 289 STLMKQYIEFVADRLLVELGFSKVFQ-SDNPFDFM-ENISLEGKTNFFEKRVSEYQRFA 345


>gi|77748199|gb|AAI06683.1| MGC78958 protein [Xenopus laevis]
          Length = 406

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 68/117 (58%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K  +Q+ R ++ +A  +E  +  E +P   +G+N
Sbjct: 281 RDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFLIEALPVELIGMN 333

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G + +FK +ENPF +M E I L+ + NFFE +V EYQ+
Sbjct: 334 CTLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFFEKKVGEYQK 388


>gi|76630259|ref|XP_584910.2| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|297480610|ref|XP_002691527.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|296482361|gb|DAA24476.1| ribonucleotide reductase M2 polypeptide isoform 1 [Bos taurus]
          Length = 389

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 264 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 316

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 317 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 371


>gi|75224904|sp|Q6Y657|RIR2B_ARATH RecName: Full=Putative ribonucleoside-diphosphate reductase small
           chain B; AltName: Full=Ribonucleoside-diphosphate
           reductase R2B subunit; AltName: Full=Ribonucleotide
           reductase small subunit B
 gi|37729626|gb|AAO62422.1| ribonucleotide reductase small subunit [Arabidopsis thaliana]
          Length = 333

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++       TK  + + + ++ +A  +E  +  + +P   VG+N
Sbjct: 201 RDEGLHCDFACLIYSLLR-------TKLDEDRLKAIVCDAVEIEREFVCDALPCALVGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G   ++  + NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 254 RELMSQYIEFVADRLLAALGCAKVYGVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKAS 310


>gi|225010999|ref|ZP_03701465.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-3C]
 gi|225004906|gb|EEG42862.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-3C]
          Length = 328

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H ++ +       + N HL  K  + + R +L +A  +E  +  E++P   +G+N
Sbjct: 199 RDEGMHCDYAV------HLHNHHLINKVPKARIREILVDALNIERTFITESLPASLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+ +R   ++  E  +  + NPF +M ++I L+ + NFFE RV+EYQ+   
Sbjct: 253 AKLMTQYLEFVTDRLLVELQCEKEYNVS-NPFDFM-DMISLQGKTNFFEKRVSEYQKAGV 310

Query: 122 LKWD 125
           L  D
Sbjct: 311 LNKD 314


>gi|218289144|ref|ZP_03493380.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240727|gb|EED07906.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 345

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++ ++I  ENP + T + +++   M+  A   EIA+         VGL 
Sbjct: 218 RDELTHLAIFRNLYHEIVRENPGIVTPDMEEEFVEMMRTAVQHEIAWGQYVTQGKIVGLT 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               + Y++++AN R   + L  L+ +  E+P PWM     +   K +FFE RVT Y + 
Sbjct: 278 DALIDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTDFFEQRVTNYTKA 337

Query: 120 AELKWD 125
             L WD
Sbjct: 338 GNLNWD 343


>gi|156847978|ref|XP_001646872.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117553|gb|EDO19014.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 400

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   + + IK + +P +  K        ++ EA  +E  Y  + +P   +G+
Sbjct: 270 RDEGLHTDFACLLFSHIKNKPDPAIVEK--------IVTEAVEIEKRYFTDALPVALLGM 321

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY++F+A+R     G E +FK  ENPF +M E I L  + NFFE RV++YQ+ +
Sbjct: 322 NADLMNQYVEFVADRLLVAFGNEKVFK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAS 379


>gi|68069763|ref|XP_676793.1| ribonucleotide reductase small subunit [Plasmodium berghei strain
           ANKA]
 gi|56496646|emb|CAI04349.1| ribonucleotide reductase small subunit, putative [Plasmodium
           berghei]
          Length = 158

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 70/119 (58%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P       ++  + ++ EA  +E ++  E++P   +G+N
Sbjct: 33  RDEGLHTDFNCLIYSLLENKLP-------EEVVQNIVKEAVEVERSFICESLPCDLIGMN 85

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 86  SRLMSQYIEFVADRLLECLGCSKVF-HSKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 142


>gi|193784694|dbj|BAG53847.1| unnamed protein product [Homo sapiens]
 gi|193787382|dbj|BAG52588.1| unnamed protein product [Homo sapiens]
          Length = 297

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 172 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 225 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 279


>gi|89890041|ref|ZP_01201552.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
           bacterium BBFL7]
 gi|89518314|gb|EAS20970.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
           bacterium BBFL7]
          Length = 330

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + N HL  K  +++   ++ +A  +E  +  E++P   +G+N
Sbjct: 199 RDEGMHCDFAV------HLHNHHLVNKVPKERITEIIVDALNIEREFITESLPASLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+ +R   ++  +P++  T NPF +M ++I ++ + NFFE RV EYQ+  
Sbjct: 253 AKLMTQYLEFVTDRLLGELECDPVYNVT-NPFDFM-DLIGMEGKTNFFEKRVGEYQKAG 309


>gi|227541|prf||1706181A ribonucleotide reductase
          Length = 290

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 165 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 217

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 218 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 272


>gi|71043760|ref|NP_001020911.1| ribonucleoside-diphosphate reductase subunit M2 [Rattus norvegicus]
 gi|77416595|sp|Q4KLN6|RIR2_RAT RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|68533806|gb|AAH99082.1| Ribonucleotide reductase M2 [Rattus norvegicus]
 gi|149051013|gb|EDM03186.1| rCG61374 [Rattus norvegicus]
          Length = 390

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  +  +E  +  E +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIITNSVRIEQEFLTEALPVKLIGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +FK  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 372


>gi|52077136|dbj|BAD46182.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|52077275|dbj|BAD46317.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|186920364|gb|ACC95435.1| ribonucleotide diphosphate reductase small subunit 1 [Oryza sativa
           Japonica Group]
          Length = 339

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYDLLR-------GKLDEARVREIVADAVDIEREFVCDALPVALVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++    NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 262 GDLMSQYIEFVADRLLMALGCKKMYN-VANPFDWM-ELISLQGKTNFFEKRVGDYQKAS 318


>gi|258511567|ref|YP_003185001.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478293|gb|ACV58612.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 369

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++ ++I  ENP + T + +++   M+  A   EIA+         VGL 
Sbjct: 242 RDELTHLAIFRNLYHEIIRENPGIVTPDMEEEFVEMMRTAVQHEIAWGQYVTQGKIVGLT 301

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               + Y++++AN R   + L  L+ +  E+P PWM     +   K +FFE RVT Y + 
Sbjct: 302 DALIDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTDFFEQRVTNYTKA 361

Query: 120 AELKWD 125
             L WD
Sbjct: 362 GNLNWD 367


>gi|226528734|ref|NP_001150842.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
 gi|195642302|gb|ACG40619.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   ++        K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYELLR-------NKLDEARVREIVADAVDIEREFVCDALPVALVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++  T NPF WM E+I L  + NFFE RV +YQ+ +
Sbjct: 262 GDLMSQYIEFVADRLLMALGCKKMYNVT-NPFDWM-ELISLMGKTNFFEKRVGDYQKAS 318


>gi|301166951|emb|CBW26530.1| putative ribonucleoside-diphosphate reductase small chain subunit
           [Bacteriovorax marinus SJ]
          Length = 322

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 13/124 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTM---LHEATLLEIAYAHETMPKGFV 58
           RDE LH  F   +          L T E Q    T+   + EA  +E  +  E +P   +
Sbjct: 195 RDEGLHCEFACHI--------HELLTPEEQLNKETITQIITEAVSIEKEFITEAIPVSLI 246

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           G+NA    +Y++F+A+   +++G E  +  TENPF WM E+I L+ + NFFE RV+EYQ+
Sbjct: 247 GMNADMMSRYIEFVADYWLNRLGCEKAYN-TENPFDWM-ELISLEGKTNFFEKRVSEYQK 304

Query: 119 GAEL 122
              L
Sbjct: 305 PGVL 308


>gi|145580571|pdb|2UW2|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase
           Subunit R2
          Length = 332

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 207 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 259

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 260 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 314


>gi|9634266|ref|NP_037805.1| ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
           exigua MNPV]
 gi|6960505|gb|AAF33575.1|AF169823_45 ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
           exigua MNPV]
          Length = 313

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 14/120 (11%)

Query: 2   RDESLHLNFGIDVIN---QIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           RDE LH NF     N     K++ P +           M  EA  +E+ +  E +P+  V
Sbjct: 191 RDEGLHTNFACLYYNTRVDQKLDAPTV---------NDMFSEAVAIEMEFFAEALPESLV 241

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           G+NA    +Y++F+A+R   Q+   P   YTENPF +M+  I L+ + NFFE RV EY++
Sbjct: 242 GMNANMMRKYIEFVADRLLVQLKY-PKMYYTENPFEFMNN-ISLEGKTNFFEKRVGEYKR 299


>gi|163784572|ref|ZP_02179421.1| ribonucleotide-diphosphate [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880158|gb|EDP73813.1| ribonucleotide-diphosphate [Hydrogenivirga sp. 128-5-R1-1]
          Length = 139

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 3/116 (2%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           DESLHL  GI+ I  I  ENP +    +F +  R  + +A  LE+ Y         + G+
Sbjct: 22  DESLHLQNGIEAILTIIEENPEIVDDIKFVENIRDTIIDAVELELNYLKTKFGGTTIFGV 81

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           +    E YM++IA+RR  ++G +P F   +NP  ++ +  D+KK  NFFE   TEY
Sbjct: 82  SYKELEMYMKYIADRRLEELGFDPQFNIQQNPLKFLQKE-DVKKLTNFFEVSSTEY 136


>gi|73979721|ref|XP_540076.2| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain
           (Ribonucleotide reductase small chain) isoform 1 [Canis
           familiaris]
          Length = 394

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFLTEALPVKLIGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 322 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 376


>gi|296271635|ref|YP_003654266.1| ribonucleoside-diphosphate reductase [Arcobacter nitrofigilis DSM
           7299]
 gi|296095810|gb|ADG91760.1| Ribonucleoside-diphosphate reductase [Arcobacter nitrofigilis DSM
           7299]
          Length = 339

 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN  + E P L+T E + K R M  +A  LE A+         +G  
Sbjct: 215 RDEVTHLLLFQNMINSTRKERPDLFTPELEVKVRAMFRKAVELEAAWGAYITQGQILGFT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
                QY+Q++A++R   +G +P +   ++P PW+        ++ NFFE  V  Y +G+
Sbjct: 275 DGIITQYIQYLADKRLDAVGYKPEYN-VKHPIPWVDGYSSFNDQRTNFFEGNVVNYSKGS 333


>gi|4557845|ref|NP_001025.1| ribonucleoside-diphosphate reductase subunit M2 isoform 2 [Homo
           sapiens]
 gi|400979|sp|P31350|RIR2_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|36155|emb|CAA42181.1| small subunit ribonucleotide reductase [Homo sapiens]
 gi|251637|gb|AAA09577.1| ribonucleotide reductase R2 subunit [Homo sapiens]
 gi|12804875|gb|AAH01886.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
 gi|14029165|gb|AAK51163.1| ribonucleotide reductase M2 subunit [Homo sapiens]
 gi|20988810|gb|AAH30154.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
 gi|62702173|gb|AAX93099.1| unknown [Homo sapiens]
 gi|123981920|gb|ABM82789.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
 gi|123996753|gb|ABM85978.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
 gi|189053955|dbj|BAG36462.1| unnamed protein product [Homo sapiens]
 gi|261861600|dbj|BAI47322.1| ribonucleotide reductase M2 [synthetic construct]
          Length = 389

 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 264 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 316

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 317 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 371


>gi|162147608|ref|YP_001602069.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542240|ref|YP_002274469.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786185|emb|CAP55767.1| putative ribonucleotide reductase small subunit [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209529917|gb|ACI49854.1| Ribonucleoside-diphosphate reductase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 353

 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 1/121 (0%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDE+LH      +      ENP +WT   +     +  +    E A+       G V G
Sbjct: 213 VRDETLHCLSMARLFRVFIQENPEIWTDALRADIVQICRDIVEHEDAFIDLCFEMGPVEG 272

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L+    + Y++FIA+RR + +GL+ ++    NP PW+ ++++  +  NFFE R TEY + 
Sbjct: 273 LDGDLVKTYIRFIADRRLNLLGLDGIYDVPSNPLPWVDDMLNAVEHTNFFENRSTEYSRA 332

Query: 120 A 120
           +
Sbjct: 333 S 333


>gi|149728153|ref|XP_001502384.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit
           M2 (Ribonucleotide reductase small subunit)
           (Ribonucleotide reductase small chain) [Equus caballus]
          Length = 425

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 300 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFLTEALPVRLIGMN 352

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 353 CALMKQYIEFVADRLLLELGFNKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 407


>gi|212274629|ref|NP_001130908.1| hypothetical protein LOC100192012 [Zea mays]
 gi|195636980|gb|ACG37958.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYDLLR-------GKLDESRVREIVADAVDIEREFVCDALPVALVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 262 GGLMSQYIEFVADRLLMALGHRKMYN-VANPFDWM-ELISLQGKTNFFEKRVGEYQKAS 318


>gi|103487260|ref|YP_616821.1| ribonucleotide-diphosphate reductase subunit beta [Sphingopyxis
           alaskensis RB2256]
 gi|98977337|gb|ABF53488.1| Ribonucleoside-diphosphate reductase [Sphingopyxis alaskensis
           RB2256]
          Length = 354

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + +    E   L TK  ++       +   LE A+      +G V G
Sbjct: 189 IRDESLHCEGIIKLFHAFTKERGCL-TKAVKEDIIDTCQKTVRLEDAFIDLAFEQGPVPG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+G +P++   E+P PW++ +++  +  NFFETR TEY +G
Sbjct: 248 MTPKEIKRYIRYIADWRLGQLGFQPIYMIDEHPLPWLAPLLNGVEHANFFETRATEYSKG 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|260064013|ref|NP_001159403.1| ribonucleoside-diphosphate reductase subunit M2 isoform 1 [Homo
           sapiens]
          Length = 449

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 324 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 376

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 377 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 431


>gi|194690416|gb|ACF79292.1| unknown [Zea mays]
 gi|194704028|gb|ACF86098.1| unknown [Zea mays]
 gi|195619132|gb|ACG31396.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
 gi|223943167|gb|ACN25667.1| unknown [Zea mays]
          Length = 339

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + R ++ +A  +E  +  + +P   VG+N
Sbjct: 209 RDEGLHCDFACLLYDLLR-------GKLDESRVREIVADAVDIEREFVCDALPVALVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EYQ+ + 
Sbjct: 262 GGLMSQYIEFVADRLLMALGHRKMYN-VANPFDWM-ELISLQGKTNFFEKRVGEYQKASV 319

Query: 122 LK 123
           + 
Sbjct: 320 MS 321


>gi|297668213|ref|XP_002812343.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Pongo abelii]
          Length = 449

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 324 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 376

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 377 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 431


>gi|119621373|gb|EAX00968.1| hCG23833, isoform CRA_b [Homo sapiens]
 gi|119621374|gb|EAX00969.1| hCG23833, isoform CRA_b [Homo sapiens]
          Length = 449

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 324 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 376

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 377 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 431


>gi|225451453|ref|XP_002269951.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|147804660|emb|CAN64484.1| hypothetical protein VITISV_012640 [Vitis vinifera]
          Length = 329

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ ++  +E  +  + +P   VG+N
Sbjct: 200 RDEGLHCDFACLLYSLLR-------NKLSEERVKAIVADSVDIEREFVCDALPCALVGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G   ++  + NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 253 SALMSQYIEFVADRLLGALGYGKMYNVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKAS 309


>gi|75076796|sp|Q4R7Q7|RIR2_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|67969020|dbj|BAE00865.1| unnamed protein product [Macaca fascicularis]
          Length = 389

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 264 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRVEQEFLTEALPVKLIGMN 316

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 317 CTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 371


>gi|149408710|ref|XP_001506085.1| PREDICTED: similar to 5,10-methenyltetrahydrofolate synthetase
           [Ornithorhynchus anatinus]
          Length = 394

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++ + ++  A  +E  +  E +P   +G+N
Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEERVKEIIINAVRIEQEFLTEALPVKLIGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +FK  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 322 CTLMKQYIEFVADRLLLELGFSKIFK-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 376


>gi|82538850|ref|XP_723858.1| ribonucleotide reductase small chain [Plasmodium yoelii yoelii str.
           17XNL]
 gi|145580416|pdb|2P1I|A Chain A, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580417|pdb|2P1I|B Chain B, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580418|pdb|2P1I|C Chain C, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580419|pdb|2P1I|D Chain D, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580420|pdb|2P1I|E Chain E, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580421|pdb|2P1I|F Chain F, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580422|pdb|2P1I|G Chain G, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580423|pdb|2P1I|H Chain H, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|23478298|gb|EAA15423.1| Ribonucleotide reductase, small chain [Plasmodium yoelii yoelii]
          Length = 349

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P       +   + ++ EA  +E ++  E++P   +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLENKLP-------ENVVQNIVKEAVEVERSFICESLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKVF-HSKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 333


>gi|149721713|ref|XP_001493623.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) [Equus
           caballus]
          Length = 351

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P   +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVDLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 335


>gi|316971821|gb|EFV55552.1| ribonucleotide reductase R2 subunit [Trichinella spiralis]
          Length = 366

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  + + R ++ EA  +E  +  + +P   +G+N
Sbjct: 241 RDEGLHCDFACLLYS-------HLKKKPTEDRVRQIITEAVSIEQEFLTDALPVRLIGMN 293

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++++A+R   ++G   ++  +ENPF +M E+I L+ + NFFE RV EYQ+  
Sbjct: 294 CVLMSQYIEYVADRLLVELGCSKVYN-SENPFDFM-EMISLEGKTNFFEKRVGEYQKAG 350


>gi|159465291|ref|XP_001690856.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
           reinhardtii]
 gi|158279542|gb|EDP05302.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
           reinhardtii]
          Length = 493

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +++   ++ EA  LE  +  E +    +G+N
Sbjct: 360 RDEGLHCDFACCLYS-------HLKNRLSRERVLQIVDEAVQLEDEFCTEALSCELLGMN 412

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T NPF WM E+I L+ + NFFE RV EYQ+  
Sbjct: 413 ADLMRQYIRFVADRLLVSLGYEKHYN-TRNPFDWM-EMISLQGKANFFERRVGEYQRAG 469


>gi|38232564|gb|AAR15079.1| ribonucleotide reductase R2 subunit variant [Aedes albopictus]
          Length = 219

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  Q++   ++ EA L+E  +  + +P   +G+N
Sbjct: 94  RDEGLHTDFACLMF-------KYLVQKPSQERVIEIIREAVLIEQEFLTKALPVDLLGMN 146

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G++ ++  T+NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 147 CELMSQYIEFVADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQK 201


>gi|4894211|gb|AAD32302.1| ribonucleotide reductase small subunit [Glycine max]
          Length = 339

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++   P +       +   ++HEA  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHCDFACLLYSLLR--KPLI-----SDQVHKLVHEAVEIETEFVCDALPCALIGMN 262

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +   ENPF WM E I L+ + NFFE RV +YQ+ +
Sbjct: 263 SVLMSQYIKFVADRLLVALGYQRKYN-VENPFDWM-EFISLQGKANFFERRVGDYQKAS 319


>gi|225320685|dbj|BAH29738.1| ribonucleoside-diphosphate reductase subunit M2 [Dicyema japonicum]
          Length = 337

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K + P       + +   ++ EA +LE  +  E +P   +G+N
Sbjct: 209 RDEGLHTDFACLLYHHLKKKLP-------RDRILQIITEAVVLEKEFLTEALPVALIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G +  + Y +NPF +M E I L  + NFFE RV EYQ+
Sbjct: 262 VNLMSQYIEFVADRLIIELGYDKHY-YAQNPFDFM-ENISLSGKTNFFEKRVGEYQR 316


>gi|209877302|ref|XP_002140093.1| ribonucleotide-diphosphate reductase, small subunit
           [Cryptosporidium muris RN66]
 gi|209555699|gb|EEA05744.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Cryptosporidium muris RN66]
          Length = 346

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +FG  +   +    P+   +E       ++ EA  +E A+  +++P   +G+N
Sbjct: 221 RDEGIHADFGCLLYKTLNNRLPYGRVQE-------IIAEAVEVERAFLCDSLPVDLIGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    + +  ++  T NPF WM ++I L+ + NFFE RV EYQ   
Sbjct: 274 SRLMAQYIEFVADRLLFALDVPKIYNVT-NPFDWM-DLISLQGKTNFFEKRVAEYQMAG 330


>gi|157126966|ref|XP_001654749.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti]
 gi|15638625|gb|AAL05057.1|AF411297_1 ribonucleotide reductase 2 [Aedes aegypti]
 gi|82469974|gb|ABB77235.1| ribonucleotide reductase small subunit R2 [Aedes aegypti]
 gi|108873070|gb|EAT37295.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti]
          Length = 397

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  Q++   ++ EA L+E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLMFK-------YLVQKPSQERVIEIIREAVLIEQEFLTKALPVDLLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G++ ++  T+NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 325 CDLMSQYIEFVADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQK 379


>gi|291412327|ref|XP_002722439.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Oryctolagus
           cuniculus]
          Length = 400

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 275 RDEGLHCDFACLMFK-------HLVHKPSEQRVQEIIVNAVRIEQEFLTEALPVKLIGMN 327

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 328 CALMKQYIEFVADRLLLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 382


>gi|296082342|emb|CBI21347.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 6/108 (5%)

Query: 17  QIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI 72
           QI IEN H    L  K  +++ + ++ ++  +E  +  + +P   VG+N+    QY++F+
Sbjct: 102 QIAIENIHSEILLRNKLSEERVKAIVADSVDIEREFVCDALPCALVGMNSALMSQYIEFV 161

Query: 73  ANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A+R    +G   ++  + NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 162 ADRLLGALGYGKMYNVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKAS 207


>gi|221060582|ref|XP_002260936.1| ribonucleotide reductase small subunit [Plasmodium knowlesi strain
           H]
 gi|193811010|emb|CAQ42908.1| ribonucleotide reductase small subunit,putative [Plasmodium
           knowlesi strain H]
          Length = 349

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P       ++  + ++ EA  +E ++  E++P   +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLENKLP-------EEVVQNIVKEAVEVERSFICESLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G   +F + +NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 277 SRLMSQYIEFVADRLLECLGSRKIF-HAKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 333


>gi|296282225|ref|ZP_06860223.1| ribonucleotide-diphosphate reductase subunit beta [Citromicrobium
           bathyomarinum JL354]
          Length = 354

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 6/123 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---IAYAHETMPKGF 57
           +RDESLH    I + ++  +     +TK  ++    +  ++  LE   I  A E  P   
Sbjct: 189 VRDESLHCEGIIRLFHEF-VRERDCYTKAVKEDIIDICQKSVRLEDNFIDLAFEMGP--V 245

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
            G+ A   ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NFFE R TEY 
Sbjct: 246 SGMTAKEIKKYIRYIADWRLGQLGLQPIYMIDEHPLPWLTPLLNGVEHANFFEQRATEYS 305

Query: 118 QGA 120
           +GA
Sbjct: 306 KGA 308


>gi|118383611|ref|XP_001024960.1| ribonucleoside-diphosphate reductase, beta subunit family protein
           [Tetrahymena thermophila]
 gi|89306727|gb|EAS04715.1| ribonucleoside-diphosphate reductase, beta subunit family protein
           [Tetrahymena thermophila SB210]
          Length = 376

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +   N  L  +E  +    ++ EA  +E  +  E +P   +G+N
Sbjct: 251 RDEGLHTDFACLLYSML---NKKLTKEEIYE----IITEAVEIEKEFISEALPVELIGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +   +QY++F+A+R    +G+ P F  ++NPF WM ++I ++ + NFFE RV EYQ+ 
Sbjct: 304 SNMMKQYLEFVADRLLFALGV-PKFYNSKNPFEWM-DMISIQGKTNFFEKRVGEYQKA 359


>gi|260909050|gb|ACX54162.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909052|gb|ACX54163.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909054|gb|ACX54164.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909056|gb|ACX54165.1| RR2 protein [Shrimp white spot syndrome virus]
          Length = 349

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 8/118 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   ++ +  ++ P       +++   ++ EA  +E  +   ++P   VG+N
Sbjct: 235 RDEGLHRDFACMLLKKGFVDTPS------RERILEIVTEAVRIEQEFLTVSLPVKLVGMN 288

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A++   ++GLE  +  T NPFP+M   I L+ + NFFE RV EYQ+ 
Sbjct: 289 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN-ISLENKTNFFEKRVAEYQRA 344


>gi|294945135|ref|XP_002784568.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239897674|gb|EER16364.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 238

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N +       +T+   ++   ++  A  +E  +  E++P   +G+N
Sbjct: 96  RDEGLHADFACLLYNMMH------YTRLPDERVHEIVRGAVDVERVFISESLPVSLIGMN 149

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    +Y++F+A+R    +G   L+  T NPF WM ++I L+ + NFFE RV EYQ+G 
Sbjct: 150 SQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWM-KMISLQGKTNFFEKRVGEYQKGG 206


>gi|73974202|ref|XP_858105.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 4 [Canis familiaris]
          Length = 374

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 18/135 (13%)

Query: 2   RDESLHLNFG-------IDVINQIKIENPHLWTKEFQQKSRT--MLHEATLLEIA----- 47
           RDE LH +F        ++  ++ ++    +   E +Q SR   M+  +  LEIA     
Sbjct: 226 RDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQVSREAYMISTSLFLEIATCRSK 285

Query: 48  --YAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 105
             +  E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ +
Sbjct: 286 HEFLTEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGK 343

Query: 106 KNFFETRVTEYQQGA 120
            NFFE RV EYQ+ A
Sbjct: 344 TNFFEKRVAEYQRFA 358


>gi|126303832|ref|XP_001381111.1| PREDICTED: similar to hCG23833, [Monodelphis domestica]
          Length = 493

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  ++K + ++  A  +E  +  E +P   +G+N
Sbjct: 368 RDEGLHCDFACLMFK-------HLVHKPSEEKVKEIIINAVRIEQEFLTEALPVKLIGMN 420

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 421 CTLMKQYIEFVADRLMLELGFSKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 475


>gi|66822029|ref|XP_644369.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|66823381|ref|XP_645045.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|41019487|sp|P42521|RIR2_DICDI RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|29611978|gb|AAB72227.2| ribonucleotide reductase small subunit [Dictyostelium discoideum]
 gi|60472492|gb|EAL70444.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|60472997|gb|EAL70945.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
          Length = 338

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   +  +++ + +P +  K        M+ +A   E  +  E++P   +G+
Sbjct: 206 RDEGLHCDFACLLYTKLQRKLDPKVIEK--------MIRDAVECEKEFICESLPVDLIGM 257

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           N+ S  QY++F A+R    +G + +F  + NPF WM E+I L+++ NFFE +V EY +
Sbjct: 258 NSRSMSQYIEFCADRLVVSLGYKKIFN-SSNPFEWM-EMISLQRKSNFFEGKVAEYAK 313


>gi|330804590|ref|XP_003290276.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
 gi|325079602|gb|EGC33194.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
          Length = 335

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 13/119 (10%)

Query: 2   RDESLHLNFGIDVINQI--KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           RDE LH NF   +  ++  K+E+  L           ++ +A + E  +  +++P   +G
Sbjct: 201 RDEGLHCNFACLLYTKLINKLESKTL---------EAIIRDAVVCEKEFICDSLPVDLIG 251

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           +N+ S  QY++F A+R    +G + ++    NPF WM E+I L+++ NFFE +V EY +
Sbjct: 252 MNSRSMSQYIEFCADRLLVSLGYKKIYN-ASNPFDWM-EMISLQRKTNFFEGKVAEYAK 308


>gi|302904131|ref|XP_003049009.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256729943|gb|EEU43296.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 389

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + + HL  +  +Q  + ++ +A  +E  +  E +P   +G+N
Sbjct: 252 RDEGLHTDFAC-------LLHSHLKGRASKQVIQDIITDAVTIEQEFLTEALPCALLGMN 304

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A   +QY++F+A+R    +G E ++K + NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 305 ADLMKQYIEFVADRLLVALGNEKVYK-SANPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 362

Query: 122 L 122
           L
Sbjct: 363 L 363


>gi|224046583|ref|XP_002198998.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 362

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       +L  +  +++   ++  A  +E  +  E +P G +G+N
Sbjct: 237 RDEGLHCDFACLMFH-------YLVNRPSEERVCEIIVNAVEIEQEFLTEALPVGLIGMN 289

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+A+R   ++G   +F   ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 290 CTLMKQYIEFVADRLLMELGFSKVFN-VENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 346


>gi|7672989|gb|AAF66689.1|AF144620_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
           virus]
          Length = 413

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 8/118 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   ++ +  ++ P       +++   ++ EA  +E  +   ++P   VG+N
Sbjct: 250 RDEGLHRDFACMLLKKGFVDTPS------RERILEIVTEAVRIEQEFLTVSLPVKLVGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A++   ++GLE  +  T NPFP+M   I L+ + NFFE RV EYQ+ 
Sbjct: 304 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN-ISLENKTNFFEKRVAEYQRA 359


>gi|322693757|gb|EFY85606.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
           acridum CQMa 102]
          Length = 411

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + + HL  +  +Q    ++ +A  +E  +  E +P   +G+N
Sbjct: 273 RDEGLHTDFAC-------LLHSHLKNRASKQIIHDIITDAVAIEKEFLTEALPCALLGMN 325

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++F+A+R    +G E ++K T NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 326 SNLMKQYIEFVADRLLVALGNEKVYK-TSNPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 383

Query: 122 L 122
           L
Sbjct: 384 L 384


>gi|46122063|ref|XP_385585.1| hypothetical protein FG05409.1 [Gibberella zeae PH-1]
          Length = 399

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + + HL  +  +Q  + ++ +A  +E  +  E +P   +G+N
Sbjct: 262 RDEGLHTDFAC-------LLHSHLKGRASKQMIQDIITDAVSIEQEFLTEALPCALLGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++F+A+R    +G E ++K T NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 315 SNLMKQYIEFVADRLLVALGNEKVYKST-NPFDFM-ENISLGGKTNFFEKRVADYQKAGV 372

Query: 122 L 122
           L
Sbjct: 373 L 373


>gi|17158292|ref|NP_477710.1| wsv188 [Shrimp white spot syndrome virus]
 gi|14189948|gb|AAK55515.1|AF267731_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
           virus]
 gi|15021490|gb|AAK77767.1|AF369029_98 ORF98, putative ribonucleotide reductase small subunit (RR2)
           [shrimp white spot syndrome virus]
 gi|17016586|gb|AAL33192.1| wsv188 [shrimp white spot syndrome virus]
 gi|19481835|gb|AAL89111.1| WSSV243 [shrimp white spot syndrome virus]
          Length = 413

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 8/118 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   ++ +  ++ P       +++   ++ EA  +E  +   ++P   VG+N
Sbjct: 250 RDEGLHRDFACMLLKKGFVDTPS------RERILEIVTEAVRIEQEFLTVSLPVKLVGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A++   ++GLE  +  T NPFP+M   I L+ + NFFE RV EYQ+ 
Sbjct: 304 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN-ISLENKTNFFEKRVAEYQRA 359


>gi|89268988|emb|CAJ81953.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
           tropicalis]
 gi|89269815|emb|CAJ81580.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 386

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++   ++ +A  +E  +  E +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HLVNKPSEERVVQLITDAVQIEQEFLTEALPVNLIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +FK T NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 314 CTLMKQYIEFVADRLLLELGFNKVFKAT-NPFDFM-ENISLEGKTNFFEKKVGEYQK 368


>gi|294890631|ref|XP_002773236.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239878288|gb|EER05052.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 350

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N +       +T+   ++   ++  A  +E  +  E++P   +G+N
Sbjct: 208 RDEGLHADFACLLYNMMH------YTRLPDERVHEIVRGAVDVERVFISESLPVSLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    +Y++F+A+R    +G   L+  T NPF WM ++I L+ + NFFE RV EYQ+G 
Sbjct: 262 SQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWM-KMISLQGKTNFFEKRVGEYQKGG 318


>gi|56118690|ref|NP_001007890.1| ribonucleotide reductase M2, gene 2 [Xenopus (Silurana) tropicalis]
 gi|51258920|gb|AAH80161.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 386

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++   ++ +A  +E  +  E +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HLVNKPSEERVVQLITDAVQIEQEFLTEALPVNLIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +FK T NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 314 CTLMKQYIEFVADRLLLELGFNKVFKAT-NPFDFM-ENISLEGKTNFFEKKVGEYQK 368


>gi|322709430|gb|EFZ01006.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
           anisopliae ARSEF 23]
          Length = 414

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + + HL  +  +Q    ++ +A  +E  +  E +P   +G+N
Sbjct: 276 RDEGLHTDFAC-------LLHSHLKNRASKQVIYDIITDAVAIEQEFLTEALPCALLGMN 328

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +   +QY++F+A+R    +G E ++K T NPF +M E I L  + NFFE RV +YQ+   
Sbjct: 329 SNLMKQYIEFVADRLLVALGNEKVYK-TSNPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 386

Query: 122 L 122
           L
Sbjct: 387 L 387


>gi|332045030|gb|EGI81223.1| Ribonucleoside-diphosphate reductase [Lacinutrix algicola 5H-3-7-4]
          Length = 327

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 8/121 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       +   HL  K  +++ R +L +A  +E  +  E++P   +G+N
Sbjct: 199 RDEGMHCDFAV------HLHEHHLINKVPKERIREILVDALNIEREFITESLPVSLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+ +     +G E  +  T NPF +M ++I L+ + NFFE RV+EYQ+   
Sbjct: 253 SKLMSQYLEFVTDGLLQDLGCEKEYG-TANPFDFM-DMISLQGKTNFFEKRVSEYQKAGV 310

Query: 122 L 122
           L
Sbjct: 311 L 311


>gi|1710399|sp|P50649|RIR2_PLAFG RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|349790|gb|AAA29754.1| ribonucleotide reductase R2 subunit [Plasmodium falciparum]
          Length = 322

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 70/121 (57%), Gaps = 11/121 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEI--AYAHETMPKGFVG 59
           RDE LH +F   + + +  + P       +Q  + ++ EA  +E+  ++  E++P   +G
Sbjct: 195 RDEGLHTDFNCLIYSLLDNKLP-------EQMVQNIVKEAGGVEVEKSFICESLPCDLIG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +N+    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE RV +YQ+ 
Sbjct: 248 MNSRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWM-DLISLQGKTNFFEKRVADYQKS 305

Query: 120 A 120
            
Sbjct: 306 G 306


>gi|145553335|ref|XP_001462342.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124430181|emb|CAK94969.1| unnamed protein product [Paramecium tetraurelia]
          Length = 355

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   HL  K   Q+   ++  A  +E  +  E +P   +G+N
Sbjct: 230 RDEGLHTDFAC-------LLYKHLVNKMSNQRIHEIISSAVEIEKEFISEALPVELIGMN 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +   +QY++F+A+R    +G   ++  ++NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 283 SNLMKQYIEFVADRLIFALGAPKIYN-SKNPFEWM-DMISLQGKTNFFERRVGDYQKAG 339


>gi|167519412|ref|XP_001744046.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778008|gb|EDQ91624.1| predicted protein [Monosiga brevicollis MX1]
          Length = 329

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K + P       +++   ++ +A  +E  +    +P G +G+N
Sbjct: 204 RDEGLHTDFACLMFSMLK-KRPS------KERVTGIIMDAVEIEQDFLTNALPCGLLGMN 256

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A   +QY++F+++R    +G E +F  +ENPF +M E I ++ + NFFE RV EYQ+  
Sbjct: 257 ATLMKQYIEFVSDRLLVALGCEKIFN-SENPFDFM-ESISIEGKTNFFEKRVGEYQKAG 313


>gi|291244313|ref|XP_002742041.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Saccoglossus kowalevskii]
          Length = 463

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  +++ R ++ +A  +E  + +E +P G +G+N
Sbjct: 337 RDEGLHCDFACLIFS-------HLTYKPSKERIRNIITQAVDIEKEFWNEALPVGLIGMN 389

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                 Y++F+A+R   ++  + ++ + ENPF +M E I L+ + NFFE RV EYQ+ 
Sbjct: 390 VTLMNYYVEFVADRLLLELNCDKVY-HRENPFDFM-ENISLEGKTNFFEKRVGEYQKA 445


>gi|156102402|ref|XP_001616894.1| ribonucleoside-diphosphate reductase small chain [Plasmodium vivax
           SaI-1]
 gi|148805768|gb|EDL47167.1| ribonucleoside-diphosphate reductase small chain, putative
           [Plasmodium vivax]
          Length = 349

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P       ++  + ++ EA  +E ++  E++P   +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLENKLP-------EEVVQNIVKEAVEVERSFICESLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G   +F + +NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 277 SRLMSQYIEFVADRLLECLGSPKIF-HAKNPFNWM-DLISLQGKTNFFEKRVADYQKSG 333


>gi|148234092|ref|NP_001079369.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus laevis]
 gi|27371032|gb|AAH41209.1| MGC52676 protein [Xenopus laevis]
          Length = 386

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++   ++ +A  +E  +  E +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HLIRKPSEERVVELITDAVQIEQEFLTEALPVNLIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G + +FK T NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 314 CTLMKQYIEFVADRLLLELGFKKVFKAT-NPFDFM-ENISLEGKTNFFEKKVGEYQK 368


>gi|187903099|ref|YP_001883390.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
           domestica salivary gland hypertrophy virus]
 gi|187384748|gb|ACD03521.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
           domestica salivary gland hypertrophy virus]
          Length = 343

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 66/117 (56%), Gaps = 8/117 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F + +  +  +  P       +++   ++ EA  +E  +  + +P   +G+N
Sbjct: 211 RDEGMHCDFAVLLFKRYLVNRPS------EERVGEIVREAVTIEQEFLTDALPVSLIGMN 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R    +G++ ++  T+NPF +M ++I L  + NFFE RV +YQ+
Sbjct: 265 CGLMSQYIEFVADRLLVDLGMKRIYN-TKNPFDFM-DMISLDGKTNFFEKRVGDYQR 319


>gi|301117384|ref|XP_002906420.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
 gi|262107769|gb|EEY65821.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
          Length = 379

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + +++  + P     E  + + T+ HE       +  +++P   +G+N
Sbjct: 254 RDEGMHTDFACLLYSKLVTKLPESRVHEIVRDAVTIEHE-------FVRDSLPVELIGMN 306

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R  + +G+  ++ + +NPF WM ++I L+ + NFFE RV EY +  
Sbjct: 307 SGLMCQYIEFVADRLLYSLGVSKIY-HAKNPFDWM-DMISLQGKTNFFEKRVGEYSKAG 363


>gi|312889900|ref|ZP_07749444.1| Ribonucleoside-diphosphate reductase [Mucilaginibacter paludis DSM
           18603]
 gi|311297432|gb|EFQ74557.1| Ribonucleoside-diphosphate reductase [Mucilaginibacter paludis DSM
           18603]
          Length = 343

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H  F   + + +         K  ++   T++ +A  +E  +  + +P   +G+N
Sbjct: 217 RDEGMHCEFACLLYSMLS-------NKLSKEAVTTIIADAVEIEKEFVTDALPVNLIGMN 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++G + L+  T NPF +M E+I L+ + NFFE RV +YQ+   
Sbjct: 270 AKLMSQYIEFVADRWLQELGYDKLYHAT-NPFDFM-EMISLQGKTNFFEKRVGDYQKSGV 327

Query: 122 LKWD 125
           L  D
Sbjct: 328 LNND 331


>gi|291276761|ref|YP_003516533.1| ribonucleoside-diphosphate reductase subunit beta [Helicobacter
           mustelae 12198]
 gi|290963955|emb|CBG39794.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           mustelae 12198]
          Length = 344

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I  +K E P L+ K+ +++   M   A  +E A+         +GL 
Sbjct: 221 RDEVTHLILFQNMIRTLKKERPDLFDKDLEEEIVEMFRRAVEIEAAWGEYITQGQILGLT 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
                QY+Q++A++R  ++G+  L+   E+P  W+ +     +++ NFFE +VT Y +G+
Sbjct: 281 GEVIHQYIQYLADQRLSKVGMPKLYN-VEHPIKWVEQYASFNEQRTNFFEAKVTNYAKGS 339


>gi|118474076|ref|YP_891239.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           fetus subsp. fetus 82-40]
 gi|118413302|gb|ABK81722.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           fetus subsp. fetus 82-40]
          Length = 340

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T E + K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFTSEVEAKIYEMFKKAGDLEIEWGKYITGNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ + R   IGL+ L+   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDDRLTSIGLKKLYN-AKHPIKWVDDFAKFNDQKSNFFESKVTNYSKGS 334


>gi|929959|gb|AAA74020.1| ribonuleotide reductase small subunit [Urechis caupo]
          Length = 399

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  Q++   ++ +A  +E ++  E +P   +G+N
Sbjct: 271 RDEGLHCDFACLMFS-------HLKNKPSQERVYDIIRDAVRIEQSFLTEALPVNLIGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G  P     ENPF +M   I L+ + NFFE RV EYQ+
Sbjct: 324 CKLMAQYIEFVADRLLLELGC-PKIWNVENPFDFMDN-ISLEGKTNFFEKRVGEYQK 378


>gi|168186576|ref|ZP_02621211.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum C str. Eklund]
 gi|169295422|gb|EDS77555.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum C str. Eklund]
          Length = 342

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K EN  ++T+   ++ R M+      EI +         +G+N
Sbjct: 214 RDEITHLILFQNIIKELKNENLDIFTESIIEEFRMMMKTGVEHEIKWGQYVTNNEILGIN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E+Y+++++N R + IGLE L+ + TE+P  W+     L   K +FFE +VT Y + 
Sbjct: 274 NNLIEKYIKYLSNLRLNAIGLEVLYPEITEHPMEWIENFSKLNNTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AAFDFD 339


>gi|34482564|emb|CAE09564.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN [Wolinella
           succinogenes]
          Length = 283

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN +K E P L+TK  +++   M  +A  +E A+         +GL 
Sbjct: 159 RDEVTHLLIFQNMINALKKERPDLFTKSLEEEVVEMFRKAVAVESAWGDYITQGQILGLT 218

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +    +Y+Q++A+ R  ++G+ P+    ++P  W+ +     ++K NFFE  VT Y +G+
Sbjct: 219 SEIIHEYIQYLADDRLKRVGM-PILYNAKHPIKWVDQFSSFNEQKTNFFEGNVTNYAKGS 277


>gi|161760549|ref|NP_906664.2| ribonucleotide-diphosphate reductase subunit beta [Wolinella
           succinogenes DSM 1740]
          Length = 341

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN +K E P L+TK  +++   M  +A  +E A+         +GL 
Sbjct: 217 RDEVTHLLIFQNMINALKKERPDLFTKSLEEEVVEMFRKAVAVESAWGDYITQGQILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +    +Y+Q++A+ R  ++G+ P+    ++P  W+ +     ++K NFFE  VT Y +G+
Sbjct: 277 SEIIHEYIQYLADDRLKRVGM-PILYNAKHPIKWVDQFSSFNEQKTNFFEGNVTNYAKGS 335


>gi|224129040|ref|XP_002328875.1| predicted protein [Populus trichocarpa]
 gi|222839305|gb|EEE77642.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 200 RDEGLHCDFACLLYSLLR-------KKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 253 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEYQKAS 309


