BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780136|ref|YP_003064549.1| ribonucleotide-diphosphate
reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62]
(125 letters)
Database: nr
13,984,884 sequences; 4,792,584,752 total letters
Searching..................................................done
>gi|260220050|emb|CBA27200.1| Ribonucleoside-diphosphate reductase subunit alpha [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 1306
Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQ+K+ENPHLWT EF+ + + + +A LE YA +TMP+G +G+
Sbjct: 1182 LRDESMHCNFGIDLINQLKLENPHLWTPEFKAEIKALFEKAVELEYRYAEDTMPRGVLGM 1241
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGLEPLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 1242 NASMFKGYLRYIANRRATQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 1301
Query: 121 ELKWD 125
L WD
Sbjct: 1302 ALSWD 1306
>gi|288941383|ref|YP_003443623.1| Ribonucleoside-diphosphate reductase [Allochromatium vinosum DSM
180]
gi|288896755|gb|ADC62591.1| Ribonucleoside-diphosphate reductase [Allochromatium vinosum DSM
180]
Length = 458
Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats.
Identities = 86/125 (68%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H+NFGIDVINQIKIENPHLWT EF+Q+ M+ EA LE YAH+TMP+G +GL
Sbjct: 334 LRDESMHMNFGIDVINQIKIENPHLWTPEFRQELVGMIREAVELEARYAHDTMPRGVLGL 393
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y+ FIANRRC QIGL + NPFPWMSEV+DLKKEKNFFETRVTEYQ G
Sbjct: 394 NAQMFEDYLHFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 453
Query: 121 ELKWD 125
L WD
Sbjct: 454 ALNWD 458
>gi|209521089|ref|ZP_03269819.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. H160]
gi|209498472|gb|EDZ98597.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. H160]
Length = 411
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 287 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRAIFQQAVELEYRYAEDTMPRGVLGL 346
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406
Query: 121 ELKWD 125
L W+
Sbjct: 407 ALSWE 411
>gi|187479453|ref|YP_787478.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella avium
197N]
gi|115424040|emb|CAJ50593.1| ribonucleoside-diphosphate reductase beta chain [Bordetella avium
197N]
Length = 394
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 101/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+IN IK+ENPHLWT EF+++ R + +A LE AYA +TMP+G +GL
Sbjct: 270 LRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 329
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FIANRRC QIG+EPL+ ENPFPWM+E+IDLKKE+NFFETRV EYQ G
Sbjct: 330 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 389
Query: 121 ELKWD 125
L W+
Sbjct: 390 TLSWE 394
>gi|295677726|ref|YP_003606250.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1002]
gi|295437569|gb|ADG16739.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1002]
Length = 411
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 287 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRAIFQQAVELEYRYAEDTMPRGVLGL 346
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406
Query: 121 ELKWD 125
L W+
Sbjct: 407 ALSWE 411
>gi|83746810|ref|ZP_00943858.1| Ribonucleoside-diphosphate reductase beta chain [Ralstonia
solanacearum UW551]
gi|207721465|ref|YP_002251905.1| transmembrane ribonucleoside reductase (small chain) protein
[Ralstonia solanacearum MolK2]
gi|83726579|gb|EAP73709.1| Ribonucleoside-diphosphate reductase beta chain [Ralstonia
solanacearum UW551]
gi|206586625|emb|CAQ17211.1| transmembrane ribonucleoside reductase (small chain) protein
[Ralstonia solanacearum MolK2]
Length = 402
Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 83/125 (66%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL
Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FI NRRC QIGLEPLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 338 NAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397
Query: 121 ELKWD 125
L WD
Sbjct: 398 ALSWD 402
>gi|300703002|ref|YP_003744604.1| ribonucleoside diphosphate reductase 1 subunit beta, ferritin-like
[Ralstonia solanacearum CFBP2957]
gi|299070665|emb|CBJ41960.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
[Ralstonia solanacearum CFBP2957]
Length = 402
Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 83/125 (66%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL
Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FI NRRC QIGLEPLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 338 NAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397
Query: 121 ELKWD 125
L WD
Sbjct: 398 ALSWD 402
>gi|207744360|ref|YP_002260752.1| transmembrane ribonucleoside reductase (small chain) protein
[Ralstonia solanacearum IPO1609]
gi|206595765|emb|CAQ62692.1| transmembrane ribonucleoside reductase (small chain) protein
[Ralstonia solanacearum IPO1609]
Length = 410
Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 83/125 (66%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL
Sbjct: 286 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 345
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FI NRRC QIGLEPLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 346 NAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 405
Query: 121 ELKWD 125
L WD
Sbjct: 406 ALSWD 410
>gi|313200886|ref|YP_004039544.1| ribonucleoside-diphosphate reductase [Methylovorus sp. MP688]
gi|312440202|gb|ADQ84308.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. MP688]
Length = 381
Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 75/125 (60%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+IN +K+ENPHLWT EF+++ + ++ +A LE YA +TMP+G +GL
Sbjct: 257 LRDESMHCNFGIDLINTLKLENPHLWTPEFREEIKRLMQQAVELEYRYAEDTMPRGVLGL 316
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA ++Y++FIANRR QIG++ L+ NPFPWMSE++DLKKEKNFFETRVTEYQ G
Sbjct: 317 NAAMFKEYLRFIANRRMQQIGIDALYPGASNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 376
Query: 121 ELKWD 125
L WD
Sbjct: 377 ALSWD 381
>gi|307731037|ref|YP_003908261.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1003]
gi|307585572|gb|ADN58970.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1003]
Length = 411
Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 287 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 346
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406
Query: 121 ELKWD 125
L W+
Sbjct: 407 ALTWE 411
>gi|253998799|ref|YP_003050862.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. SIP3-4]
gi|253985478|gb|ACT50335.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. SIP3-4]
Length = 383
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 75/125 (60%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+IN +K+ENPHLWT EF+++ + ++ +A LE YA +TMP+G +GL
Sbjct: 259 LRDESMHCNFGIDLINTLKLENPHLWTPEFREEIKRLMQQAVELEYRYAEDTMPRGVLGL 318
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA ++Y++FIANRR QIG++ L+ NPFPWMSE++DLKKEKNFFETRVTEYQ G
Sbjct: 319 NAAMFKEYLRFIANRRMQQIGIDALYPGASNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 378
Query: 121 ELKWD 125
L WD
Sbjct: 379 ALSWD 383
>gi|161525957|ref|YP_001580969.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
multivorans ATCC 17616]
gi|160343386|gb|ABX16472.1| Ribonucleoside-diphosphate reductase [Burkholderia multivorans ATCC
17616]
Length = 396
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 272 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 331
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 332 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 391
Query: 121 ELKWD 125
L W+
Sbjct: 392 ALSWE 396
>gi|33593916