>gi|55742360|ref|NP_001007164.1| ribonucleoside-diphosphate reductase subunit M2 B [Danio rerio]
 gi|29561808|emb|CAD87804.1| novel protein similar to vertebrate ribonucleotide reductase M2 B
           (TP53 inducible) (RRM2B) [Danio rerio]
          Length = 349

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH NF   +I    ++ P +       +   ++ +A  +E  +  E +P   +G+N
Sbjct: 224 RDEGLHCNFAC-LIYSYLVKKPSV------DRVNDIIAKAVSIEQEFLTEALPVNLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R    +GL P    +ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 277 CSLMKQYIEFVADRLLTDLGL-PKAYCSENPFDFM-ESISLEGKTNFFEKRVAEYQR 331


>gi|28393533|gb|AAO42187.1| putative ribonucleoside-diphosphate reductase small chain
           [Arabidopsis thaliana]
          Length = 243

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++       TK  + + + ++ +A  +E  +  + +    VG+N
Sbjct: 111 RDEGLHCDFACLIYSLLR-------TKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMN 163

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G   ++  T NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 164 RELMSQYIEFVADRLLAALGCGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGEYQKAS 220


>gi|145352915|ref|XP_001420779.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581014|gb|ABO99072.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 346

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +  ENP L  K   Q    ++ +A  +E  +  + +    VG+N
Sbjct: 220 RDEGLHCDFACLLYSML--ENP-LSEKVLHQ----LVGDAVTIEKEFVCDALSCSLVGMN 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A     Y++F+A+R   Q+G+  L+    NPF WM E+I L+ + NFFE RV +YQ+   
Sbjct: 273 ANMMSTYIEFVADRLLLQLGVSKLYNAV-NPFDWM-ELISLQGKANFFEHRVDQYQKAGV 330

Query: 122 LK 123
           ++
Sbjct: 331 MQ 332


>gi|291220709|ref|XP_002730368.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Saccoglossus kowalevskii]
          Length = 402

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  QQ+   ++ +A  +E  +  + +P   +G+N
Sbjct: 277 RDEGLHCDFACLMFS-------HLTNKPSQQRIIEIIRDAVKIEQEFLTDALPVSLIGMN 329

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R    +G   ++   ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 330 KDLMKQYIEFVADRLLLDLGCNKIYN-KENPFDFM-ENISLEGKTNFFEKRVGEYQK 384


>gi|126662515|ref|ZP_01733514.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
           bacterium BAL38]
 gi|126625894|gb|EAZ96583.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
           bacterium BAL38]
          Length = 325

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 70/124 (56%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + + H+  K  +++   ++ +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGMHCDFAV------HLHSHHIVNKVPKERITEIIVDALNIERQFITESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+ +R   ++G + ++  + NPF +M ++I L+ + NFFE RV EYQ+   
Sbjct: 252 ATLMTQYLEFVTDRLLVELGCDRVYN-SSNPFDFM-DMISLQGKTNFFEKRVAEYQKAGV 309

Query: 122 LKWD 125
           +  D
Sbjct: 310 MNSD 313


>gi|85710107|ref|ZP_01041172.1| ribonucleotide reductase beta subunit [Erythrobacter sp. NAP1]
 gi|85688817|gb|EAQ28821.1| ribonucleotide reductase beta subunit [Erythrobacter sp. NAP1]
          Length = 346

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDE+LH   GI  +     E     TK  ++    +  +   LE A+       G V G
Sbjct: 189 VRDETLHCE-GIIKMFHTFCEERDCLTKAVKEDIIDICQKTVRLEDAFIDLAFEMGPVEG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           + A   ++Y+++IA+ R  Q+ L+P++   E+P PW+S +++  +  NFFE R TEY +G
Sbjct: 248 MTAKDIKKYIRYIADWRLGQLNLQPIYMIDEHPLPWLSPLLNGVEHANFFEARATEYSKG 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|9633651|ref|NP_051729.1| ribonucleotide reductase, small subunit [Myxoma virus]
 gi|6523870|gb|AAF14903.1|AF170726_19 ribonucleotide reductase, small subunit [Myxoma virus]
 gi|301134541|gb|ADK63655.1| M015L [Myxoma virus]
          Length = 322

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K   P       +++  +++ EA ++E  +  E +P   +G+N
Sbjct: 198 RDEGLHCDFACLMFKHLK-HTPS------EERVASIIKEAVVIEQRFLTEALPVRLIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G   +F  T NPF +M E I L+ + NFFE RV++YQ+
Sbjct: 251 CELMCQYIEFVADRLIAELGYSKIFSAT-NPFDFM-ENISLEGKTNFFEKRVSDYQR 305


>gi|170664480|gb|ACB28637.1| small subunit ribonucleotide reductase [Myxoma virus]
 gi|170664652|gb|ACB28808.1| small subunit ribonucleotide reductase [recombinant virus
           6918VP60-T2]
          Length = 322

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K   P       +++  +++ EA ++E  +  E +P   +G+N
Sbjct: 198 RDEGLHCDFACLMFKHLK-HTPS------EERVASIIKEAVVIEQRFLTEALPVRLIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G   +F  T NPF +M E I L+ + NFFE RV++YQ+
Sbjct: 251 CELMCQYIEFVADRLIAELGYSKIFSAT-NPFDFM-ENISLEGKTNFFEKRVSDYQR 305


>gi|255079598|ref|XP_002503379.1| predicted protein [Micromonas sp. RCC299]
 gi|226518645|gb|ACO64637.1| predicted protein [Micromonas sp. RCC299]
          Length = 335

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + I         K  +   R ++ EA  +E  +  + +P   VG+N
Sbjct: 208 RDEGLHRDFACLLYSYIN-------KKPNESVVRQIVKEAVEIEKEFVCDALPCALVGMN 260

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    +Y++F+A+    Q+G+   +    NPF WM E+I L+ + NFFE RV EYQ+  
Sbjct: 261 ADLMSEYIEFVADHLLGQLGMSKEYN-AANPFDWM-ELISLQGKTNFFEKRVGEYQKSG 317


>gi|315635423|ref|ZP_07890689.1| ribonucleotide-diphosphate reductase beta subunit [Arcobacter
           butzleri JV22]
 gi|315480181|gb|EFU70848.1| ribonucleotide-diphosphate reductase beta subunit [Arcobacter
           butzleri JV22]
          Length = 339

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T+E ++  R M  +A  LE ++         +G  
Sbjct: 215 RDEVTHLLLFQNMINSVRKERPDLFTQELEETVRAMFRKAVDLEASWGAYITQGQILGFT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
                QY++++A+RR   +G +  +   ++P PW+        ++ NFFE  V  Y +G+
Sbjct: 275 DGIIRQYIEYLADRRLEAVGYKAEYG-VKHPIPWVDGYASFNDQRTNFFEGNVVNYSKGS 333


>gi|49899161|gb|AAH75746.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
          Length = 386

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL +K  ++  + ++  A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HLISKPSEETVKKIIMNAVEIEQEFLTDALPVKLIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G + +++  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 314 CDLMKQYIEFVADRLLLELGFDKVYR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 368


>gi|298713498|emb|CBJ27053.1| Ribonucleoside-diphosphate reductase small chain [Ectocarpus
           siliculosus]
          Length = 504

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   ++        K  ++    ++ EA  +E ++    +P   +G+N
Sbjct: 374 RDEGLHCDFACQLFASLE-------NKPSRETVMAIVREAVEVEKSFICGALPCSLIGMN 426

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           A    QY++F+A+R    +G    +  T+NPF WM ++I L+ + NFFE RV EYQ+ 
Sbjct: 427 AGVMSQYIEFVADRLLGSLGYGKSYG-TQNPFDWM-DLISLQGKTNFFEKRVGEYQKA 482


>gi|218197485|gb|EEC79912.1| hypothetical protein OsI_21460 [Oryza sativa Indica Group]
          Length = 345

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + + ++ +A  +E  +  + +P   VG+N
Sbjct: 215 RDEGLHCDFACLLYDLLR-------GKLDESRVQEIVADAVDIEREFVCDALPVALVGMN 267

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++    NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 268 GELMSQYIEFVADRLLMALGCKKMYN-VANPFDWM-ELISLQGKTNFFEKRVGDYQKAS 324


>gi|10344|emb|CAA26307.1| unnamed protein product [Spisula solidissima]
          Length = 300

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  Q++   ++ EA  +E  +  E +P   +G+N
Sbjct: 172 RDEGLHCDFACLMFS-------HLVNKPSQERIHQIIDEAVKIEQVFLTEALPCRLIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++  + L+   ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 225 CDLMRQYIEFVADRLLLELKCDKLYN-KENPFDFM-EHISLEGKTNFFEKRVGEYQK 279


>gi|115466138|ref|NP_001056668.1| Os06g0127900 [Oryza sativa Japonica Group]
 gi|55296211|dbj|BAD67929.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|113594708|dbj|BAF18582.1| Os06g0127900 [Oryza sativa Japonica Group]
 gi|186920368|gb|ACC95437.1| ribonucleotide diphosphate reductase small subunit 2 [Oryza sativa
           Japonica Group]
 gi|215706414|dbj|BAG93270.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222634884|gb|EEE65016.1| hypothetical protein OsJ_19968 [Oryza sativa Japonica Group]
          Length = 345

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  + + + ++ +A  +E  +  + +P   VG+N
Sbjct: 215 RDEGLHCDFACLLYDLLR-------GKLDESRVQEIVADAVDIEREFVCDALPVALVGMN 267

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++    NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 268 GELMSQYIEFVADRLLMALGCKKMYN-VANPFDWM-ELISLQGKTNFFEKRVGDYQKAS 324


>gi|266918|sp|P07201|RIR2_SPISO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit;
           AltName: Full=p41
 gi|10342|emb|CAA38919.1| M2 (small) subunit of ribonucleotide reductase [Spisula
           solidissima]
          Length = 384

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  Q++   ++ EA  +E  +  E +P   +G+N
Sbjct: 256 RDEGLHCDFACLMFS-------HLVNKPSQERIHQIIDEAVKIEQVFLTEALPCRLIGMN 308

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++  + L+   ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 309 CDLMRQYIEFVADRLLLELKCDKLYN-KENPFDFM-EHISLEGKTNFFEKRVGEYQK 363


>gi|221120499|ref|XP_002159812.1| PREDICTED: similar to hCG23833 [Hydra magnipapillata]
          Length = 387

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   H+  K  +++ + ++ +A  +EI +  E++P   +G+N
Sbjct: 255 RDEGLHCDFAC-------LMYKHIVNKPSEERVKQIIRDAVAIEIEFLTESLPCDLLGMN 307

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               + Y++F A+R  + +G    +   ENPF +M E I L ++ NFFE+RV++YQ+  
Sbjct: 308 KSLMKTYIEFCADRLINALGYSKEWN-VENPFDFM-ENISLARKANFFESRVSDYQKAG 364


>gi|188996383|ref|YP_001930634.1| Ribonucleoside-diphosphate reductase [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931450|gb|ACD66080.1| Ribonucleoside-diphosphate reductase [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 326

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 3/116 (2%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           DESLHL  GI+ I  +  ENP +    +F +  R  + +A  LE+ Y         + G+
Sbjct: 209 DESLHLQNGIEAILTMVEENPEIVDDYQFVENIRQSIIDAVELELNYLKTKFGGTTIFGV 268

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           +    E+YM++IA+RR  ++G +P F   +NP  ++ +  D+KK  NFFE   TEY
Sbjct: 269 SYGELERYMKYIADRRLIELGFDPQFGIDQNPLKFLQKE-DVKKLTNFFEVSSTEY 323


>gi|157736292|ref|YP_001488975.1| ribonucleotide-diphosphate reductase subunit beta [Arcobacter
           butzleri RM4018]
 gi|157698146|gb|ABV66306.1| ribonucleoside-diphosphate reductase, beta chain [Arcobacter
           butzleri RM4018]
          Length = 339

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T E ++  R M  +A  LE ++         +G  
Sbjct: 215 RDEVTHLLLFQNMINSVRKERPDLFTSELEETVRAMFRKAVDLEASWGAYITQGQILGFT 274

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
                QY++++A+RR   +G +  +   ++P PW+        ++ NFFE  V  Y +G+
Sbjct: 275 DGIIRQYIEYLADRRLEAVGYKAEYG-VKHPIPWVDGYASFNDQRTNFFEGNVVNYSKGS 333


>gi|256421019|ref|YP_003121672.1| ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
           2588]
 gi|256035927|gb|ACU59471.1| Ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
           2588]
          Length = 323

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F   +   ++   P       +++  T++ +A  +E  +  + +P   +G+N
Sbjct: 198 RDEGLHCEFACLLYGMLENRLP-------EEQVHTIIRDAVAIEKEFITDALPVALIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    +Y++F+A+R   ++G   +F  T NPF +M E+I L+ + NFFE RV +YQ+  
Sbjct: 251 SKLMSEYIEFVADRWLSELGYTKIFN-TANPFDFM-EMISLQGKTNFFEKRVGDYQKAG 307


>gi|315452596|ref|YP_004072866.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter felis
           ATCC 49179]
 gi|315131648|emb|CBY82276.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter felis
           ATCC 49179]
          Length = 347

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL     +I+ +K E P L++K+  ++   M  EA  LE  +         + LN
Sbjct: 223 RDEVTHLALFQSMIHTLKKERPDLFSKDLVEEILEMFKEAVDLESTWGRVITQGEILDLN 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
             +   Y++++A+ R H IGL P   +T++P  W+ +      ++ NFFE RV+ Y +G+
Sbjct: 283 PVTLRAYIEYLADTRLHAIGL-PKIYHTKHPMRWVDQFSSFNSQRSNFFEARVSNYSKGS 341


>gi|324519017|gb|ADY47264.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
          Length = 376

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  +++   ++ EA  +E  Y  E +P G +G+N
Sbjct: 251 RDEGLHRDFACLMFS-------HLKKKPNKERIYEIIREAVKIEQEYLTEALPVGLIGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++++A+    ++    L+   ENPF +M+  I ++ + NFFE RV+EYQ+   
Sbjct: 304 CELMSQYIEYVADHLLTELKCPKLYN-MENPFDFMAR-ISIEAKTNFFEKRVSEYQKAGV 361

Query: 122 LKWD 125
           L  D
Sbjct: 362 LSTD 365


>gi|290977320|ref|XP_002671386.1| predicted protein [Naegleria gruberi]
 gi|284084954|gb|EFC38642.1| predicted protein [Naegleria gruberi]
          Length = 338

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 67/118 (56%), Gaps = 8/118 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K      +TK  QQ   +++ EA  +E  +  E++P   +G+N
Sbjct: 212 RDEGLHTDFACLLYSTLK------FTKLPQQVVHSLVSEAVEIEKEFICESLPVDLIGMN 265

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +   +QY++ +A+R    +G + ++  + NPF WM+ +I +  + NFFE +V EY + 
Sbjct: 266 SRLMQQYIEMVADRLLVSLGYDKIYN-SPNPFDWMN-IISVSGKTNFFEKKVGEYAKA 321


>gi|145349720|ref|XP_001419276.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579507|gb|ABO97569.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 329

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +         K  ++  R ++ EA  +E  +  +++P   VG+N
Sbjct: 201 RDEGLHRDFACLLFSMLN-------NKPSEETIRKIVTEAVEIEKEFVCDSLPCALVGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A     Y++++A+     +GL   +  T NPF WM E+I L+ + NFFE RV EYQ+  
Sbjct: 254 AGMMSDYIEYVADHLFCSLGLAKEYN-TTNPFDWM-ELISLQGKTNFFEKRVGEYQKAG 310


>gi|79160106|gb|AAI08038.1| Rrm2b protein [Danio rerio]
          Length = 349

 Score = 67.0 bits (162), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH NF         +   +L  K    +   ++ +A  +E  +  E +P   +G+N
Sbjct: 224 RDEGLHCNFAC-------LMYSYLVKKPSVDRVNDIIAKAVSIEQEFLTEALPVNLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R    +GL P    +ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 277 CSLMKQYIEFVADRLLTDLGL-PKAYCSENPFDFM-ESISLEGKTNFFEKRVAEYQR 331


>gi|289620013|emb|CBI53457.1| unnamed protein product [Sordaria macrospora]
          Length = 410

 Score = 67.0 bits (162), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q  + ++ +A  +E  +  E +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNNRPSKQLIQDIIVDAVRIEQEFLTEALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A   +QY++F+A+R    +G E +++ T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 325 ADLMKQYIEFVADRLLVALGNEKVYRST-NPFDFM-ENISLGGKTNFFEKRVADYQKAG 381


>gi|91081999|ref|XP_969259.1| PREDICTED: similar to AGAP006818-PA [Tribolium castaneum]
 gi|270007377|gb|EFA03825.1| hypothetical protein TcasGA2_TC013940 [Tribolium castaneum]
          Length = 374

 Score = 67.0 bits (162), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  +++ ++++ +A  +E  +  E +P   +G+N
Sbjct: 250 RDEGLHCDFACLMFS-------HLVQKPSKERIQSIIQDAVKIEKEFLTEALPVSMIGMN 302

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R   ++G E ++  ++NPF +M+ +I  + + NFFE +V EYQ+  
Sbjct: 303 CALMCQYIEFVADRLLGELGCEKIYN-SQNPFDFMT-IISNEGKTNFFEKKVGEYQKSG 359


>gi|187778605|ref|ZP_02995078.1| hypothetical protein CLOSPO_02200 [Clostridium sporogenes ATCC
           15579]
 gi|187772230|gb|EDU36032.1| hypothetical protein CLOSPO_02200 [Clostridium sporogenes ATCC
           15579]
          Length = 342

 Score = 67.0 bits (162), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I ++K ENP+++T+E +++ R M+      EI +         +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKSENPNIFTEELEEEFREMMRMGVEHEIKWGQYVTNNEILGLN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               ++Y+++++N R   IGL+PL+ +  ++P  W+     L   K +FFE +VT Y + 
Sbjct: 274 DELIDKYIKYLSNLRLTAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333

Query: 120 AELKWD 125
           A   +D
Sbjct: 334 AVFDFD 339


>gi|325261084|ref|ZP_08127822.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           D5]
 gi|324032538|gb|EGB93815.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           D5]
          Length = 347

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     ++ ++K E P L+T E  +K R+M+ E    EI + H  +     GLN
Sbjct: 219 RDENTHLWLFRSILMELKKEEPWLFTAEKTEKYRSMIREGCEQEIRWGHYVIGDDIQGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+Q++ N RC  + LEP+++  E       W+S+  +    K +FFE R T Y 
Sbjct: 279 REMITDYIQYLGNLRCRGLELEPVYEGHEKEPESMSWVSQFSNANMIKTDFFEARSTAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|237752265|ref|ZP_04582745.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           winghamensis ATCC BAA-430]
 gi|229376507|gb|EEO26598.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           winghamensis ATCC BAA-430]
          Length = 343

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E PHL+TK+  ++   M  EA  +E  +         +GL 
Sbjct: 219 RDEVTHLLLFQNMINSLRKEMPHLFTKDLIEEVLEMFREAVRVESTWGEYITQGQILGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +    +Y++++A+ R  ++GL  L+    +P  W+       ++K NFFE  VT Y +G+
Sbjct: 279 SEIIHEYIRYLADNRLTRVGLPALYN-ARHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 337


>gi|260061082|ref|YP_003194162.1| putative ribonucleoside-diphosphate reductase small chain
           [Robiginitalea biformata HTCC2501]
 gi|88785214|gb|EAR16383.1| probable ribonucleoside-diphosphate reductase small chain
           [Robiginitalea biformata HTCC2501]
          Length = 328

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H ++ +       + N HL  K  +++   ++  A  +E  +  E++P   +G+N
Sbjct: 199 RDEGMHCDYAV------HLHNNHLVNKVPKERITQIITNALDIEREFITESLPVSLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+ +R   ++  E ++  T NPF +M ++I L+ + NFFE RV+EYQ+  
Sbjct: 253 AKLMTQYLEFVTDRLLVELECEKVYNST-NPFDFM-DMISLQGKTNFFEKRVSEYQKAG 309


>gi|15606660|ref|NP_214040.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5]
 gi|18202109|sp|O67475|RIR2_AQUAE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit;
           Contains: RecName: Full=Aae nrdB intein; AltName:
           Full=Aae RIR2 intein
 gi|2983879|gb|AAC07431.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5]
          Length = 696

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 7   HLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCE 66
           H+    ++IN ++ ENP L+T E ++        A   EI +         +G+N    E
Sbjct: 577 HVTLFRNIINTLRKENPELFTPEIEKWIVEYFKYAVNEEIKWGQYVTQNQILGINDVLIE 636

Query: 67  QYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGAELKW 124
           +Y++++ N R  QIG +P++ + TENP  W+ E   +   K +FF+ +   Y +  ELKW
Sbjct: 637 RYIKYLGNLRITQIGFDPIYPEVTENPLKWIDEFRKINNTKTDFFQAKPQTYSKANELKW 696


>gi|195119943|ref|XP_002004488.1| GI19586 [Drosophila mojavensis]
 gi|193909556|gb|EDW08423.1| GI19586 [Drosophila mojavensis]
          Length = 393

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVMMFR-------HLVQRPSRERIIEIISDAVTIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+
Sbjct: 321 CALMSQYIEFVADRLLVELGVGKIYN-TKNPFTFM-EMISLDGKTNFFEKKVGEYQR 375


>gi|158286793|ref|XP_308927.4| AGAP006818-PA [Anopheles gambiae str. PEST]
 gi|157020637|gb|EAA04227.4| AGAP006818-PA [Anopheles gambiae str. PEST]
          Length = 400

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 67/117 (57%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++   ++ +A L+E  +  + +P   +G+N
Sbjct: 275 RDEGLHCDFACLMFK-------YLVQKPSKERVTEIIRDAVLIEQEFLTKALPVDMLGMN 327

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G E ++ +T+NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 328 CDLMSQYIEFVADRLLLELGCEKIY-HTKNPFSFM-EFISLEGKTNFFEKKVGEYQK 382


>gi|323143005|ref|ZP_08077711.1| ribonucleoside-diphosphate reductase, beta subunit [Succinatimonas
           hippei YIT 12066]
 gi|322417199|gb|EFY07827.1| ribonucleoside-diphosphate reductase, beta subunit [Succinatimonas
           hippei YIT 12066]
          Length = 331

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 10/125 (8%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLH-----EATLLEIAYAHETMPK 55
           + DE+LH    I +  +   +NP LW  + +    ++       E + +++A+    M K
Sbjct: 199 INDETLHTESMIKLFREYIEQNPQLWNDDLKSTIYSIAEKMVELEDSFIDLAFGVNQMQK 258

Query: 56  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
               L     ++Y++FIA+RR   +G++ +F   +NP PW+  ++ +    NFFE RV +
Sbjct: 259 ----LAKEDVKKYIRFIADRRLSAMGMKAIFNEKKNPLPWVDAMLGV-THTNFFENRVVD 313

Query: 116 YQQGA 120
           Y +GA
Sbjct: 314 YAKGA 318


>gi|145537171|ref|XP_001454302.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124422057|emb|CAK86905.1| unnamed protein product [Paramecium tetraurelia]
          Length = 507

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   H+  K   Q+   ++  A  +E  +  E +P   +G+N
Sbjct: 382 RDEGLHTDFAC-------LLYKHMINKLSIQRVHEIISSAVEIEKEFISEALPVELIGMN 434

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +   +QY++F+A+R    +G   ++  ++NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 435 SNLMKQYIEFVADRLIFALGAPKIYN-SKNPFEWM-DMISLQGKTNFFERRVGDYQKAG 491


>gi|67585619|ref|XP_665115.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis TU502]
 gi|54655552|gb|EAL34885.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis]
          Length = 296

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K + P         + + ++ EA  +E  +  +++P   +G+N
Sbjct: 171 RDEGLHADFACLIYKALKFKLP-------APRVQQIISEAVEVERNFLCDSLPVDLIGMN 223

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    + +  ++  + NPF WM ++I L+ + NFFE RV EYQ   
Sbjct: 224 SRLMAQYIEFVADRLLFALDIPKIYNVS-NPFDWM-DLISLQGKTNFFEKRVGEYQMAG 280


>gi|312130971|ref|YP_003998311.1| ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
           17132]
 gi|311907517|gb|ADQ17958.1| Ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
           17132]
          Length = 328

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      ++  K  +++  T++ +A  +E  +  + +P   +G+N
Sbjct: 202 RDEGLHRDFACLLYTK------YIVNKLPEEQVYTIIKDAVEIEKEFVSDALPVSLIGMN 255

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           AP   QY++F+A+     + L+ ++  T NPF +M ++I L+ + NFFE RV EYQ+  
Sbjct: 256 APQMCQYIEFVADHLLESLNLKKVYNAT-NPFDFM-DLISLQGKTNFFEKRVGEYQKAG 312


>gi|18859327|ref|NP_571525.1| ribonucleoside-diphosphate reductase subunit M2 [Danio rerio]
 gi|292624782|ref|XP_002665783.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Danio rerio]
 gi|3914657|sp|P79733|RIR2_DANRE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase protein R2 class
           I; AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1695831|gb|AAB37103.1| ribonucleotide reductase protein R2 class I [Danio rerio]
 gi|27881838|gb|AAH44355.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
 gi|56207929|emb|CAI21240.1| ribonucleotide reductase M2 polypeptide [Danio rerio]
 gi|182889152|gb|AAI64707.1| Rrm2 protein [Danio rerio]
          Length = 386

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  ++  + ++  A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HLINKPSEETVKKIIMNAVEIEQEFLTDALPVKLIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G + +++  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 314 CDLMKQYIEFVADRLLLELGFDKVYR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 368


>gi|114568952|ref|YP_755632.1| ribonucleotide-diphosphate reductase subunit beta [Maricaulis maris
           MCS10]
 gi|114339414|gb|ABI64694.1| Ribonucleoside-diphosphate reductase [Maricaulis maris MCS10]
          Length = 345

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + +    E   L T+E +            LE  +       G V G
Sbjct: 197 IRDESLHCEGMIKLFHAFAEETGAL-TQEVKDDITECCRTVVGLEDKFIDLAFEAGDVEG 255

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     + Y+++IA+ R  Q+GL  ++   E+P PW+SE+++  +  NFFE R TEY +G
Sbjct: 256 MTPDDIKTYIRYIADWRLGQLGLPKIYGVKEHPLPWLSEILNGVEHANFFEARATEYSKG 315

Query: 120 A 120
           A
Sbjct: 316 A 316


>gi|66475262|ref|XP_627447.1| ribonucleotide reductase small subunit, duplicated adjacent gene
           [Cryptosporidium parvum Iowa II]
 gi|9652154|gb|AAF91416.1|AF275635_1 ribonucleotide reductase R2 subunit [Cryptosporidium parvum]
 gi|46228920|gb|EAK89769.1| ribonucleotide reductase small subunit, duplicated adjacent gene
           [Cryptosporidium parvum Iowa II]
          Length = 352

 Score = 66.6 bits (161), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K + P         + + ++ EA  +E  +  +++P   +G+N
Sbjct: 227 RDEGLHADFACLIYKALKFKLP-------APRVQQIISEAVEVERNFLCDSLPVDLIGMN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    + +  ++  + NPF WM ++I L+ + NFFE RV EYQ   
Sbjct: 280 SRLMAQYIEFVADRLLFALDIPKIYNVS-NPFDWM-DLISLQGKTNFFEKRVGEYQMAG 336


>gi|215401441|ref|YP_002332744.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
 gi|209483982|gb|ACI47415.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
          Length = 313

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 14/120 (11%)

Query: 2   RDESLHLNFGIDVIN---QIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           RDE LH NF     N     K++ P +           M  EA  +E+ +  E +P+  V
Sbjct: 191 RDEGLHTNFACLYYNTRVDQKLDVPTV---------SDMFAEAVAIEMEFFAEALPESLV 241

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           G+NA    +Y++F+A+R   Q+   P   +TENPF +M+  I L+ + NFFE RV EY++
Sbjct: 242 GMNAEMMRKYIEFVADRLLVQLKY-PKIYHTENPFEFMNN-ISLEGKTNFFEKRVGEYKR 299


>gi|298207002|ref|YP_003715181.1| probable ribonucleoside-diphosphate reductase small chain
           [Croceibacter atlanticus HTCC2559]
 gi|83849636|gb|EAP87504.1| probable ribonucleoside-diphosphate reductase small chain
           [Croceibacter atlanticus HTCC2559]
          Length = 325

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 69/124 (55%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + N HL  K  +++ R ++ +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGMHCDFAV------HLHNKHLVNKVSKERIREIIVDALNIEREFITESLPASLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+ +R   ++  E  +  T NPF +M ++I L+ + NFFE RV +YQ+   
Sbjct: 252 SNLMTQYLEFVTDRLLLELECEKEYN-TANPFDFM-DMISLQGKTNFFEKRVGDYQKAGV 309

Query: 122 LKWD 125
           +  D
Sbjct: 310 MDQD 313


>gi|223039245|ref|ZP_03609535.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           rectus RM3267]
 gi|222879606|gb|EEF14697.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           rectus RM3267]
          Length = 340

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T E + K   M   A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRTERPDLFTSEMEAKIYDMFKRAGELEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY++++ ++R   IGL+  +    +P  W+ +      +K NFFE +VT Y +G+
Sbjct: 276 DDIIEQYIRYLIDQRLVAIGLKRRYD-ARHPIKWVDDFAKFNDQKSNFFEAKVTNYSKGS 334


>gi|148230557|ref|NP_001080772.1| ribonucleotide reductase M2 polypeptide [Xenopus laevis]
 gi|28839018|gb|AAH47975.1| Rrm2-prov protein [Xenopus laevis]
          Length = 386

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++   ++  A  +E  +  E +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFR-------HLVHKPSEERVVQLITNAVQIEQEFLTEALPVNLIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G   +FK + NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 314 CTLMKQYIEFVADRLLLELGFNKVFKAS-NPFDFM-ENISLEGKTNFFEKRVGEYQK 368


>gi|255530602|ref|YP_003090974.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
           2366]
 gi|255343586|gb|ACU02912.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
           2366]
          Length = 324

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F   +   +K        K  Q++   ++ +A  +E  +  + +P   +G+N
Sbjct: 197 RDEGSHCEFACLLYGMLK-------NKLSQEQVHGIIRDAVEIEKEFVTDALPVALIGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++G   ++  T NPF +M E+I L+ + NFFE RV +YQ+   
Sbjct: 250 AKLMSQYIEFVADRWLQELGYSKIYNAT-NPFDFM-EMISLQGKTNFFEKRVGDYQKSGV 307

Query: 122 L 122
           L
Sbjct: 308 L 308


>gi|224100309|ref|XP_002311826.1| predicted protein [Populus trichocarpa]
 gi|222851646|gb|EEE89193.1| predicted protein [Populus trichocarpa]
          Length = 342

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++    H W     QK   ++ EA  +E  +  E +P   +G+N
Sbjct: 213 RDEGLHCDFACLLYSLLQ-RQLH-W-----QKVYHIVGEAVEIETKFVCEALPCALIGMN 265

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A     Y++F+A+R    +G +  +   ENPF WM E I L+ + NFFE RV +YQ+ +
Sbjct: 266 ATLMGDYIKFVADRLLVALGYQKKYN-VENPFDWM-EFISLQGKANFFERRVGDYQKAS 322


>gi|38229183|ref|NP_938276.1| 20L [Yaba monkey tumor virus]
 gi|38000454|gb|AAR07377.1| 20L [Yaba monkey tumor virus]
          Length = 325

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +   NP L     +   R ++ EA  +E  +  E MP   +G+N
Sbjct: 200 RDEGLHCDFACMMFKHLS--NPPL-----ENVIRDIVIEAVDIEKNFLTEAMPVKLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G +  +  ++NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 253 CDLMKQYIEFVADRLLLELGCKKYY-CSKNPFDFM-ENISLEGKTNFFEKRVSEYQK 307


>gi|12085003|ref|NP_073405.1| 20L protein [Yaba-like disease virus]
 gi|56404692|sp|Q9DHU2|RIR2_YLDV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|12056179|emb|CAC21258.1| 20L protein [Yaba-like disease virus]
          Length = 325

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         I   HL         R ++ EA  +E  +  E +P   +G+N
Sbjct: 200 RDEGLHCDFAC-------IMFKHLLNPPLNSVVRDIIIEAVNIEKNFLTEAIPVKLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G +  +  ++NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 253 CDLMKQYIEFVADRLLLELGCDKYY-CSKNPFDFM-ENISLEGKTNFFEKRVSEYQK 307


>gi|171687074|ref|XP_001908478.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943498|emb|CAP69151.1| unnamed protein product [Podospora anserina S mat+]
          Length = 409

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q    ++ +A  +E  +  E +P   +G+N
Sbjct: 271 RDEGLHTDFACLLFS-------HLNNRPSKQLVEDIIRDAVTIEQEFLTEALPCALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +   +QY++F+A+R    +G + +++ T NPF +M E I L  + NFFE RV EYQ+  
Sbjct: 324 SNLMKQYIEFVADRLLVALGNDKIYRST-NPFDFM-ENISLGGKTNFFEKRVGEYQKAG 380


>gi|319953269|ref|YP_004164536.1| ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
           14237]
 gi|319421929|gb|ADV49038.1| Ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
           14237]
          Length = 326

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 70/124 (56%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + N H+  +  +++   +L +A  +E  +  E++P   +G+N
Sbjct: 198 RDEGMHCDFAV------HLHNKHIINQVPKERITEILVDALNIEREFITESLPASLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+ +R   ++  + ++  T NPF +M ++I ++ + NFFE RV+EYQ+   
Sbjct: 252 SKLMTQYLEFVTDRLLVELECDKVYNST-NPFDFM-DMIGMEGKTNFFEKRVSEYQKAGV 309

Query: 122 LKWD 125
           L  D
Sbjct: 310 LNSD 313


>gi|332185556|ref|ZP_08387304.1| ribonucleotide reductase, small chain family protein [Sphingomonas
           sp. S17]
 gi|332014534|gb|EGI56591.1| ribonucleotide reductase, small chain family protein [Sphingomonas
           sp. S17]
          Length = 351

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + +    E   L TK  +            LE  +       G V G
Sbjct: 189 VRDESLHCEGIIQLFHAFTKERQCL-TKAVKDDIADQCQTTVRLEDNFIDLAFEMGPVNG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           + A   ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MTAKDIKKYIRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRATEYSKA 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|328771482|gb|EGF81522.1| hypothetical protein BATDEDRAFT_16297 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 336

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +         K      + ++HEA  +E  ++ E++P   +G+N
Sbjct: 210 RDEGLHTDFACLLFTLLN-------NKPTDSVIQQIIHEAVTIEQEFSTESLPVALIGMN 262

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A   +QY++F+A+R   ++G+ P      NPF +M ++I L+ + NFFE RV EYQ+  
Sbjct: 263 ANLMKQYIEFVADRLFIELGM-PKKYGVGNPFDFM-DMISLQGKTNFFEKRVGEYQKSG 319


>gi|62637405|ref|YP_227403.1| Ribonucleotide reductase small subunit [Deerpox virus W-848-83]
 gi|115503265|gb|ABI99183.1| ribonucleotide reductase small subunit [Deerpox virus W-848-83]
          Length = 321

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q+ +  P         +   ++ EA  +E ++  + +P   +G+N
Sbjct: 196 RDEGLHCDFACLMFKQL-LYPPS------TSRIINIIVEAVSIEKSFLTKALPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G   +FK +ENPF +M E I L+ + NFFE RV++YQ+
Sbjct: 249 CELMCQYIEFVADRLLSELGCNKIFK-SENPFDFM-ESISLEGKTNFFEKRVSDYQK 303


>gi|86132508|ref|ZP_01051102.1| ribonucleoside-diphosphate reductase small chain [Dokdonia
           donghaensis MED134]
 gi|85817069|gb|EAQ38253.1| ribonucleoside-diphosphate reductase small chain [Dokdonia
           donghaensis MED134]
          Length = 328

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 68/122 (55%), Gaps = 8/122 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F +       + N HL  K  +++   ++  A  +E  +  E++P   +G+N
Sbjct: 198 RDEGVHCDFAV------HLHNHHLVNKVPKERITEIIVNALDIEREFITESLPVSLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++++ +R   ++  E ++  T NPF +M ++I L+ + NFFE RV EYQ+   
Sbjct: 252 SNLMTQYLEYVTDRLLTELDCEKVYN-TANPFDFM-DMISLQGKTNFFEKRVGEYQKAGV 309

Query: 122 LK 123
           +K
Sbjct: 310 VK 311


>gi|85109237|ref|XP_962820.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
           OR74A]
 gi|30316285|sp|Q9C167|RIR2_NEUCR RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|16273691|gb|AAK14804.2| small subunit of ribonucleotide reductase [Neurospora crassa]
 gi|28924456|gb|EAA33584.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
           OR74A]
          Length = 410

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q  + ++ +A  +E  +  E +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNNRPSKQLIQEIIVDAVRIEQEFLTEALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A   +QY++F+A+R    +G E +++ T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 325 ADLMKQYIEFVADRLLVALGNEKIYRST-NPFDFM-ENISLGGKTNFFEKRVGDYQKAG 381


>gi|294877483|ref|XP_002768004.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239870142|gb|EER00722.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 247

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 64/112 (57%), Gaps = 8/112 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +FG  + N +K      +T+  +++   ++  A  +E  +  + +P G +G+N
Sbjct: 120 RDEGLHTDFGCLLYNMLK------FTRLPEERVEDIVRSAVNVEREFITDALPVGLIGMN 173

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113
           A    +Y++F+A+R    +G   ++  + NPF WM+ +I L+ + NFFE RV
Sbjct: 174 AELMGRYIEFVADRLLVALGYAKIYN-SANPFDWMT-MISLQGKTNFFEKRV 223


>gi|72008642|ref|XP_780110.1| PREDICTED: similar to ribonucleotide reductase protein R2 class I
           isoform 1 [Strongylocentrotus purpuratus]
 gi|115928579|ref|XP_001179668.1| PREDICTED: similar to ribonucleotide reductase protein R2 class I
           [Strongylocentrotus purpuratus]
          Length = 412

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  ++  + ++ EA  +E  +  + +P   +G+N
Sbjct: 282 RDEGLHCDFACLMFK-------HLNNKPDEEHVQGIIKEAVAIEQEFLTDALPCSLIGMN 334

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           A   ++Y++F+A+R   ++G   ++K  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 335 AVLMKRYIEFVADRLLVELGCGKIWK-VENPFDFM-ENISLEGKTNFFEKRVGEYQK 389


>gi|225849393|ref|YP_002729557.1| ribonucleoside-diphosphate reductase subunit beta
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644764|gb|ACN99814.1| ribonucleoside-diphosphate reductase, beta subunit
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 326

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 3/116 (2%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKGFV-GL 60
           DESLHL  GI+ I  +  ENP +     F +  R  + +A  LE+ Y         + G+
Sbjct: 209 DESLHLQNGIEAILTMVEENPEIVDDYNFVENIRQSIIDAVELELNYLKTKFGGTTIFGV 268

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           +    E+YM++IA+RR  ++G +P F   +NP  ++ +  D+KK  NFFE   TEY
Sbjct: 269 SYNELERYMKYIADRRLVELGFDPQFGIDQNPLKFLQKE-DVKKLTNFFEVSSTEY 323


>gi|195401438|ref|XP_002059320.1| GJ18335 [Drosophila virilis]
 gi|194142326|gb|EDW58732.1| GJ18335 [Drosophila virilis]
          Length = 394

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHCDFAVLMFQ-------HLVQRPCRERIIEIISDAVTIEQEFLTDALPVNLIGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                +Y++F+A+R   ++G+  L+  T+NPF +M E+I L  + NFFE +V EYQ+
Sbjct: 322 CALMSEYIEFVADRLLVELGVGKLYN-TKNPFTFM-EMISLDGKTNFFEKKVGEYQR 376


>gi|210616053|ref|ZP_03290925.1| hypothetical protein CLONEX_03144 [Clostridium nexile DSM 1787]
 gi|210149961|gb|EEA80970.1| hypothetical protein CLONEX_03144 [Clostridium nexile DSM 1787]
          Length = 355

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++K E P L+T+++  + R+M+ E    EI + H  +     GLN
Sbjct: 227 RDENTHLWLFRNILIELKKEQPDLFTEQYIDEYRSMIKEGCEQEIKWGHYVIGDDVQGLN 286

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+Q++ N RC  +G  P+++  E       W+S+  +    K +FFE R T Y 
Sbjct: 287 REMITDYVQYLGNLRCTNLGFAPIYEGHETEPESMRWVSQYSNANAIKTDFFEARSTAYA 346

Query: 118 QGAEL 122
           + + L
Sbjct: 347 KSSAL 351


>gi|325286576|ref|YP_004262366.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
 gi|324322030|gb|ADY29495.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
          Length = 328

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 67/119 (56%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H ++ +       + N HL  K  +++   +L +A  +E  +  E++P   +G+N
Sbjct: 199 RDEGMHCDYAV------HLHNHHLINKVPKERITEILVDALDIEREFITESLPVSLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+ +R   ++  + ++  T NPF +M ++I L+ + NFFE RV EYQ+  
Sbjct: 253 SKLMTQYLEFVTDRLLVELNCDKVYNST-NPFDFM-DMISLQGKTNFFEKRVAEYQKSG 309


>gi|302783485|ref|XP_002973515.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
 gi|302787555|ref|XP_002975547.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
 gi|300156548|gb|EFJ23176.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
 gi|300158553|gb|EFJ25175.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
          Length = 347

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + + +       K  +++ + ++ +A  +E  +  E +    VG+N
Sbjct: 217 RDEGLHCDFACLLYSLLNV-------KLDEKRVKEIVSDAVEIERQFVCEALSCDLVGMN 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY+ F+A+R    +G   LF    NPF WM ++I L+ + NFFE RV EYQ+ +
Sbjct: 270 ARLMSQYIDFVADRLMVVLGYNKLFNAI-NPFDWM-DLISLQGKTNFFEKRVGEYQKAS 326


>gi|188588149|ref|YP_001919720.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           botulinum E3 str. Alaska E43]
 gi|251778737|ref|ZP_04821657.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|188498430|gb|ACD51566.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E3 str. Alaska E43]
 gi|243083052|gb|EES48942.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 344

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 2/123 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ ENP  +T + + + + M+      EI + H  +     G+N
Sbjct: 218 RDENTHLWLFRNIIKELQSENPESFTTDLKNELKEMMRIGVENEILWGHYVIGDKIQGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               E Y++++ N+R  +IGL  LF+ + ENP  W+  V +    K +FFE + T Y + 
Sbjct: 278 KKLIEDYIKYLGNKRLKEIGLGMLFEGFEENPATWVDVVANSNSVKTDFFEAKSTAYAKV 337

Query: 120 AEL 122
           + L
Sbjct: 338 STL 340


>gi|119360103|gb|ABL66780.1| At5g40942 [Arabidopsis thaliana]
          Length = 231

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 6/108 (5%)

Query: 17  QIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI 72
           QI IEN H    L TK  + + + ++ +A  +E  +  + +    VG+N     QY++F+
Sbjct: 103 QIAIENIHSEILLRTKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMNRELMSQYIEFV 162

Query: 73  ANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A+R    +G   ++  T NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 163 ADRLLAALGCGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGEYQKAS 208


>gi|195333568|ref|XP_002033462.1| GM20395 [Drosophila sechellia]
 gi|195582581|ref|XP_002081105.1| GD25870 [Drosophila simulans]
 gi|194125432|gb|EDW47475.1| GM20395 [Drosophila sechellia]
 gi|194193114|gb|EDX06690.1| GD25870 [Drosophila simulans]
          Length = 393

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+
Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVAEYQR 375


>gi|227501022|ref|ZP_03931071.1| ribonucleoside-diphosphate reductase [Anaerococcus tetradius ATCC
           35098]
 gi|227216795|gb|EEI82193.1| ribonucleoside-diphosphate reductase [Anaerococcus tetradius ATCC
           35098]
          Length = 352

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 4/123 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +IN +K E   L+  E Q   R ML E    EIA+    +     GLN
Sbjct: 224 RDENTHLWLFRSLINDLKKEREDLFVPELQNYYRNMLKEGVEQEIAWGKYAIGNEIAGLN 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +GLE L++ + E P    W+ E  D    K +FFE +VT Y 
Sbjct: 284 EKMIEDYIKYLGNLRAKGLGLEALYEGFDEIPESMKWVDEYSDPNGVKTDFFEAKVTAYS 343

Query: 118 QGA 120
           + +
Sbjct: 344 KSS 346


>gi|237749822|ref|ZP_04580302.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           bilis ATCC 43879]
 gi|229374572|gb|EEO24963.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           bilis ATCC 43879]
          Length = 351

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 3/125 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL     +I   + E P L+T+  Q +   M  +A  LE ++         +GL 
Sbjct: 226 RDEITHLTIFQQMIISTRKERPDLFTQALQDEVMEMFRQAVDLESSWGEYITQGQILGLT 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           A    QY++++A++R   +   P+   T+NP  W+ E ++   ++ NFFE +V  Y +G 
Sbjct: 286 AKIIRQYIEYLADKRLKAVDY-PILYNTQNPIQWVDEQVNFNNQRTNFFEAKVRNYTRG- 343

Query: 121 ELKWD 125
           ELK++
Sbjct: 344 ELKFE 348


>gi|294013210|ref|YP_003546670.1| ribonucleoside-diphosphate reductase beta chain [Sphingobium
           japonicum UT26S]
 gi|292676540|dbj|BAI98058.1| ribonucleoside-diphosphate reductase beta chain [Sphingobium
           japonicum UT26S]
          Length = 351

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDE+LH   GI  +    ++     T   +     M  +   +E A+       G V G
Sbjct: 189 VRDETLHCE-GIVRLFHAFVKERDCLTASVKDDIMDMCQKTVRIEDAFVDLVFEMGPVPG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRATEYSKA 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|195172750|ref|XP_002027159.1| GL20023 [Drosophila persimilis]
 gi|198459455|ref|XP_001361381.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
 gi|194112972|gb|EDW35015.1| GL20023 [Drosophila persimilis]
 gi|198136695|gb|EAL25959.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
          Length = 391

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 67/117 (57%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + + +       HL  +  +++   ++ +A  +E  +  E +P   +G+N
Sbjct: 266 RDEGLHCDFAVLMYH-------HLVQRPKRERIIEIIRDAVEIEQEFLTEALPVNLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+
Sbjct: 319 CVLMSQYIEFVADRLLGELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVAEYQR 373


>gi|17551968|ref|NP_497821.1| RiboNucleotide Reductase family member (rnr-2) [Caenorhabditis
           elegans]
 gi|1172941|sp|P42170|RIR2_CAEEL RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3873950|emb|CAA84688.1| C. elegans protein C03C10.3, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 381

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 67/117 (57%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + ++++        K  QQ+   ++ +A  +E  +  E +P   +G+N
Sbjct: 256 RDEGLHRDFACLLYSKLQ-------KKLTQQRIYDIIKDAVAIEQEFLTEALPVDMIGMN 308

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+    ++G + L+K ++NPF +M E I +  + NFFE RV+EYQ+
Sbjct: 309 CRLMSQYIEFVADHLLVELGCDKLYK-SKNPFDFM-ENISIDGKTNFFEKRVSEYQR 363


>gi|190896512|gb|ACE96769.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896530|gb|ACE96778.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|190896528|gb|ACE96777.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|211956300|ref|YP_002302368.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
 gi|115503095|gb|ABI99013.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
          Length = 321

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q+ +  P+        +   ++ EA  +E ++    +P   +G+N
Sbjct: 196 RDEGLHCDFACLMFKQL-LHPPN------PSRIINIIVEAVSIEKSFLTTALPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G   +FK +ENPF +M E I L+ + NFFE RV++YQ+
Sbjct: 249 CELMCQYIEFVADRLLSELGCTKIFK-SENPFDFM-ESISLEGKTNFFEKRVSDYQK 303


>gi|27923845|sp|Q9QTF2|RIR2_RSIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|5688956|dbj|BAA82755.1| ribonucleotide reductase small subunit [Red sea bream iridovirus]
 gi|327396894|dbj|BAK14260.1| ribonucleotide diphosphate reductase small subunit [Red sea bream
           iridovirus]
          Length = 312

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q+         K  Q  +  ++ +A  +E A+  E +    +G+N
Sbjct: 188 RDEGLHCDFACMLFRQMA-------NKPCQDDAHQIISDAVDIETAFFREALKTPLLGMN 240

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           + S + Y+QF+A+R    +G   ++  + NPF +M   I ++ + NFFE RV+EYQ+
Sbjct: 241 SDSMKLYIQFVADRLLDALGYAKMYNVS-NPFDFMDN-ISIEGKTNFFERRVSEYQR 295


>gi|190896544|gb|ACE96785.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|239502693|ref|ZP_04662003.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB900]
          Length = 309

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 7/125 (5%)

Query: 3   DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
           +E  HL+    +++ ++ EN  ++T+ F  K+  +   ++ +EI++  + + KG    N 
Sbjct: 189 EEGTHLDLFAHMLDTLRHENKDVFTQSFWNKALEVFLTSSEMEISWG-KYITKGVT--NP 245

Query: 63  PSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
            + E Y++ +AN R  QI   P   Y   +NPFPW+ +       EKNFFETRVT+Y+ G
Sbjct: 246 KAIEDYIKHLANLRAEQIQ-APFVPYPGVKNPFPWVEQFSKPNTSEKNFFETRVTDYKVG 304

Query: 120 AELKW 124
             L W
Sbjct: 305 GALVW 309


>gi|190896536|gb|ACE96781.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896560|gb|ACE96793.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896566|gb|ACE96796.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|301097698|ref|XP_002897943.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
 gi|262106388|gb|EEY64440.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
          Length = 360

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + +++  + P       + +   ++ +A  +E  +  +++P   +G+N
Sbjct: 235 RDEGMHTDFACLMYSKLVNKLP-------ESRVHEIIRDAVAIEHEFVCDSLPVELIGMN 287

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R  + +G+  ++   +NPF WM ++I L+ + NFFE RV EY +  
Sbjct: 288 SALMCQYIEFVADRLLYSLGVSKIYN-VKNPFDWM-DMISLQGKTNFFEKRVGEYSKAG 344


>gi|190896524|gb|ACE96775.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896534|gb|ACE96780.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|4836362|gb|AAD30422.1|AF117061_1 ribonucleotide reductase R2 subunit [Aedes albopictus]
          Length = 398

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  Q++   ++ EA L+E  +  + +P   +G+N
Sbjct: 273 RDEGLHTDFACLMFK-------YLVQKPSQERVIEIIREAVLIEQEFLTKALPVDLLGMN 325

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F A+R   ++G++ ++  T+NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 326 CELMSQYIEFEADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQK 380


>gi|292658982|gb|ADE34370.1| ribonucleotide reductase small chain [Turbot reddish body
           iridovirus]
          Length = 312

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q+         K  Q+ +  ++ +A  +E A+  E +    +G+N
Sbjct: 188 RDEGLHCDFACMLFRQMA-------NKPSQEDAHQIISDAVDIETAFFREALKTPLLGMN 240

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           + S   Y+QF+A+R    +G   ++    NPF +M   I ++ + NFFE RV+EYQ+
Sbjct: 241 SDSMRLYIQFVADRLLDALGYAKMYN-VANPFDFMDN-ISIEGKTNFFERRVSEYQR 295


>gi|328872436|gb|EGG20803.1| ribonucleotide reductase small subunit [Dictyostelium fasciculatum]
          Length = 335

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + N++   N  L  K  +    +++ +A   E  +  +++P   +G+N
Sbjct: 201 RDEGLHCDFACLLYNKL---NNKLDVKTIE----SIIRDAVECEKEFVTDSLPVDLIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    +Y++F A+R    +G + ++  + NPF WM E+I L ++ NFFE +V+EY +   
Sbjct: 254 SREMSKYIEFCADRLLVSLGYKKIYN-SANPFDWM-EMISLMRKANFFEGKVSEYAKAGV 311

Query: 122 LK 123
            K
Sbjct: 312 AK 313


>gi|156058956|ref|XP_001595401.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980]
 gi|154701277|gb|EDO01016.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 407

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q  + ++ EA  +E  +  E +P   +G+N
Sbjct: 266 RDEGLHTDFACLLFS-------HLKHRPSKQAVQDVITEAVEIEQEFLTEALPCALLGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +   +QY++F+A+R    +G + ++K + NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 319 STLMKQYIEFVADRLLVTLGNDKVYK-SANPFDFM-ENISLAGKTNFFEKRVGDYQKAG 375


>gi|307295356|ref|ZP_07575195.1| Ribonucleoside-diphosphate reductase [Sphingobium chlorophenolicum
           L-1]
 gi|306878859|gb|EFN10078.1| Ribonucleoside-diphosphate reductase [Sphingobium chlorophenolicum
           L-1]
          Length = 351

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDE+LH   GI  +    ++     T   +     M  +   +E A+       G V G
Sbjct: 189 VRDETLHCE-GIIRLFHAFVKERDCLTASVKDDIMDMCQKTVRIEDAFIDLVFEMGPVPG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRATEYSKA 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|110636874|ref|YP_677081.1| ribonucleoside-diphosphate reductase 1 subunit beta [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110279555|gb|ABG57741.1| ribonucleoside-diphosphate reductase 1, beta subunit [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 324

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 67/119 (56%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      ++  K   ++   ++ EA  +E  +  +++P   +G+N
Sbjct: 198 RDEGLHCDFACLLYTK------YINNKLPAERVIQIILEAVEIEKEFVTDSLPVDLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A   +QY++F+A+R    +G+   F  T NPF +M E+I L+ + NFFE RV+EYQ+  
Sbjct: 252 ARLMQQYIEFVADRLLVALGVPKQFNAT-NPFDFM-EMISLQGKTNFFEKRVSEYQKSG 308


>gi|297818266|ref|XP_002877016.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322854|gb|EFH53275.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 329

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K +         +++ ++++ +A  +E  +  + +P   VG+N
Sbjct: 198 RDEGLHCDFACLLYTLLKTKLS-------EERVKSIVCDAVEIEREFVCDALPCALVGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G   ++  T NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 251 RDLMSQYIEFVADRLLGALGYGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGDYQKAS 307


>gi|331086748|ref|ZP_08335825.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 9_1_43BFAA]
 gi|330409914|gb|EGG89349.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 9_1_43BFAA]
          Length = 347

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 67/125 (53%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ +++ E P L+++E +++ R M+ E    EIA+ H  +     GL+
Sbjct: 219 RDENTHLWLFTNILRELRKELPELFSEEKEKEYRQMIREGCEQEIAWGHYVIGDAVSGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N RC  +GL P+++  E       W+S+  +    K +FFE + T Y 
Sbjct: 279 CDMITDYVKYLGNLRCKNLGLAPIYEGHEKEPESMGWVSQFSNANMIKTDFFEAKSTAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|87198296|ref|YP_495553.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87133977|gb|ABD24719.1| Ribonucleoside-diphosphate reductase [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 351

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH   GI  +    ++     TK  ++       +   LE A+      +G V G
Sbjct: 189 VRDESLHCE-GITRLFHAFVKERGCLTKAVKEDIIDCCQKTVRLEDAFIDLAFEQGPVPG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           ++A   ++Y+++IA+ R  Q+GL  ++   ++P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MSAKEIKRYIRYIADWRLSQLGLPAIYMIEDHPLPWLAPLLNGVEHANFFETRATEYSKA 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|195485577|ref|XP_002091148.1| GE13485 [Drosophila yakuba]
 gi|194177249|gb|EDW90860.1| GE13485 [Drosophila yakuba]
          Length = 393

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+
Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVGEYQR 375


>gi|116191729|ref|XP_001221677.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
 gi|88181495|gb|EAQ88963.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
          Length = 409

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q    ++ +A  +E  +  E +P   +G+N
Sbjct: 271 RDEGLHTDFACLLFS-------HLNNRPSKQIIEDIIVDAVRIEQEFLTEALPCALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +   +QY++F+A+R    +G E +++ T NPF +M E I L  + NFFE RV EYQ+  
Sbjct: 324 SNLMKQYIEFVADRLLVALGNEKVYRST-NPFDFM-ENISLGGKTNFFEKRVGEYQKAG 380


>gi|325663145|ref|ZP_08151595.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 4_1_37FAA]
 gi|325470599|gb|EGC73829.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 4_1_37FAA]
          Length = 347

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 67/125 (53%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ +++ E P L+++E +++ R M+ E    EIA+ H  +     GL+
Sbjct: 219 RDENTHLWLFTNILRELRKELPELFSEEKEKEYRQMIREGCEQEIAWGHYVIGDAVSGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N RC  +GL P+++  E       W+S+  +    K +FFE + T Y 
Sbjct: 279 CDMITDYVKYLGNLRCKNLGLAPIYEGHEKEPESMGWVSQFSNANMIKTDFFEAKSTAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|18079279|ref|NP_525111.1| ribonucleoside diphosphate reductase small subunit [Drosophila
           melanogaster]
 gi|12644287|sp|P48592|RIR2_DROME RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|10727628|gb|AAF58599.2| ribonucleoside diphosphate reductase small subunit [Drosophila
           melanogaster]
 gi|15292183|gb|AAK93360.1| LD41588p [Drosophila melanogaster]
 gi|220946286|gb|ACL85686.1| CG8975-PA [synthetic construct]
 gi|220955972|gb|ACL90529.1| RnrS-PA [synthetic construct]
          Length = 393

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+
Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVGEYQR 375


>gi|194883840|ref|XP_001976005.1| GG22616 [Drosophila erecta]
 gi|190659192|gb|EDV56405.1| GG22616 [Drosophila erecta]
          Length = 393

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +   ++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKHERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+
Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVAEYQR 375


>gi|269105083|ref|ZP_06157778.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268160718|gb|EEZ39216.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 310

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 16/129 (12%)

Query: 2   RDESLHLNFG---IDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           RDE LH +F       + Q K+          QQ+   +  EA  +E  +  E +P   +
Sbjct: 190 RDEGLHFSFSALLFKTLGQGKVT---------QQEFEEICREAVSIEKEFVTEALPVDLI 240

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ- 117
           G+NA    QY++  A+      G +P+F Y +NPF +M  ++D++ + NFFE RVTEY+ 
Sbjct: 241 GMNAELMCQYIEHTADVIAGLFGFDPIF-YAKNPFDYM-RLLDMEGKTNFFEKRVTEYKR 298

Query: 118 -QGAELKWD 125
            Q  +L +D
Sbjct: 299 PQDRQLSFD 307


>gi|50311465|ref|XP_455757.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644893|emb|CAG98465.1| KLLA0F15103p [Kluyveromyces lactis]
          Length = 401

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   +   +K + NP +  K        ++ EA  +E  Y  + +P   +G+
Sbjct: 271 RDEGLHTDFACLLFAHLKNKPNPEIVEK--------IITEAVEIEKRYFMDALPVSLLGM 322

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY++F+A+R    +G +  F  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 323 NADLMNQYVEFVADRLLVALGNKKYFNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380


>gi|15232077|ref|NP_189342.1| TSO2 (TSO meaning 'ugly' in Chinese); oxidoreductase/
           ribonucleoside-diphosphate reductase/ transition metal
           ion binding [Arabidopsis thaliana]
 gi|75273949|sp|Q9LSD0|RIR2C_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain C;
           AltName: Full=Ribonucleoside-diphosphate reductase TSO2
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit C
 gi|9279629|dbj|BAB01087.1| ribonucleotide reductase [Arabidopsis thaliana]
 gi|17380726|gb|AAL36193.1| putative ribonucleotide reductase small subunit [Arabidopsis
           thaliana]
 gi|21436297|gb|AAM51287.1| putative ribonucleotide reductase small subunit [Arabidopsis
           thaliana]
          Length = 332

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K +         +++ ++++ +A  +E  +  + +P   VG+N
Sbjct: 201 RDEGLHCDFACLLYTLLKTKLS-------EERVKSIVCDAVEIEREFVCDALPCALVGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++F+A+R    +G   ++  T NPF WM E+I L+ + NFFE RV +YQ+ + 
Sbjct: 254 RDLMSQYIEFVADRLLGALGYGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 311

Query: 122 LK 123
           + 
Sbjct: 312 MS 313


>gi|322510501|gb|ADX05815.1| putative ribonucleotide reductase small subunit [Organic Lake
           phycodnavirus 1]
          Length = 324

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 74/116 (63%), Gaps = 9/116 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+LH  F + + ++++        K  ++K R ++ EA ++E  +  E++P   +G+N
Sbjct: 201 RDEALHTEFAVHLFHKLE-------KKINKKKIREIIEEAVVIEKEFIVESLPCRLIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           +    QY++++A+R   Q+G E +++ T NPF +M E+I L+++ NFFE+RV+EY 
Sbjct: 254 SDLMTQYIEYVADRLMIQLGCEEIYR-TNNPFDFM-ELISLEQKTNFFESRVSEYS 307


>gi|157939640|ref|YP_001497012.1| ribonucleotide reductase [Tanapox virus]
 gi|146746356|gb|ABQ43492.1| ribonucleotide reductase [Tanapox virus]
 gi|146746512|gb|ABQ43647.1| ribonucleotide reductase [Tanapox virus]
          Length = 325

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         I   HL         R ++ EA  +E  +  E +P   +G+N
Sbjct: 200 RDEGLHCDFAC-------IMFKHLLNPPLNSVVRDIIIEAVNIEKNFLTEAIPVKLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               +QY++F+A+R   ++G    +  ++NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 253 CDLMKQYIEFVADRLLLELGCNKYY-CSKNPFDFM-ENISLEGKTNFFEKRVSEYQK 307


>gi|325953830|ref|YP_004237490.1| ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
 gi|323436448|gb|ADX66912.1| Ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
          Length = 323

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 68/120 (56%), Gaps = 10/120 (8%)

Query: 2   RDESLHLNFG-IDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F  +  +N +K + P       ++  + ++ +A  +E  +  E +P   +G+
Sbjct: 196 RDEGLHCDFACLLYVNHLKNKLP-------EETVQKIIADAVEVEKEFVTEALPVRLIGM 248

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY++F+A+R    +G + ++  T NPF +M E+I L+ + NFFE RV EYQ+  
Sbjct: 249 NAELMCQYIEFVADRLLDALGCKKVWNAT-NPFDFM-ELISLQGKTNFFERRVGEYQKSG 306


>gi|212697417|ref|ZP_03305545.1| hypothetical protein ANHYDRO_01987 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325846383|ref|ZP_08169352.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|212675609|gb|EEB35216.1| hypothetical protein ANHYDRO_01987 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325481567|gb|EGC84607.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 352

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +IN +K E P L+T E ++   ++L E    EIA+    +     GLN
Sbjct: 224 RDENTHLWLFRSMINDLKEERPDLFTDELKEFYLSLLKEGVEQEIAWGKYAIGDEIQGLN 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
           +   E Y++++ N R   +GL  +++ Y E P    W+SE  D  + K +FFE +V+ Y 
Sbjct: 284 SQMIEDYIKYLGNLRAKGLGLGKIYEGYEEEPQSMKWVSEYSDPNQVKTDFFEGKVSAYS 343

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 344 KSSVIEDD 351


>gi|19881429|ref|NP_612246.1| putative ribonucleotide reductase small subunit [Infectious spleen
           and kidney necrosis virus]
 gi|19773634|gb|AAL98748.1|AF371960_24 putative ribonucleotide reductase small subunit [infectious spleen
           and kidney necrosis virus]
          Length = 312

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q+         K  Q  +  ++ +A  +E A+  E +    +G+N
Sbjct: 188 RDEGLHCDFACMLFRQMA-------NKPCQDDAHQIISDAVDIETAFFQEALKTPLLGMN 240

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           + S   Y+QF+A+R    +G   ++    NPF +M   I ++ + NFFE RV+EYQ+
Sbjct: 241 SDSMRLYIQFVADRLLDALGYAKMYN-VANPFDFMDN-ISIEGKTNFFERRVSEYQR 295


>gi|74229799|ref|YP_309003.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
 gi|72259713|gb|AAZ67484.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
          Length = 318

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 6/117 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F     N+   +   L     + K   M  EA  +E  +    +P   +G+N
Sbjct: 194 RDEGLHTDFACLYYNKYIAKEDKLS----ESKVLNMFKEAVDIEKDFFTNALPVAMLGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           A S  +Y++F+A+R   ++G E  FK T NPF +M+  I L+ + NFFE RV EY++
Sbjct: 250 AHSMCEYIEFVADRLLIELGYEKYFK-TLNPFEFMNN-ISLEGKTNFFEKRVGEYKR 304


>gi|94495782|ref|ZP_01302361.1| ribonucleotide reductase beta subunit [Sphingomonas sp. SKA58]
 gi|94424474|gb|EAT09496.1| ribonucleotide reductase beta subunit [Sphingomonas sp. SKA58]
          Length = 350

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDE+LH   GI  +    ++     T   +     M  +   +E A+       G V G
Sbjct: 189 VRDETLHCE-GIVRLFHAFVKERDCLTASVKDDIMDMCQKTVRIEDAFVDLVFEMGPVPG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRSTEYSKA 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|195027582|ref|XP_001986661.1| GH20400 [Drosophila grimshawi]
 gi|193902661|gb|EDW01528.1| GH20400 [Drosophila grimshawi]
          Length = 393

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVMMFQ-------HLVQRPSRERIIEIVSDAVTIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                +Y++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+
Sbjct: 321 CALMSEYIEFVADRLLVELGVGKIYN-TKNPFTFM-EMISLDGKTNFFEKKVGEYQR 375


>gi|190896568|gb|ACE96797.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896580|gb|ACE96803.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-AANPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|138894466|ref|YP_001124919.1| ribonucleoside-diphosphate reductase subunit beta [Geobacillus
           thermodenitrificans NG80-2]
 gi|196247935|ref|ZP_03146637.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. G11MC16]
 gi|134265979|gb|ABO66174.1| Ribonucleoside-diphosphate reductase beta subunit [Geobacillus
           thermodenitrificans NG80-2]
 gi|196212719|gb|EDY07476.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. G11MC16]
          Length = 344

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++    +  ++  E P   T E    +R+   +A  LEI +A E +     G++
Sbjct: 216 RDEHIHVDLFAKIFKEVLNEYPEYRTPELADFARSTFMKAAELEIEWAGEIIGNDIDGID 275

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118
               E Y++F AN R HQ+G + P   Y  NP  W+   E +DL K  +FFE +  +Y +
Sbjct: 276 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGK-SDFFEQKPRQYTK 334


>gi|148912897|ref|YP_001293211.1| hypothetical protein GTPV_gp017 [Goatpox virus Pellor]
          Length = 321

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K    +          + +++EA  +E  +    +P   +G+N
Sbjct: 196 RDEGLHCDFACLIFKHLKYPPSN-------DIIKIIINEAVSIEKEFLTNIIPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++FIA+R   ++G + +F  T NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 249 CDLMSQYIEFIADRLLLELGCDKVFMST-NPFDFM-ENISLEGKTNFFEKRVSEYQK 303


>gi|190896572|gb|ACE96799.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896574|gb|ACE96800.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896576|gb|ACE96801.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896578|gb|ACE96802.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|320536436|ref|ZP_08036471.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           phagedenis F0421]
 gi|320146705|gb|EFW38286.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           phagedenis F0421]
          Length = 363

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T E  +  R M+ E    EI + H  +     GLN
Sbjct: 235 RDENTHLWLFRSIIQELQKEEPQLFTPENIEMFRAMIKEGCEQEIKWGHYVIGDDIPGLN 294

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+Q++ N RC  +G EPL++ + E P    W+S+  +    K +FFE + T Y 
Sbjct: 295 KQMITDYIQYLGNLRCENLGFEPLYEGHREEPASMSWVSQYSNANLIKTDFFEAKSTAYA 354

Query: 118 QGAEL 122
           + + +
Sbjct: 355 KSSAM 359


>gi|190896570|gb|ACE96798.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896582|gb|ACE96804.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-AANPFDWM-ELISLQGKTNFFEKRVGEY 223


>gi|308806626|ref|XP_003080624.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
 gi|116059085|emb|CAL54792.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
          Length = 241

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   ++ Q+    P       ++  R ++ EA  +E  +  +++P   VG+N
Sbjct: 113 RDEGLHRDFAC-LLYQMLNNKPD------EEVVRKIVTEAVEIEKEFVCDSLPCALVGMN 165

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A     Y++++A+     +G+ P    T NPF WM E+I L+ + NFFE RV EYQ+  
Sbjct: 166 AGMMSDYIEYVADHLFTSLGM-PKEYNTANPFDWM-ELISLQGKTNFFEKRVGEYQKAG 222


>gi|312381384|gb|EFR27142.1| hypothetical protein AND_06323 [Anopheles darlingi]
          Length = 390

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++   ++ +A ++E  +  + +P   +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------YLVQKPSRKRVTDIIRDAVMIEQEFLTKALPVDMLGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G E ++  T+NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 318 CELMSQYIEFVADRLLVELGCEKVYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQK 372


>gi|255080138|ref|XP_002503649.1| predicted protein [Micromonas sp. RCC299]
 gi|226518916|gb|ACO64907.1| predicted protein [Micromonas sp. RCC299]
          Length = 324

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 13/120 (10%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
           RDE LH +F   + + +K  ++   L         + ++ +A  +E  +  + +    VG
Sbjct: 192 RDEGLHCDFACLLYSMLKHPLDPARL---------QEIVKDAVDIEKEFVCDALSCALVG 242

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +NA    +Y++F+A+R   Q+G+E ++  T NPF WM E+I L+ + NFFE RV +YQ+ 
Sbjct: 243 MNADLMSEYIEFVADRLMTQLGVEKVWN-TPNPFEWM-EMISLQGKANFFEHRVDQYQKA 300


>gi|156839886|ref|XP_001643629.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114248|gb|EDO15771.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 394

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 264 RDEGLHTDFASLLFS-------HLDNKPDPAIVEKIVTEAVEIEKRYFIDALPVALLGMN 316

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R     G E  +K  ENPF +M E I L  + NFFE RV++YQ+ +
Sbjct: 317 AKLMNQYVEFVADRLLVSFGNEKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAS 373


>gi|68161126|gb|AAY86994.1| ribonucleotide reductase M2b [Ictalurus punctatus]
          Length = 192

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 64/114 (56%), Gaps = 9/114 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH NF   + +Q++        K    + + ++ +A  +E  +  E +P   +G+N
Sbjct: 88  RDEGLHCNFACLIYSQLQ-------KKPSADRVKDIITKAVRIEQEFLTEALPVDLIGIN 140

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           +   +QY++F+A+R    +G+  +++  ENPF +M E I L+ + NFFE RV E
Sbjct: 141 SYLMKQYIEFVADRLLTDLGIPKVYE-AENPFDFM-EFISLEGKTNFFEKRVAE 192


>gi|313844096|ref|YP_004061759.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
 gi|312599481|gb|ADQ91503.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
          Length = 408

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 65/115 (56%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F +++   ++I       K   +   +++ EA  +E  +  + +P   +G+N
Sbjct: 287 RDEGLHQEFAVELFKLLRI-------KPTTETIHSIVKEAVEIEKGFILDALPCALIGMN 339

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
           +    +Y++++++R   QIG+ P++  ++NPF +M E I L  + NFFE RV +Y
Sbjct: 340 SEKMSEYIEYVSDRLLKQIGVPPIWN-SKNPFDFM-ENISLDGKTNFFEKRVGDY 392


>gi|294463759|gb|ADE77404.1| unknown [Picea sitchensis]
          Length = 289

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K       +K  +++ + ++ +A  +E  +  E +    VG+N
Sbjct: 160 RDEGLHCDFACLLYSLLK-------SKLSEERVKAIVRDAVDIEREFVCEALSCDLVGMN 212

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++FIA+R    +G   ++ + ENPF WM ++I L+ + NFFE RV +YQ+ +
Sbjct: 213 ATLMSQYIKFIADRLLVALGHGKMY-HVENPFDWM-DLISLQGKTNFFERRVGDYQKAS 269


>gi|85375147|ref|YP_459209.1| ribonucleotide-diphosphate reductase subunit beta [Erythrobacter
           litoralis HTCC2594]
 gi|84788230|gb|ABC64412.1| ribonucleotide reductase beta subunit [Erythrobacter litoralis
           HTCC2594]
          Length = 356

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 67/121 (55%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    + + ++  +     +TK  ++    +  ++  LE  +       G V G
Sbjct: 189 VRDESLHCEGIVRLFHEF-VRERDCYTKAVKEDIIDICQKSVRLEDNFIDLAFEMGPVSG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+GL+P++   ++P PW++ +++  +  NFFE R TEY +G
Sbjct: 248 MTPKEIKKYIRYIADWRLGQLGLQPIYMVDDHPLPWLAPLLNGVEHANFFEQRATEYSKG 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|56551339|ref|YP_162178.1| ribonucleotide-diphosphate reductase subunit beta [Zymomonas
           mobilis subsp. mobilis ZM4]
 gi|241760992|ref|ZP_04759081.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260753042|ref|YP_003225935.1| ribonucleotide-diphosphate reductase subunit beta [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
 gi|56542913|gb|AAV89067.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374611|gb|EER64072.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552405|gb|ACV75351.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 345

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH   GI  +     +     TK+ +     +      +E A+       G V G
Sbjct: 189 VRDESLHCE-GIIRLFHTFCQERQCLTKQVKDDILNICQRTVRIEDAFIDLVFEMGPVEG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+GL P++   E+P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MTPKEIKKYIRYIADWRLGQLGLSPIYMIEEHPLPWLTPLLNGVEHANFFETRSTEYSKA 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|62421216|gb|AAX82336.1| ribonucleotide reductase small chain [Orange-spotted grouper
           iridovirus]
          Length = 312

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q+         K  Q  +  ++ +A  +E A+  E +    +G+N
Sbjct: 188 RDEGLHCDFACMLFRQMA-------NKPCQDDAHEIISDAVDIETAFFREALKTPLLGMN 240

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           + S + Y+QF+A+R    +G   ++    NPF +M   I ++ + NFFE RV+EYQ+
Sbjct: 241 SDSMKLYIQFVADRLLDALGYAKMYN-VGNPFDFMDN-ISIEGKTNFFERRVSEYQR 295


>gi|170032272|ref|XP_001844006.1| ribonucleoside-diphosphate reductase small chain [Culex
           quinquefasciatus]
 gi|167872122|gb|EDS35505.1| ribonucleoside-diphosphate reductase small chain [Culex
           quinquefasciatus]
          Length = 391

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++   ++ EA ++E  +  + +P   +G+N
Sbjct: 266 RDEGLHTDFACLMFR-------YLVQKPSKERVLEIIREAVVIEQEFLTKALPVDLLGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G E ++  T+NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 319 CELMSQYIEFVADRLLLELGNEKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQK 373


>gi|50237508|gb|AAT71841.1| ribonucleotide reductase small chain [Rock bream iridovirus]
          Length = 312

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  Q+         K  Q  +  ++ +A  +E A+  E +    +G+N
Sbjct: 188 RDEGLHCDFACMLFRQMA-------NKPCQDDAHEIISDAVDIETAFFREALKTPLLGMN 240

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           + S + Y+QF+A+R    +G   ++    NPF +M   I ++ + NFFE RV+EYQ+
Sbjct: 241 SDSMKLYIQFVADRLLDALGYAKMYN-VGNPFDFMDN-ISIEGKTNFFERRVSEYQR 295


>gi|38683666|gb|AAR26843.1| FirrV-1-A19 [Feldmannia irregularis virus a]
          Length = 342

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH    + + N +K   P     +       +  +A  LE  +  E++P   +G+N
Sbjct: 217 RDEGLHAEGSVMIYNHLKHRLPVAVVHD-------IFTDAVALEKEFIRESLPVSLIGIN 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A +   Y++++++    ++G   LF  T+NPF WM+ +I ++ + NFFE RV EY +   
Sbjct: 270 ADTMSSYIEYVSDFWIQRLGYPKLFG-TKNPFEWMT-MIGMEGKSNFFEGRVAEYAKAGS 327

Query: 122 L 122
           +
Sbjct: 328 M 328


>gi|9633826|ref|NP_051904.1| gp015L [Rabbit fibroma virus]
 gi|6578545|gb|AAF17899.1|AF170722_17 gp015L [Rabbit fibroma virus]
          Length = 322

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     + ++  ++ EA ++E  +  + +P   +G+N
Sbjct: 198 RDEGLHCDFACLMFK-------HLNHTPSETRATDIIKEAVVIEQQFLTKALPVRLIGIN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G   +F  T NPF +M E I L+ + NFFE RV++YQ+
Sbjct: 251 CDLMCQYIEFVADRLVTELGYSKIFSAT-NPFDFM-ENISLEGKTNFFEKRVSDYQR 305


>gi|254586079|ref|XP_002498607.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
 gi|238941501|emb|CAR29674.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
          Length = 412

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  +        ++ EA  +E  Y  + +P   +G+N
Sbjct: 284 RDEGLHTDFACLLF-------AHLKNRPSPDIVERIITEAVSIEKRYFEDALPVALLGMN 336

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 337 AALMNQYVEFVADRLLVALGNEKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 393


>gi|308485547|ref|XP_003104972.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
 gi|308257293|gb|EFP01246.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
          Length = 323

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +I ++ P       ++    ++ EA  +E+ +  + +P   +G+N
Sbjct: 198 RDEGLHRDFACLLFTKI-VDKPS------REIVCEIVDEAVTIELEFLDQALPVNVIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++++A+    ++G E L+ +T NPF +M E I +  + NFFE RV+EYQ+  
Sbjct: 251 YTLMSQYIKYVADHLLEELGFEKLY-HTINPFDFM-ENISIDGKTNFFEKRVSEYQRSG 307


>gi|303272255|ref|XP_003055489.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463463|gb|EEH60741.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 322

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +K    H    E  Q+   ++ +A  +E  +  + +    VG+N
Sbjct: 192 RDEGLHCDFACLLYSMLK----HPLEPERLQE---IVKDAVEIEKEFVCDALSCALVGMN 244

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    +Y++F+A+R   Q+G++ ++  T NPF WM E I L+ + NFFE RV EYQ+  
Sbjct: 245 ADLMSEYIEFVADRLLVQLGVDKVWN-TPNPFDWM-ESISLQGKTNFFERRVGEYQRNG 301


>gi|10432587|dbj|BAB13815.1| ribonucleotide reductase small subunit [Lentinula edodes]
          Length = 418

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + + ++   PH  T E       ++ EA  +E  +  + +P   +G+N
Sbjct: 287 RDEGMHTDFACLLFSHLR-RRPHPDTVE------RIIKEAVAIEQEFLTDALPVSLIGMN 339

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G + L+  T NPF +M ++I L+ + NFFE RV++Y +  
Sbjct: 340 ATLMCQYIEFVADRLLVALGNKKLYNST-NPFDFM-DMISLQGKTNFFEKRVSDYSKAG 396


>gi|327403795|ref|YP_004344633.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
           16823]
 gi|327319303|gb|AEA43795.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
           16823]
          Length = 324

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      HL  +  +++ + ++ +A  +E  +  + +P   +G+N
Sbjct: 198 RDEGLHCDFACLLYTK------HLIHQLSKEQVQEIILDAVEIEKEFVTDALPVKLIGMN 251

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R   ++G   +F  T NPF +M ++I ++ + NFFE RV EYQ+  
Sbjct: 252 ADLMAQYIEFVADRLLTELGNPKVFN-TTNPFDFM-DMISIQGKTNFFEKRVAEYQKSG 308


>gi|187607401|ref|NP_001119973.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus (Silurana)
           tropicalis]
 gi|165971068|gb|AAI58191.1| LOC100144925 protein [Xenopus (Silurana) tropicalis]
          Length = 346

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       +L  K  +++   ++  A  +E  +  E +P   +G+N
Sbjct: 221 RDEGLHTDFACLMFH-------YLVKKPTEERVTEIIVNAVRIEQEFLTEALPVSLIGMN 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               + Y++F+A+R   ++G    FK  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 274 CTLMKTYIEFVADRLLVELGCSKAFK-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 330


>gi|302678465|ref|XP_003028915.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
 gi|300102604|gb|EFI94012.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
          Length = 331

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   +   ++   PH          R ++ EA  +E  +  + +P   +G+N
Sbjct: 202 RDEGMHTDFACLLFAHLR-RRPH------PDVVRRIIMEAVTIEQEFLTDALPVSLIGMN 254

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G E ++  T NPF +M ++I L+ + NFFE RV++Y+  A
Sbjct: 255 STLMCQYIEFVADRLLVALGNEKVYNVT-NPFDFM-DMISLQGKTNFFEKRVSDYKMAA 311


>gi|47213105|emb|CAF89525.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 198

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K   Q    ++  A  +E  +  E +P   +G+N
Sbjct: 73  RDEGLHCDFACLMFK-------HLLHKPSAQTVGAIIRNAVEIEQEFLTEALPVKLIGMN 125

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               ++Y++F+A+R   ++G   +++  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 126 CQLMKRYIEFVADRLLLELGFAKIYR-AENPFDFM-ENISLEGKTNFFEKRVGEYQR 180


>gi|195436539|ref|XP_002066225.1| GK22247 [Drosophila willistoni]
 gi|194162310|gb|EDW77211.1| GK22247 [Drosophila willistoni]
          Length = 395

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  +  +++   ++ +A  +E  +    +P   +G+N
Sbjct: 270 RDEGLHCDFAVLMFQ-------HLVQRPSRERIIEIIRDAVQIEQEFLTVALPVNLIGMN 322

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+
Sbjct: 323 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFSFM-EMISLDGKTNFFEKKVGEYQR 377


>gi|167760514|ref|ZP_02432641.1| hypothetical protein CLOSCI_02888 [Clostridium scindens ATCC 35704]
 gi|167661880|gb|EDS06010.1| hypothetical protein CLOSCI_02888 [Clostridium scindens ATCC 35704]
          Length = 347

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++K E P L+T+   ++ R M+ E    EI++ H  +     GLN
Sbjct: 219 RDENTHLWLFRNILLELKKEEPQLFTESRIEEYREMIKEGCQQEISWGHYVIGDDIQGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+Q++ N RC  +G  P+++ + + P    W+S+  +    K +FFE R T Y 
Sbjct: 279 RDMVTDYIQYLGNLRCTNLGFAPIYEGHVKEPDSMSWVSQFSNANMIKTDFFEARSTAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|154296564|ref|XP_001548712.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana
           B05.10]
 gi|150843273|gb|EDN18466.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana
           B05.10]
          Length = 407

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q  + ++ EA  +E  +  E +P   +G+N
Sbjct: 266 RDEGLHTDFACLLFS-------HLKHRPSKQAVQDVITEAVEIEQEFLTEALPCALLGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +   +QY++F+A+R    +G +  +K + NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 319 SNLMKQYIEFVADRLLLSLGNDKYYK-SANPFDFM-ENISLAGKTNFFEKRVGDYQKAG 375


>gi|323450429|gb|EGB06310.1| hypothetical protein AURANDRAFT_65685 [Aureococcus anophagefferens]
          Length = 349

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + ++++ + P        +    ++ +A  +E  +    +P   +G+N
Sbjct: 224 RDEGMHCDFACLLYSKLRNKLP-------VETINALIGDAVTIEKEFVVSALPVELIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           + +  QY++F A+R    +G   L++ T NPF WM E+I L+ + NFFE RV EY +  
Sbjct: 277 SRTMCQYIEFCADRLLLALGCPKLYEAT-NPFDWM-ELISLQGKTNFFEKRVGEYAKSG 333


>gi|256545921|ref|ZP_05473276.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           vaginalis ATCC 51170]
 gi|256398343|gb|EEU11965.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           vaginalis ATCC 51170]
          Length = 352

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +IN +K E P L+T E ++   ++L E    EIA+    +     GLN
Sbjct: 224 RDENTHLWLFRSMINDLKEERPDLFTDELKEFYLSLLKEGVEQEIAWGKYAIGDEIQGLN 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
           +   E Y++++ N R   +GL  +++ Y + P    W+SE  D  + K +FFE +V+ Y 
Sbjct: 284 SQMIEDYIKYLGNLRAKGLGLGTIYEGYEDEPQSMKWVSEYSDPNQVKTDFFEGKVSAYS 343

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 344 KSSVIEDD 351


>gi|308184827|ref|YP_003928960.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SJM180]
 gi|308060747|gb|ADO02643.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SJM180]
          Length = 341

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 64/120 (53%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E+++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEVSWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|283481249|emb|CAZ69365.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 99B1]
          Length = 325

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   H+  K   +    ++  A  LE  +  E +P   +G+N
Sbjct: 196 RDEGLHTDFAC------MLYRNHIIHKLPYETVLDIITNAVELERLFICEALPVSLIGIN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A S   Y++F+A+R    +G    +    NPF WM E+I L+ + NFFE RV EYQ+  
Sbjct: 250 AESMSTYIKFVADRLLISLGYAKHYNVV-NPFEWM-ELISLEGKTNFFEKRVGEYQKAG 306


>gi|255323570|ref|ZP_05364700.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           showae RM3277]
 gi|255299284|gb|EET78571.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           showae RM3277]
          Length = 340

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T E + K   M   A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRTERPDLFTPETEAKIYDMFERAGELEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY++++ ++R   IGL+  +    +P  W+ +      +K NFFE +VT Y +G+
Sbjct: 276 DDIIEQYIRYLIDQRLVAIGLKRRYN-VPHPIKWVDDFAKFNDQKSNFFEAKVTNYSKGS 334


>gi|197322443|ref|YP_002154716.1| putative ribonucleotide reductase small subunit [Feldmannia species
           virus]
 gi|197130510|gb|ACH46846.1| putative ribonucleotide reductase small subunit [Feldmannia species
           virus]
          Length = 342

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH    + + N +K   P     +       +  +AT +E  +  E +P   +G+N
Sbjct: 217 RDEGLHAEGSVMIYNHLKHRLPVAVVHD-------IFGQATTIEKEFIREALPVSLIGIN 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A +   Y+++I++    ++G   LF  ++NPF WM+ +I ++ + NFFE RV EY +   
Sbjct: 270 AGTMSTYIEYISDFWLEKLGYPKLFN-SKNPFEWMT-MIGMEGKSNFFEGRVAEYSKAGS 327

Query: 122 L 122
           +
Sbjct: 328 M 328


>gi|148554425|ref|YP_001262007.1| ribonucleotide-diphosphate reductase subunit beta [Sphingomonas
           wittichii RW1]
 gi|148499615|gb|ABQ67869.1| Ribonucleoside-diphosphate reductase [Sphingomonas wittichii RW1]
          Length = 350

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDE+LH   GI  +    ++     T   +     M  +   +E A+       G V G
Sbjct: 189 IRDETLHCE-GIVRLFHAFVKERDCLTASVKDDILDMCQKTVRIEDAFIDLVFEMGPVNG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+GL+P++   ++P PW++ +++  +  NFFETR TEY + 
Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIEDHPLPWLAPLLNGVEHANFFETRATEYSKA 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|310798394|gb|EFQ33287.1| ribonucleotide reductase [Glomerella graminicola M1.001]
          Length = 413

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q  + ++ +A  +E  +  E +P   +G+N
Sbjct: 275 RDEGLHTDFACLLYS-------HLKNRPSKQVIQDIIVDAVQIEQEFLTEALPCALLGMN 327

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +   +QY++F+A+R    +G + ++K + NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 328 SNLMKQYIEFVADRLLVALGNDKVYK-SSNPFDFM-ENISLGGKTNFFEKRVADYQKAG 384


>gi|73852496|ref|YP_293780.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 86]
 gi|72415212|emb|CAI65449.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 86]
          Length = 325

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   H+  K   +    ++  A  LE  +  E +P   +G+N
Sbjct: 196 RDEGLHTDFAC------MLYRNHIIHKLPYETVLDIITNAVELERLFICEALPVSLIGIN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A S   Y++F+A+R    +G    +    NPF WM E+I L+ + NFFE RV EYQ+  
Sbjct: 250 AESMSTYIKFVADRLLISLGYAKHYNVV-NPFEWM-ELISLEGKTNFFEKRVGEYQKAG 306


>gi|323452425|gb|EGB08299.1| hypothetical protein AURANDRAFT_59025 [Aureococcus anophagefferens]
          Length = 319

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + ++++        K    +  +++  A  +E ++    +P   +G+N
Sbjct: 194 RDEGLHCDFACLLYSKLR-------KKLSDVQVASIVGAAVDIEKSFVVSALPVELIGMN 246

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           + S  +Y++F A+R   ++G   L+  T NPF WM E+I L+ + NFFE RV EY + 
Sbjct: 247 SKSMCKYIEFCADRLLLELGYSTLYGAT-NPFDWM-ELISLQGKTNFFEKRVGEYAKA 302


>gi|213511642|ref|NP_001133495.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
 gi|209154228|gb|ACI33346.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
          Length = 387

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  ++    ++  A  +E  +  + +P   +G+N
Sbjct: 262 RDEGLHCDFACLMFK-------HLVHKPSKETVTKLIRNAVEIEQEFLTKALPVKLIGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G + +++  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 315 CDLMTQYIEFVADRLMLELGFDKIYR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 369


>gi|319655055|ref|ZP_08009124.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           2_A_57_CT2]
 gi|317393250|gb|EFV74019.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           2_A_57_CT2]
          Length = 345

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++  + +  +I  ENP L T E  +  +     A  LEI +A + +     G+ 
Sbjct: 217 RDEQIHVDLFVKIFKEILQENPELNTNELSKFVQETFKRAAELEIEWARDVIGSKTEGIL 276

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118
               E Y++F AN RC+Q+G E P   Y  NP  W+   E +D  K  +FFE +  +Y +
Sbjct: 277 LSDVEAYIKFYANIRCNQLGYERPFEGYRTNPLRWIVAYEQVDHGK-SDFFEQKSRQYTK 335


>gi|163781846|ref|ZP_02176846.1| ribonucleotide reductase beta chain [Hydrogenivirga sp. 128-5-R1-1]
 gi|159883066|gb|EDP76570.1| ribonucleotide reductase beta chain [Hydrogenivirga sp. 128-5-R1-1]
          Length = 350

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 2/125 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+    ++I  ++ E P L++ E ++        A   EI +         +G+N
Sbjct: 226 RDELTHVTLFRNMILNLQKEQPELFSPEIKKWIAEYFRYAIDQEIKWGQYVTQDQILGIN 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
               ++Y++++ N R  QIGLEPL+ + TENP  W+ +   +   K +FF+ +   Y + 
Sbjct: 286 NQLIDRYIKYLGNLRITQIGLEPLYPEITENPMKWIDDFRKINNTKTDFFQRKPQTYAKA 345

Query: 120 AELKW 124
            ELKW
Sbjct: 346 NELKW 350


>gi|283768723|ref|ZP_06341634.1| ribonucleoside-diphosphate reductase, beta subunit [Bulleidia
           extructa W1219]
 gi|283104509|gb|EFC05882.1| ribonucleoside-diphosphate reductase, beta subunit [Bulleidia
           extructa W1219]
          Length = 348

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ +++ E P L+T    Q  + M+HE    EIA+    +     GLN
Sbjct: 220 RDENTHLWLFRNILLELQKEEPELFTDSNIQMIKDMIHEGVQQEIAWGQYVIGNNIPGLN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
           +   E Y++++ N R   +GL  L++ Y E P    W+ +  D    K +FFE RVT Y 
Sbjct: 280 SQMVEDYIKYLGNTRFATLGLGNLYEGYEEEPETMRWVKQYSDANMVKTDFFEARVTAYA 339

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 340 KSSAIEDD 347


>gi|254293199|ref|YP_003059222.1| ribonucleotide-diphosphate reductase subunit beta [Hirschia baltica
           ATCC 49814]
 gi|254041730|gb|ACT58525.1| Ribonucleoside-diphosphate reductase [Hirschia baltica ATCC 49814]
          Length = 345

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    + + +    E   L TK  +            LE  +       G V G
Sbjct: 198 VRDESLHCEGMMKMFHTYAEETGAL-TKTVKDDITDCCQTVVKLEDKFIDLAFEAGEVEG 256

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     + Y+++IA+ R  Q+ L+P++   E+P PW++E+++  +  NFFE R TEY +G
Sbjct: 257 MTPEDIKNYIRYIADWRLKQLKLDPVYGVDEHPIPWLTEILNGVEHANFFEARATEYSKG 316

Query: 120 A 120
           A
Sbjct: 317 A 317


>gi|326437649|gb|EGD83219.1| ribonucleotide reductase M2 B [Salpingoeca sp. ATCC 50818]
          Length = 408

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +  + P       +++   ++ +A  +E  +  E +P   +G+N
Sbjct: 280 RDEGLHCDFACLMFSMLHKKPP-------KERVIGIIMDAVEIEQEFLTEALPVSLLGMN 332

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    +Y++F+++R    +G + ++  T NPFP+M E I ++ + NFFE RV+EYQ+  
Sbjct: 333 STLMREYIEFVSDRLLVSLGYDKVYNAT-NPFPFM-ENISIEGKTNFFERRVSEYQKSG 389


>gi|266623614|ref|ZP_06116549.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           hathewayi DSM 13479]
 gi|288864591|gb|EFC96889.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           hathewayi DSM 13479]
          Length = 346

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +     R M+ E    EIA+ H  +     GL 
Sbjct: 219 RDENTHLWLFRNMILELKNEEPELFTPDRVDVYREMIKEGCRQEIAWGHYAIGDKVPGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+Q++ N RC  +G EP+++  E       W+S+  +    K +FFE R T Y 
Sbjct: 279 KDMITDYIQYLGNLRCMSLGFEPIYEGHEKEPESMAWVSQYSNANMIKTDFFEARSTAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|190896518|gb|ACE96772.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++ Y  NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVY-YVANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|132628|sp|P20493|RIR2_VACCC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335366|gb|AAA48018.1| putative F4L [Vaccinia virus Copenhagen]
          Length = 319

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|284039889|ref|YP_003389819.1| ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
 gi|283819182|gb|ADB41020.1| Ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
          Length = 349

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 8/118 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   H+  K  + +   ++  A  +E  +  + +P   +G+N
Sbjct: 200 RDEGLHRDFAC------MLYTDHIVNKLPESQIYDIIRNAVEIEQEFVADALPVSLIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           A   +QY+ F+A+     +GL  ++    NPF +M ++I L+ + NFFE RV EYQ+G
Sbjct: 254 AELMKQYIAFVADHLLVTLGLRKMYN-VANPFDFM-DMISLQGKTNFFEKRVGEYQRG 309


>gi|44971395|gb|AAS49745.1| RPXV032 [Rabbitpox virus]
          Length = 319

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|313115920|ref|ZP_07801347.1| ribonucleoside-diphosphate reductase, beta subunit
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310621684|gb|EFQ05212.1| ribonucleoside-diphosphate reductase, beta subunit
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 347

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+T E  Q  R M+ E    EIA+ H  +     GLN
Sbjct: 219 RDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWGHYVIGDDIPGLN 278

Query: 62  APSCEQYMQFIANRRCHQIG---LEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N R   +G   L P F+       W+S+  D    K +FFE R T Y 
Sbjct: 279 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 338

Query: 118 QGAEL 122
           +   L
Sbjct: 339 KSTAL 343


>gi|190896526|gb|ACE96776.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++ Y  NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVY-YVANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|111184227|gb|ABH08147.1| HSPV044 [Horsepox virus]
          Length = 319

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|305665630|ref|YP_003861917.1| putative ribonucleoside-diphosphate reductase small chain
           [Maribacter sp. HTCC2170]
 gi|88710386|gb|EAR02618.1| probable ribonucleoside-diphosphate reductase small chain
           [Maribacter sp. HTCC2170]
          Length = 328

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 69/124 (55%), Gaps = 8/124 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H ++ +       +   H+  K  +++   ++ +A  +E  +  E++P   +G+N
Sbjct: 199 RDEGMHCDYAV------HLHKNHIVNKVTKERITDIIVDALNIEREFITESLPVSLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+ +R   ++  + ++  + NPF +M ++I L+ + NFFE RV+EYQ+   
Sbjct: 253 SKLMTQYLEFVTDRLLVELECDKVYN-SSNPFDFM-DMISLQGKTNFFEKRVSEYQKAGV 310

Query: 122 LKWD 125
           L  D
Sbjct: 311 LNKD 314


>gi|295103295|emb|CBL00839.1| Ribonucleotide reductase, beta subunit [Faecalibacterium
           prausnitzii SL3/3]
          Length = 347

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+T E  Q  R M+ E    EIA+ H  +     GLN
Sbjct: 219 RDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWGHYVIGDDIPGLN 278

Query: 62  APSCEQYMQFIANRRCHQIG---LEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N R   +G   L P F+       W+S+  D    K +FFE R T Y 
Sbjct: 279 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 338

Query: 118 QGAEL 122
           +   L
Sbjct: 339 KSTAL 343


>gi|160942848|ref|ZP_02090088.1| hypothetical protein FAEPRAM212_00325 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445900|gb|EDP22903.1| hypothetical protein FAEPRAM212_00325 [Faecalibacterium prausnitzii
           M21/2]
          Length = 347

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+T E  Q  R M+ E    EIA+ H  +     GLN
Sbjct: 219 RDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWGHYVIGDDIPGLN 278

Query: 62  APSCEQYMQFIANRRCHQIG---LEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N R   +G   L P F+       W+S+  D    K +FFE R T Y 
Sbjct: 279 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 338

Query: 118 QGAEL 122
           +   L
Sbjct: 339 KSTAL 343


>gi|22164633|ref|NP_671546.1| EVM028 [Ectromelia virus]
 gi|22123774|gb|AAM92332.1|AF523264_28 EVM028 [Ectromelia virus]
          Length = 319

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++FIA+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFIADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|330837704|ref|YP_004412345.1| ribonucleotide reductase [Spirochaeta coccoides DSM 17374]
 gi|329749607|gb|AEC02963.1| ribonucleotide reductase [Spirochaeta coccoides DSM 17374]
          Length = 360

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     ++ +++ E P ++T     + R M+ +    EIA+ H  +    VGLN
Sbjct: 232 RDETTHLWLFRSILREMQKEEPAMFTPNLVDEYRAMIKQGADQEIAWGHYVIGDDIVGLN 291

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+Q++ N RC  +G +P+++ + + P    W+ +  +    K +FFE R T Y 
Sbjct: 292 KDMVTDYIQYLGNLRCTDLGFQPIYEGHDKEPETMKWVGQYSNANLIKTDFFEARNTAYA 351

Query: 118 QGAEL 122
           +   L
Sbjct: 352 KSTSL 356


>gi|56419447|ref|YP_146765.1| ribonucleoside-diphosphate reductase subunit beta [Geobacillus
           kaustophilus HTA426]
 gi|56379289|dbj|BAD75197.1| ribonucleoside-diphosphate reductase beta subunit [Geobacillus
           kaustophilus HTA426]
          Length = 346

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++    +  ++  E P   T E     R    +A  LEI +A E +     G++
Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYRTPELADFVRNTFMKAAELEIEWAREIIGNDIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118
               E Y++F AN R HQ+G + P   Y  NP  W+   E +DL K  +FFE +  +Y +
Sbjct: 278 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGK-SDFFEQKPRQYTK 336


>gi|50545856|ref|XP_500466.1| YALI0B03630p [Yarrowia lipolytica]
 gi|49646332|emb|CAG82692.1| YALI0B03630p [Yarrowia lipolytica]
          Length = 403

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  +  + +P G +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLENRPSKKIVEDVIVEAVGIEQEFLTDALPCGLLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G   ++  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 325 AKLMCQYIEFVADRLLVALGNSKVYNST-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 381


>gi|262263187|dbj|BAI48096.1| ribonucleotide reductase M2 [Sus scrofa]
          Length = 355

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 9/116 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +Q+ + ++  A  +E  +  E +P   +G+N
Sbjct: 247 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 299

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV E +
Sbjct: 300 CTLMKQYIEFVADRLMLELGFGKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEIR 353


>gi|303278144|ref|XP_003058365.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459525|gb|EEH56820.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 338

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       +L  K      R ++ EA  +E  +  + +P   VG+N
Sbjct: 208 RDEGLHRDFACLLYS-------YLQNKPDVSIVRQIVCEAVEIEKEFVCDALPVSLVGMN 260

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                +Y++F+A+    Q+GLE  +  T NPF +M E+I L+ + NFFE RV EYQ+  
Sbjct: 261 KDLMSEYIEFVADHLLGQLGLEKEYN-TVNPFEFM-ELISLQGKTNFFEKRVGEYQKSG 317


>gi|32266105|ref|NP_860137.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           hepaticus ATCC 51449]
 gi|32262154|gb|AAP77203.1| ribonucleoside diphosphate reductase [Helicobacter hepaticus ATCC
           51449]
          Length = 349

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++I+ ++ E  HL+T   +++   M  +A  +E  +         +GL 
Sbjct: 225 RDEVTHLLLFQNMISSLRKEQGHLFTPSLEEEVVEMFKKAVEIESQWGEYITQGQILGLT 284

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +    +Y+Q++A+ R   +GL  L+  ++NP  W+ +      +K NFFE +VT Y +G+
Sbjct: 285 SEIIREYIQYLADARLKAVGLPQLYG-SKNPIKWVDQFASFNDQKTNFFEAKVTNYSKGS 343


>gi|291165654|gb|EFE27703.1| ribonucleoside-diphosphate reductase, beta subunit [Filifactor
           alocis ATCC 35896]
          Length = 348

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P L+T E  +  R M+ +    EI +A+  +     GL 
Sbjct: 220 RDENSHLWLFRSIILELKKEEPELFTPENIEVFRNMIRQGVEEEIKWANYVIGDHIKGLT 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N RC  +G EP+++ Y   P    W+SE  D    K +FFE +V+ Y 
Sbjct: 280 MQMVEDYLKYLGNLRCRGLGFEPIYEGYQREPESMSWVSEYSDPNAIKTDFFEGKVSAYA 339

Query: 118 QGAELKWD 125
           + + ++ D
Sbjct: 340 KSSVIEDD 347


>gi|149279601|ref|ZP_01885730.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
           sp. BAL39]
 gi|149229637|gb|EDM35027.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
           sp. BAL39]
          Length = 324

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F   + + +K        K  ++    ++ +A  +E  +  + +P   +G+N
Sbjct: 197 RDEGSHCEFACLLYSMLK-------NKLSEEHVHGIIRDAVEIEKEFVTDALPVALIGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R   ++G   ++  T NPF +M E+I L+ + NFFE RV +YQ+   
Sbjct: 250 AKLMSQYIEFVADRWLQELGYTKIYHAT-NPFDFM-EMISLQGKTNFFEKRVGDYQKSGV 307

Query: 122 L 122
           L
Sbjct: 308 L 308


>gi|149194868|ref|ZP_01871962.1| ribonucleotide-diphosphate [Caminibacter mediatlanticus TB-2]
 gi|149135027|gb|EDM23509.1| ribonucleotide-diphosphate [Caminibacter mediatlanticus TB-2]
          Length = 346

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 3/122 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H     ++  +IK E P L+T E  +  + ML+ A  LE  +         +GL+
Sbjct: 219 RDEVTHTLLFANIFKEIKKEFPDLFTPEVIRNIKDMLYAAYELERDWGFYITNDEILGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
               +++ +++AN+R H +GLE LF     +NP  W        ++K NFFE  V  Y +
Sbjct: 279 KELIDRFTKYLANKRAHAMGLELLFPEIGLKNPISWFDSFSSFNEQKTNFFEGNVVNYSK 338

Query: 119 GA 120
           G+
Sbjct: 339 GS 340


>gi|6969682|gb|AAF33894.1| TF4L [Vaccinia virus Tian Tan]
          Length = 319

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE L  +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLRCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               E Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQQ
Sbjct: 248 CEMMETYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQQ 302


>gi|167462363|ref|ZP_02327452.1| ribonucleoside-diphosphate reductase beta subunit [Paenibacillus
           larvae subsp. larvae BRL-230010]
          Length = 343

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 2/117 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H+     +  ++  ENP L  +E  +  R    +A  LEIA++   +   F G+ 
Sbjct: 215 RDEEIHVRLFTQIFRELIAENPELDNEETHEFVRQTFRKAAELEIAWSEYIIGDRFDGVT 274

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEY 116
           +   ++Y++F+AN+R +++G+E P   +  N   W+    +    K +FFE+RVT+Y
Sbjct: 275 SRDLDKYVRFMANKRVNELGIERPFEGHRRNNLRWIKAYEENDAGKTDFFESRVTQY 331


>gi|56404698|sp|O57175|RIR2_VACCA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2772676|gb|AAB96415.1| ribonucleotide reductase, small subunit [Vaccinia virus]
 gi|47088360|gb|AAT10430.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|160857924|emb|CAM58212.1| ribonucleotide reductase small subunit [Vaccinia virus Ankara]
          Length = 319

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|66275840|ref|YP_232925.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|132629|sp|P11158|RIR2_VACCV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335624|gb|AAA48244.1| F4L protein [Vaccinia virus]
 gi|335809|gb|AAA88680.1| ribonucleotide reductase (EC 1.17.4.1) small subunit [Vaccinia
           virus]
 gi|29692149|gb|AAO89322.1| ribonucleotide reductase small subunit [Vaccinia virus WR]
          Length = 319

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|56713400|gb|AAW23440.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
 gi|56713684|gb|AAW23722.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
 gi|88854075|gb|ABD52493.1| ribonucleoside-diphosphate reductase subunit [Vaccinia virus]
 gi|167412519|gb|ABZ79953.1| ribonucleotide reductase small subunit [Vaccinia virus GLV-1h68]
          Length = 319

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|20178418|ref|NP_619839.1| CPXV051 protein [Cowpox virus]
 gi|20153036|gb|AAM13497.1|AF482758_48 CPXV051 protein [Cowpox virus]
          Length = 333

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 209 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 262 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 316


>gi|13876672|gb|AAK43560.1| ribonucleoside reductase [lumpy skin disease virus]
          Length = 321

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K    +            +++EA  +E  +    +P   +G+N
Sbjct: 196 RDEGLHCDFACLIFKHLKYPPSN-------DIITIIINEAVSIEKEFLTNIIPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++FIA+R   ++G + +F  T NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 249 CVLMSQYIEFIADRLLLELGCDKVFMST-NPFDFM-ENISLEGKTNFFEKRVSEYQK 303


>gi|90660281|gb|ABD97395.1| ribonucleotide reductase small subunit [Cowpox virus]
          Length = 333

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 209 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 262 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 316


>gi|266919|sp|P29883|RIR2_VACCP RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335710|gb|AAA48294.1| F14 [Vaccinia virus]
          Length = 319

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|149185037|ref|ZP_01863354.1| ribonucleotide reductase beta subunit [Erythrobacter sp. SD-21]
 gi|148831148|gb|EDL49582.1| ribonucleotide reductase beta subunit [Erythrobacter sp. SD-21]
          Length = 352

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + ++   E   L TK  ++    +  +   LE  +       G V G
Sbjct: 189 IRDESLHCEGIIRMFHEFVRERDCL-TKAVKEDIIDICQKTVRLEDNFIDLAFEMGPVSG 247

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     ++Y+++IA+ R  Q+ L+P++   ++P PW++ +I+  +  NFFE R TEY +G
Sbjct: 248 MTPKDIKKYIRYIADWRLGQLNLDPIYMVDDHPLPWLAPLINGVEHANFFEQRATEYSKG 307

Query: 120 A 120
           A
Sbjct: 308 A 308


>gi|22595713|gb|AAN02745.1| ribonucleotide reductase small subunit [lumpy skin disease virus]
          Length = 321

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K    +            +++EA  +E  +    +P   +G+N
Sbjct: 196 RDEGLHCDFACLIFKHLKYPPSN-------DIITIIINEAVSIEKEFLTNIIPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++FIA+R   ++G + +F  T NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 249 CVLMSQYIEFIADRLLLELGCDKVFMST-NPFDFM-ENISLEGKTNFFEKRVSEYQK 303


>gi|157164305|ref|YP_001467763.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           concisus 13826]
 gi|112800348|gb|EAT97692.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           concisus 13826]
          Length = 340

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+T E + K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFTPETEAKIYDMFEKAGNLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               EQY+ ++ ++R   IGL+  +    +P  W+ +      +K NFFE +VT Y +G+
Sbjct: 276 DDIIEQYIHYLIDQRLVAIGLKRKYN-VAHPIKWVDDFAKFNDQKSNFFEAKVTNYSKGS 334


>gi|46446983|ref|YP_008348.1| ribonucleoside-diphosphate reductase small chain [Candidatus
           Protochlamydia amoebophila UWE25]
 gi|46400624|emb|CAF24073.1| probable ribonucleoside-diphosphate reductase small chain
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 323

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +Q+  + P        +  + ++  A  +E  +  + +P   +G+N
Sbjct: 198 RDEGLHCDFACLLYSQLNNKLP-------LETLQAIISHAVAIEKEFVQDALPVRLIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G   L+   +NPF +M ++I +  + NFFE RV+EYQ+  
Sbjct: 251 ATLMCQYIEFVADRLLVALGSPKLYN-VDNPFDFM-DLISMPGKTNFFERRVSEYQKSG 307


>gi|109947017|ref|YP_664245.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           acinonychis str. Sheeba]
 gi|109714238|emb|CAJ99246.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           acinonychis str. Sheeba]
          Length = 341

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLIDEVIEMFKKAVKIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKIYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|313768143|ref|YP_004061574.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
 gi|312599750|gb|ADQ91771.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
          Length = 387

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H  F +++ N +K        K  Q     ++ +A  +E  +  + +P   +G+N
Sbjct: 266 RDEGMHQEFAVELFNMLK-------NKPSQNTIEEIIRDAVSIEKEFITDALPCSLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    +Y++++A+R   Q+G   ++  T+NPF +M E I L  + NFFE RV +Y +  E
Sbjct: 319 SGKMSEYIEYVADRLSKQVGHNKIWN-TKNPFDFM-ENISLDGKTNFFEKRVGDYGKMDE 376


>gi|311748425|ref|ZP_07722210.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
           sp. PR1]
 gi|126576938|gb|EAZ81186.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
           sp. PR1]
          Length = 326

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 18/127 (14%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLLEIAYAHETMPKG 56
           RDE LH +F             HL+TK       ++  R ++ +A  +E  +  + +P  
Sbjct: 196 RDEGLHCDFAC-----------HLYTKHVVNPLPKETVREIIIDAVKIEKEFVTDALPVR 244

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
            +G+N+    QY++F+A+R   ++  E ++  T NPF +M ++I L+ + NFFE RV +Y
Sbjct: 245 LIGMNSDLMCQYIEFVADRLLLELDCEKVWNST-NPFDFM-DMISLQGKTNFFEKRVGDY 302

Query: 117 QQGAELK 123
           Q+   +K
Sbjct: 303 QKAGVMK 309


>gi|15150459|ref|NP_150454.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
           virus NI-2490]
 gi|15149031|gb|AAK84981.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
           virus NI-2490]
 gi|22595554|gb|AAN02587.1| ribonucleotide reductase small subunit [Lumpy skin disease virus
           NW-LW]
          Length = 321

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K    +       +    +++EA  +E  +    +P   +G+N
Sbjct: 196 RDEGLHCDFACLIFKHLKYPPSN-------EIITIIINEAVSIEKEFLTNIIPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++FIA+R   ++G + +F  T NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 249 CDLMSQYIEFIADRLLLELGCDKVFMST-NPFDFM-ENISLEGKTNFFEKRVSEYQK 303


>gi|438946|gb|AAA60776.1| homolog of vaccinia virus CDS F4L (ribonucleotide reductase, small
           chain); putative [Variola major virus]
 gi|94484491|gb|ABF23604.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484688|gb|ABF23800.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484886|gb|ABF23997.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724274|gb|ABG43399.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 333

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 209 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 262 CEMMKTYIKFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 316


>gi|885759|gb|AAA69374.1| E4L [Variola virus]
 gi|5830589|emb|CAB54628.1| E4L protein [Variola minor virus]
 gi|94483674|gb|ABF22791.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484287|gb|ABF23401.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485692|gb|ABF24799.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486095|gb|ABF25200.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486298|gb|ABF25402.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486501|gb|ABF25604.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486703|gb|ABF25805.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486906|gb|ABF26007.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487312|gb|ABF26411.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487921|gb|ABF27017.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489931|gb|ABF29017.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724476|gb|ABG43600.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635085|gb|ABU91534.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 319

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|312075738|ref|XP_003140550.1| ribonucleotide reductase M2 B [Loa loa]
 gi|307764288|gb|EFO23522.1| ribonucleotide reductase M2 B [Loa loa]
          Length = 350

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   IK        K  +++   ++ EA  +E  Y  E +P   +G+N
Sbjct: 225 RDEGLHRDFACLLYTYIK-------NKPSEERIYQIIREAVDIEKEYLTEALPVDLIGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++++A+    ++    ++ Y++NPF +M E I ++ + NFFE RV+EYQ+   
Sbjct: 278 CKLMCQYIEYVADHLLTELHCAKMY-YSDNPFDFM-ERISIEAKTNFFEKRVSEYQKAGV 335

Query: 122 L 122
           L
Sbjct: 336 L 336


>gi|304439119|ref|ZP_07399038.1| ribonucleotide-diphosphate reductase beta subunit [Peptoniphilus
           duerdenii ATCC BAA-1640]
 gi|304372478|gb|EFM26065.1| ribonucleotide-diphosphate reductase beta subunit [Peptoniphilus
           duerdenii ATCC BAA-1640]
          Length = 347

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I  +K E P L+T+E  ++ R +L      EIA+    +     GL 
Sbjct: 219 RDENTHLWLFRSIILDLKKEQPELFTEEKVEEYRALLKYGVEEEIAWGKYVIGDDIQGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
           +   E Y++++ N R   +G EPL++  +       W+++  D+   K +FFE +VT Y 
Sbjct: 279 SKMVEDYIKYLGNLRATNLGFEPLYEGYDKEVESMKWVTQYADINLLKTDFFEAKVTAYS 338

Query: 118 QGAELKWD 125
           + A ++ D
Sbjct: 339 KSAIIEDD 346


>gi|113195221|ref|YP_717351.1| ribonucleotide reductase small subunit [Taterapox virus]
 gi|90660497|gb|ABD97610.1| ribonucleotide reductase small subunit [Taterapox virus]
          Length = 319

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|156387375|ref|XP_001634179.1| predicted protein [Nematostella vectensis]
 gi|156221259|gb|EDO42116.1| predicted protein [Nematostella vectensis]
          Length = 384

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   +L  K  ++  R ++ +A ++E  +    +P   +G+N
Sbjct: 259 RDEGLHCDFAC-------LMYKYLVNKPDEETVRGIIKDAVVIEQEFLTSALPVKLIGMN 311

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +  + ++   ENPF +M E I L+ + NFFE RV EYQ+  
Sbjct: 312 CALMRQYIEFVADRLLVALNCQKVYN-AENPFDFM-ENISLEGKTNFFEKRVGEYQKSG 368


>gi|885717|gb|AAA69333.1| C8L [Variola virus]
 gi|885826|gb|AAA69439.1| C8L [Variola virus]
 gi|94483878|gb|ABF22994.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484081|gb|ABF23196.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485084|gb|ABF24194.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485286|gb|ABF24395.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485489|gb|ABF24597.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485894|gb|ABF25000.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487109|gb|ABF26209.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487515|gb|ABF26613.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487716|gb|ABF26813.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488123|gb|ABF27218.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488323|gb|ABF27417.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488523|gb|ABF27616.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488724|gb|ABF27816.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488925|gb|ABF28016.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489125|gb|ABF28215.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489324|gb|ABF28413.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489527|gb|ABF28615.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489726|gb|ABF28813.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94490135|gb|ABF29220.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724070|gb|ABG43196.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724681|gb|ABG43804.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724885|gb|ABG44007.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725088|gb|ABG44209.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725293|gb|ABG44413.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725496|gb|ABG44615.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725700|gb|ABG44818.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725903|gb|ABG45020.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726107|gb|ABG45223.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726310|gb|ABG45425.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726513|gb|ABG45627.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635013|gb|ABU91466.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635031|gb|ABU91483.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635049|gb|ABU91500.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635067|gb|ABU91517.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635103|gb|ABU91551.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635121|gb|ABU91568.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635139|gb|ABU91585.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635158|gb|ABU91603.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635176|gb|ABU91620.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635194|gb|ABU91637.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635212|gb|ABU91654.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635230|gb|ABU91671.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635248|gb|ABU91688.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635266|gb|ABU91705.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635284|gb|ABU91722.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635320|gb|ABU91756.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635338|gb|ABU91773.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635356|gb|ABU91790.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635374|gb|ABU91807.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635392|gb|ABU91824.1| ribonucleotide reductase small subunit [Variola virus]
 gi|157739431|gb|ABU91739.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 319

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIKFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|169860861|ref|XP_001837065.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
 gi|116501787|gb|EAU84682.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
          Length = 414

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + + +K   PH          + ++ EA  +E  +  + +P   +G+N
Sbjct: 278 RDEGMHTDFACLLFSHLK-RRPH------PDVVKRIITEAVAIEQEFLTDALPVKLIGMN 330

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E ++  T NPF +M ++I L+ + NFFE RV++Y +  
Sbjct: 331 AELMCQYIEFVADRLLVSLGNEKVYNST-NPFDFM-DMISLQGKTNFFEKRVSDYAKAG 387


>gi|154174558|ref|YP_001409201.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           curvus 525.92]
 gi|112803525|gb|EAU00869.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           curvus 525.92]
          Length = 340

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T E ++K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRAERSDLFTPEMEEKIYDMFEKAGNLEIKWGRYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   IGL+  +   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLVAIGLKRKYN-AKHPIKWVDDFAKFNDQKSNFFESKVTNYSKGS 334


>gi|294501621|ref|YP_003565321.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           megaterium QM B1551]
 gi|295706969|ref|YP_003600044.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           megaterium DSM 319]
 gi|294351558|gb|ADE71887.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           megaterium QM B1551]
 gi|294804628|gb|ADF41694.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           megaterium DSM 319]
          Length = 347

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH+     +  ++  ENP   T+E +        EA  LEI +A   + + F G+ 
Sbjct: 217 RDEQLHVGLFEKIFKEVLNENPAYRTEELETFVVETFQEAARLEIEWAESVIGEKFDGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGL-------EPLFKYTENPFPWM--SEVIDLKKEKNFFETR 112
               +QY++++AN+RC+Q+G         P+    ENP  W+   + +DL K  +FFE +
Sbjct: 277 MKELQQYIEYMANKRCNQLGFGRAAFPEAPI----ENPLRWIIAYQEVDLGK-TDFFEQK 331

Query: 113 VTEYQQGAE 121
             +Y + ++
Sbjct: 332 SRQYTKASD 340


>gi|131840053|ref|YP_001096062.1| ORF23 [Cyprinid herpesvirus 3]
 gi|84181618|gb|ABC55221.1| hypothetical protein [Cyprinid herpesvirus 3]
 gi|109706628|gb|ABG42854.1| ORF23 [Cyprinid herpesvirus 3]
 gi|129560539|dbj|BAF48834.1| ribonucleotide reductase small chain [Cyprinid herpesvirus 3]
          Length = 335

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 8/116 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  K  +++ R ++ EA  +E  +  +++P   VG+N
Sbjct: 208 RDEGLHRDFACLLFSS------HLRHKPSKERVRAIITEAVEIEKEFLTQSLPVSLVGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                +Y+Q++A+    Q+GL  L+  T  PF +M E I L+ + NFFE RV +YQ
Sbjct: 262 HDLMCKYIQYVADHLLCQMGLSRLYN-TPCPFDFM-ENISLEGKTNFFEKRVADYQ 315


>gi|317014473|gb|ADU81909.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Gambia94/24]
          Length = 341

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKIYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|302696699|ref|XP_003038028.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
 gi|300111725|gb|EFJ03126.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
          Length = 377

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H  F   + + ++   PH          + ++ EA  +E  +  + +P   +G+N
Sbjct: 257 RDEGMHTEFACLLFSHLR-HRPH------PSVVQRIVKEAVAIEHEFLSDALPVSLIGMN 309

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           A    QY++F+A+R  + +G   ++  T NPF +M ++I L+ + NFFE RV+EY + 
Sbjct: 310 AALMRQYIEFVADRLLYSLGQNKIYNAT-NPFDFM-DMISLQGKTNFFEKRVSEYAKA 365


>gi|317011285|gb|ADU85032.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SouthAfrica7]
          Length = 341

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLIDEVIEMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKIYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|298707394|emb|CBJ30029.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 380

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 17/123 (13%)

Query: 2   RDESLHLNFGI----DVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57
           RDE LH +F       ++N++ +E           +   ++ +A  +E  +    +P   
Sbjct: 255 RDEGLHTDFACLLFRKLVNKLPVE-----------RVAEIICDAVDIEKEFITSALPVEL 303

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           +G+N+    QY++F A+R   ++G E  +  T NPF WM E+I L+ + NFFE RV EY 
Sbjct: 304 IGMNSALMRQYIEFCADRLLMELGCEKKYNST-NPFDWM-EMISLQGKTNFFEKRVGEYS 361

Query: 118 QGA 120
           +  
Sbjct: 362 KSG 364


>gi|58260896|ref|XP_567858.1| ribonucleoside-diphosphate reductase [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134116993|ref|XP_772723.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255341|gb|EAL18076.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229939|gb|AAW46341.1| ribonucleoside-diphosphate reductase, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 401

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   ++   PH            ++ EA  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHTDFACLLFTHLR-RRPH------PDTIARIIKEAVTIEQEFLTDALPVSLIGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E ++  T NPF +M E+I L+ + NFFE+RV+ Y +  
Sbjct: 322 AKLMCQYIEFVADRLLVAMGNEKIWNST-NPFDFM-EMISLQGKANFFESRVSAYSKSG 378


>gi|188527870|ref|YP_001910557.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Shi470]
 gi|188144110|gb|ACD48527.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Shi470]
 gi|308063873|gb|ADO05760.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Sat464]
          Length = 341

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|8101697|gb|AAF72618.1|AF252539_2 ribonucleotide reductase small subunit M2 [Leishmania amazonensis]
          Length = 345

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 218 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFFE RV EYQ+  
Sbjct: 272 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKRVGEYQKAG 328


>gi|257453171|ref|ZP_05618470.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
           3_1_5R]
 gi|317059706|ref|ZP_07924191.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 3_1_5R]
 gi|313685382|gb|EFS22217.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 3_1_5R]
          Length = 344

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +IK ENP+ + +E   + R M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFQKIIREIKAENPNFFQEE---EIRMMFQTAVEQEILWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
             + E Y +++AN R   IGL P++  +T+NP+  +    D + +     NFFE  VT Y
Sbjct: 273 TETTEAYTKWLANERLRTIGLAPMYDGFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSY 332

Query: 117 QQGAELK-WD 125
              + +  WD
Sbjct: 333 NMSSSIDGWD 342


>gi|73544537|ref|XP_848163.1| ribonucleoside-diphosphate reductase small chain [Leishmania major
           strain Friedlin]
 gi|321438516|emb|CBZ12275.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania major strain Friedlin]
          Length = 388

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFFE RV EYQ+  
Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKRVGEYQKAG 371


>gi|317178607|dbj|BAJ56395.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F30]
          Length = 341

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|308183194|ref|YP_003927321.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori PeCan4]
 gi|308065379|gb|ADO07271.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori PeCan4]
          Length = 341

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|261838422|gb|ACX98188.1| ribonucleoside-diphosphate reductase 1 beta subunit [Helicobacter
           pylori 51]
          Length = 341

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|156387377|ref|XP_001634180.1| predicted protein [Nematostella vectensis]
 gi|156221260|gb|EDO42117.1| predicted protein [Nematostella vectensis]
          Length = 341

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   +L  K  ++  R ++ +A ++E  +    +P   +G+N
Sbjct: 216 RDEGLHCDFAC-------LMYKYLVNKPDEETVRGIIKDAVVIEQEFLTSALPVKLIGMN 268

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +  + ++   ENPF +M E I L+ + NFFE RV EYQ+  
Sbjct: 269 CALMRQYIEFVADRLLVALNCQKVYN-VENPFDFM-ENISLEGKTNFFEKRVGEYQKSG 325


>gi|3914644|sp|O46310|RIR2_LEIAM RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase M2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2828563|gb|AAC08302.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
          Length = 345

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 218 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 271

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFFE RV EYQ+  
Sbjct: 272 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKRVGEYQKAG 328


>gi|321263777|ref|XP_003196606.1| ribonucleoside-diphosphate reductase [Cryptococcus gattii WM276]
 gi|317463083|gb|ADV24819.1| Ribonucleoside-diphosphate reductase, putative [Cryptococcus gattii
           WM276]
          Length = 401

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   ++   PH            ++ EA  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHTDFACLLFTHLR-RRPH------PDTIARIIKEAVSIEQEFLTDALPVSLIGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E ++  T NPF +M E+I L+ + NFFE+RV+ Y +  
Sbjct: 322 AKLMCQYIEFVADRLLVALGNEKIWNST-NPFDFM-EMISLQGKANFFESRVSAYSKSG 378


>gi|297380266|gb|ADI35153.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori v225d]
 gi|308062365|gb|ADO04253.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Cuz20]
 gi|317180823|dbj|BAJ58609.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F32]
          Length = 341

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|257467364|ref|ZP_05631675.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315918494|ref|ZP_07914734.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313692369|gb|EFS29204.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 344

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +IK ENP+ + +E   + R M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFQKIIREIKAENPNFFQEE---EIRMMFQTAVEQEILWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
             + E Y +++AN R   IGL P++  +T+NP+  +    D + +     NFFE  VT Y
Sbjct: 273 TETTEAYTKWLANERLRTIGLAPMYDGFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSY 332

Query: 117 QQGAELK-WD 125
              + +  WD
Sbjct: 333 NMSSSIDGWD 342


>gi|210135249|ref|YP_002301688.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori P12]
 gi|210133217|gb|ACJ08208.1| ribonucleoside-diphosphate reductase 1 beta subunit [Helicobacter
           pylori P12]
          Length = 341

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|109287926|ref|YP_654620.1| hypothetical protein MIV048L [Invertebrate iridescent virus 3]
 gi|123878658|sp|Q197B2|RIR2_IIV3 RecName: Full=Probable ribonucleoside-diphosphate reductase small
           subunit 048L; AltName: Full=Ribonucleotide reductase
           small subunit
 gi|106073549|gb|ABF82078.1| hypothetical protein MIV048L [Aedes taeniorhynchus iridescent
           virus]
          Length = 376

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 2/122 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIEN-PHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FV 58
           + DE+ H N  +++ + + +EN  H+     + + R    +   LE  +       G   
Sbjct: 248 IADETHHTNSMMELFSTLVVENKSHIRLGVLEARVRDTARKIVQLEDGFIDLAFSMGEMR 307

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
            L A   + Y+++I NRR   +G  PL+   ENP PW+ ++++     NFFE + TEY +
Sbjct: 308 QLTADDVKSYIRYITNRRLQTMGYLPLYSVVENPLPWVEDLLNAPSHTNFFENKPTEYAK 367

Query: 119 GA 120
            +
Sbjct: 368 AS 369


>gi|269963257|ref|ZP_06177590.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
 gi|269832005|gb|EEZ86131.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
          Length = 310

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 16/129 (12%)

Query: 2   RDESLHLNFG---IDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           RDE LH +F       + Q K+          QQ+   +  EA  +E  +  E +P   +
Sbjct: 190 RDEGLHFSFSALLFKTLGQGKVT---------QQEFEEICREAVSIEKEFVTEALPVDLI 240

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ- 117
           G+NA    QY++  A+      G  P+F   ENPF +M  ++D++ + NFFE RVTEY+ 
Sbjct: 241 GMNAELMCQYIEHTADVIAGLFGFTPIFG-AENPFDYM-RLLDMEGKTNFFEKRVTEYKR 298

Query: 118 -QGAELKWD 125
            Q  +L +D
Sbjct: 299 PQDRQLSFD 307


>gi|194755279|ref|XP_001959919.1| GF11796 [Drosophila ananassae]
 gi|190621217|gb|EDV36741.1| GF11796 [Drosophila ananassae]
          Length = 393

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F + +         HL  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQKPRRERIIEIIRDAVDIEQEFLTDALPVNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFFE +V EYQ+
Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVGEYQR 375


>gi|326797773|ref|YP_004315592.1| ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
 gi|326548537|gb|ADZ76922.1| Ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
          Length = 323

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 67/119 (56%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F   + + ++ + P       +++ + ++ +A  +E  +  + +P   +G+N
Sbjct: 198 RDEGLHCEFACLLYSMLEAKLP-------KERVQEIIIDAVEIEKEFITDALPVKLIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A   +QY++F+A+R   ++G    +  T NPF +M E+I L+ + NFFE RV +YQ+  
Sbjct: 251 ADLMKQYIEFVADRWLVELGNSKYYNAT-NPFDFM-ELISLQGKTNFFEKRVGDYQKSG 307


>gi|297530897|ref|YP_003672172.1| ribonucleotide reductase [Geobacillus sp. C56-T3]
 gi|297254149|gb|ADI27595.1| ribonucleotide reductase [Geobacillus sp. C56-T3]
          Length = 346

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++    +  ++  E P   T E     R    +A  LEI +A E +     G++
Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYRTPELSDFVRETFTKAAELEIEWAGEIIGNDIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118
               E Y++F AN R HQ+G + P   Y  NP  W+   E +DL K  +FFE +  +Y +
Sbjct: 278 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGK-SDFFEQKPRQYTK 336


>gi|323453718|gb|EGB09589.1| hypothetical protein AURANDRAFT_60022 [Aureococcus anophagefferens]
          Length = 393

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 7/118 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +++     HL   +   ++  ++ EA   E+ +  + +P   VG+N
Sbjct: 265 RDEGLHCDFACALYSRLP---GHLRLSD--AEATAIISEAVDTEVDFVTDALPVSLVGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           A     Y++F+A+R    +G  P      NPF +M E+I ++ + NFFE RV EYQ+ 
Sbjct: 320 AKLMTDYVKFVADRLLASLG-HPKIYGAANPFDFM-ELISMQGKTNFFEKRVAEYQKA 375


>gi|261419130|ref|YP_003252812.1| ribonucleoside-diphosphate reductase [Geobacillus sp. Y412MC61]
 gi|319765947|ref|YP_004131448.1| ribonucleotide reductase [Geobacillus sp. Y412MC52]
 gi|261375587|gb|ACX78330.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. Y412MC61]
 gi|317110813|gb|ADU93305.1| ribonucleotide reductase [Geobacillus sp. Y412MC52]
          Length = 346

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++    +  ++  E P   T E     R    +A  LEI +A E +     G++
Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYRTPELSDFVRETFTKAAELEIEWAGEIIGNDIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118
               E Y++F AN R HQ+G + P   Y  NP  W+   E +DL K  +FFE +  +Y +
Sbjct: 278 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGK-SDFFEQKPRQYTK 336


>gi|155370982|ref|YP_001426516.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
           virus 1]
 gi|155124302|gb|ABT16169.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
           virus 1]
          Length = 325

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  FG  + +  K+EN     K      ++++ EA   E  +  + +P   +G+N
Sbjct: 201 RDEGLHQQFGELLYS--KLEN-----KLSLDVVKSIVEEAVANEKDFICDAIPCRMIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G    F   ENPF +M E+I L+ + NFFE RV+EYQ+   
Sbjct: 254 SDLMSQYIEFVADRIFTALGYPKQFG-AENPFDFM-ELISLEGKSNFFERRVSEYQKAGV 311

Query: 122 LKWD 125
           +  D
Sbjct: 312 MNAD 315


>gi|255711354|ref|XP_002551960.1| KLTH0B03938p [Lachancea thermotolerans]
 gi|238933338|emb|CAR21522.1| KLTH0B03938p [Lachancea thermotolerans]
          Length = 403

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 273 RDEGLHTDFACLLF-------AHLKNKPDPAIIERIITEAVEIEQRYFRDALPVSLLGMN 325

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G +  +  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 326 ADLMNQYVEFVADRLLVALGNQKFYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 382


>gi|84998662|ref|XP_954052.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
           reductase small chain [Theileria annulata]
 gi|65305050|emb|CAI73375.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
           reductase small chain, putative [Theileria annulata]
          Length = 322

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 56/95 (58%), Gaps = 8/95 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +FG  + + +K + P       ++  + ++ EA ++E +Y  +++P   +G+N
Sbjct: 224 RDEGLHADFGCFIYHNLKHKLP-------EEAVQQIIKEAVVVERSYICDSLPCDLIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
           +    QY++F+A+R    +G+ P++  T NPF WM
Sbjct: 277 SQLMTQYIEFVADRLLQSLGVRPVYNVT-NPFDWM 310


>gi|124010268|ref|ZP_01694921.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
           marina ATCC 23134]
 gi|123983653|gb|EAY24093.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
           marina ATCC 23134]
          Length = 330

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N ++  K   +   +++  A  +E  +  + +P   +G+N
Sbjct: 200 RDEGLHCDFAC------LLYNSYIKNKLPNETVVSIIKNAVEIEKEFVTDALPVKLIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    +Y++F+A+R   ++G E  +  T NPF +M E+I L+ + NFFE RV+EY +  
Sbjct: 254 SDLMSEYIEFVADRLLVELGCEKQYN-TANPFDFM-EMISLEGKTNFFEKRVSEYSKAG 310


>gi|323308423|gb|EGA61668.1| Rnr2p [Saccharomyces cerevisiae FostersO]
          Length = 399

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+  
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380


>gi|254779643|ref|YP_003057749.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori B38]
 gi|254001555|emb|CAX29573.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Helicobacter pylori B38]
          Length = 341

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|207343947|gb|EDZ71248.1| YJL026Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 399

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+  
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380


>gi|15612081|ref|NP_223733.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori J99]
 gi|11387046|sp|Q9ZKC3|RIR2_HELPJ RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|4155613|gb|AAD06604.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 BETA CHAIN [Helicobacter
           pylori J99]
 gi|307637755|gb|ADN80205.1| Ribonucleotide reductase of classIa beta subunit [Helicobacter
           pylori 908]
 gi|325996356|gb|ADZ51761.1| Ribonucleotide reductase of class Ia beta subunit [Helicobacter
           pylori 2018]
 gi|325997944|gb|ADZ50152.1| Ribonucleosidase diphosphate reductase beta subunit [Helicobacter
           pylori 2017]
          Length = 341

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|315586979|gb|ADU41360.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           pylori 35A]
          Length = 341

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|290771185|emb|CAY80753.2| Rnr2p [Saccharomyces cerevisiae EC1118]
          Length = 399

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   +   +K + +P +  K        ++ EA  +E  Y  + +P   +G+
Sbjct: 271 RDEGLHTDFACLLFAHLKNKPDPAIVEK--------IVTEAVEIEQRYFLDALPVALLGM 322

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+  
Sbjct: 323 NADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380


>gi|151945057|gb|EDN63308.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae YJM789]
 gi|190409471|gb|EDV12736.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae RM11-1a]
 gi|256271075|gb|EEU06176.1| Rnr2p [Saccharomyces cerevisiae JAY291]
          Length = 399

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+  
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380


>gi|323347997|gb|EGA82256.1| Rnr2p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 399

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   +   +K + +P +  K        ++ EA  +E  Y  + +P   +G+
Sbjct: 271 RDEGLHTDFACLLFAHLKNKPDPAIVEK--------IVTEAVEIEQRYFLDALPVALLGM 322

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           NA    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+  
Sbjct: 323 NADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380


>gi|324509007|gb|ADY43795.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
          Length = 337

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   IK        K  Q++   ++ EA  LE  Y  E +P   +G+N
Sbjct: 212 RDEGLHRDFACLLYKYIK-------HKPSQEQVYEIIKEAVSLEQEYLTEALPVDLIGMN 264

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                QY++++A+    ++G   ++    NPF +M E + ++ + NFFE RV+EYQ+   
Sbjct: 265 CRLMSQYIEYVADHLLTELGYPKVYN-ASNPFDFM-ENLSIEAKTNFFERRVSEYQRAGV 322

Query: 122 L 122
           L
Sbjct: 323 L 323


>gi|6322434|ref|NP_012508.1| Rnr2p [Saccharomyces cerevisiae S288c]
 gi|1172946|sp|P09938|RIR2_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 1;
           AltName: Full=Ribonucleotide reductase R2 subunit 1;
           AltName: Full=Ribonucleotide reductase small subunit 1
 gi|52695523|pdb|1SMQ|A Chain A, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695524|pdb|1SMQ|B Chain B, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695525|pdb|1SMQ|C Chain C, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695526|pdb|1SMQ|D Chain D, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|172450|gb|AAA34988.1| ribonucleoside diphosphate reductase small subunit [Saccharomyces
           cerevisiae]
 gi|1008142|emb|CAA89317.1| RNR2 [Saccharomyces cerevisiae]
 gi|285812874|tpg|DAA08772.1| TPA: Rnr2p [Saccharomyces cerevisiae S288c]
          Length = 399

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+  
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380


>gi|312599293|gb|ADQ91316.1| hypothetical protein BpV2_149c [Bathycoccus sp. RCC1105 virus BpV2]
          Length = 387

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H  F +++ N +K        K   +    ++ +A  +E  +  + +P   +G+N
Sbjct: 266 RDEGMHQEFAVELFNMLK-------NKPSGEIIEEIIRDAVTIEKEFITDALPCSLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    +Y++++A+R   Q+G + ++  T+NPF +M E I L  + NFFE RV +Y +  E
Sbjct: 319 SSKMSEYIEYVADRLSKQVGHDKIWN-TKNPFDFM-ENISLDGKTNFFEKRVGDYGKMDE 376


>gi|172448|gb|AAA34987.1| ribonucleotide reductase subunit 2 (RNR2) [Saccharomyces
           cerevisiae]
          Length = 399

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+  
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380


>gi|149248382|ref|XP_001528578.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146448532|gb|EDK42920.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 422

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 294 RDEGLHTDFACLLFS-------HLENRPDPKIVEKIISEAVEIEKEFFTDALPVSLLGMN 346

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G E ++K T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 347 CKLMCQYVEFVADRLLVALGNEKIYKVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 403


>gi|307110551|gb|EFN58787.1| hypothetical protein CHLNCDRAFT_34102 [Chlorella variabilis]
          Length = 335

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  +  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 207 RDEGLHTDFACLLYR-------HIHNRLSEERVAEIVTQAVEIEKEFICDALPVDLIGMN 259

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G  P      NPF WM E+I L+ + NFFE RV +YQ+  
Sbjct: 260 SRLMGQYIEFVADRLLVALG-NPKVYNVSNPFDWM-ELISLQGKTNFFEKRVGDYQKAG 316


>gi|15826569|pdb|1JK0|A Chain A, Ribonucleotide Reductase Y2y4 Heterodimer
          Length = 419

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K        ++ EA  +E  Y  + +P   +G+N
Sbjct: 291 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 343

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R     G +  +K  ENPF +M E I L  + NFFE RV++YQ+  
Sbjct: 344 ADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 400


>gi|150863757|ref|XP_001382334.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
           CBS 6054]
 gi|149385013|gb|ABN64305.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
           CBS 6054]
          Length = 417

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 286 RDEGLHTDFACLLFS-------HLQNRPDAEIVEKIITEAVKIEKEFFTDALPSSLLGMN 338

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G + ++  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 339 AELMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 395


>gi|254517517|ref|ZP_05129573.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium sp.
           7_2_43FAA]
 gi|226911266|gb|EEH96467.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium sp.
           7_2_43FAA]
          Length = 344

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 65/123 (52%), Gaps = 2/123 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++++E P ++T E + + + M+  A   EI++ +  +     G+N
Sbjct: 218 RDENTHLWLFRNILKELQLEQPEIFTDEVKNQLKEMMKTAVEHEISWGNYVIGDNIQGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
                 Y++++ N R   IGL+ +++ +  NP  W+  + D    K +FFE + T Y + 
Sbjct: 278 KNLINDYIKYLGNLRMKAIGLDAIYEGHDNNPAAWVDILSDANSVKTDFFEAKSTAYAKA 337

Query: 120 AEL 122
             L
Sbjct: 338 GAL 340


>gi|159465835|ref|XP_001691128.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
           reinhardtii]
 gi|158279814|gb|EDP05574.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
           reinhardtii]
          Length = 394

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +        T+  + + + ++ EA  +E  +  E +P   +G+N
Sbjct: 267 RDEGLHCDFACMLFSMLN-------TRIDETRVKQIIVEAVEIEQEFCTEALPVDLIGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY+QF+A+R    +G    +    NPF +M E+I L+ + NFFE RV +YQ+  
Sbjct: 320 SRLMAQYIQFVADRLLVSLGCAKQYNVV-NPFEFM-EMISLQGKTNFFEKRVGDYQKNG 376


>gi|37551487|gb|AAQ93139.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|38348909|gb|AAR17885.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|88900660|gb|ABD57572.1| VACV040 [Vaccinia virus]
 gi|90819703|gb|ABD98513.1| VACV-DUKE-051 [Vaccinia virus]
          Length = 319

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R ++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRYIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|323486976|ref|ZP_08092290.1| hypothetical protein HMPREF9474_04041 [Clostridium symbiosum
           WAL-14163]
 gi|323399688|gb|EGA92072.1| hypothetical protein HMPREF9474_04041 [Clostridium symbiosum
           WAL-14163]
          Length = 347

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+++E     R M+ E    EIA+    +     GL 
Sbjct: 219 RDENTHLWLFGSIIRELQTEEPSLFSREKTDCYREMIREGCEQEIAWGCYAIGDEVPGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N RC  +G EPL+  Y   P    W+S+  +    K +FFE R T Y 
Sbjct: 279 KQMITDYIRYLGNLRCSNLGFEPLYDGYAHEPETMAWVSQYSNANMIKTDFFEARSTAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|9632043|ref|NP_048832.1| hypothetical protein PBCV1_A476R [Paramecium bursaria Chlorella
           virus 1]
 gi|1620147|gb|AAC96843.1| contains ribonucleotide reductase (RR) signature; similar to
           tobacco RR small subunit, corresponds to Swiss-Prot
           Accession Number P49730 [Paramecium bursaria Chlorella
           virus 1]
          Length = 324

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 70/122 (57%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  FG  + ++++ + P        +  + ++ EA   E  +  + +P   +G+N
Sbjct: 200 RDEGLHQQFGELMYSKLQNKLPF-------ETVKQIITEAVENEKEFICDAIPCRLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G E ++  ++NPF +M E+I L+ + NFFE RV++YQ+   
Sbjct: 253 AELMGQYIEFVADRIFVALGYEKVYN-SKNPFAFM-ELISLQGKTNFFEKRVSDYQRPGV 310

Query: 122 LK 123
           +K
Sbjct: 311 MK 312


>gi|323692021|ref|ZP_08106269.1| ribonucleoside-diphosphate reductase [Clostridium symbiosum
           WAL-14673]
 gi|323503944|gb|EGB19758.1| ribonucleoside-diphosphate reductase [Clostridium symbiosum
           WAL-14673]
          Length = 347

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+++E     R M+ E    EIA+    +     GL 
Sbjct: 219 RDENTHLWLFGSIIRELQTEEPSLFSREKTDCYREMIREGCEQEIAWGCYAIGDEVPGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N RC  +G EPL+  Y   P    W+S+  +    K +FFE R T Y 
Sbjct: 279 KQMITDYIRYLGNLRCSNLGFEPLYDGYVHEPETMAWVSQYSNANMIKTDFFEARSTAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|163801385|ref|ZP_02195284.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
           AND4]
 gi|159174874|gb|EDP59674.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
           AND4]
          Length = 310

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 16/129 (12%)

Query: 2   RDESLHLNFG---IDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
           RDE LH +F       + Q K+          QQ+   +  EA  +E  +  E +P   +
Sbjct: 190 RDEGLHFSFSALLFKTLGQGKVT---------QQEFEEICREAVSIEKEFVTEALPVDLI 240

Query: 59  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ- 117
           G+NA    QY++  A+      G  P F  +ENPF +M  ++D++ + NFFE RVTEY+ 
Sbjct: 241 GMNAELMCQYIEHTADVIADLFGFNPAFG-SENPFDYM-RLLDMEGKTNFFEKRVTEYKR 298

Query: 118 -QGAELKWD 125
            Q  +L +D
Sbjct: 299 PQDRQLSFD 307


>gi|157952945|ref|YP_001497837.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
           virus NY2A]
 gi|155123172|gb|ABT15040.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
           virus NY2A]
          Length = 324

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  FG       ++    L  K   +  + ++ EA   E  +  + +P   +G+N
Sbjct: 200 RDEGLHQQFG-------ELMYSKLQNKLSFETIKQIIMEAVTNEKEFICDAIPCSMIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           A    QY++F+A+R    +G E ++  ++NPF +M E+I L+ + NFFE RV++YQ+
Sbjct: 253 ADLMNQYIEFVADRIFTALGYEKVYN-SKNPFAFM-ELISLEGKTNFFEKRVSDYQR 307


>gi|317012862|gb|ADU83470.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Lithuania75]
          Length = 341

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|260950985|ref|XP_002619789.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
 gi|238847361|gb|EEQ36825.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
          Length = 419

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   + + +    NP +  K        ++ EA  +E  Y  + +P   +G+
Sbjct: 289 RDEGLHTDFACLLFSHLNNRPNPAIVEK--------IITEAVTIEKEYFTDALPASLLGM 340

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N     QY++F+A+R    +G + ++  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 341 NCDLMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 398


>gi|321476700|gb|EFX87660.1| hypothetical protein DAPPUDRAFT_306462 [Daphnia pulex]
          Length = 378

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  +++   +++ A  +E  +  + +P   +G+N
Sbjct: 251 RDEGLHTDFACVMFK-------HLVNKPPKERIIEIINNAVKIEQEFLTDALPVEMIGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R   ++G   L+  +ENPF +M E I L+ + NFFE +V EYQ+  
Sbjct: 304 CRLMRQYIEFVADRLLLELGCTKLYN-SENPFDFM-EHISLEGKTNFFEKKVGEYQKAG 360


>gi|21492474|ref|NP_659593.1| Ribonucleotide reductase, small subunit [Sheeppox virus]
          Length = 321

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +K    +       +    ++ EA  +E  +    +P   +G+N
Sbjct: 196 RDEGLHCDFACLIFKHLKYPPSN-------EIITIIIKEAVSIEKEFLTNIIPVKLIGMN 248

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++FIA+R   ++G + +F  + NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 249 CDLMSQYIEFIADRLLLELGCDKVF-MSINPFDFM-ENISLEGKTNFFEKRVSEYQK 303


>gi|270000178|gb|ACZ57936.1| m015L [Myxoma virus]
          Length = 103

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 2/88 (2%)

Query: 31  QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
           +++  +++ EA ++E  +  E +P   +G+N     QY++F+A+R   ++G   +F  T 
Sbjct: 1   EERVASIIKEAVVIEQRFLTEALPVRLIGMNCELMCQYIEFVADRLIAELGYSKIFSAT- 59

Query: 91  NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           NPF +M E I L+ + NFFE RV++YQ+
Sbjct: 60  NPFDFM-ENISLEGKTNFFEKRVSDYQR 86


>gi|115387427|ref|XP_001211219.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           terreus NIH2624]
 gi|114195303|gb|EAU37003.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           terreus NIH2624]
          Length = 401

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q    ++ EA  +E  +  + +P   +G+N
Sbjct: 267 RDEGLHTDFACLLFS-------HLNNRPSKQVVEDIIVEAVAIEKEFLTDALPVALLGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G    F  T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 320 SKLMCQYIEFVADRLLVALGNNKYFHST-NPFDFM-ESISLAGKTNFFEKRVGDYQKAG 376


>gi|1808636|emb|CAA64118.1| G4L protein [Cowpox virus]
          Length = 319

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  ++++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVKSIITDAVSIEQEFLTAALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|268575178|ref|XP_002642568.1| C. briggsae CBR-RNR-2 protein [Caenorhabditis briggsae]
 gi|187023588|emb|CAP37241.1| CBR-RNR-2 protein [Caenorhabditis briggsae AF16]
          Length = 365

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  Q++   ++ +A  +E  +  E +P   +G+N
Sbjct: 240 RDEGLHRDFACLLYSMLQ-------NKLSQERIFEIIRDAVAIEQEFLTEALPVDMIGMN 292

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+    ++G + L+   +NPF +M E I +  + NFFE RV+EYQ+
Sbjct: 293 CRLMSQYIEFVADHLLQELGCDKLYN-VKNPFDFM-ENISIDGKTNFFEKRVSEYQR 347


>gi|297745764|emb|CBI15820.3| unnamed protein product [Vitis vinifera]
          Length = 269

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           R E LH +F   + + ++ + P  W     QK   ++HEA  +E  +  E +P   +G+ 
Sbjct: 141 RYEGLHCDFACLLYSLLQKQLP--W-----QKVHHIVHEAMEIETQFICEALPCALIGMK 193

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A     Y++F+ +R    +G E  +   ENPF WM E I L+   NFF+ R+ +YQ+ +
Sbjct: 194 ATLMSHYIKFVVDRLLVALGYERKYN-VENPFDWM-EFIFLQGNANFFQRRMGDYQKAS 250


>gi|108563454|ref|YP_627770.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori HPAG1]
 gi|107837227|gb|ABF85096.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori HPAG1]
          Length = 341

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|302682638|ref|XP_003031000.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
 gi|300104692|gb|EFI96097.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
          Length = 362

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   ++  ++   PH       +    ++ EA  +E  +  + +P   +G+N
Sbjct: 238 RDEGMHTDFACLLLTHMR-RRPH------PEVIEMIIKEAVAIEKEFLTDALPVSLIGMN 290

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G + ++  T NPF +M ++I L+ + NFFE RV++Y+  A
Sbjct: 291 ADLMCQYIEFVADRLLVALGNDKVWNAT-NPFDFM-DMISLQGKTNFFEKRVSDYKIAA 347


>gi|156386903|ref|XP_001634150.1| predicted protein [Nematostella vectensis]
 gi|156221230|gb|EDO42087.1| predicted protein [Nematostella vectensis]
          Length = 384

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   +L  K  ++  R ++ +A ++E  +    +P   +G+N
Sbjct: 259 RDEGLHCDFAC-------LMYKYLVNKPDEETVRGIIKDAVVIEQEFLTSALPVKLIGMN 311

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +  + ++   ENPF +M E I L+ + NF+E RV EYQ+  
Sbjct: 312 CALMRQYIEFVADRLLVALNCQKVYN-VENPFDFM-ENISLEGKTNFYEKRVGEYQKSG 368


>gi|39977011|ref|XP_369893.1| hypothetical protein MGG_06408 [Magnaporthe oryzae 70-15]
 gi|145016179|gb|EDK00669.1| hypothetical protein MGG_06408 [Magnaporthe oryzae 70-15]
          Length = 403

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + +    P+      ++  + ++ +A  +E  +  E +P   +G+N
Sbjct: 260 RDEGLHTDFACLLFSLLN-NRPN------KEVVKEIVVDAVKIEQEFLTEALPCALLGMN 312

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A   +QY++F+A+R    +G E +++ T NPF +M E I L  + NFFE RV EYQ+  
Sbjct: 313 ANLMKQYIEFVADRLLVALGNEKVYRAT-NPFDFM-ENISLGGKTNFFEKRVGEYQKAG 369


>gi|308490921|ref|XP_003107652.1| hypothetical protein CRE_13354 [Caenorhabditis remanei]
 gi|308250521|gb|EFO94473.1| hypothetical protein CRE_13354 [Caenorhabditis remanei]
          Length = 147

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +        L  K  Q++   ++ +A  +E  +  E +P   +G+N
Sbjct: 22  RDEGLHRDFACLLYSM-------LQNKLTQERIFEIIKDAVCIEQEFLTEALPVDMIGMN 74

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+    ++G + L+   +NPF +M E I +  + NFFE RV+EYQ+
Sbjct: 75  CRLMSQYIEFVADHLLAELGCDKLYN-VKNPFDFM-ENISIDGKTNFFEKRVSEYQR 129


>gi|261839822|gb|ACX99587.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori 52]
          Length = 341

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|207092116|ref|ZP_03239903.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori HPKX_438_AG0C1]
          Length = 341

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|68304258|ref|YP_249726.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
 gi|67973087|gb|AAY84053.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
          Length = 318

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 6/117 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F     N+   E   L     + K  +M  EA  +E  +    +P   +G+N
Sbjct: 194 RDEGLHTDFACLYYNKYIPEKNKLS----KTKVLSMFVEAVDIEKDFFTNALPVAMLGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           + S  +Y++F+A+R   ++G +  F  T NPF +M+  I L+ + NFFE RV EY++
Sbjct: 250 SQSMCEYIEFVADRLLFELGYDKHFN-TANPFEFMNN-ISLEGKTNFFEKRVGEYKR 304


>gi|15644992|ref|NP_207162.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori 26695]
 gi|2500210|sp|P55983|RIR2_HELPY RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2313466|gb|AAD07432.1| ribonucleoside diphosphate reductase, beta subunit (nrdB)
           [Helicobacter pylori 26695]
          Length = 341

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|317182342|dbj|BAJ60126.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F57]
          Length = 341

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|18640102|ref|NP_570176.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
 gi|18448509|gb|AAL69755.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
          Length = 320

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++   +++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSKEVITSIIIDAVNIEKEFLTVAIPVDLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G E +F    NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 248 CCLMSQYIEFVADRLLTELGCEKVFN-VYNPFSFM-EYISLEGKTNFFERRVSEYQK 302


>gi|299472857|emb|CBN80426.1| EsV-1-128 [Ectocarpus siliculosus]
          Length = 419

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH    + +         HL  K  Q++   +   A  +E  +    +P   +G++
Sbjct: 294 RDEGLHATASVLIYK-------HLRNKLPQERVHEIFEHAVSVECEFISSALPVALIGIS 346

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y++F+A+   +Q+G + ++    NPF WM ++I L+ + NFFE RV EY +   
Sbjct: 347 EKSMTEYIKFVADYWLNQLGYDKVYN-CANPFEWM-DMISLQGKTNFFENRVAEYSKPGV 404

Query: 122 L 122
           L
Sbjct: 405 L 405


>gi|308490981|ref|XP_003107682.1| CRE-RNR-2 protein [Caenorhabditis remanei]
 gi|308250551|gb|EFO94503.1| CRE-RNR-2 protein [Caenorhabditis remanei]
          Length = 377

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  Q++   ++ +A  +E  +  E +P   +G+N
Sbjct: 252 RDEGLHRDFACLLYSMLQ-------NKLTQERIFEIIRDAVCIEQEFLTEALPVDMIGMN 304

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+    ++G + L+   +NPF +M E I +  + NFFE RV+EYQ+
Sbjct: 305 CRLMSQYIEFVADHLLAELGCDKLYN-VKNPFDFM-ENISIDGKTNFFEKRVSEYQR 359


>gi|146090970|ref|XP_001466408.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           infantum JPCM5]
 gi|134070770|emb|CAM69127.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania infantum JPCM5]
          Length = 388

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 371


>gi|331245491|ref|XP_003335382.1| ribonucleoside-diphosphate reductase subunit M2 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
 gi|309314372|gb|EFP90963.1| ribonucleoside-diphosphate reductase subunit M2 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
          Length = 380

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   ++   PH          + ++ +A  +E  +  + +P   +G+N
Sbjct: 243 RDEGLHTDFACLLFTHLE-RRPH------PDTVQAIIAQAVEIEKEFLSDALPCKLIGMN 295

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T NPF +M E+I L  + NFFE RV++Y +  
Sbjct: 296 ADLMCQYIEFVADRLLVALGNEKFYNAT-NPFDFM-EMISLSGKTNFFEKRVSDYAKAG 352


>gi|146090952|ref|XP_001466403.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           infantum JPCM5]
 gi|321399462|emb|CBZ08664.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania infantum JPCM5]
          Length = 392

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 265 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 375


>gi|304321610|ref|YP_003855253.1| ribonucleoside-diphosphate reductase subunit beta [Parvularcula
           bermudensis HTCC2503]
 gi|303300512|gb|ADM10111.1| ribonucleoside-diphosphate reductase, beta subunit [Parvularcula
           bermudensis HTCC2503]
          Length = 340

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    + + ++   E   L T                LE  +       G V G
Sbjct: 197 IRDESLHCEGMVRLFHEFARETGAL-TPAVADDIVDCCKTVVDLEDKFIELAFEAGEVEG 255

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     + Y++ IA+ R  Q+GL P+F    +P PW+ E+++  +  NFFE R TEY +G
Sbjct: 256 MTPDDIKAYIRHIADWRLSQLGLPPVFAADNHPLPWLREILNGVEHANFFEARATEYSKG 315

Query: 120 A 120
           A
Sbjct: 316 A 316


>gi|89097912|ref|ZP_01170799.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           NRRL B-14911]
 gi|89087414|gb|EAR66528.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           NRRL B-14911]
          Length = 353

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 4/118 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH++  + +  +I  E P   TKE  + + +   EA  LEI +A   +     G+ 
Sbjct: 224 RDEQLHVDLFVKIFREILDEYPEQNTKELAEFAESTFREAAYLEIEWARSIIGDKISGIL 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS--EVIDLKKEKNFFETRVTEY 116
               E+Y++F AN R +Q+G    F+ +  NP  W+   E +DL K  +FFE +  +Y
Sbjct: 284 IGDVEEYIRFYANVRSNQLGFNRPFEGSRTNPLRWIKAYEEVDLGK-SDFFEQKPRQY 340


>gi|291562343|emb|CBL41159.1| Ribonucleotide reductase, beta subunit [butyrate-producing
           bacterium SS3/4]
          Length = 346

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+T    Q  R M+ E    EIA+ H  +     GLN
Sbjct: 218 RDENTHLWLFRNIITELQKEQPELFTAGSVQALREMMREGVEQEIAWGHYVIGDDIPGLN 277

Query: 62  APSCEQYMQFIANRRCHQIG---LEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N R   +G   L P F+       W+S+  D    K +FFE R T Y 
Sbjct: 278 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 337

Query: 118 QGAEL 122
           +   L
Sbjct: 338 KSTAL 342


>gi|217034470|ref|ZP_03439882.1| hypothetical protein HP9810_890g15 [Helicobacter pylori 98-10]
 gi|216943072|gb|EEC22549.1| hypothetical protein HP9810_890g15 [Helicobacter pylori 98-10]
 gi|317177841|dbj|BAJ55630.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F16]
          Length = 341

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIESLWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|317009697|gb|ADU80277.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori India7]
          Length = 341

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|289449785|ref|YP_003474451.1| ribonucleoside-diphosphate reductase subunit beta [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|289184332|gb|ADC90757.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
          Length = 400

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 8/127 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++++++++E P L++ E  ++ R M+ E    EIA+ H  +     GL 
Sbjct: 272 RDENTHLWLFRNILSELQVERPDLFSAELVEEYRAMIKEGAEQEIAWGHYVLGDDIPGLT 331

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115
                 Y+Q++AN R   +G    + Y +N        W+S+  D    K +FFE + T 
Sbjct: 332 RQMVTDYIQYLANLRAQNLGFA--YIYPDNHSEPASMSWISQYSDANMVKTDFFEAKSTA 389

Query: 116 YQQGAEL 122
           Y +   +
Sbjct: 390 YAKSTAM 396


>gi|208434985|ref|YP_002266651.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori G27]
 gi|208432914|gb|ACI27785.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori G27]
          Length = 341

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|217032591|ref|ZP_03438080.1| hypothetical protein HPB128_159g17 [Helicobacter pylori B128]
 gi|298735909|ref|YP_003728434.1| ribonucleoside-diphosphate reductase subunit beta [Helicobacter
           pylori B8]
 gi|216945727|gb|EEC24352.1| hypothetical protein HPB128_159g17 [Helicobacter pylori B128]
 gi|298355098|emb|CBI65970.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           pylori B8]
          Length = 341

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  +         +GL 
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWGDYITQGKILGLT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
           +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335


>gi|255037048|ref|YP_003087669.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
           18053]
 gi|254949804|gb|ACT94504.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
           18053]
          Length = 331

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F   +  +      H+  +  Q++   ++ +A  +E  +  E +P   +G+N
Sbjct: 201 RDEGLHCEFACLLYTK------HILNQLPQERVIEIMLDAVEIEKEFVSEALPVSLIGMN 254

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A   +QY+++IA+    ++G    F  + NPF +M E+I L  + NFFE RV EYQ+  
Sbjct: 255 ADLMKQYIEYIADFWLERLGCPKQFG-SANPFDFM-ELISLPGKTNFFEKRVGEYQKAG 311


>gi|156545974|ref|XP_001606963.1| PREDICTED: similar to ENSANGP00000013211 [Nasonia vitripennis]
          Length = 388

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K  +++  +++ +A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HIVQKPSEERVISIIKDAVTIEQEFLTDALPVEMIGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G   ++  +ENPF +M E I L+ + NFFE +V EYQ+
Sbjct: 314 CRLMCQYIEFVADRLLGELGCPKVYN-SENPFDFM-EHISLEGKTNFFEKKVGEYQK 368


>gi|50286273|ref|XP_445565.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524870|emb|CAG58476.1| unnamed protein product [Candida glabrata]
          Length = 400

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K   +    ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLNHKPDPEVVERIVTEAVEIEQRYFLDALPVALLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R     G + ++   ENPF +M E I L  + NFFE RV++YQ+  
Sbjct: 324 AQLMNQYVEFVADRLLVAFGNKKVYN-VENPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380


>gi|226294144|gb|EEH49564.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb18]
          Length = 325

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++    H  + E  QK   ++ EA  +E  +  + +P   +G+N
Sbjct: 186 RDEGLHTDFACLLFSHLR----HRPSPEAVQK---IITEAVAIEQEFLTDALPCALLGMN 238

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G + ++  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 239 AKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMDN-ISLTGKTNFFEKRVGDYQKAG 295


>gi|225684487|gb|EEH22771.1| ribonucleoside-diphosphate reductase small chain A
           [Paracoccidioides brasiliensis Pb03]
          Length = 413

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++    H  + E  QK   ++ EA  +E  +  + +P   +G+N
Sbjct: 274 RDEGLHTDFACLLFSHLR----HRPSPEAVQK---IITEAVAIEQEFLTDALPCALLGMN 326

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G + ++  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 327 AKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMDN-ISLTGKTNFFEKRVGDYQKAG 383


>gi|544843|gb|AAB29634.1| C8L product [variola virus VAR, India-1967, Peptide, 333 aa]
          Length = 333

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 209 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + YM+F+A+R   ++G + ++  T NP  +M E I L+ + NFFE RV EYQ+
Sbjct: 262 CEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFFEKRVGEYQK 316


>gi|157953769|ref|YP_001498660.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
           virus AR158]
 gi|156068417|gb|ABU44124.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
           virus AR158]
          Length = 324

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 70/122 (57%), Gaps = 9/122 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  FG  + ++++ + P        +  + ++ EA   E  +  + +P   +G+N
Sbjct: 200 RDEGLHQQFGELMYSKLQNKLPF-------ETVKQIITEAVENEKEFICDAIPCRLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++F+A+R    +G E ++  ++NPF +M E+I L+ + NFFE RV++YQ+   
Sbjct: 253 SELMGQYIEFVADRIFIALGYEKVYN-SKNPFAFM-ELISLQGKTNFFEKRVSDYQRPGV 310

Query: 122 LK 123
           +K
Sbjct: 311 MK 312


>gi|313235850|emb|CBY19835.1| unnamed protein product [Oikopleura dioica]
          Length = 382

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   H+  K  Q++   ++ +A  +E  +  + +P   +G+N
Sbjct: 251 RDEGLHTDFAC-------LMYKHMVQKPSQEQIIAIIRDAVSIEQEFLTDALPVRLIGMN 303

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               + Y++F+A+R   ++    ++K  ENPF +M E+I L+ + NFFE +V+EY +  
Sbjct: 304 CDLMKTYIEFVADRLLVELDCPKIYK-VENPFDFM-EMISLEGKTNFFEKKVSEYARAG 360


>gi|306478720|ref|NP_042072.2| Ribonucleoside-diphosphate reductase small chain [Variola virus]
 gi|464615|sp|P33799|RIR2_VAR67 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 319

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + YM+F+A+R   ++G + ++  T NP  +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|297209|emb|CAA48969.1| C8L [Variola virus]
 gi|745144|prf||2015436AF C8L gene
          Length = 333

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R+++ +A  +E  +    +P   +G+N
Sbjct: 209 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + YM+F+A+R   ++G + ++  T NP  +M E I L+ + NFFE RV EYQ+
Sbjct: 262 CEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFFEKRVGEYQK 316


>gi|45184688|ref|NP_982406.1| AAL136Cp [Ashbya gossypii ATCC 10895]
 gi|44980034|gb|AAS50230.1| AAL136Cp [Ashbya gossypii ATCC 10895]
          Length = 422

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K   +    ++ EA  +E  Y  + +P   +G+N
Sbjct: 292 RDEGLHTDFACLLF-------AHLNNKPDTEIVEKIITEAVEIEKRYFQDAIPVALLGMN 344

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  + NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 345 SSLMNQYVEFVADRLLVALGNKKYYNVS-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 401


>gi|190896546|gb|ACE96786.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|190896508|gb|ACE96767.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896514|gb|ACE96770.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896522|gb|ACE96774.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896540|gb|ACE96783.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896542|gb|ACE96784.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|283955349|ref|ZP_06372848.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 414]
 gi|283793109|gb|EFC31879.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 414]
          Length = 340

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334


>gi|190896520|gb|ACE96773.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|313213932|emb|CBY40745.1| unnamed protein product [Oikopleura dioica]
          Length = 418

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   H+  K  Q++   ++ +A  +E  +  + +P   +G+N
Sbjct: 287 RDEGLHTDFAC-------LMYKHMVQKPSQEQIIAIIRDAVSIEQEFLTDALPVRLIGMN 339

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               + Y++F+A+R   ++    ++K  ENPF +M E+I L+ + NFFE +V+EY +  
Sbjct: 340 CDLMKTYIEFVADRLLVELDCPKIYK-VENPFDFM-EMISLEGKTNFFEKKVSEYARAG 396


>gi|190896510|gb|ACE96768.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896556|gb|ACE96791.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896562|gb|ACE96794.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|67515571|ref|XP_657671.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
 gi|40746089|gb|EAA65245.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
 gi|259489743|tpe|CBF90266.1| TPA: Ribonucleotide reductase [Source:UniProtKB/TrEMBL;Acc:Q9HEW8]
           [Aspergillus nidulans FGSC A4]
          Length = 406

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHTDFACLLFS-------HLNWRPSKKVVEDIIVEAVAIEKEFLTDALPCALLGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G +  F  T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 322 AKLMCQYIEFVADRLLVALGNKKYFNAT-NPFDFM-ESISLAGKTNFFEKRVGDYQKAG 378


>gi|295670491|ref|XP_002795793.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb01]
 gi|226284878|gb|EEH40444.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb01]
          Length = 325

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++    H  + E  QK   ++ EA  +E  +  + +P   +G+N
Sbjct: 186 RDEGLHTDFACLLFSHLR----HRPSPEAVQK---IITEAVAIEQEFLTDALPCALLGMN 238

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G + ++  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 239 AKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMDN-ISLTGKTNFFEKRVGDYQKAG 295


>gi|57237291|ref|YP_178304.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni RM1221]
 gi|148926379|ref|ZP_01810063.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|57166095|gb|AAW34874.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni RM1221]
 gi|145844771|gb|EDK21876.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|315057661|gb|ADT71990.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Campylobacter jejuni subsp. jejuni S3]
          Length = 340

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334


>gi|86149605|ref|ZP_01067835.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|86151167|ref|ZP_01069382.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|86153704|ref|ZP_01071907.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|88597173|ref|ZP_01100408.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|121613260|ref|YP_999944.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|157414529|ref|YP_001481785.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|167004901|ref|ZP_02270659.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|218561895|ref|YP_002343674.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|283955655|ref|ZP_06373148.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|315123818|ref|YP_004065822.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|85839873|gb|EAQ57132.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|85841514|gb|EAQ58761.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|85842665|gb|EAQ59877.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|87250215|gb|EAQ73173.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|88190234|gb|EAQ94208.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|112359601|emb|CAL34386.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|157385493|gb|ABV51808.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|283792880|gb|EFC31656.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|284925507|gb|ADC27859.1| ribonucleoside-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni IA3902]
 gi|307747171|gb|ADN90441.1| Ribonucleoside-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni M1]
 gi|315017540|gb|ADT65633.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|315928159|gb|EFV07477.1| ribonucleotide reductase, small chain family protein [Campylobacter
           jejuni subsp. jejuni DFVF1099]
 gi|315932030|gb|EFV10983.1| ribonucleotide reductase, small chain family protein [Campylobacter
           jejuni subsp. jejuni 327]
          Length = 340

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334


>gi|190896550|gb|ACE96788.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|190896516|gb|ACE96771.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|205356539|ref|ZP_03223302.1| ribonucleoside diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|205345544|gb|EDZ32184.1| ribonucleoside diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8421]
          Length = 340

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334


>gi|190896532|gb|ACE96779.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896554|gb|ACE96790.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|190896538|gb|ACE96782.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896548|gb|ACE96787.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896558|gb|ACE96792.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|190896564|gb|ACE96795.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|190896552|gb|ACE96789.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++        K  +++ + ++ +A  +E  +  + +P   VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFVVDALPCALVGMN 170

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
                QY++F+A+R    +G   ++    NPF  M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFFEKRVGEY 223


>gi|254572986|ref|XP_002493602.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia pastoris GS115]
 gi|238033401|emb|CAY71423.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia pastoris GS115]
 gi|328354568|emb|CCA40965.1| ribonucleoside-diphosphate reductase subunit M2 [Pichia pastoris
           CBS 7435]
          Length = 400

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  Y  + +P   +G+N
Sbjct: 271 RDEGLHTDFACLLFS-------HLNNRASEEIVEKIITEAVEIEKRYFTDALPVSLLGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++    NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 324 CSLMCQYVEFVADRLLVALGNKKVYN-VNNPFDFM-ENISLAGKTNFFEKRVSDYQKAG 380


>gi|154340038|ref|XP_001565976.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134063294|emb|CAM45500.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 388

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYNATQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 371


>gi|308809930|ref|XP_003082274.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
 gi|116060742|emb|CAL57220.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
          Length = 382

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 17/123 (13%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLH----EATLLEIAYAHETMPKGF 57
           RDE LH +F   +   +  +NP          S   LH    +A  +E  +  + +    
Sbjct: 256 RDEGLHCDFACLLYGML--QNP---------LSEATLHHIVGDAVKIEKEFVCDALSCSL 304

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           VG+NA     Y++F+A+R   Q+G   LF    NPF WM E+I L+ + NFFE RV +YQ
Sbjct: 305 VGMNADMMSTYIEFVADRLLIQLGASKLFNAV-NPFDWM-ELISLQGKANFFEHRVDQYQ 362

Query: 118 QGA 120
           +  
Sbjct: 363 KAG 365


>gi|11878241|gb|AAG40862.1| ribonucleotide reductase [Emericella nidulans]
          Length = 406

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHTDFACLLFS-------HLNWRPSKKVVEDIIVEAVAIEKEFLTDALPCALLGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G +  F  T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 322 AKLMCQYIEFVADRLLVALGNKEYFNAT-NPFDFM-ESISLAGKTNFFEKRVGDYQKAG 378


>gi|145249942|ref|XP_001401310.1| ribonucleoside-diphosphate reductase small chain [Aspergillus niger
           CBS 513.88]
 gi|134081995|emb|CAK46680.1| unnamed protein product [Aspergillus niger]
          Length = 396

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q    ++ EA  +E  +  + +P   +G+N
Sbjct: 263 RDEGLHTDFACLLFS-------HLNNRPSKQVVEDIIVEAVGIEQEFLTDALPVALLGMN 315

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 316 SKLMCQYIEFVADRLLVALGNKKYYNAT-NPFDFM-ESISLAGKTNFFEKRVGDYQKAG 372


>gi|110763195|ref|XP_397443.3| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform
           1 [Apis mellifera]
          Length = 384

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I ++ P        ++  +++ +A  +E  +  + +P   +G+N
Sbjct: 259 RDEGLHCDFACLMFKHI-VQKPSC------ERVTSIIKDAVKIEQEFLTDALPVEMIGMN 311

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                QY++F+A+R   ++G + ++  +ENPF +M E I L+ + NFFE +V EYQ+
Sbjct: 312 CKLMCQYIEFVADRLLVELGCKKIY-MSENPFDFM-EHISLEGKTNFFEKKVGEYQK 366


>gi|225561749|gb|EEH10029.1| ribonucleotide reductase M2 B [Ajellomyces capsulatus G186AR]
 gi|240275354|gb|EER38868.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
           capsulatus H143]
 gi|325091193|gb|EGC44503.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
           capsulatus H88]
          Length = 413

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 274 RDEGLHTDFACLLFS-------HLRHRPSPEAVEKIITEAVTIEQEFLSDALPVALLGMN 326

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G + ++  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 327 AKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 383


>gi|154337607|ref|XP_001565036.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134062075|emb|CAM45178.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 392

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 265 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYNATQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 375


>gi|314055235|ref|YP_004063573.1| ribonucleoside-diphosphate reductase small subunit-possible host
           origin [Ostreococcus tauri virus 2]
 gi|313575126|emb|CBI70139.1| ribonucleoside-diphosphate reductase small subunit-possible host
           origin [Ostreococcus tauri virus 2]
          Length = 408

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F +++   ++        +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 287 RDEGLHQEFAVELFKTLR-------NRPTTETIHAIVKEAVEIEKGFILDALPCNLIGMN 339

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           +    +Y++++++R   Q+G+ P++   +NPF +M E I L  + NFFE RV +Y +
Sbjct: 340 SEKMSEYIEYVSDRLLKQVGVPPIWN-AKNPFDFM-ENISLDGKTNFFEKRVGDYGK 394


>gi|170089003|ref|XP_001875724.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
 gi|164648984|gb|EDR13226.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
          Length = 422

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + + +K   PH       +  + ++ EA  +E  +  + +P   +G+N
Sbjct: 281 RDEGMHTDFACLLFSHLK-RRPH------PEVVKHIIVEAVKIEQEFLTDALPVKLIGMN 333

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T NPF +M ++I L+ + NFFE RV++Y +  
Sbjct: 334 ADLMCQYIEFVADRLLVSLGNEKHYNKT-NPFDFM-DMISLQGKTNFFEKRVSDYSKAG 390


>gi|17974949|ref|NP_536463.1| C10L [Monkeypox virus Zaire-96-I-16]
 gi|17529816|gb|AAL40494.1|AF380138_36 C10L [Monkeypox virus Zaire-96-I-16]
 gi|51342196|gb|AAU01240.1| MPXV-WRAIR030 [Monkeypox virus]
 gi|58220500|gb|AAW67788.1| MPXV-SL-030 [Monkeypox virus]
 gi|59858836|gb|AAX09131.1| MPXV-COP-030 [Monkeypox virus]
 gi|68448710|gb|AAY96833.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68448912|gb|AAY97034.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449113|gb|AAY97234.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449313|gb|AAY97433.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449512|gb|AAY97631.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|300872658|gb|ADK39060.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R ++  A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|3220181|gb|AAC23560.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
          Length = 354

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 227 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 281 AELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 337


>gi|322493026|emb|CBZ28311.1| ribonucleoside-diphosphate reductase small chain,putative
           [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 388

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 261 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 371


>gi|261189551|ref|XP_002621186.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis SLH14081]
 gi|239591422|gb|EEQ74003.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis SLH14081]
 gi|239613047|gb|EEQ90034.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis ER-3]
 gi|327356917|gb|EGE85774.1| ribonucleotide reductase M2 B [Ajellomyces dermatitidis ATCC 18188]
          Length = 413

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 274 RDEGLHTDFACLLFS-------HLRHRPSPEAVERIITEAVTIEQEFLSDALPVALLGMN 326

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G + ++  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 327 AKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 383


>gi|168015485|ref|XP_001760281.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688661|gb|EDQ75037.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 330

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +         K  + +   ++ EA ++E  +  E +    VG+N
Sbjct: 200 RDEGLHCDFACLLYTLLN-------NKLSEDRVYEIVCEAVVIEQEFVCEALSCDLVGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                +Y+ F+A+R    +G    +  + NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 253 KTLMSEYIDFVADRLLVSLGYPKKYN-SHNPFDWM-ELISLQGKTNFFEKRVGEYQKAS 309


>gi|323098642|gb|ADX22879.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R ++  A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|307192386|gb|EFN75622.1| Ribonucleoside-diphosphate reductase subunit M2 [Harpegnathos
           saltator]
          Length = 344

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   + I+ P        ++ +T++ +A  +E  +  + +P   +G+N
Sbjct: 214 RDEGLHCDFACLMFKHV-IQKPSF------ERVKTIIMDAVEIEKEFLTQALPVKLIGMN 266

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 Y++F+A+R    +G + ++  +ENPF +M + I L+ + NFFE +V EY++
Sbjct: 267 CTLMCTYIEFVADRLFVALGFDKVYN-SENPFSFM-DFISLEGKTNFFEKKVGEYKK 321


>gi|323098445|gb|ADX22683.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++  R ++  A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|322491821|emb|CBZ27094.1| ribonucleoside-diphosphate reductase small chain,putative
           [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 392

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 265 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 375


>gi|13242599|ref|NP_077613.1| EsV-1-128 [Ectocarpus siliculosus virus 1]
 gi|13177402|gb|AAK14546.1|AF204951_128 EsV-1-128 [Ectocarpus siliculosus virus 1]
          Length = 419

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 9/121 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH    + +   +K   P       +++   +   A  +E  +    +P   +G++
Sbjct: 294 RDEGLHATASVLIYKHLKNRLP-------RERVHEIFKHAVSVECEFISSALPVALIGIS 346

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
             S  +Y++F+A+   +Q+G + ++    NPF WM ++I L+ + NFFE RV EY +   
Sbjct: 347 EKSMTEYIKFVADYWLNQLGYDKVYN-CANPFEWM-DMISLQGKTNFFENRVAEYSKPGV 404

Query: 122 L 122
           L
Sbjct: 405 L 405


>gi|225434341|ref|XP_002276454.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 841

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           R E LH +F   + + ++ + P  W     QK   ++HEA  +E  +  E +P   +G+ 
Sbjct: 713 RYEGLHCDFACLLYSLLQKQLP--W-----QKVHHIVHEAMEIETQFICEALPCALIGMK 765

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A     Y++F+ +R    +G E  +   ENPF WM E I L+   NFF+ R+ +YQ+ +
Sbjct: 766 ATLMSHYIKFVVDRLLVALGYERKYN-VENPFDWM-EFIFLQGNANFFQRRMGDYQKAS 822


>gi|317062933|ref|ZP_07927418.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           ulcerans ATCC 49185]
 gi|313688609|gb|EFS25444.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           ulcerans ATCC 49185]
          Length = 353

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +I+ ENP  +  E   +  +M  +A   EI + +  +    +G+ 
Sbjct: 225 RDELSHVVIFQHLLKEIRNENPDFFNDE---EIYSMFRKAVEQEINWTNHIIGNQILGIT 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
             + EQY +++AN R   IGL+P+++ + +NP+  +++  D + E     NFFE  VT Y
Sbjct: 282 EETTEQYTKWLANERLRSIGLKPIYEGFNKNPYKHLTKFADTEGEGNVKANFFEGTVTSY 341

Query: 117 QQGAELK-WD 125
              + +  WD
Sbjct: 342 NMSSSIDGWD 351


>gi|313768358|ref|YP_004062038.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
 gi|312599054|gb|ADQ91078.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
          Length = 388

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 68/128 (53%), Gaps = 13/128 (10%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F +++   ++        K   +   +++ EA  +E  +  + +P   +G+N
Sbjct: 267 RDEGLHQEFAVELFKLLR-------NKPSTETIHSIVKEAVEIEKNFILDALPCNLIGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY----Q 117
           +    +Y++++++R   Q+G  P++  ++NPF +M E I L  + NFFE RV +Y     
Sbjct: 320 SEKMSEYIEYVSDRLLKQVGQPPIWN-SKNPFDFM-ENISLDGKTNFFEKRVGDYGKLDD 377

Query: 118 QGAELKWD 125
             AE+ +D
Sbjct: 378 DSAEIGFD 385


>gi|325475472|gb|EGC78653.1| ribonucleoside-diphosphate reductase [Treponema denticola F0402]
          Length = 351

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T +  +  R M+ E    EIA+ +  +     GLN
Sbjct: 223 RDENTHLWLFRSMIQELQKEEPQLFTPQNVELFRGMIREGCEQEIAWGNYVIGNDIPGLN 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
           +     Y+Q++ N RC  +G  P++  + E P    W+S+  +    K +FFE + T Y 
Sbjct: 283 SQMITDYIQYLGNLRCENLGFAPIYDGHKEEPQSMSWVSQYSNANLIKTDFFEAKSTAYA 342

Query: 118 QGAEL 122
           + + +
Sbjct: 343 KSSAM 347


>gi|257468678|ref|ZP_05632772.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           ulcerans ATCC 49185]
          Length = 348

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +I+ ENP  +  E   +  +M  +A   EI + +  +    +G+ 
Sbjct: 220 RDELSHVVIFQHLLKEIRNENPDFFNDE---EIYSMFRKAVEQEINWTNHIIGNQILGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
             + EQY +++AN R   IGL+P+++ + +NP+  +++  D + E     NFFE  VT Y
Sbjct: 277 EETTEQYTKWLANERLRSIGLKPIYEGFNKNPYKHLTKFADTEGEGNVKANFFEGTVTSY 336

Query: 117 QQGAELK-WD 125
              + +  WD
Sbjct: 337 NMSSSIDGWD 346


>gi|330921941|ref|XP_003299625.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
 gi|311326599|gb|EFQ92269.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
          Length = 410

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + + +         +  ++  R ++ EA  +E  +  + +P   +G+N
Sbjct: 267 RDEGMHTDFACLLFSLLN-------NRPSKESVRAIITEAVEIEQEFLSDALPCALLGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G   ++  T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 320 ATLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAG 376


>gi|241951066|ref|XP_002418255.1| ribonucleoside-diphosphate reductase small chain 1, putative;
           ribonucleotide reductase r2 subunit 1, putative;
           ribonucleotide reductase small subunit 1, putative
           [Candida dubliniensis CD36]
 gi|223641594|emb|CAX43555.1| ribonucleoside-diphosphate reductase small chain 1, putative
           [Candida dubliniensis CD36]
          Length = 413

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  +   +    ++ EA  +E  Y  + +P   +G+N
Sbjct: 285 RDEGLHTDFACLLF-------AHLQNRPSPEIVEKIITEAVDVEKEYFTDALPVSLLGMN 337

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 338 CNLMCQYIEFVADRLLLALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 394


>gi|68481406|ref|XP_715342.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
 gi|68481537|ref|XP_715277.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
 gi|46436893|gb|EAK96248.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
 gi|46436961|gb|EAK96315.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
 gi|238882096|gb|EEQ45734.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           albicans WO-1]
          Length = 413

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  +   +    ++ EA  +E  Y  + +P   +G+N
Sbjct: 285 RDEGLHTDFACLLF-------AHLQNRPSPEIVERIITEAVDVEKEYFTDALPVSLLGMN 337

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 338 CNLMCQYIEFVADRLLLALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 394


>gi|325831705|ref|ZP_08164922.1| ribonucleoside-diphosphate reductase, beta subunit [Eggerthella sp.
           HGA1]
 gi|325486576|gb|EGC89025.1| ribonucleoside-diphosphate reductase, beta subunit [Eggerthella sp.
           HGA1]
          Length = 347

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++K E P L+T E  ++ R M+ E    EI + H  +     GLN
Sbjct: 219 RDENTHLWLFRNILLELKEEEPELFTPELVEEYRAMIKEGCEQEIRWGHYAIGDEVAGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+Q++ N RC Q+G EPL++  E       W+S+  +    K +FFE R T Y 
Sbjct: 279 KQMVTDYIQYLGNLRCTQLGFEPLYEGHEREPESMSWVSQFSNANMIKTDFFEARSTAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|312216546|emb|CBX96496.1| similar to ribonucleoside-diphosphate reductase subunit M2
           [Leptosphaeria maculans]
          Length = 410

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + + +        T+  ++  + ++ EA  +E  +  + +P   +G+N
Sbjct: 266 RDEGMHTDFACLLFSLLN-------TRPSKESVQAIITEAVEIEKEFLSDALPCALLGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G    +  T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 319 ATLMCQYIEFVADRLLLSLGNTKFYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAG 375


>gi|215401283|ref|YP_002332587.1| ribonucleotide reductase small subunit [Helicoverpa armigera
           multiple nucleopolyhedrovirus]
 gi|198448783|gb|ACH88573.1| ribonucleotide reductase small subunit [Helicoverpa armigera
           multiple nucleopolyhedrovirus]
          Length = 313

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 8/116 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F           N  +  K   +    M  EA  +E  +  + +P   +G+N
Sbjct: 191 RDEGMHTDFAC------LYYNTRVNEKLSYETILDMFKEAVDIEKEFFTDALPVALLGMN 244

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           A    +Y++F+A+R   Q+G +P +    NPFP+M+  I L+ + NFFE RV EY+
Sbjct: 245 ADMMCEYIEFVADRLLLQLG-QPKYYNARNPFPFMNN-ISLEGKTNFFERRVGEYK 298


>gi|22549454|ref|NP_689227.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-B]
 gi|22476633|gb|AAM95039.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-B]
          Length = 313

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 8/116 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F           N  +  K   +    M  EA  +E  +  + +P   +G+N
Sbjct: 191 RDEGMHTDFAC------LYYNTRVNEKLSYETILDMFKEAVDIEKEFFTDALPVALLGMN 244

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           A    +Y++F+A+R   Q+G +P +    NPFP+M+  I L+ + NFFE RV EY+
Sbjct: 245 ADMMCEYIEFVADRLLLQLG-QPKYYNARNPFPFMNN-ISLEGKTNFFERRVGEYK 298


>gi|254796877|ref|YP_003081714.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
           risticii str. Illinois]
 gi|254590113|gb|ACT69475.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
           risticii str. Illinois]
          Length = 286

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 9/130 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTK---EFQQKSRTMLH-EATLLEIAYAHETMPKG 56
           +RDE+LH N    +     +EN     K   E ++    M+H E   +++A+    +   
Sbjct: 153 VRDETLHSNSITKLFRTFLLENDIDKLKLEAEIREICDAMVHHEDAFIDLAFEMGDVE-- 210

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
             GL A   ++Y+++IAN R  Q+G   +++   NP  W+  V++  +  NFFE + TEY
Sbjct: 211 --GLKASEVKEYIRYIANLRLKQLGFSEIYEQKVNPLLWLEAVLNTVEHTNFFENKATEY 268

Query: 117 QQGA-ELKWD 125
            + A +  WD
Sbjct: 269 SKAATKGTWD 278


>gi|328855581|gb|EGG04707.1| hypothetical protein MELLADRAFT_49061 [Melampsora larici-populina
           98AG31]
          Length = 385

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +      + ++ +A  +E  +  + +P   +G+N
Sbjct: 248 RDEGLHTDFACLLFS-------HLERRPHPDTVQAIISQAVEIEKEFLSDALPCKLIGMN 300

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G +  +   ENPF +M E+I L  + NFFE RV++Y +  
Sbjct: 301 ADLMCQYIEFVADRLLVALGNDKFYN-AENPFDFM-EMISLSGKTNFFEKRVSDYAKAG 357


>gi|239826135|ref|YP_002948759.1| ribonucleoside-diphosphate reductase [Geobacillus sp. WCH70]
 gi|239806428|gb|ACS23493.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. WCH70]
          Length = 346

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++    +  ++  E P   T E  Q  R    +A  LEI +A+  +     G++
Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYNTPELAQFVRETFIKAAKLEIEWANYIIGNDIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118
                 Y++F AN R HQ+G + P   Y  NP  W+   E +DL K  +FFE +  +Y +
Sbjct: 278 MHDLSAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGK-SDFFEQKSRQYTK 336


>gi|320164906|gb|EFW41805.1| ribonucleotide reductase m2 polypeptide [Capsaspora owczarzaki ATCC
           30864]
          Length = 352

 Score = 60.5 bits (145), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +         +        ++ +A  +E  +  + +P   +G+N
Sbjct: 227 RDEGLHCDFACMLFGLLN-------NRPSNADVLAIIKDAVAIEQEFLTDALPVALIGMN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R    +G E  +K  ENPF +M ++I L+ + NFFE RV EYQ+
Sbjct: 280 GGLMKTYIEFVADRLLVALGQEKHYK-VENPFDFM-DLISLQGKTNFFERRVGEYQK 334


>gi|300706309|ref|XP_002995432.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
 gi|239604534|gb|EEQ81761.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
          Length = 325

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 13/119 (10%)

Query: 2   RDESLHLNFGIDVINQIKI-ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   ++NQ  I ++PH+           ++ EA  +E  +   ++P   +G+
Sbjct: 202 RDEGLHCDFAC-LLNQYLINKSPHI---------LDIVKEAVEIEKEFLGVSLPVNLIGM 251

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           N     QY++F+A+R    +GLE  +  T NPF +M E I L  + NFF+ R ++YQ+ 
Sbjct: 252 NCKLMCQYIEFVADRLLINLGLEKYYN-TLNPFDFM-ENISLVGKTNFFDKRESQYQKA 308


>gi|322795965|gb|EFZ18591.1| hypothetical protein SINV_11129 [Solenopsis invicta]
          Length = 426

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I I+ P        +  ++++ +A  +E  +  + +P   +G+N
Sbjct: 296 RDEGLHCDFACLIFKHI-IQKPSF------EHVKSIIMDAVEIEKEFLTQALPVELIGMN 348

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 Y++F+A+R    +G E ++  +ENPF +M+  I L+ + NFFE +V EY++
Sbjct: 349 CSLMCNYIEFVADRLFVALGFEKVYN-SENPFSFMN-FISLEGKTNFFEKKVGEYKK 403


>gi|189199548|ref|XP_001936111.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187983210|gb|EDU48698.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 410

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + + +         +   ++ R ++ EA  +E  +  + +P   +G+N
Sbjct: 267 RDEGMHTDFACLLFSLLN-------NRPSNEEVRAIITEAVEIEQEFLSDALPCALLGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G   ++  T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 320 ATLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAG 376


>gi|328700093|ref|XP_001944536.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Acyrthosiphon pisum]
          Length = 361

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  K  Q     ++ EA  +E  +    +P   VG++
Sbjct: 233 RDEGLHTDFACLLFK-------HLEQKPPQAVITHIICEAVTIEQDFLTNALPVRMVGMS 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                 Y++F+A+R  +++G   +++ + NPFP+M ++I  + + NFFE RV +YQ+ +
Sbjct: 286 CEKMAVYIEFVADRLLNELGCPTVYR-SSNPFPFM-DLISQQGKTNFFEKRVGDYQKAS 342


>gi|302843870|ref|XP_002953476.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
           nagariensis]
 gi|300261235|gb|EFJ45449.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
           nagariensis]
          Length = 400

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQ-KSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   +   +        +K+ ++ + + ++ EA  +E  +  + +P   +G+
Sbjct: 273 RDEGLHCDFACLLYGML--------SKQLEESRIKEIICEAVDIENEFCTDALPVDLIGM 324

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N+    QY++F+A+R    +G    +  T NPF +M ++I L+ + NFFE RV +YQ+  
Sbjct: 325 NSRLMAQYIEFVADRLLVALGCSKAYNVT-NPFDFM-DMISLQGKTNFFEKRVGDYQKSG 382


>gi|154149104|ref|YP_001405803.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           hominis ATCC BAA-381]
 gi|153805113|gb|ABS52120.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           hominis ATCC BAA-381]
          Length = 340

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+  +   K   M  +A  LEI +         +GL 
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNDKNIAKIYEMFEKAGELEIKWGKYITQNQIMGLT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ + R   IGL   +    +P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DEIIEEYIHYLVDNRLSAIGLNKKYN-ARHPIKWVDDFAKFNDQKSNFFESKVTNYSKGS 334


>gi|157869457|ref|XP_001683280.1| ribonucleoside-diphosphate reductase small chain [Leishmania major
           strain Friedlin]
 gi|68224164|emb|CAJ04657.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania major strain Friedlin]
          Length = 392

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         + N H+  K  +++   ++ +A  +E  +  + +P   +G+N
Sbjct: 265 RDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYHSTQ-PFEFM-EMISLQGKTNFFERKVGEYQKAG 375


>gi|15613065|ref|NP_241368.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           halodurans C-125]
 gi|14195134|sp|Q9KFH7|RIR2_BACHD RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|10173115|dbj|BAB04221.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           halodurans C-125]
          Length = 345

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH+    ++  ++ +E P L T+E +   +T L +A  LE  +    +     G+N
Sbjct: 217 RDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLMKAADLEKDWFRYIIGDKIPGIN 276

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
               E Y+ FIAN+R  Q+G+E P  +   NP  W+    D+   K +FFE +  +Y +
Sbjct: 277 PEDMETYISFIANKRAVQLGMEKPYPEIKHNPMKWIRAYEDVNSGKSDFFEQKSRQYAK 335


>gi|153952438|ref|YP_001397460.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. doylei 269.97]
 gi|152939884|gb|ABS44625.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. doylei 269.97]
          Length = 340

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN +  E P L+  E   K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVHKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334


>gi|167648664|ref|YP_001686327.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter sp.
           K31]
 gi|167351094|gb|ABZ73829.1| Ribonucleoside-diphosphate reductase [Caulobacter sp. K31]
          Length = 346

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + +    E   + T E             ++E A+       G + G
Sbjct: 197 IRDESLHCEGIIKLYHAFNAETKCV-TPEVAADIVECCKSVVIMEDAFIDLAFEAGEIQG 255

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     +QY++FIA+ R  Q+ L  ++   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 256 MTPHDIKQYIRFIADWRLRQLHLPEVYGIKENPLPWLQSLLSGVEHANFFEARATEYSKA 315

Query: 120 A 120
           A
Sbjct: 316 A 316


>gi|83859670|ref|ZP_00953190.1| ribonucleotide-diphosphate reductase beta subunit [Oceanicaulis
           alexandrii HTCC2633]
 gi|83852029|gb|EAP89883.1| ribonucleotide-diphosphate reductase beta subunit [Oceanicaulis
           alexandrii HTCC2633]
          Length = 348

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    + + +    E   L TK  +            LE  +       G V G
Sbjct: 197 VRDESLHCEGMMKLFHTFAEETGAL-TKGVKDDIADCCKTVVSLEDKFIELAFEAGEVEG 255

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     + Y+++IA+ R  Q+ L  ++   E+P PW++E+++  +  NFFE R TEY +G
Sbjct: 256 MTPEDIKNYIRYIADWRMKQLKLPTIYGVEEHPIPWLTEILNGVEHANFFEARATEYSKG 315

Query: 120 A 120
           A
Sbjct: 316 A 316


>gi|224372455|ref|YP_002606827.1| ribonucleotide-diphosphate reductase subunit beta [Nautilia
           profundicola AmH]
 gi|223589410|gb|ACM93146.1| ribonucleoside-diphosphate reductase, beta subunit [Nautilia
           profundicola AmH]
          Length = 346

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 3/122 (2%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H     ++  +IK E P L+T E  +  + ML+ A  LE  +         +G++
Sbjct: 219 RDEVTHTLLFANIFKEIKKEFPDLFTPEVIKNIKDMLYAAYELERDWGWYITNDEILGMS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
               +++ Q++AN+R   +GL+ LF     +NP  W        ++K NFFE  V  Y +
Sbjct: 279 KELIDRFTQYLANKRAQAMGLDLLFPEVGLKNPISWFDGFSSFNEQKTNFFEGNVVNYSK 338

Query: 119 GA 120
           G+
Sbjct: 339 GS 340


>gi|224007863|ref|XP_002292891.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971753|gb|EED90087.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 297

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +++  + P       + +   ++  A  +E  +  + +P   +G+N
Sbjct: 172 RDEGLHCDFACLLYSKLVNKLP-------ESRITKIITVAVEIEKEFVSDALPVELIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +     Y++F A+R    +G    +  T NPF WM E+I L+ + NFFE RV EY +  
Sbjct: 225 SKLMCDYIEFCADRLLGALGCSKFYNAT-NPFEWM-EMISLQGKTNFFEKRVGEYAKSG 281


>gi|169613737|ref|XP_001800285.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
 gi|111061216|gb|EAT82336.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
          Length = 409

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + + +        T+  +   + ++ EA  +E  +  E +P   +G+N
Sbjct: 267 RDEGMHTDFACLLFSLLN-------TRPSKDAVKAIITEAVEIEQEFLTEALPCALLGMN 319

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G   ++  T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 320 STLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAG 376


>gi|256027986|ref|ZP_05441820.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
           D11]
          Length = 348

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EIA+    +    +G+ 
Sbjct: 220 RDELSHVVLFRSIVKEIKNDFPNFFSAE---TVYSMFKTAVEQEIAWTEHIIGNRVLGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336

Query: 117 QQGAEL 122
              + +
Sbjct: 337 NMSSSI 342


>gi|289742419|gb|ADD19957.1| ribonucleotide reductase beta subunit [Glossina morsitans
           morsitans]
          Length = 396

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F + +         HL  K  +++   ++ +A  +E  +  E +P   +G+N
Sbjct: 271 RDEGLHCEFAVLMFK-------HLIQKPSKERILEIITDAVKIEKEFLTEALPVDLIGMN 323

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           + S  +Y++++A+R   ++ +   +   ENPF +M++ I +  + NFFE RV EYQ+
Sbjct: 324 SESMCKYIEYVADRLLLELDVGKYY-LAENPFEFMNK-ISIDGKTNFFEKRVGEYQK 378


>gi|260497963|ref|ZP_05816079.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_33]
 gi|260196471|gb|EEW94002.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_33]
          Length = 344

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EIA+    +    +G+ 
Sbjct: 216 RDELSHVVLFRSIVKEIKNDFPNFFSAE---TVYSMFKTAVEQEIAWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAEL 122
              + +
Sbjct: 333 NMSSSI 338


>gi|219126374|ref|XP_002183434.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405190|gb|EEC45134.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 296

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + ++++ + P     E       ++ +A  +E  +  + +P   +G+N
Sbjct: 172 RDEGLHCDFACLLYSKLQNQLPVARIVE-------IITDAVTIEQEFVQDALPVELIGMN 224

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    +Y++F A+R    +G    +K   NPF WM E+I L+ + NFFE RV EY +  
Sbjct: 225 STLMCRYIEFCADRLLVALGCPKHYKAV-NPFDWM-EMISLQGKTNFFEKRVGEYAKSG 281


>gi|57505748|ref|ZP_00371674.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           upsaliensis RM3195]
 gi|57016021|gb|EAL52809.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           upsaliensis RM3195]
          Length = 340

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+ ++   K  +M   A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNEQNIDKIYSMFKRAGELEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ ++   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLIAINLDKIYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334


>gi|20069937|ref|NP_613141.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
 gi|20043331|gb|AAM09166.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
 gi|33331769|gb|AAQ11077.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-A]
          Length = 313

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 8/116 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F           N  +  K   +K   M  EA  +E  +  + +P   +G+N
Sbjct: 191 RDEGMHTDFAC------LYYNTRVKEKLSYEKILDMFKEAVDIEKEFFTDALPVSLLGMN 244

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
           A    +Y++F+A+R   Q+G +P +    NPF +M+  I L+ + NFFE RV EY+
Sbjct: 245 ATMMCEYIEFVADRLLMQLG-QPKYYNARNPFSFMNN-ISLEGKTNFFERRVGEYK 298


>gi|289765931|ref|ZP_06525309.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D11]
 gi|289717486|gb|EFD81498.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D11]
          Length = 344

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EIA+    +    +G+ 
Sbjct: 216 RDELSHVVLFRSIVKEIKNDFPNFFSAE---TVYSMFKTAVEQEIAWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAEL 122
              + +
Sbjct: 333 NMSSSI 338


>gi|88608725|ref|YP_506404.1| ribonucleotide-diphosphate reductase subunit beta [Neorickettsia
           sennetsu str. Miyayama]
 gi|88600894|gb|ABD46362.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
           sennetsu str. Miyayama]
          Length = 322

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 9/130 (6%)

Query: 1   MRDESLHLNFGIDVINQIKIEN---PHLWTKEFQQKSRTMLH-EATLLEIAYAHETMPKG 56
           +RDE+LH N    +     +EN         E ++    M+H E   +++A+    +   
Sbjct: 189 VRDETLHSNSITKLFRTFLLENNIDKFKLEAEIREICNAMVHHEDAFIDLAFEMGDVE-- 246

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
             GL A   ++Y+++IAN R  Q+G   +++   NP  W+  V++  +  NFFE + TEY
Sbjct: 247 --GLKASEVKEYIRYIANLRLKQLGFSEIYEQKVNPLLWLEAVLNTVEHTNFFENKATEY 304

Query: 117 QQGA-ELKWD 125
            + A +  WD
Sbjct: 305 SKAATKGTWD 314


>gi|223996990|ref|XP_002288168.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975276|gb|EED93604.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 335

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +++  + P       + +   ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHCDFACLIYSKLVNQLP-------ESRIEEIITNAVEIEKEFVSDALPVELIGMN 262

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F A+R    +G +  +    NPF WM E+I L+ + NFFE RV EY +  
Sbjct: 263 SKLMCQYIEFCADRLLGALGCKKHYMAV-NPFEWM-EMISLQGKTNFFEKRVGEYAKSG 319


>gi|168049349|ref|XP_001777126.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671569|gb|EDQ58119.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 325

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   +         K  + +   ++ EA  +E  +  E +    VG+N
Sbjct: 197 RDEGLHCDFACLLYTLLN-------NKLSEDRVHEIVCEAVDIEREFVCEALSCDLVGMN 249

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                +Y+ F+A+R    +G    +    NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 250 KIMMSEYIDFVADRLLVSLGYNKRYN-ARNPFDWM-ELISLQGKTNFFEKRVGEYQKAS 306


>gi|257792030|ref|YP_003182636.1| ribonucleotide-diphosphate reductase subunit beta [Eggerthella
           lenta DSM 2243]
 gi|317488666|ref|ZP_07947206.1| ribonucleotide reductase [Eggerthella sp. 1_3_56FAA]
 gi|257475927|gb|ACV56247.1| Ribonucleoside-diphosphate reductase [Eggerthella lenta DSM 2243]
 gi|316912225|gb|EFV33794.1| ribonucleotide reductase [Eggerthella sp. 1_3_56FAA]
          Length = 347

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++K E P L+  E  ++ R M+ E    EI + H  +     GLN
Sbjct: 219 RDENTHLWLFRNILLELKEEEPELFAPELVEEYRAMIKEGCEQEIRWGHYAIGDDVAGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y+Q++ N RC Q+G EPL++  E       W+S+  +    K +FFE R T Y 
Sbjct: 279 KQMVTDYIQYLGNLRCAQLGFEPLYEGHEREPESMSWVSQFSNANMIKTDFFEARSTAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|295401051|ref|ZP_06811025.1| Ribonucleoside-diphosphate reductase [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312112173|ref|YP_003990489.1| ribonucleotide reductase [Geobacillus sp. Y4.1MC1]
 gi|294976844|gb|EFG52448.1| Ribonucleoside-diphosphate reductase [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311217274|gb|ADP75878.1| ribonucleotide reductase [Geobacillus sp. Y4.1MC1]
          Length = 346

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H++    +  ++  E P   T E  +  +    +A  LEI +A+  +     G++
Sbjct: 218 RDEHIHVDLFAKIFKEVLSEYPEYNTPELAEFVQATFTKAAELEIEWANYIIGNDIDGID 277

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118
                 Y++F AN R HQ+G E P   Y  NP  W+   E +DL K  +FFE +  +Y +
Sbjct: 278 MHDLSAYIKFYANVRAHQLGFERPFAGYRTNPLRWIKAYEEVDLGK-SDFFEQKSRQYTK 336


>gi|40556174|ref|NP_955259.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
 gi|40233999|gb|AAR83582.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
          Length = 323

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 8/117 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  Q +   ++  A  +E  +  E +    +G+N
Sbjct: 197 RDEGLHCDFACLLFTN------YLSHKPSQDRVYEIIDSAVSVETEFLTEALSIDLIGMN 250

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           + S  +Y++F+++R    +G    +   ENPF +M E I L+ + NFFE RV+ YQ+
Sbjct: 251 SKSMIEYIKFVSDRLLVSLGFSKKYN-VENPFSFM-ENISLEGKANFFEKRVSNYQK 305


>gi|56555145|gb|AAV98100.1| RR2 protein [Shrimp white spot syndrome virus]
          Length = 328

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 8/111 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   ++ +  ++ P       +++   ++ EA  +E  +   ++P   VG+N
Sbjct: 226 RDEGLHRDFACMLLKKGFVDTPS------RERILEIVTEAVRIEQEFLTVSLPVKLVGMN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 112
                QY++F+A++   ++GLE  +  T NPFP+M   I L+ + NFFE R
Sbjct: 280 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN-ISLENKTNFFEKR 328


>gi|291239432|ref|XP_002739627.1| PREDICTED: hCG23833-like [Saccoglossus kowalevskii]
          Length = 309

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F   +  +IK   P         K R ++ E   +E  +    + K  +G+N
Sbjct: 190 RDEGLHCTFACTMYGKIKPRLP-------DTKVRKIVLEGCEVEKLFVKHALRKPLLGMN 242

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           +   E Y+ F+ +     +G E  F    NPFP+M   I ++ + NFFE RVTEY +
Sbjct: 243 SHLMETYVNFVTDNLLTDLGYEKEFG-VNNPFPFMDN-ISMQGKTNFFERRVTEYTR 297


>gi|15617531|ref|NP_258331.1| RR2B [Spodoptera litura NPV]
 gi|15553267|gb|AAL01745.1|AF325155_57 ribonucleotide reductase small subunit homolog [Spodoptera litura
           NPV]
          Length = 333

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +   H+  K  + +   ++ EA  +E  +  E +P   +G+N
Sbjct: 206 RDEGLHTDFAC-------LMYSHIVNKPTRDRILDIITEAVAIENEFVTEALPVAMLGMN 258

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                +Y++F+A+R   ++  E  +  T+NPF +M+ +I L+ + NFFE +V+EYQ+
Sbjct: 259 NDLMSKYIEFVADRLLLELIGERHYN-TKNPFDFMN-LISLEGKTNFFEKKVSEYQK 313


>gi|269865627|ref|XP_002651990.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063361|gb|EED42066.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 290

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H +          ++ EA  +E  +  E++P   +G+N
Sbjct: 168 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 218

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R T YQ+G
Sbjct: 219 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERRETNYQKG 274


>gi|119478853|ref|XP_001259462.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
           fischeri NRRL 181]
 gi|119407616|gb|EAW17565.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
           fischeri NRRL 181]
          Length = 405

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  +  E +P   +G+N
Sbjct: 268 RDEGLHTDFACLLFS-------HLNHRPDKKVVEDIIVEAVAIEQEFLTEALPVALLGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  + NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYN-SSNPFDFM-ESISLAGKTNFFEKRVGDYQKAG 377


>gi|315637824|ref|ZP_07893014.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           upsaliensis JV21]
 gi|315482065|gb|EFU72679.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           upsaliensis JV21]
          Length = 340

 Score = 59.3 bits (142), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+ ++   K  +M   A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNEQNIDKIYSMFKRAGELEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ ++   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLIAINLDRIYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334


>gi|268678691|ref|YP_003303122.1| ribonucleoside-diphosphate reductase [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268616722|gb|ACZ11087.1| Ribonucleoside-diphosphate reductase [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 340

 Score = 59.3 bits (142), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN  K E P L+T   + K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINTTKKERPDLFTDALKAKVYEMFQKAGDLEIEWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E Y+ ++ + R   +G + L+    +P  W+ +      +K NFFE  V+ Y +G+
Sbjct: 276 DDIIETYIHYLVDDRLTAVGFDKLYN-ASHPIKWVDDFSKFNDQKTNFFEGNVSNYSKGS 334


>gi|51869996|ref|YP_073549.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate
           China]
 gi|51858204|gb|AAU10888.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate
           China]
          Length = 374

 Score = 59.3 bits (142), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET-MPKGFVG 59
           +RDE++H+     +   I  E P + TK+F +   T+  E   LE A+     +      
Sbjct: 250 IRDENVHVEGLCKLFKTIVSEYPFILTKDFYKAVETLQQEVLKLETAFVDLVFIEDKLKN 309

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           L       Y+++I  RR  Q+GL       +NP  W+S +I  +   NFFE RVTEY  G
Sbjct: 310 LKRVDVINYVKYILQRRTVQLGLSNKTD-LQNPILWVSWLISGRDVTNFFENRVTEYDVG 368

Query: 120 A 120
            
Sbjct: 369 G 369


>gi|42525851|ref|NP_970949.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           denticola ATCC 35405]
 gi|41815901|gb|AAS10830.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           denticola ATCC 35405]
          Length = 351

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T +  +  R M+ E    EIA+    +     GLN
Sbjct: 223 RDENTHLWLFRSMIQELQKEEPQLFTPQNVELFRAMIKEGCEQEIAWGDYVIGNDIPGLN 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
           +     Y+Q++ N RC  +G  P++  + E P    W S+  +    K +FFE + T Y 
Sbjct: 283 SQMITDYIQYLGNLRCENLGFAPIYDGHREEPQSMSWASQYSNANLIKTDFFEAKSTAYA 342

Query: 118 QGAEL 122
           + + +
Sbjct: 343 KSSAM 347


>gi|253582918|ref|ZP_04860136.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           varium ATCC 27725]
 gi|251835124|gb|EES63667.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           varium ATCC 27725]
          Length = 348

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +I+ ENP  +  E   +   M  +A   EI + +  +    +G+ 
Sbjct: 220 RDELSHVVIFQHLLKEIRNENPDFFNDE---EIYDMFRKAVEQEINWTNHIIGNQILGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
             + EQY +++AN R   IGL+P++  + +NP+  +++  D + E     NFFE  VT Y
Sbjct: 277 EETTEQYTKWLANERLRSIGLKPIYDGFNKNPYKHLTKFADTEGEGNVKANFFEGTVTSY 336

Query: 117 QQGAELK-WD 125
              + +  WD
Sbjct: 337 NMSSSIDGWD 346


>gi|297736972|emb|CBI26173.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 9/105 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + + ++ + P  W     QK   ++HEA  +E  +  E +P   +G+N
Sbjct: 171 RDEGLHCDFACLLYSLLQKQLP--W-----QKVHHIVHEAVEIETQFVCEALPCALIGMN 223

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 106
           A    QY++F+A+R    +G E  +   ENPF WM E I L+  +
Sbjct: 224 ATLMSQYIKFVADRLLVALGYERKYN-VENPFDWM-EFISLQCSR 266


>gi|290343623|ref|YP_003494990.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1]
 gi|260161038|emb|CAY39739.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1]
          Length = 389

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F +++   ++   P + T         ++ EA  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHQEFAVELFKTLR-NRPGVDT------IHAIVREAVDIEKGFILDALPCNLIGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           +    +Y++++++R   QIG+ P    ++NPF +M E I L  + NFFE RV +Y +
Sbjct: 321 SEKMSEYIEYVSDRLLKQIGV-PTIWNSKNPFDFM-ENISLDGKTNFFEKRVGDYGK 375


>gi|257458932|ref|ZP_05624052.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           gracilis RM3268]
 gi|257443636|gb|EEV18759.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           gracilis RM3268]
          Length = 340

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+ K    K   M   A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERADLFNKRNVDKIYEMFETAGNLEIDWGKYITDNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   IGLE  +   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLLAIGLEKRYD-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334


>gi|163955147|ref|YP_001648251.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
 gi|163638596|gb|ABY27955.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
          Length = 322

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F +++   ++   P + T         ++ EA  +E  +  + +P   +G+N
Sbjct: 201 RDEGLHQEFAVELFKTLR-NRPGVDT------IHAIVREAVEIEKGFILDALPCNLIGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           +    +Y++++++R   QIG+ P    ++NPF +M E I L  + NFFE RV +Y +
Sbjct: 254 SEKMSEYIEYVSDRLLKQIGV-PTIWNSKNPFDFM-ENISLDGKTNFFEKRVGDYGK 308


>gi|327298815|ref|XP_003234101.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
           CBS 118892]
 gi|326464279|gb|EGD89732.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
           CBS 118892]
          Length = 408

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFLTDALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 381


>gi|155122339|gb|ABT14207.1| hypothetical protein MT325_M653L [Paramecium bursaria chlorella
           virus MT325]
          Length = 326

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  FG  + +  K+EN     K    + + ++ EA   E  +  E +P   +G+N
Sbjct: 202 RDEGLHQQFGELLYS--KLEN-----KLSLAQVKAIVEEAVANEKEFICEAIPCRMIGMN 254

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           +    QY++F+A+R    +G    +  T NPF +M E+I L+ + NFFE RV+EYQ+
Sbjct: 255 SELMGQYLEFVADRIFVALGHPKQYNAT-NPFDFM-ELISLEGKSNFFERRVSEYQR 309


>gi|155370749|ref|YP_001426283.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
           virus FR483]
 gi|155124069|gb|ABT15936.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
           virus FR483]
          Length = 348

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  FG  + +  K+EN     K    + + ++ EA   E  +  E +P   +G+N
Sbjct: 224 RDEGLHQQFGELLYS--KLEN-----KLSLAQVKAIVEEAVANEKEFICEAIPCRMIGMN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           +    QY++F+A+R    +G    +  T NPF +M E+I L+ + NFFE RV+EYQ+
Sbjct: 277 SELMGQYLEFVADRIFVALGHPKQYNAT-NPFDFM-ELISLEGKSNFFERRVSEYQR 331


>gi|302497417|ref|XP_003010709.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
 gi|291174252|gb|EFE30069.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
          Length = 408

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFLTDALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 381


>gi|225386408|ref|ZP_03756172.1| hypothetical protein CLOSTASPAR_00155 [Clostridium asparagiforme
           DSM 15981]
 gi|225047489|gb|EEG57735.1| hypothetical protein CLOSTASPAR_00155 [Clostridium asparagiforme
           DSM 15981]
          Length = 347

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L++ E  +  + M+ E    EIA+ H  +     GL 
Sbjct: 219 RDENTHLWLLRNMILELKKEEPQLFSPETVEMLKAMVEEGVEQEIAWGHYVIGDRISGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                +Y++++ N R   +G EPL++ Y E P    W+ +  +    K +FFE + T Y 
Sbjct: 279 REMVTEYIRYLGNLRWTSLGFEPLYEGYEEEPESMKWVGQYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAEL 122
           +   L
Sbjct: 339 KSTAL 343


>gi|326472581|gb|EGD96590.1| ribonucleotide reductase small subunit RnrA [Trichophyton tonsurans
           CBS 112818]
          Length = 408

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPNAVEAIITEAVTIEQEFLTDALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 381


>gi|302381236|ref|YP_003817059.1| ribonucleoside-diphosphate reductase [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302191864|gb|ADK99435.1| Ribonucleoside-diphosphate reductase [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 348

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH +  I + +    E   + TK               LE  +       G + G
Sbjct: 200 VRDESLHCDGIIKLYHAFNKETGVV-TKAVADDIVQCCETVVGLEDKFIDLAFEAGEING 258

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     +QY++FIA+ R  Q+ L  L+   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 259 MTPEDIKQYIRFIADWRLRQLKLPELYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 318

Query: 120 A 120
           A
Sbjct: 319 A 319


>gi|282598964|ref|YP_003358881.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Deftia phage phiW-14]
 gi|257219034|gb|ACV50049.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Deftia phage phiW-14]
          Length = 346

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 7/131 (5%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           +RDE +H+     +  ++  E+P L T E +++   +       E  +      K  + +
Sbjct: 205 LRDEGIHVEGSSLLYRKVMGEHPWLMTDEHKKQVYDLARAVVAAEDLFLDLAFKKYQLTM 264

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---DLKKEKNFFETRVTEYQ 117
                + Y++++ NRR  Q+G + +F+    P PW+ E++     K++ NFFETRV  YQ
Sbjct: 265 TKDESKAYVRYMMNRRLLQLGHKAIFEVQGIPCPWIEEILGGAGGKRDSNFFETRVDNYQ 324

Query: 118 -QGA---ELKW 124
             GA   EL W
Sbjct: 325 ASGALVGELDW 335


>gi|168031987|ref|XP_001768501.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680214|gb|EDQ66652.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 331

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F         +    L  K  +++   ++ EA  +E  +  E +    VG+N
Sbjct: 201 RDEGLHCDFAC-------LLYTLLINKLSEERVYEIVCEAVEIEREFVCEALSCDLVGMN 253

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                +Y+ F+A+R    +G     KY   NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 254 KILMSEYIDFVADRLLVSLGYRK--KYNALNPFDWM-ELISLQGKTNFFEKRVGEYQKAS 310


>gi|237738278|ref|ZP_04568759.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           mortiferum ATCC 9817]
 gi|229420158|gb|EEO35205.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           mortiferum ATCC 9817]
          Length = 348

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 9/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +++ ENP+ + +    +   M  +A   EI++ +  +    +G+ 
Sbjct: 220 RDELSHVVIFQQMIKEVQNENPNFFDENIIYE---MFEKAVEQEISWTNHIIGGNILGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
             + E Y +++AN R   IGL+PL++ Y +NP+  +    D + E     NFFE  VT Y
Sbjct: 277 EKTTESYTKWLANERLKSIGLQPLYEGYEKNPYKHLERFADTEGEGNVKANFFEGTVTSY 336

Query: 117 QQGAELK-WD 125
              + ++ WD
Sbjct: 337 NMSSSVEGWD 346


>gi|119174781|ref|XP_001239725.1| hypothetical protein CIMG_09346 [Coccidioides immitis RS]
          Length = 408

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +  + ++ EA  +E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLRHRPGPEAVQAIITEAVEIEKEFLTDALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 325 SKLMCQYIEFVADRLLVALGNKKFYNAT-NPFDFMDN-ISLSGKTNFFEKRVGDYQKAG 381


>gi|315041979|ref|XP_003170366.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
           gypseum CBS 118893]
 gi|311345400|gb|EFR04603.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
           gypseum CBS 118893]
          Length = 408

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNHRPEPSAVEAIITEAVTIEQEFLTDALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 381


>gi|302665732|ref|XP_003024474.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
 gi|291188529|gb|EFE43863.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
          Length = 529

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 393 RDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFLTDALPCALLGMN 445

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 446 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 502


>gi|303314521|ref|XP_003067269.1| ribonucleoside-diphosphate reductase small chain, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240106937|gb|EER25124.1| ribonucleoside-diphosphate reductase small chain, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|320037571|gb|EFW19508.1| ribonucleoside-diphosphate reductase small subunit [Coccidioides
           posadasii str. Silveira]
          Length = 408

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +  + ++ EA  +E  +  + +P   +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLRHRPGPEAVQAIITEAVEIEKEFLTDALPCALLGMN 324

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 325 SKLMCQYIEFVADRLLVALGNKKFYNAT-NPFDFMDN-ISLSGKTNFFEKRVGDYQKAG 381


>gi|70997335|ref|XP_753417.1| ribonucleotide reductase small subunit RnrA [Aspergillus fumigatus
           Af293]
 gi|66851053|gb|EAL91379.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           fumigatus Af293]
 gi|159126856|gb|EDP51972.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           fumigatus A1163]
          Length = 405

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHTDFACLLFS-------HLNHRPDKKVIEDIIVEAVAIEQEFLTDALPVALLGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  F  + NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYFN-SPNPFDFM-ESISLAGKTNFFEKRVGDYQKAG 377


>gi|167748341|ref|ZP_02420468.1| hypothetical protein ANACAC_03085 [Anaerostipes caccae DSM 14662]
 gi|167652333|gb|EDR96462.1| hypothetical protein ANACAC_03085 [Anaerostipes caccae DSM 14662]
          Length = 358

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++K E P L+  +     R M+ +    EI + H  +     GL 
Sbjct: 230 RDENTHLWLFKNILLELKKEEPSLFHPDCINDYRRMIKKGCEQEIRWGHYVIGDEIQGLK 289

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E+Y++++ N RC  +G EP++  +E       W+S+  +    K +FFE + T Y 
Sbjct: 290 KEMVEEYIRYLGNLRCQNLGFEPIYPGSETEPESMSWVSQFSNANMIKTDFFEAKSTAYA 349

Query: 118 QGAEL 122
           + + L
Sbjct: 350 KSSAL 354


>gi|317472120|ref|ZP_07931452.1| ribonucleotide reductase [Anaerostipes sp. 3_2_56FAA]
 gi|316900524|gb|EFV22506.1| ribonucleotide reductase [Anaerostipes sp. 3_2_56FAA]
          Length = 347

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++ ++K E P L+  +     R M+ +    EI + H  +     GL 
Sbjct: 219 RDENTHLWLFKNILLELKKEEPSLFHPDCINDYRRMIKKGCEQEIRWGHYVIGDEIQGLK 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E+Y++++ N RC  +G EP++  +E       W+S+  +    K +FFE + T Y 
Sbjct: 279 KEMVEEYIRYLGNLRCQNLGFEPIYPGSETEPESMSWVSQFSNANMIKTDFFEAKSTAYA 338

Query: 118 QGAEL 122
           + + L
Sbjct: 339 KSSAL 343


>gi|332031690|gb|EGI71130.1| Ribonucleoside-diphosphate reductase subunit M2 [Acromyrmex
           echinatior]
          Length = 210

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 67/124 (54%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +   I ++ P        ++ ++++ +A  +E  +  + +P   +G+N
Sbjct: 81  RDEGLHCDFACLMFKHI-VQKPSF------ERVKSIVMDAVEIEKEFLTQALPVELIGMN 133

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
                 Y++F+A+R    +G E ++  +ENPF +M + I +  + NFFE +V EY++   
Sbjct: 134 RTFMCNYIEFVADRLFVALGFEKVYN-SENPFSFM-DFISMMGKTNFFEKKVGEYKKFGV 191

Query: 122 LKWD 125
           ++ D
Sbjct: 192 MEED 195


>gi|57168357|ref|ZP_00367491.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           coli RM2228]
 gi|305432773|ref|ZP_07401932.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           coli JV20]
 gi|57020165|gb|EAL56839.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           coli RM2228]
 gi|304444170|gb|EFM36824.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           coli JV20]
          Length = 340

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E P L+ +    K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNENNINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ ++   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLVAINLDKIYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334


>gi|330941351|gb|EGH44203.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 317

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/26 (92%), Positives = 26/26 (100%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLW 26
           +RDES+HLNFGIDVINQIKIENPHLW
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLW 316


>gi|121713826|ref|XP_001274524.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           clavatus NRRL 1]
 gi|119402677|gb|EAW13098.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           clavatus NRRL 1]
          Length = 405

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHTDFACLLFS-------HLNNRPDKKVVEDIIVEAVAIEQEFLTDALPVALLGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  + NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYN-SPNPFDFM-ESISLAGKTNFFEKRVGDYQKAG 377


>gi|212533263|ref|XP_002146788.1| ribonucleotide reductase small subunit RnrA, putative [Penicillium
           marneffei ATCC 18224]
 gi|210072152|gb|EEA26241.1| ribonucleotide reductase small subunit RnrA, putative [Penicillium
           marneffei ATCC 18224]
          Length = 406

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL T+   +    ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHTDFACMLFS-------HLNTRPNPKVIEDIIVDAVAIEQEFLTDALPCALLGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYNAT-NPFDFM-ENISLAGKTNFFEKRVGDYQKAG 377


>gi|169779219|ref|XP_001824074.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           oryzae RIB40]
 gi|238499845|ref|XP_002381157.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           flavus NRRL3357]
 gi|83772813|dbj|BAE62941.1| unnamed protein product [Aspergillus oryzae]
 gi|220692910|gb|EED49256.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           flavus NRRL3357]
          Length = 405

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   Q    ++ EA  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHTDFACLLFS-------HLNNRPDPQIVEDVIVEAVSIEKEFLTDALPCALLGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G    F  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 322 SNLMCQYIEFVADRLLVALGNNKYFNAT-NPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 378


>gi|296809816|ref|XP_002845246.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
 gi|238842634|gb|EEQ32296.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
          Length = 405

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 269 RDEGLHTDFACLLFS-------HLNYRPDPTAVEAIITEAVSIEQEFLTDALPCALLGMN 321

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 322 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 378


>gi|294659365|ref|XP_461732.2| DEHA2G04268p [Debaryomyces hansenii CBS767]
 gi|199433907|emb|CAG90185.2| DEHA2G04268p [Debaryomyces hansenii]
          Length = 426

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 297 RDEGLHTDFACLLFS-------HLQNRPDAVIVERIITEAVTIEKEFFVDALPISLLGMN 349

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 350 CNLMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 406


>gi|254303614|ref|ZP_04970972.1| ribonucleoside-diphosphate reductase [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
 gi|148323806|gb|EDK89056.1| ribonucleoside-diphosphate reductase [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
          Length = 344

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EIA+    +    +G+ 
Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEIAWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAEL 122
              + +
Sbjct: 333 NMSSSI 338


>gi|225712968|gb|ACO12330.1| Ribonucleoside-diphosphate reductase small chain [Lepeophtheirus
           salmonis]
          Length = 335

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H +F         +   HL  K   +    ++ E   +E  +  +++P G +G+N
Sbjct: 209 RDEGSHTDFAC-------LLYSHLENKLDPKYVLQIIKEGVEIEKEFVADSLPVGLIGMN 261

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           A   + Y++F+A+     + +E  + +T+NPF +M   I +  + NFF+ RV+EYQ+
Sbjct: 262 AKMMKNYIEFVADNLLENLNIEKYY-HTKNPFNFMDN-ISMTGKTNFFDKRVSEYQR 316


>gi|158430770|pdb|2RCC|A Chain A, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
 gi|158430771|pdb|2RCC|B Chain B, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
 gi|158430772|pdb|2RCC|C Chain C, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
          Length = 346

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH+    ++  ++ +E P L T+E +   +T L +A  LE  +    +     G+N
Sbjct: 218 RDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLXKAADLEKDWFRYIIGDKIPGIN 277

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
               E Y+ FIAN+R  Q+G E P  +   NP  W+    D+   K +FFE +  +Y +
Sbjct: 278 PEDXETYISFIANKRAVQLGXEKPYPEIKHNPXKWIRAYEDVNSGKSDFFEQKSRQYAK 336


>gi|18640273|ref|NP_570429.1| CMLV039 [Camelpox virus]
 gi|18482949|gb|AAL73746.1|AF438165_36 ribonucleotide reductase small subunit [Camelpox virus M-96]
 gi|19717972|gb|AAG37497.1| CMP39L [Camelpox virus CMS]
          Length = 319

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL     ++   +++ +A  +E  +    +P   +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVISIITDAVSIEQEFLTVALPVKLIGMN 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
               + Y++F+A+R   ++G + ++    NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVI-NPFDFM-ENISLEGKTNFFEKRVGEYQK 302


>gi|269864962|ref|XP_002651756.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|269866721|ref|XP_002652369.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062645|gb|EED41686.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063933|gb|EED42300.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 135

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H +          ++ EA  +E  +  E++P   +G+N
Sbjct: 13  RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 63

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 64  CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 119


>gi|306819883|ref|ZP_07453537.1| ribonucleotide-diphosphate reductase beta subunit [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
 gi|304552130|gb|EFM40067.1| ribonucleotide-diphosphate reductase beta subunit [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
          Length = 347

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     ++ ++K E  H++T+E     R M+ +    EI +A   +     GL+
Sbjct: 219 RDENTHLWLFRSILLELKKEEAHIFTQENINLFRNMIKQGVEEEIRWAKYAIGDNIQGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N RC  +G + +++ Y + P    W+SE  D    K +FFE +V+ Y 
Sbjct: 279 MSMIEDYLKYLGNLRCKGLGFDNIYEGYEKEPESMSWVSEYSDPNAIKTDFFEAKVSAYA 338

Query: 118 QGAELKWD 125
           +   ++ D
Sbjct: 339 KSTVIEDD 346


>gi|325294459|ref|YP_004280973.1| ribonucleotide reductase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325064907|gb|ADY72914.1| ribonucleotide reductase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 352

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)

Query: 31  QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
           + K   M   A   E  ++ + +    +G+N  S E+Y  ++AN+R   +GL+P+F  T 
Sbjct: 251 KDKIYEMFKVAVNQEQRFSKKVIGNKILGMNEKSIEEYTYYVANKRLKALGLDPIFPDTP 310

Query: 91  NPFPWMSEVIDLKKE----KNFFETRVTEYQQGAELK-WD 125
           NP+  +  + D   E     NFFE  VT Y Q + ++ WD
Sbjct: 311 NPYEHLERIADTGGEGNVKANFFEATVTSYNQASAVEGWD 350


>gi|241951880|ref|XP_002418662.1| ribonucleoside diphosphate reductase, putative [Candida
           dubliniensis CD36]
 gi|223642001|emb|CAX43965.1| ribonucleoside diphosphate reductase, putative [Candida
           dubliniensis CD36]
          Length = 394

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 11/120 (9%)

Query: 2   RDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE +H ++   + + +K + +P +  K        ++ EA  +E  Y  + +P   +G+
Sbjct: 266 RDEGIHTDYACLLFSYLKNKPSPEIIEK--------IITEAVTIEKKYFSDALPVSLLGM 317

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           N     QY++F+A+R     G +  +  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 318 NCDLMCQYVEFVADRLLVAFGNKKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 375


>gi|320580024|gb|EFW94247.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia angusta DL-1]
          Length = 408

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL           ++ EA  +E  Y  + +P   +G+N
Sbjct: 277 RDEGLHTDFACLLFS-------HLNNTPNNDIVLKIITEAVDIEKRYFTDALPVNLLGMN 329

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G +  +  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 330 CSLMCQYVEFVADRLLLSLGCKKHYNAT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 386


>gi|255658865|ref|ZP_05404274.1| ribonucleoside-diphosphate reductase, beta subunit [Mitsuokella
           multacida DSM 20544]
 gi|260849270|gb|EEX69277.1| ribonucleoside-diphosphate reductase, beta subunit [Mitsuokella
           multacida DSM 20544]
          Length = 347

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    +++  ++ E P L+T E ++  R M+ E    EIA+    +     GLN
Sbjct: 219 RDENTHLWLFRNILRDLRAEEPDLFTPEREEMMREMIREGVRQEIAWGKYAIGNEVEGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y+ ++ N R   IGL  L++ + E P    W+S+  +    K +F E R T Y 
Sbjct: 279 EKMIEDYVHYLGNARAESIGLGTLYEGFEEEPSSMRWVSQYANPNFIKTDFIEGRSTAYA 338

Query: 118 QGAEL 122
           +   L
Sbjct: 339 KSTAL 343


>gi|70921511|ref|XP_734071.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56506464|emb|CAH78308.1| hypothetical protein PC000956.02.0 [Plasmodium chabaudi chabaudi]
          Length = 87

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 45/69 (65%), Gaps = 2/69 (2%)

Query: 52  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 111
           ++P   +G+N+    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE 
Sbjct: 5   SLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVF-HSKNPFSWM-DLISLQGKTNFFEK 62

Query: 112 RVTEYQQGA 120
           RV +YQ+  
Sbjct: 63  RVADYQKSG 71


>gi|288800286|ref|ZP_06405744.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 299 str. F0039]
 gi|288332499|gb|EFC70979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 299 str. F0039]
          Length = 347

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +       M+ E    EIA+    +     GLN
Sbjct: 219 RDENTHLWLFRNIIQELKKEEPDLFTPDKVAVYEAMMREGVEQEIAWGQYVIGNDIQGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENP---FPWMSEVIDLKKEK-NFFETRVTEYQ 117
           A   + Y++++ N R H +G + L++          W+S+  +    K +FFE + T Y 
Sbjct: 279 AQMVDDYIRYLGNLRWHSLGFDYLYEDNRTEPENMRWVSQYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAELKWD 125
           +   L+ D
Sbjct: 339 KSTALEDD 346


>gi|269866693|ref|XP_002652360.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062665|gb|EED41696.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 211

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H +          ++ EA  +E  +  E++P   +G+N
Sbjct: 89  RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 139

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 140 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 195


>gi|74025552|ref|XP_829342.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834728|gb|EAN80230.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
          Length = 337

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 65/119 (54%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      ++  K  + +   ++  A L+E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVLIEREFICDALPVRLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  ++NPF +M ++I L+ + NFFE +V EYQ+  
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFFEKKVGEYQKAG 320


>gi|71648907|ref|XP_813233.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
           strain CL Brener]
 gi|70878098|gb|EAN91382.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F       +  EN ++  K  +++ R ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFAC-----LLYEN-YIVNKLPKERIREIICSAVDIEREFICDAIPVRLLGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A     Y++F+A+R    +G E  +  ++NPF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 264 ADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFFEKKVGEYQKAG 320


>gi|269864946|ref|XP_002651751.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|269865852|ref|XP_002652068.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|269866233|ref|XP_002652201.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062966|gb|EED41855.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063214|gb|EED41988.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063944|gb|EED42305.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 226

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H +          ++ EA  +E  +  E++P   +G+N
Sbjct: 104 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 154

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 155 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 210


>gi|269864629|ref|XP_002651641.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220064151|gb|EED42415.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 277

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H +          ++ EA  +E  +  E++P   +G+N
Sbjct: 155 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 205

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 206 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 261


>gi|167957419|ref|ZP_02544493.1| ribonucleotide-diphosphate reductase subunit beta [candidate
           division TM7 single-cell isolate TM7c]
          Length = 277

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 40/66 (60%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+LHL FGI+++  I  ENP L   EF  + R ++ +A  LE AY  + +P G +GLN
Sbjct: 212 RDENLHLEFGINLLLTILHENPDLQDPEFADEIRNLILQAVELEEAYNRDMLPNGILGLN 271

Query: 62  APSCEQ 67
           A    Q
Sbjct: 272 ADYVNQ 277


>gi|154505112|ref|ZP_02041850.1| hypothetical protein RUMGNA_02625 [Ruminococcus gnavus ATCC 29149]
 gi|153794591|gb|EDN77011.1| hypothetical protein RUMGNA_02625 [Ruminococcus gnavus ATCC 29149]
          Length = 347

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T E  +  + ML E    EIA+ H  +     GL 
Sbjct: 219 RDENTHLWLFRNMILEMKKELPELFTPEHIEILKEMLKEGVRQEIAWGHYVIGNQIAGLT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                +Y+Q++ N R   +G +P++   T+ P    W+S+  +    K +FFE + T Y 
Sbjct: 279 KEMITEYIQYLGNLRFTNLGFDPIYPDQTQEPDSMRWVSQYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAEL 122
           +   L
Sbjct: 339 KSTAL 343


>gi|269865524|ref|XP_002651954.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063427|gb|EED42101.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 205

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H +          ++ EA  +E  +  E++P   +G+N
Sbjct: 83  RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 133

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 134 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 189


>gi|320585888|gb|EFW98567.1| ribonucleotide reductase small subunit [Grosmannia clavigera
           kw1407]
          Length = 378

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 9/114 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  +Q    ++ +A  +E  +  E +P   +G+N
Sbjct: 256 RDEGLHTDFACLLFS-------HLKNRPSKQLIEEIIVDAVKIEQEFLTEALPCALLGMN 308

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
           +   +QY++F+A+R    +G + ++  T NPF +M E I L  + NFFE RV E
Sbjct: 309 STLMKQYIEFVADRLLVALGNDKVYNST-NPFDFM-ENISLGGKTNFFEKRVPE 360


>gi|157325080|ref|YP_001468505.1| gp125 [Listeria phage A511]
 gi|66732769|gb|AAY53360.1| gp57 [Listeria phage P100]
 gi|66733088|gb|AAY52906.1| gp125 [Listeria phage A511]
          Length = 343

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  ENP L T E           A  LE A++ E + +G  G++
Sbjct: 215 RDELAHSKFISELIRAIVGENPELQTDELNDYVYASFRHAVELEQAWSSEVL-QGIEGID 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                 Y+++ AN+    +GL+P+++ +TEN   W+    D   + + +FFE R + Y++
Sbjct: 274 VEEMLDYVKYRANKMLGMLGLQPMYQGHTENSMTWIKAYADNFTETKTDFFEMRNSSYKK 333


>gi|320527966|ref|ZP_08029132.1| ribonucleoside-diphosphate reductase, beta subunit [Solobacterium
           moorei F0204]
 gi|320131592|gb|EFW24156.1| ribonucleoside-diphosphate reductase, beta subunit [Solobacterium
           moorei F0204]
          Length = 349

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDES HL    +++ +++ E P L+T E  Q  R M++     EIA+ H  +     GLN
Sbjct: 221 RDESTHLWLFRNILVELQKEEPELFTPENIQMIREMMNTGVEQEIAWGHYVIGDEIPGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N R   +G   L+ +Y E P    W+ +  D    K +FFE R + Y 
Sbjct: 281 KQMVTDYIKYLGNTRFATLGFGNLYEEYAEEPESMKWVKQYSDANMVKTDFFEARPSAYA 340

Query: 118 QGAELKWD 125
           +   ++ D
Sbjct: 341 KSGAIEDD 348


>gi|146418573|ref|XP_001485252.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146390725|gb|EDK38883.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 418

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 286 RDEGLHTDFACLLFS-------HLQNRPDPEIVEKIITEAVDIEKEFFTDALPISLLGMN 338

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R    +G + ++    NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 339 CKLMCQYVEFVADRLLVALGNKKIYNVA-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 395


>gi|19113338|ref|NP_596546.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
           pombe 972h-]
 gi|9297110|sp|P36603|RIR2_SCHPO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3378511|emb|CAA20100.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
           pombe]
          Length = 391

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 9/116 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++    ++ EA  +E  Y  + +P   +G+N
Sbjct: 261 RDEGLHTDFACLMFS-------HLKHRPGRKVVEAIIVEAVDIEKEYFTDALPVSLLGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                QY++F+A+R    +G +  +  T NPF +M E I L  + NFFE +V++YQ
Sbjct: 314 KDLMCQYIEFVADRLLVALGNDKYYNVT-NPFDFM-ENISLAGKTNFFEKKVSDYQ 367


>gi|322817571|gb|EFZ25271.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F       +  EN ++  K   ++ R ++  A  +E  +  +++P   +G+N
Sbjct: 210 RDEGLHTDFAC-----LLYEN-YIVNKLPTERIREIICSAVDIEREFICDSIPVRLLGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A     Y++F+A+R    +G E  +  ++NPF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 264 ADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFFEKKVGEYQKAG 320


>gi|269865926|ref|XP_002652096.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063168|gb|EED41960.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 330

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H +          ++ EA  +E  +  E++P   +G+N
Sbjct: 219 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 270 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 325


>gi|71416121|ref|XP_810103.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
           strain CL Brener]
 gi|70874586|gb|EAN88252.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F       +  EN ++  K   ++ R ++  A  +E  +  +++P   +G+N
Sbjct: 210 RDEGLHTDFAC-----LLYEN-YIVNKLPTERIREIICSAVDIEREFICDSIPVRLLGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           A     Y++F+A+R    +G E  +  ++NPF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 264 ADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFFEKKVGEYQKAG 320


>gi|269863618|ref|XP_002651286.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220064807|gb|EED42770.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 332

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H +          ++ EA  +E  +  E++P   +G+N
Sbjct: 219 RDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMN 269

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                QY++F+A+R    +G + ++  + NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 270 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 325


>gi|210631890|ref|ZP_03297102.1| hypothetical protein COLSTE_00992 [Collinsella stercoris DSM 13279]
 gi|210159815|gb|EEA90786.1| hypothetical protein COLSTE_00992 [Collinsella stercoris DSM 13279]
          Length = 352

 Score = 57.8 bits (138), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I +++ E P L+T E  +  R ML E    EIA+    +     GL 
Sbjct: 224 RDENTHLWLFRNIILELQKEEPQLFTSENVEMLRQMLEEGVRQEIAWGRYVLGDAIPGLT 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +G   L++ Y   P    W+S+  +    K +FFE + T Y 
Sbjct: 284 GDMVEGYIKYLGNLRWSSLGFGQLYEGYRSEPEDMAWVSQYSNANMVKTDFFEAKSTAYA 343

Query: 118 QGAEL 122
           +   L
Sbjct: 344 KSTAL 348


>gi|56692684|ref|YP_164142.1| ribonucleoside-diphosphate reductase beta subunit [Singapore
           grouper iridovirus]
 gi|42517396|gb|AAS18062.1| ribonucleoside-diphosphate reductase beta subunit [Singapore
           grouper iridovirus]
          Length = 384

 Score = 57.8 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 6/125 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY---AHETMPKGF 57
           +RDE++H+     +   +  E P L T++  +  +     A  LE A+   A    P   
Sbjct: 253 VRDENIHVEGVSRLFETLCAEYPWLMTEKLVRDCKKDAERAAELEFAFIDLAFSYCP-AL 311

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNFFETRVTE 115
            GL   S + Y+ ++ N R   +GL  L     +ENP PW+  +I+     NFFE  VTE
Sbjct: 312 DGLTPSSVKNYVLYVINLRASHMGLPKLMASAPSENPLPWVKWLIEGADLTNFFENHVTE 371

Query: 116 YQQGA 120
           Y+ G 
Sbjct: 372 YETGG 376


>gi|56418235|gb|AAV91049.1| ribonucleotide reductase beta subunit [Grouper iridovirus]
          Length = 384

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 6/125 (4%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY---AHETMPKGF 57
           +RDE++H+     +   +  E P L T++  +  +     A  LE A+   A    P   
Sbjct: 253 VRDENIHVEGVSRLFETLCAEYPWLMTEKLVRDCKKDAERAAELEFAFIDLAFSYCP-AL 311

Query: 58  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNFFETRVTE 115
            GL   S + Y+ ++ N R   +GL  L     +ENP PW+  +I+     NFFE  VTE
Sbjct: 312 DGLTPSSVKNYVLYVINLRASHMGLPKLMASAPSENPLPWVKWLIEGADLTNFFENHVTE 371

Query: 116 YQQGA 120
           Y+ G 
Sbjct: 372 YETGG 376


>gi|297449|emb|CAA46231.1| ribonucleotide reductase, small subunit [Schizosaccharomyces pombe]
 gi|447147|prf||1913428B ribonucleotide reductase:SUBUNIT=small
          Length = 391

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 9/116 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +  ++  + ++ EA  +E  Y  + +P   +G+N
Sbjct: 261 RDEGLHTDFACLMFS-------HLKHRPGRKLLKPIIVEAVDIEKEYFTDALPVSLLGMN 313

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                QY++F+A+R    +G +  +  T NPF +M E I L  + NFFE +V++YQ
Sbjct: 314 KDLMCQYIEFVADRLLVALGNDKYYNVT-NPFDFM-ENISLAGKTNFFEKKVSDYQ 367


>gi|315497476|ref|YP_004086280.1| ribonucleoside-diphosphate reductase [Asticcacaulis excentricus CB
           48]
 gi|315415488|gb|ADU12129.1| Ribonucleoside-diphosphate reductase [Asticcacaulis excentricus CB
           48]
          Length = 350

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + +    E   + TK               LE  +   +   G V G
Sbjct: 200 VRDESLHCEGIIKLYHAFNKETGAV-TKAVADDIVDCCKTVVSLEDKFIDLSFEMGPVEG 258

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     +QY+++IA+ R  Q+ L  +F   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 259 MTPDDIKQYIRYIADWRLRQLELPEVFGVQENPLPWLQVLLSGVEHANFFEARATEYSKA 318

Query: 120 A 120
           A
Sbjct: 319 A 319


>gi|149182583|ref|ZP_01861054.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           SG-1]
 gi|148849719|gb|EDL63898.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           SG-1]
          Length = 345

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 4/123 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH+     +  ++  ENP   T E +         A  LEI +  + +     GL 
Sbjct: 217 RDEQLHVGLFEKIYKEVLHENPEYDTAELKVFGTQAFKRAAELEIEWGEQIIGNKIDGLL 276

Query: 62  APSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEKNFFETRVTEYQQ 118
               E Y++F+AN+R  Q+G + P   Y  NP  W+   + +DL K  +FFE +  +Y +
Sbjct: 277 MSDLEAYIKFMANKRAEQMGFQAPFEGYRTNPLRWIVAYQEVDLGK-TDFFEQKSRQYTK 335

Query: 119 GAE 121
            ++
Sbjct: 336 TSD 338


>gi|209170936|ref|YP_002268082.1| agip52 [Agrotis ipsilon multiple nucleopolyhedrovirus]
 gi|208436527|gb|ACI28754.1| ribonucleotide reductase-2B [Agrotis ipsilon multiple
           nucleopolyhedrovirus]
          Length = 313

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 65/118 (55%), Gaps = 10/118 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKS-RTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F   +  + ++      T++    +  +M  EA  +E  +    +P   +G+
Sbjct: 191 RDEGLHTDFAC-LYYKTRV------TEKLDSDTILSMFKEAVAIEKEFFTAALPVELLGM 243

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           NA S  +Y++F+A+R   Q+G +P +    NPF +M+  I L+ + NFFE RV EY++
Sbjct: 244 NAQSMCEYIEFVADRLLVQLG-QPKYFNARNPFEFMNN-ISLEGKTNFFEKRVGEYKR 299


>gi|254418345|ref|ZP_05032069.1| ribonucleoside-diphosphate reductase, beta subunit [Brevundimonas
           sp. BAL3]
 gi|196184522|gb|EDX79498.1| ribonucleoside-diphosphate reductase, beta subunit [Brevundimonas
           sp. BAL3]
          Length = 349

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + +    E   + TK               +E  +       G V G
Sbjct: 201 VRDESLHCEGIIKLYHAFNKETGAV-TKAVADDIVDCCKTVVNMEDRFIDLAFEMGSVQG 259

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     +QY++FIA+ R  Q+ L  ++   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 260 MTPEDIKQYIRFIADWRLRQLKLPEVYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 319

Query: 120 A 120
           A
Sbjct: 320 A 320


>gi|257062099|ref|YP_003139987.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8802]
 gi|256592265|gb|ACV03152.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8802]
          Length = 355

 Score = 57.0 bits (136), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I + +   PH   + +      M   A   E  + +  +    +G+ 
Sbjct: 227 RDELSHVRLYQKLIPEARKVFPHSVDQIYD-----MFDRAVKYECQWTNHIVGNNILGIT 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114
             S EQY +++AN R   IGL+PL+   KY ++P+  +    D KKE     NFFE  VT
Sbjct: 282 EASTEQYTKYLANIRLRSIGLDPLYPDIKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 341

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 342 SYVMSSGITGWD 353


>gi|218249013|ref|YP_002374384.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8801]
 gi|218169491|gb|ACK68228.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8801]
          Length = 344

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I + +   PH   + +      M   A   E  + +  +    +G+ 
Sbjct: 216 RDELSHVRLYQKLIPEARKVFPHSVDQIYD-----MFDRAVKYECQWTNHIVGNNILGIT 270

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114
             S EQY +++AN R   IGL+PL+   KY ++P+  +    D KKE     NFFE  VT
Sbjct: 271 EASTEQYTKYLANIRLRSIGLDPLYPDIKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 330

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 331 SYVMSSGITGWD 342


>gi|282879357|ref|ZP_06288101.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           buccalis ATCC 35310]
 gi|282881358|ref|ZP_06290037.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           timonensis CRIS 5C-B1]
 gi|281298554|gb|EFA90979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           buccalis ATCC 35310]
 gi|281304764|gb|EFA96845.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           timonensis CRIS 5C-B1]
          Length = 347

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P ++T E  +    M+ E    EIA+    +     GLN
Sbjct: 219 RDENTHLWLFRNIIKELKKEEPEMFTPEKVKVYEEMMREGVRQEIAWGQYVIGNDIQGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
           A     Y+ ++ N R H +G + L++  +       W+++  D    K +FFE + T Y 
Sbjct: 279 AQMVTDYIHYLGNLRWHSLGFDYLYEDNQKEPEDMKWVAQYSDPNMVKTDFFEAKSTAYA 338

Query: 118 QGAELKWD 125
           +   ++ D
Sbjct: 339 KSTAIEDD 346


>gi|68485781|ref|XP_713171.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
 gi|68485874|ref|XP_713125.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
 gi|46434604|gb|EAK94008.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
 gi|46434651|gb|EAK94054.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
 gi|238883648|gb|EEQ47286.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           albicans WO-1]
          Length = 394

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H ++   + + +K        K   +    ++ EA  +E  Y  + +P   +G+N
Sbjct: 266 RDEGIHTDYACLLFSYLK-------NKPSSEIIEKIITEAVDIEKEYFSDALPVSLLGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
                QY++F+A+R     G +  +  T NPF +M E I L  + NFFE RV++YQ+  
Sbjct: 319 CDLMCQYVEFVADRLLVAFGNKKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAG 375


>gi|90592764|ref|YP_529717.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
 gi|71559214|gb|AAZ38213.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
          Length = 313

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 8/117 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F           N  +  K       +M  EA  +E  +    +P   +G+N
Sbjct: 191 RDEGLHTDFAC------LYYNTRVHDKLAPDTVLSMFKEAVAIEKEFFTAALPAALLGMN 244

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           A S   Y++F+A+R   Q+  +P   +  NPF +M+  I L+ + NFFE RV EY++
Sbjct: 245 AQSMCDYIEFVADRLLVQLH-QPKHFHARNPFEFMNN-ISLEGKTNFFEKRVGEYKR 299


>gi|19703451|ref|NP_603013.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19713529|gb|AAL94312.1| Ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 348

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EI +    +    +G+ 
Sbjct: 220 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWTEHIIGNRVLGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336

Query: 117 QQGAEL 122
              + +
Sbjct: 337 NMSSSI 342


>gi|295691241|ref|YP_003594934.1| Ribonucleoside-diphosphate reductase [Caulobacter segnis ATCC
           21756]
 gi|295433144|gb|ADG12316.1| Ribonucleoside-diphosphate reductase [Caulobacter segnis ATCC
           21756]
          Length = 346

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH +  I + +    E   + TK               LE  +       G + G
Sbjct: 198 IRDESLHCDGIIKLYHAFNKETGAV-TKAVADDIVDCCKHVVGLEDKFIDLAFEAGEIQG 256

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     + Y++FIA+ R  Q+ L  ++   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 257 MTPDDIKSYIRFIADWRLRQLQLPEVYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 316

Query: 120 A 120
           A
Sbjct: 317 A 317


>gi|296329016|ref|ZP_06871523.1| ribonucleotide-diphosphate reductase beta subunit [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
 gi|296153909|gb|EFG94720.1| ribonucleotide-diphosphate reductase beta subunit [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
          Length = 348

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EI +    +    +G+ 
Sbjct: 220 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWTEHIIGNRVLGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336

Query: 117 QQGAEL 122
              + +
Sbjct: 337 NMSSSI 342


>gi|294784669|ref|ZP_06749957.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_27]
 gi|294486383|gb|EFG33745.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_27]
          Length = 344

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAEL 122
              + +
Sbjct: 333 NMSSSI 338


>gi|237743586|ref|ZP_04574067.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 7_1]
 gi|229432617|gb|EEO42829.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 7_1]
          Length = 344

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAEL 122
              + +
Sbjct: 333 NMSSSI 338


>gi|292397811|ref|YP_003517877.1| RR2b [Lymantria xylina MNPV]
 gi|291065528|gb|ADD73846.1| RR2b [Lymantria xylina MNPV]
          Length = 338

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  +    + R ++ +A  +E  +  E +P   +GLN
Sbjct: 214 RDEGLHCDFACLMFK-------HLVQRPSAARVREIVTDAVAIEQRFLTEALPVRLLGLN 266

Query: 62  APSCEQYMQFIANR-RCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
             +  QY++F+A+R     IG +     T NP  +M+ +I L+ + NFFE +V EYQ+
Sbjct: 267 CETMSQYIEFVADRLLVDLIGTKHY--NTANPLDFMT-LISLEGKTNFFEKKVGEYQK 321


>gi|9631087|ref|NP_047757.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
           MNPV]
 gi|3822355|gb|AAC70306.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
           MNPV]
          Length = 348

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 9/117 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         HL  +    + R ++ +A  +E  +  E +P   +GLN
Sbjct: 224 RDEGLHCDFACLLFK-------HLVQRPSAARVREIVTDAVAIEQRFLTEALPVRLLGLN 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
             +  QY++F+A+R   ++     +  T NP  +M+ +I L+ + NFFE +V EYQ+
Sbjct: 277 CETMSQYIEFVADRLLLELVGAKHYN-TPNPLDFMN-LISLEGKTNFFEKKVGEYQK 331


>gi|47208564|emb|CAF96041.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 352

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 2/71 (2%)

Query: 48  YAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
           +  E +P   +G+N    +QY++F+A+R    +GL  ++   ENPF +M E I L+ + N
Sbjct: 266 FLTEALPVDLIGMNRCLMKQYIEFVADRLFADLGLAKMYN-AENPFDFM-EAISLEGKTN 323

Query: 108 FFETRVTEYQQ 118
           FFE RV EYQ+
Sbjct: 324 FFEKRVAEYQR 334


>gi|256846215|ref|ZP_05551673.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_36A2]
 gi|256719774|gb|EEU33329.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_36A2]
          Length = 344

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAEL 122
              + +
Sbjct: 333 NMSSSI 338


>gi|329888543|ref|ZP_08267141.1| ribonucleotide reductase, small chain family protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328847099|gb|EGF96661.1| ribonucleotide reductase, small chain family protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 348

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 28/143 (19%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHE-----ATLLE-----IAYAH 50
           +RDESLH   GI       I+  H + KE    ++ +  +      T++E     I  A 
Sbjct: 201 VRDESLHCE-GI-------IKLYHAFNKETGAVTKAVADDIVDCCKTVIEMEDKFIDLAF 252

Query: 51  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFE 110
           E  P    G+     + Y++FIA+ R  Q+ L  ++  TENP PW+  ++   +  NFFE
Sbjct: 253 EMGPVN--GMTPDDIKAYIRFIADWRLRQLHLPEVYGVTENPLPWLQALLSGVEHANFFE 310

Query: 111 TRVTEYQQ--------GAELKWD 125
            R TEY +        GA+  WD
Sbjct: 311 ARATEYSKAATQGAWHGADGVWD 333


>gi|22788780|ref|NP_690492.1| Rr2 [Heliothis zea virus 1]
 gi|22671540|gb|AAN04367.1|AF451898_72 Rr2 [Heliothis zea virus 1]
          Length = 333

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 67/118 (56%), Gaps = 8/118 (6%)

Query: 2   RDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
           RDE LH +F I +  N ++ E      +   +K   ++ +A  +E  +  E++P   +G+
Sbjct: 205 RDEGLHCDFAILLFRNYLRPE-----CRSSDEKVINIVTDAVRIEQEFLTESLPVSMIGM 259

Query: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           N     +Y++F+A+R  +++    ++   +NPF +M+  I L+ + NFFE +V+EY++
Sbjct: 260 NCKLMCEYIEFVADRLLYELIGRKIYN-AKNPFDFMTS-ISLEGKTNFFEKKVSEYKR 315


>gi|322378346|ref|ZP_08052803.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS1]
 gi|322379688|ref|ZP_08054002.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS5]
 gi|321147887|gb|EFX42473.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS5]
 gi|321149232|gb|EFX43675.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS1]
          Length = 342

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL+   ++IN ++ E   L++ E   +   M  +A  LE A+         + L+
Sbjct: 218 RDELTHLHLFQNMINTLRKERSDLFSPELIAEVNEMFKQAVDLESAWGAYITQGEMLDLS 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
                 Y +++A+ R   +GL  L+  ++NP  W+ +  +    + NFFE +V+ Y +G+
Sbjct: 278 PQILRTYTEYLADTRLAVVGLPKLYN-SQNPIKWVDQFANFNSHRSNFFEAKVSNYSKGS 336


>gi|269866968|ref|XP_002652448.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062479|gb|EED41609.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 100

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 2/85 (2%)

Query: 35  RTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP 94
           + ++ EA  +E  +  E++P   +G+N     QY++F+A+R    +G + ++  + NPF 
Sbjct: 2   KDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFD 60

Query: 95  WMSEVIDLKKEKNFFETRVTEYQQG 119
           +M E I L+ + NFFE R   YQ+G
Sbjct: 61  FM-ENISLQGKTNFFERREANYQKG 84


>gi|313887688|ref|ZP_07821370.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           harei ACS-146-V-Sch2b]
 gi|312846297|gb|EFR33676.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           harei ACS-146-V-Sch2b]
          Length = 346

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 8/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I ++K E P ++T E  +K + ML +    EIA+    +     GLN
Sbjct: 218 RDENTHLWLFRSIILEMKKEEPEIFTDENIEKYKEMLKKGVEEEIAWGKYVIGDEIKGLN 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115
               E Y+ ++ N R   +G   LF   EN        W+SE  D  + K +FFE R + 
Sbjct: 278 EKMIEDYIMYLGNLRSRNLGFGNLF--DENIDEPESMKWVSEYSDPNQIKTDFFEARPSA 335

Query: 116 YQQGAELKWD 125
           Y + + ++ D
Sbjct: 336 YSKSSVIEDD 345


>gi|258567064|ref|XP_002584276.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
           reesii 1704]
 gi|237905722|gb|EEP80123.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
           reesii 1704]
          Length = 401

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       H+  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 265 RDEGLHTDFACLLFS-------HIRHRPTPAAVEAIITEAVEIEKEFLTDALPCALLGMN 317

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  T NPF +M   I L  + NFFE RV +YQ+  
Sbjct: 318 SKLMCQYIEFVADRLLVALGNKKFYHAT-NPFDFMDN-ISLAGKTNFFEKRVGDYQKAG 374


>gi|242777635|ref|XP_002479074.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218722693|gb|EED22111.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 406

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +   +    ++ +A  +E  +  + +P   +G+N
Sbjct: 268 RDEGLHTDFACLLFS-------HLNNRPNPKVIEDIIVDAVAIEQEFLTDALPCSLLGMN 320

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  T NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYNST-NPFDFM-ENISLAGKTNFFEKRVGDYQKAG 377


>gi|213402763|ref|XP_002172154.1| ribonucleoside-diphosphate reductase small chain
           [Schizosaccharomyces japonicus yFS275]
 gi|212000201|gb|EEB05861.1| ribonucleoside-diphosphate reductase small chain
           [Schizosaccharomyces japonicus yFS275]
          Length = 392

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 9/116 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   + + +K    H   K+  ++   ++ EA  +E  Y  + +P   +G+N
Sbjct: 263 RDEGVHTDFACLMFSHLK----HRPGKKVVER---IIIEAVNIEKEYFTDALPVYLLGMN 315

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
                QY++F+A+R    +G E  +  T NPF +M E I L  + NFFE +V++YQ
Sbjct: 316 CDLMCQYIEFVADRLLLSLGNEKYYNVT-NPFDFM-ENISLAGKTNFFEKKVSDYQ 369


>gi|331083185|ref|ZP_08332301.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 6_1_63FAA]
 gi|330404574|gb|EGG84114.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 6_1_63FAA]
          Length = 347

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I Q+K E P L+TKE  Q  + ML E    EIA+ H  +     G++
Sbjct: 219 RDENTHLWLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAWGHYVLGDDIPGIS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                +Y++++ N R   +G + ++  Y + P    W+S   +    K +FFE + T Y 
Sbjct: 279 KEMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVKTDFFEAKSTAYA 338

Query: 118 QGAEL 122
           +   L
Sbjct: 339 KSTAL 343


>gi|62866936|gb|AAY17359.1| ribonucleotide reductase small subunit [Haemonchus contortus]
          Length = 374

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 24  HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE 83
           H+  K  Q++   ++ +A  +E  +  E++P   +G+N     QY++++A+    ++G E
Sbjct: 264 HIKNKLSQERIYYIIRDAVAIEQEFLSESLPVDMIGMNCRLMCQYIEYVADHLLVELGCE 323

Query: 84  PLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
            + K ++NPF +M E I +  + NFFE +V+EYQ+   L
Sbjct: 324 KICK-SKNPFDFM-ENISIDGKTNFFEKKVSEYQRPGVL 360


>gi|209972895|ref|YP_002300342.1| gp4 [Bacillus phage SPO1]
 gi|209871215|gb|ACI90971.1| gp4 [Bacillus phage SPO1]
          Length = 346

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 4/123 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F   V+  +  E P L T+E       M+ EA  LEI Y+ + +     GL+
Sbjct: 218 RDEVAHAYFFSQVLRYLMAERPELHTEENVNFIYDMMQEAADLEIEYSQKIL-HDIPGLD 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL---KKEKNFFETRVTEYQQ 118
               E Y++ + NRR   +GL+ ++   EN  PWM    D    + + + FE +   Y++
Sbjct: 277 LEELEGYIKSLCNRRLRGVGLDDIYAGVENSMPWMIAFDDGSNNQTKSDMFEQKSRNYKK 336

Query: 119 GAE 121
             E
Sbjct: 337 VDE 339


>gi|260589755|ref|ZP_05855668.1| ribonucleoside-diphosphate reductase, beta subunit [Blautia
           hansenii DSM 20583]
 gi|260539995|gb|EEX20564.1| ribonucleoside-diphosphate reductase, beta subunit [Blautia
           hansenii DSM 20583]
          Length = 359

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I Q+K E P L+TKE  Q  + ML E    EIA+ H  +     G++
Sbjct: 231 RDENTHLWLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAWGHYVLGDDIPGIS 290

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
                +Y++++ N R   +G + ++  Y + P    W+S   +    K +FFE + T Y 
Sbjct: 291 KEMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVKTDFFEAKSTAYA 350

Query: 118 QGAEL 122
           +   L
Sbjct: 351 KSTAL 355


>gi|297587320|ref|ZP_06945965.1| ribonucleotide-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 53516]
 gi|297575301|gb|EFH94020.1| ribonucleotide-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 53516]
          Length = 354

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I  +K E P L+T+E   + + M+ + +  EI +A   + +   GL+
Sbjct: 226 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGSEAEIEWAKYVIGEKIQGLS 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +G   ++   E   P   W+SE  D  K K +FFE + + Y 
Sbjct: 286 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 345

Query: 118 QGAELKWD 125
           + A ++ D
Sbjct: 346 KSAIIEDD 353


>gi|197103810|ref|YP_002129187.1| ribonucleoside-diphosphate reductase, beta subunit
           [Phenylobacterium zucineum HLK1]
 gi|196477230|gb|ACG76758.1| ribonucleoside-diphosphate reductase, beta subunit
           [Phenylobacterium zucineum HLK1]
          Length = 350

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH    I + +    E   + T+               LE  +       G V G
Sbjct: 201 VRDESLHCEGIIKLYHAFNKETGAV-TQAVADDIVDCCKTVVGLEDKFIDLAFEAGEVQG 259

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     +QY++FIA+ R  Q+ L  ++   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 260 MTPDDIKQYIRFIADWRLKQLHLPQVYGIKENPLPWLQSMLSGVEHANFFEARATEYSKA 319

Query: 120 A 120
           A
Sbjct: 320 A 320


>gi|227871657|ref|ZP_03990072.1| ribonucleoside-diphosphate reductase [Oribacterium sinus F0268]
 gi|227842499|gb|EEJ52714.1| ribonucleoside-diphosphate reductase [Oribacterium sinus F0268]
          Length = 347

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL F  +++ ++K E P L+ +    +   M+ +    EIA+    +     GLN
Sbjct: 219 RDENTHLWFFRNMLLELKKEEPELFDEAHIAEITEMVKKGVEQEIAWGQYVIGDSIPGLN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +GL  L++ Y + P    W+S+  D    K +FFE R T Y 
Sbjct: 279 GKMVEDYIRYLGNLRYRSLGLPNLYEGYEKEPESMKWVSQYADANMVKTDFFEARSTAYA 338

Query: 118 QGAELKWD 125
           +   ++ D
Sbjct: 339 KSTAIEDD 346


>gi|322499081|emb|CBZ34153.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 269

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 22  NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIG 81
           N H+  K  +++   ++ +A  +E  +  + +P   +G+NA    QY++F+A+R    +G
Sbjct: 156 NSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMNAELMAQYIEFVADRLLVSLG 215

Query: 82  LEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
            E  ++ T+ PF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 216 EEKHYRSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 252


>gi|73974200|ref|XP_858061.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 3 [Canis familiaris]
          Length = 338

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 22/119 (18%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++  A  +E  +  E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++F+                 ENPF +M E I L+ + NFFE RV EYQ+ A
Sbjct: 279 CVLMKQYIEFVFQ--------------AENPFDFM-ENISLEGKTNFFEKRVAEYQRFA 322


>gi|17567153|ref|NP_508269.1| hypothetical protein F19G12.2 [Caenorhabditis elegans]
 gi|10864352|gb|AAG24065.1| Hypothetical protein F19G12.2 [Caenorhabditis elegans]
          Length = 668

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 52/82 (63%), Gaps = 2/82 (2%)

Query: 37  MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
           +++E+ L+E  +  E++P   +G+N     +Y++F+A+    ++G    +  T+NPF +M
Sbjct: 571 IINESVLVEQDFVRESLPTNLIGMNQHMMCKYVEFVADLLLEELGYSKRYN-TKNPFDFM 629

Query: 97  SEVIDLKKEKNFFETRVTEYQQ 118
            E I ++ + NFFE RV+EYQ+
Sbjct: 630 -ENISIEGKTNFFEKRVSEYQR 650


>gi|159030376|emb|CAO91271.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 355

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +     PH   + ++     M   A   E  + +  +    +G+ 
Sbjct: 227 RDELSHVRLYQKLIPEAMAIFPHSVEQIYE-----MFDSAVKHECCWTNHIVGNDILGIT 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114
             S EQY +++AN R   IGLEPL+   KY ++P+  +    D KKE     NFFE  VT
Sbjct: 282 EYSTEQYTKYLANIRLKAIGLEPLYREEKYNKSPYNHLERFSDTKKEGHTKANFFEATVT 341

Query: 115 EYQQGAELK-WD 125
            Y   + L  WD
Sbjct: 342 SYVMSSGLTGWD 353


>gi|67921622|ref|ZP_00515140.1| Ribonucleoside-diphosphate reductase [Crocosphaera watsonii WH
           8501]
 gi|67856734|gb|EAM51975.1| Ribonucleoside-diphosphate reductase [Crocosphaera watsonii WH
           8501]
          Length = 321

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I + +   PH   + ++     M   A   E  + +  +    +G+ 
Sbjct: 193 RDELSHVRLYQKLIPEARKVFPHSVEQIYE-----MFDMAVNYECRWTNHIVGNNILGIT 247

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114
             S E+Y +++AN R   IGLEPL+   KY+++P+  +    D KK    + NFFE  VT
Sbjct: 248 ESSTEKYTKYLANIRLRSIGLEPLYPEPKYSKSPYTHLERFSDTKKAAHTKANFFEATVT 307

Query: 115 EYQQGAELK-WD 125
            Y   + L  WD
Sbjct: 308 SYVMSSGLTGWD 319


>gi|299747484|ref|XP_001837064.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
 gi|298407540|gb|EAU84681.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
          Length = 379

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE +H +F   +   ++ + PH            ++ EA  +E  +  + +P   +G+N
Sbjct: 249 RDEGMHTDFACLLFAYLR-KRPH------SDTILAIVTEAVEIEKEFFSDALPVSLIGMN 301

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +    QY++F+A+R    +G +  + + +NPF +M E+I ++ + NFFE RV++Y + 
Sbjct: 302 SSLMNQYIEFVADRLLTSLGNDKHY-HVDNPFDFM-ELISMEGKANFFEKRVSDYAKA 357


>gi|291461082|ref|ZP_06026838.2| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           periodonticum ATCC 33693]
 gi|291379059|gb|EFE86577.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           periodonticum ATCC 33693]
          Length = 348

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P  ++ E      +M   A   EI +    +    +G+ 
Sbjct: 220 RDELSHVVLFRSIVKEIKNDYPEFFSAE---TIYSMFKTAVEQEINWTEHIIGNRVLGIT 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPL+  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336

Query: 117 QQGAEL 122
              + +
Sbjct: 337 NMSSSI 342


>gi|15639047|ref|NP_218493.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           pallidum subsp. pallidum str. Nichols]
 gi|189025287|ref|YP_001933059.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           pallidum subsp. pallidum SS14]
 gi|6093976|sp|O83092|RIR2_TREPA RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3322311|gb|AAC65049.1| ribonucleoside-diphosphate reductase, subunit beta (nrdB)
           [Treponema pallidum subsp. pallidum str. Nichols]
 gi|189017862|gb|ACD70480.1| ribonucleoside-diphosphate reductase, subunit beta [Treponema
           pallidum subsp. pallidum SS14]
 gi|291059468|gb|ADD72203.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           pallidum subsp. pallidum str. Chicago]
          Length = 351

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P ++T    +  R M+ E    EI +    +     GLN
Sbjct: 223 RDENTHLWLFRSIIQELQKEEPQVFTARNVRLFRDMIREGCEQEIKWGDYVIGDQIPGLN 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N RC  +G EPL+   +       W+S+  +    K +FFE + T Y 
Sbjct: 283 RHMVADYIRYLGNLRCENLGFEPLYEGHRVEPESMSWVSQYSNANLIKTDFFEAKSTAYA 342

Query: 118 QGAEL 122
           + + +
Sbjct: 343 KSSAM 347


>gi|319785673|ref|YP_004145148.1| ribonucleotide reductase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464185|gb|ADV25917.1| ribonucleotide reductase [Pseudoxanthomonas suwonensis 11-1]
          Length = 354

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  +VI  I  ENP L T E           A  LE  +  E +  G  G++
Sbjct: 226 RDELAHTKFISEVIRAIVGENPELQTDELADYVHLAFRHAIELETQWTGEVL-DGIDGID 284

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L+ + T+N  PW+    D   + + +FFE R   Y++
Sbjct: 285 VDEMIRYVKYRANKMAGMLGIESLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 344


>gi|269861752|ref|XP_002650564.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220065950|gb|EED43491.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 106

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 2/83 (2%)

Query: 37  MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
           ++ EA  +E  +  E++P   +G+N     QY++F+A+R    +G + ++  + NPF +M
Sbjct: 10  IVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM 68

Query: 97  SEVIDLKKEKNFFETRVTEYQQG 119
            E I L+ + NFFE R   YQ+G
Sbjct: 69  -ENISLQGKTNFFERREANYQKG 90


>gi|237738722|ref|ZP_04569203.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 2_1_31]
 gi|229423825|gb|EEO38872.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 2_1_31]
          Length = 344

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P  ++ E      +M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFRSIVKEIKNDYPEFFSAE---TIYSMFKTAVEQEINWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPL+  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAEL 122
              + +
Sbjct: 333 NMSSSI 338


>gi|119485472|ref|ZP_01619800.1| hypothetical protein L8106_10031 [Lyngbya sp. PCC 8106]
 gi|119457228|gb|EAW38354.1| hypothetical protein L8106_10031 [Lyngbya sp. PCC 8106]
          Length = 359

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +     PH   + ++     M   A   E  + +  + +  +G+ 
Sbjct: 231 RDELSHVRLYQKLIPEAMQTFPHSVEQIYE-----MFDTAVQHECRWTNHIVGRNILGIT 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114
             S EQY +++AN R   IGL+PL+   +Y+++P+  +    D KKE     NFFE  VT
Sbjct: 286 ETSTEQYTKYLANARLRSIGLKPLYTDPRYSKSPYTHLERFSDTKKEAHTKANFFEASVT 345

Query: 115 EYQQGAEL-KWD 125
            Y   + +  WD
Sbjct: 346 SYVMSSGVGGWD 357


>gi|282174133|ref|YP_003358235.1| ORF96 [Anguillid herpesvirus 1]
 gi|281308976|gb|ADA57859.1| ORF96 [Anguillid herpesvirus 1]
          Length = 328

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 8/117 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         H+  K   ++   ++ EA  +E  +  E +P   +G+N
Sbjct: 202 RDEGLHCDFACLLFKD------HILGKPGYERVSQIVTEAVEIEKEFLSEALPVRLLGIN 255

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
                 Y++F+A+R    +G  P   + +NPF +M E I ++ + NFFE  V++Y++
Sbjct: 256 CEQMCSYIEFVADRLLAALGF-PKRYHVKNPFGFM-ESISMEGKTNFFEKNVSQYKK 310


>gi|16332312|ref|NP_443040.1| hypothetical protein slr0591 [Synechocystis sp. PCC 6803]
 gi|1653942|dbj|BAA18852.1| slr0591 [Synechocystis sp. PCC 6803]
          Length = 355

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 8/97 (8%)

Query: 37  MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPF 93
           M  +A   E  + +  +    +G+   S EQY +++AN R   IGL+PL+   +Y ++P+
Sbjct: 257 MFDKAVEFECRWTNHIVGNNILGITESSTEQYTKYLANSRLRAIGLDPLYTDARYGKSPY 316

Query: 94  PWMSEVIDLKKE----KNFFETRVTEYQQGAELK-WD 125
             +    D KKE     NFFE  VT Y   + +  WD
Sbjct: 317 THLERFSDTKKEAHTKANFFEATVTSYVMSSGVSGWD 353


>gi|284929768|ref|YP_003422290.1| ribonucleotide reductase, subunit beta [cyanobacterium UCYN-A]
 gi|284810212|gb|ADB95909.1| ribonucleotide reductase, beta subunit [cyanobacterium UCYN-A]
          Length = 354

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I + +   PH   + ++     M   A   E  + +  +    +G+ 
Sbjct: 226 RDELSHVRLYQKLIPEARKVFPHSTEQIYE-----MFDTAVNHECRWTNHIVGSNILGIT 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114
             S EQY +++AN R   IGLEPL+   ++T++P+  +    D KK+     NFFE+ VT
Sbjct: 281 ESSTEQYTKYLANIRLRSIGLEPLYTGEEFTKSPYSHLERFSDTKKDGHTKANFFESTVT 340

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 341 SYVMSSGVSGWD 352


>gi|303234233|ref|ZP_07320879.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna BVS033A4]
 gi|302494774|gb|EFL54534.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna BVS033A4]
          Length = 347

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I  +K E P L+T+E   + + M+ +    EI +A   + +   GL+
Sbjct: 219 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWAKYVIGEKIQGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +G   ++   E   P   W+SE  D  K K +FFE + + Y 
Sbjct: 279 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 338

Query: 118 QGAELKWD 125
           + A ++ D
Sbjct: 339 KSAIIEDD 346


>gi|302379704|ref|ZP_07268189.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna ACS-171-V-Col3]
 gi|302312611|gb|EFK94607.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna ACS-171-V-Col3]
          Length = 347

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I  +K E P L+T+E   + + M+ +    EI +A   + +   GL+
Sbjct: 219 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWAKYVIGEKIQGLS 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +G   ++   E   P   W+SE  D  K K +FFE + + Y 
Sbjct: 279 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 338

Query: 118 QGAELKWD 125
           + A ++ D
Sbjct: 339 KSAIIEDD 346


>gi|237742881|ref|ZP_04573362.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 4_1_13]
 gi|229430529|gb|EEO40741.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 4_1_13]
          Length = 344

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P+ ++ E      +M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPL+  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAEL 122
              + +
Sbjct: 333 NMSSSI 338


>gi|222824493|ref|YP_002576067.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           lari RM2100]
 gi|222539714|gb|ACM64815.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           lari RM2100]
          Length = 340

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 2/120 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  HL    ++IN ++ E   L+      K   M  +A  LEI +         +G  
Sbjct: 216 RDEITHLLLFQNMINSVRKERADLFNDTNVSKIYDMFKKAGELEIKWGKYITQNQIMGFT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
               E+Y+ ++ ++R   I L+ ++   ++P  W+ +      +K NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLIAINLDKIYN-VKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334


>gi|194319980|pdb|2VUX|A Chain A, Human Ribonucleotide Reductase, Subunit M2 B
 gi|194319981|pdb|2VUX|B Chain B, Human Ribonucleotide Reductase, Subunit M2 B
          Length = 326

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 9/106 (8%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 230 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + N
Sbjct: 283 CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTN 326


>gi|169824933|ref|YP_001692544.1| ribonucleotide-diphosphate reductase subunit beta [Finegoldia magna
           ATCC 29328]
 gi|167831738|dbj|BAG08654.1| ribonucleoside-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 29328]
          Length = 354

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I  +K E P L+T+E   + + M+ +    EI +A   + +   GL+
Sbjct: 226 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWAKYVIGEKIQGLS 285

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +G   ++   E   P   W+SE  D  K K +FFE + + Y 
Sbjct: 286 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 345

Query: 118 QGAELKWD 125
           + A ++ D
Sbjct: 346 KSAIIEDD 353


>gi|71033209|ref|XP_766246.1| ribonucleotide-diphosphate reductase small subunit [Theileria parva
           strain Muguga]
 gi|68353203|gb|EAN33963.1| ribonucleotide-diphosphate reductase small subunit, putative
           [Theileria parva]
          Length = 308

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 18/105 (17%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +FG  + + +K + P       ++  + ++ EA ++E +Y  +++P   +G+N
Sbjct: 201 RDEGLHADFGCFIYHNLKHKLP-------EEAVQQIIKEAVVVERSYICDSLPCDLIGMN 253

Query: 62  A-----PSC-----EQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
           +       C      QY++F+A+R    +G+ P++  T NPF WM
Sbjct: 254 SRKKILTHCLIELMTQYIEFVADRLLQALGVRPVYNVT-NPFDWM 297


>gi|307151334|ref|YP_003886718.1| ribonucleotide reductase [Cyanothece sp. PCC 7822]
 gi|306981562|gb|ADN13443.1| ribonucleotide reductase [Cyanothece sp. PCC 7822]
          Length = 355

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +     PH   K ++     M   A   E  + +  +    +G+ 
Sbjct: 227 RDELSHVRLYQKIIAEAMQTFPHSVDKVYE-----MFDTAVHHECRWTNHIVGDNILGIT 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114
             S EQY +++AN R   IGL+PL+   KY ++P+  +    D KK+     NFFE  VT
Sbjct: 282 ESSTEQYTKYLANIRLKAIGLKPLYADEKYQKSPYSHLERFSDTKKDAHTKANFFEATVT 341

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 342 SYVMSSGVTGWD 353


>gi|126654703|ref|ZP_01726237.1| hypothetical protein CY0110_09717 [Cyanothece sp. CCY0110]
 gi|126623438|gb|EAZ94142.1| hypothetical protein CY0110_09717 [Cyanothece sp. CCY0110]
          Length = 352

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I + +   PH   + ++     M   A   E  + +  +    +G+ 
Sbjct: 224 RDELSHVRLYQKLIPEARKVFPHSVEQIYE-----MFDMAVNYECRWTNHIVGNNILGIT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114
             S E+Y +++AN R   IGLEPL+   KY ++P+  +    D KKE     NFFE  VT
Sbjct: 279 ESSTEKYTKYLANIRLRSIGLEPLYPEPKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 338

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 339 SYVMSSGVTGWD 350


>gi|288554979|ref|YP_003426914.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           pseudofirmus OF4]
 gi|288546139|gb|ADC50022.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           pseudofirmus OF4]
          Length = 344

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH+    +V  ++  E+P L  +E +   +  L  A  LE+ + +  + +   G+ 
Sbjct: 216 RDEQLHVYLFTNVFKELLEEHPELNNREMESFVKQSLTTAVELELKWYNYIIGEQIEGVT 275

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
           +     Y++FIAN+R  Q+G + +F ++  N F W+    D+   K +FFE +  +Y +
Sbjct: 276 SDEMGSYLKFIANKRAKQLGYDHIFPEHRTNVFKWIKAYEDVNAAKSDFFEQKSRQYAK 334


>gi|223983469|ref|ZP_03633655.1| hypothetical protein HOLDEFILI_00935 [Holdemania filiformis DSM
           12042]
 gi|223964641|gb|EEF68967.1| hypothetical protein HOLDEFILI_00935 [Holdemania filiformis DSM
           12042]
          Length = 348

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L+T E +Q  R ML +    EI +    +     GLN
Sbjct: 220 RDENTHLWLFRSMILELRKEEPQLFTPEREQLYREMLKQGVEEEIEWGCAILGDEIPGLN 279

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK-NFFETRVTEYQ 117
                 Y++++ N R   I LE L+   E       W+S+  +    K +FFE R + Y 
Sbjct: 280 KTMIRDYIRYLGNLRAKAIHLEILYPGEEEEPASMKWVSQYANANLIKTDFFEARSSAYA 339

Query: 118 QGAELKWD 125
           + + LK D
Sbjct: 340 KASALKDD 347


>gi|2465173|emb|CAA71741.1| ribonucleotide reductase (Class I) [Trypanosoma brucei brucei]
          Length = 337

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      ++  K  + +   ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  ++NPF +M ++I L+ + NFFE +V EYQ+  
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFFEKKVGEYQKAG 320


>gi|74025550|ref|XP_829341.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834727|gb|EAN80229.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|261335315|emb|CBH18309.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      ++  K  + +   ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  ++NPF +M ++I L+ + NFFE +V EYQ+  
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFFEKKVGEYQKAG 320


>gi|74025554|ref|XP_829343.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834729|gb|EAN80231.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
          Length = 337

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      ++  K  + +   ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  ++NPF +M ++I L+ + NFFE +V EYQ+  
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFFEKKVGEYQKAG 320


>gi|261335316|emb|CBH18310.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      ++  K  + +   ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  ++NPF +M ++I L+ + NFFE +V EYQ+  
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFFEKKVGEYQKAG 320


>gi|165969130|ref|YP_001651030.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
 gi|164663626|gb|ABY65846.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
          Length = 339

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 6/117 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH NF     N+   E   + + E       M  EA  +E  +    +P   +G+N
Sbjct: 215 RDEGLHTNFACLYYNEYIDERDKMSSAEILD----MFVEAVNIEKEFFTSALPCDLLGMN 270

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
           + +  +Y++F+A+R   ++  +P    T NPF +M+  I L+ + NFFE RV EY++
Sbjct: 271 SRAMCEYIEFVADRLLTELQ-QPKHFNTPNPFNFMNN-ISLEGKTNFFERRVGEYKR 325


>gi|3914640|sp|O15910|RIR2_TRYBB RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2411479|gb|AAB70705.1| ribonucleotide reductase small subunit [Trypanosoma brucei]
 gi|261335314|emb|CBH18308.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 8/119 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   +  +      ++  K  + +   ++  A  +E  +  + +P   +G+N
Sbjct: 210 RDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  ++NPF +M ++I L+ + NFFE +V EYQ+  
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFFEKKVGEYQKAG 320


>gi|319790519|ref|YP_004152152.1| ribonucleotide reductase [Thermovibrio ammonificans HB-1]
 gi|317115021|gb|ADU97511.1| ribonucleotide reductase [Thermovibrio ammonificans HB-1]
          Length = 352

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 5/100 (5%)

Query: 31  QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
           + K   M   A   E  ++ + +    +G+N  S E Y  +IAN+R   +GLEP+F    
Sbjct: 251 KDKIYDMFRIAVDQEQRFSKKVIGNKILGMNEQSIEDYTFYIANKRLKALGLEPIFPDRG 310

Query: 91  NPFPWMSEVIDLKKE----KNFFETRVTEYQQGAELK-WD 125
           NP+  +  + D   E     NFFE  VT Y Q   ++ WD
Sbjct: 311 NPYEHLERIADTGGEANVKANFFEATVTSYNQANAVEGWD 350


>gi|172036555|ref|YP_001803056.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
           ATCC 51142]
 gi|171698009|gb|ACB50990.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
           ATCC 51142]
          Length = 352

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I + +   PH   + ++     M   A   E  + +  +    +G+ 
Sbjct: 224 RDELSHVRLYQKLIPEARKVFPHSVEQIYE-----MFDMAVNYECRWTNHIVGNNILGIT 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114
             S E+Y +++AN R   IGLEPL+   KY ++P+  +    D KKE     NFFE  VT
Sbjct: 279 ESSTEKYTKYLANIRLRSIGLEPLYPEPKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 338

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 339 SYVMSSGVTGWD 350


>gi|164659270|ref|XP_001730759.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
 gi|159104657|gb|EDP43545.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
          Length = 397

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E  +  + +P   +G+N
Sbjct: 266 RDEGLHTDFACLLFS-------HLKKRAHPDTVNRIITEAVDIEQDFLTDALPVSLIGMN 318

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           A    QY++F+A+R    +G  P    + NPF +M E I L+ + NFFE RV +Y +   
Sbjct: 319 ARLMCQYIEFVADRLLVALG-NPKHYNSTNPFDFM-ENISLQGKSNFFERRVGDYAKAGV 376

Query: 122 LKWD 125
            + D
Sbjct: 377 ARAD 380


>gi|294782021|ref|ZP_06747353.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 1_1_41FAA]
 gi|294481832|gb|EFG29601.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 1_1_41FAA]
          Length = 344

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 8/126 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     ++ +IK + P  ++ E      +M   A   EI +    +    +G+ 
Sbjct: 216 RDELSHVVLFRSIVKEIKNDYPEFFSAE---TIYSMFKTAVEQEINWTEHIIGNRVLGIT 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           + + E Y +++AN R   +GLEPL+  + +NP+  +    D + E     NFFE  VT Y
Sbjct: 273 SQTTEVYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332

Query: 117 QQGAEL 122
              + +
Sbjct: 333 NMSSSI 338


>gi|16124515|ref|NP_419079.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter
           crescentus CB15]
 gi|221233200|ref|YP_002515636.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter
           crescentus NA1000]
 gi|13421393|gb|AAK22247.1| ribonucleoside-diphosphate reductase, beta subunit [Caulobacter
           crescentus CB15]
 gi|220962372|gb|ACL93728.1| ribonucleoside-diphosphate reductase beta chain [Caulobacter
           crescentus NA1000]
          Length = 347

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 2/121 (1%)

Query: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-G 59
           +RDESLH +  I + +    E   + TK               +E  +       G + G
Sbjct: 198 IRDESLHCDGIIKLYHAFNKETGAV-TKAVADDIVDCCKTVVGMEDNFIDLAFEAGDIQG 256

Query: 60  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
           +     + Y++F+A+ R  Q+ L  ++   ENP PW+  ++   +  NFFE R TEY + 
Sbjct: 257 MTPDDIKAYIRFVADWRLRQLHLPEVYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 316

Query: 120 A 120
           A
Sbjct: 317 A 317


>gi|19074323|ref|NP_585829.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
           cuniculi GB-M1]
 gi|51701822|sp|Q8SRR2|RIR2_ENCCU RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|19068965|emb|CAD25433.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
           cuniculi GB-M1]
          Length = 325

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 11/118 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH  F   +         H   K+   + + ++ +A  +E  +  E++P   +G+N
Sbjct: 202 RDEGLHCEFACLL---------HYHLKKKCNRIKEVVMDAVEIEKKFLSESLPVNLIGMN 252

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
                +Y++F+A+R    +G E ++  T NPF +M E I L  + NFF+ R ++YQ+ 
Sbjct: 253 CNLMCRYIEFVADRLLENLGEERVYNAT-NPFDFM-ENISLVGKTNFFDKRESQYQKA 308


>gi|71024571|ref|XP_762515.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
 gi|46101992|gb|EAK87225.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
          Length = 424

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 9/124 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       HL  +        ++ EA  +E A+  E++P   +G+N
Sbjct: 289 RDEGLHTDFACLLFS-------HLRRRAHPDTVLKIITEAVEIEKAFLCESIPVALIGMN 341

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
           +    QY++++A+R    +G  P+   +  PF +M+  I L+ + NFFE +V EY +   
Sbjct: 342 SKLMCQYIEYVADRLLVSLG-NPVHYGSTCPFDFMTN-ISLEGKTNFFEKKVAEYAKAGV 399

Query: 122 LKWD 125
            + D
Sbjct: 400 ARKD 403


>gi|323487827|ref|ZP_08093085.1| ribonucleotide-diphosphate reductase subunit beta [Planococcus
           donghaensis MPA1U2]
 gi|323398561|gb|EGA91349.1| ribonucleotide-diphosphate reductase subunit beta [Planococcus
           donghaensis MPA1U2]
          Length = 348

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 4/123 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F    I  +  ENP L T E  Q   T + +A  LE  +A   +     GL+
Sbjct: 220 RDEMQHAYFIAQFIRIMLTENPELHTDENIQYIYTTIDKAVQLEKEWAQYILA-DIEGLD 278

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL---KKEKNFFETRVTEYQQ 118
                +Y++++AN+R  Q+GL+ L++   NP PW+    D      + +FFE +   Y +
Sbjct: 279 LVEFGEYVEYLANKRLRQLGLDNLYEERSNPMPWIQVFGDDMMNDTKSDFFEQKSRTYTK 338

Query: 119 GAE 121
            ++
Sbjct: 339 VSQ 341


>gi|166367085|ref|YP_001659358.1| ribonucleoside-diphosphate reductase beta chain [Microcystis
           aeruginosa NIES-843]
 gi|166089458|dbj|BAG04166.1| ribonucleoside-diphosphate reductase beta chain [Microcystis
           aeruginosa NIES-843]
          Length = 283

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 18/130 (13%)

Query: 14  VINQIKIENPHLWTKEFQQKSRTMLHEAT----LLEIAYAHET------MPKGFVGLNAP 63
           +IN+ ++ +  L+ K   +   T  H       + + A  HE       +    +G+   
Sbjct: 152 MINRDELSHVRLYQKLIPEAMATFSHSVEQIYEMFDTAVKHECRWTNHIVGNDILGITEY 211

Query: 64  SCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVTEY 116
           S EQY +++AN R   IGLEPL+   KY ++P+  +    D KKE     NFFE  VT Y
Sbjct: 212 STEQYTKYLANIRLKAIGLEPLYREEKYNKSPYNHLERFSDTKKEGHTKANFFEATVTSY 271

Query: 117 QQGAELK-WD 125
              + L  WD
Sbjct: 272 VMSSGLTGWD 281


>gi|78486104|ref|YP_392029.1| ribonucleotide-diphosphate reductase subunit beta [Thiomicrospira
           crunogena XCL-2]
 gi|78364390|gb|ABB42355.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Thiomicrospira crunogena XCL-2]
          Length = 377

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 2   RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKG- 56
           RDE+LHL+    +IN +    ++P +    KE ++K   +  EA   E  +A      G 
Sbjct: 238 RDEALHLSGTQHLINILSEGKDDPEMMEIAKENEEKVYEIFREAAEQEKEWADYLFKDGS 297

Query: 57  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
            +GLNA   + Y+++I N R   I L P+F+   NP PWM+
Sbjct: 298 MIGLNASILKDYVEYITNTRIKAIKLNPIFENKSNPLPWMN 338


>gi|156564205|ref|YP_001429715.1| nrd beta subunit [Bacillus phage 0305phi8-36]
 gi|154622902|gb|ABS83782.1| nrd beta subunit [Bacillus phage 0305phi8-36]
          Length = 352

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F   +I ++  ENP L T+E  Q     L EA   E  +A E +     GL+
Sbjct: 224 RDEMQHAYFIGLLIRRLLTENPELNTQENAQYIVDSLKEAVATEKEWAGEILAD-IEGLD 282

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
               + Y++++AN+R  Q+G++ +++   NP PW+
Sbjct: 283 LEEFDHYIEYLANKRVRQLGMDNIYEERGNPMPWI 317


>gi|212693366|ref|ZP_03301494.1| hypothetical protein BACDOR_02879 [Bacteroides dorei DSM 17855]
 gi|237710423|ref|ZP_04540904.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           9_1_42FAA]
 gi|237726931|ref|ZP_04557412.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           D4]
 gi|212664010|gb|EEB24584.1| hypothetical protein BACDOR_02879 [Bacteroides dorei DSM 17855]
 gi|229433787|gb|EEO43864.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           dorei 5_1_36/D4]
 gi|229455145|gb|EEO60866.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           9_1_42FAA]
          Length = 349

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +  +    M+ E    EI +    +     GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWGQYVIGDNIQGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115
               E Y+Q++ N R   +G  PL  Y EN        W+S+  +    K +FFE + T 
Sbjct: 281 RKMIEDYIQYLGNLRWSSLGFGPL--YEENHKEPESMHWVSQYSNANMVKTDFFEAKSTA 338

Query: 116 YQQGAELKWD 125
           Y +   L+ D
Sbjct: 339 YAKSTALEDD 348


>gi|150005609|ref|YP_001300353.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           vulgatus ATCC 8482]
 gi|254884474|ref|ZP_05257184.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           4_3_47FAA]
 gi|294778581|ref|ZP_06744003.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides
           vulgatus PC510]
 gi|319640834|ref|ZP_07995547.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_1_40A]
 gi|149934033|gb|ABR40731.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
           vulgatus ATCC 8482]
 gi|254837267|gb|EET17576.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           4_3_47FAA]
 gi|294447530|gb|EFG16108.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides
           vulgatus PC510]
 gi|317387646|gb|EFV68512.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_1_40A]
          Length = 349

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +  +    M+ E    EI +    +     GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWGQYVIGDNIQGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115
               E Y+Q++ N R   +G  PL  Y EN        W+S+  +    K +FFE + T 
Sbjct: 281 RKMIEDYIQYLGNLRWSSLGFGPL--YEENHKEPESMHWVSQYSNANMVKTDFFEAKSTA 338

Query: 116 YQQGAELKWD 125
           Y +   L+ D
Sbjct: 339 YAKSTALEDD 348


>gi|255954081|ref|XP_002567793.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211589504|emb|CAP95650.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 400

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH +F   + +       H+  +   +    ++ EA  +E  +  + +P   +G+N
Sbjct: 264 RDEGLHTDFACLLFS-------HMNHRPDPKVVEEIIVEAVGIEQEFLTDALPCALLGMN 316

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
           +    QY++F+A+R    +G +  +  + NPF +M E I L  + NFFE RV +YQ+  
Sbjct: 317 SKLMCQYIEFVADRLLVALGNKKYYN-SANPFDFM-ESISLAGKTNFFEKRVGDYQKAG 373


>gi|299144102|ref|ZP_07037182.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           sp. oral taxon 386 str. F0131]
 gi|298518587|gb|EFI42326.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           sp. oral taxon 386 str. F0131]
          Length = 346

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E   L+T+E   + + ML E    EI +    +     G+ 
Sbjct: 218 RDENTHLWLFRNIIQELKKEEVELFTEERINEYKCMLMEGVRQEIEWGQYVIGDNIQGIT 277

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEK-NFFETRVTEYQ 117
           A   + Y++++ N R   IG   LF       N   W+SE  +  + K +FFE +V+ Y 
Sbjct: 278 AQMVKDYIEYLGNLRSRSIGFGNLFDRNIEEPNSMKWVSEYSNPNEIKTDFFEGKVSAYS 337

Query: 118 QGAELKWD 125
           + +  + D
Sbjct: 338 KSSVFEDD 345


>gi|254523600|ref|ZP_05135655.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
 gi|219721191|gb|EED39716.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
          Length = 346

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  ENP L T E           A  LE  ++ E +  G  G++
Sbjct: 218 RDELAHTKFISELIRAIIGENPELQTNELTAYVHQAFEHAIELETQWSSEVL-DGIDGID 276

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
                +Y+++ AN+    +G+E L+   T+N  PW+    D   + + +FFE R   Y++
Sbjct: 277 VEEMTRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336


>gi|229816571|ref|ZP_04446870.1| hypothetical protein COLINT_03629 [Collinsella intestinalis DSM
           13280]
 gi|229807906|gb|EEP43709.1| hypothetical protein COLINT_03629 [Collinsella intestinalis DSM
           13280]
          Length = 352

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 4/125 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL     +I +++ E P L++ E     R ML E    EIA+    +     GL 
Sbjct: 224 RDENTHLWLFRSIILELQKEEPQLFSNENVTMLREMLEEGVRQEIAWGRYVLGDAIPGLT 283

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK-NFFETRVTEYQ 117
               E Y++++ N R   +G   L++ Y   P    W+S+  +    K +FFE + T Y 
Sbjct: 284 GDMVEGYIKYLGNLRWSSLGFGQLYEGYRTEPADMAWVSQYSNANMVKTDFFEAKSTAYA 343

Query: 118 QGAEL 122
           +   L
Sbjct: 344 KSTAL 348


>gi|228861726|ref|YP_002854746.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
 gi|226425174|gb|ACO53586.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
          Length = 339

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 6/117 (5%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE LH NF     N+   E+  L +    ++   M  EA  +E  +    +P   +G+N
Sbjct: 215 RDEGLHTNFACLYYNEYIPEHDKLSS----ERILDMFIEAVEIEKEFFKTALPCSLLGMN 270

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
             S  +Y++F+A+R    +  +P      NPF +M+  I ++ + NFFE RV EY++
Sbjct: 271 TESMCRYIEFVADRLLVDLN-QPKHFMASNPFNFMTN-ISMEGKTNFFERRVGEYRR 325


>gi|50288235|ref|XP_446546.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525854|emb|CAG59473.1| unnamed protein product [Candida glabrata]
          Length = 335

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RD   + +F   +         HL TK   +    ++ EA  +E A+   +MP   +G++
Sbjct: 202 RDRGFYADFACLLF-------AHLKTKPNPKIIEQIITEAVEIEKAHYRNSMPIEKLGMD 254

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
               +QY++ +A++     G E  +  T NPFP+M E   + K  NFFE +V++YQ+ +
Sbjct: 255 LKEIDQYIESVADKLLVSFGNEKFYNAT-NPFPFMEEATSIGK-TNFFEKKVSDYQKAS 311


>gi|265756566|ref|ZP_06090772.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           3_1_33FAA]
 gi|263233754|gb|EEZ19369.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           3_1_33FAA]
          Length = 349

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ HL    ++I ++K E P L+T +  +    M+ E    EI +    +     GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWGQYVIGDNIQGLN 280

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKKEK-NFFETRVTE 115
               E Y+Q++ N R   +G  PL  Y EN        W+S+  +    K +FFE + T 
Sbjct: 281 WKMIEDYIQYLGNLRWSSLGFGPL--YEENHKEPESMHWVSQYSNANMVKTDFFEAKSTA 338

Query: 116 YQQGAELKWD 125
           Y +   L+ D
Sbjct: 339 YAKSTALEDD 348


>gi|294955280|ref|XP_002788462.1| ribonucleoside-diphosphate reductase small chain, putative
           [Perkinsus marinus ATCC 50983]
 gi|239903931|gb|EER20258.1| ribonucleoside-diphosphate reductase small chain, putative
           [Perkinsus marinus ATCC 50983]
          Length = 157

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 39  HEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 98
           + A  +E  +  + +P G +G+NA    +Y++F+A+R    +G   ++  + NPF WM+ 
Sbjct: 36  NSAVNVEREFITDALPVGLIGMNAELMGRYIEFVADRLLVALGYAKIYN-SANPFDWMT- 93

Query: 99  VIDLKKEKNFFETRV 113
           +I L+ + NFFE RV
Sbjct: 94  MISLQGKTNFFEKRV 108


>gi|167461830|ref|ZP_02326919.1| ribonucleoside-diphosphate reductase beta subunit [Paenibacillus
           larvae subsp. larvae BRL-230010]
 gi|322383591|ref|ZP_08057349.1| ribonucleotide-diphosphate reductase subunit beta-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
 gi|321152059|gb|EFX44995.1| ribonucleotide-diphosphate reductase subunit beta-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
          Length = 343

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 4/123 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ H  F  +V   +  + P L T E  Q     + +A  LE  +AH  + +   G++
Sbjct: 215 RDEAQHAYFFGEVFKLLLTDFPELNTSERIQYVYDTIDQAVKLEEKWAHYVLNQ-IDGID 273

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID--LKKEK-NFFETRVTEYQQ 118
                +Y++FIAN+R   +GL+P ++  +N  PW+    D  L + K +FFE +   Y +
Sbjct: 274 LDDFSRYIRFIANKRLKTMGLQPAYEGVDNCMPWIRPFSDEALNQTKTDFFEAKSRTYAK 333

Query: 119 GAE 121
            ++
Sbjct: 334 VSD 336


>gi|253574542|ref|ZP_04851883.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. oral taxon 786 str. D14]
 gi|251846247|gb|EES74254.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. oral taxon 786 str. D14]
          Length = 343

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 5/119 (4%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE+ H  F  +V  Q+ I+ P L TKE    +   +  A  LE  +AH T+ K   G++
Sbjct: 214 RDENQHCYFFAEVFKQLLIDYPELNTKENIDYAYRTIDRAVELETNWAHYTL-KNVPGID 272

Query: 62  APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEK-NFFETRVTEY 116
                 Y+++IAN+R   +GLE  +   + N  PW+    D  L   K +FFE +   Y
Sbjct: 273 LNELSDYIKYIANKRLTLMGLEKAYAGVDINCMPWIKPFSDEALNATKTDFFEAKSRNY 331


>gi|218442220|ref|YP_002380549.1| ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 7424]
 gi|218174948|gb|ACK73681.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 7424]
          Length = 355

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 13/132 (9%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H+     +I +     PH   + ++     M   A   E  + +  +    +G+ 
Sbjct: 227 RDELSHVRLYQRIIVEAMETFPHSVEQIYE-----MFDTAVQHECRWTNHIVGDNILGIT 281

Query: 62  APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE----KNFFETRVT 114
             S EQY +++AN R + IGL+PL+   KY ++P+  +    D KK+     NFFE  VT
Sbjct: 282 ESSTEQYTKYLANHRLNTIGLKPLYEDEKYKKSPYSHLERFSDTKKDAHTKANFFEATVT 341

Query: 115 EYQQGAELK-WD 125
            Y   + +  WD
Sbjct: 342 SYVMSSGVTGWD 353


>gi|194366071|ref|YP_002028681.1| ribonucleotide-diphosphate reductase subunit beta [Stenotrophomonas
           maltophilia R551-3]
 gi|194348875|gb|ACF51998.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
           R551-3]
          Length = 346

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 4/120 (3%)

Query: 2   RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
           RDE  H  F  ++I  I  ENP L T E           A  LE  ++ E +  G  G++
Sbjct: 218 RDELAHTKFISELIRAIIGENPELQTNELTAYVHQSFEHAIELET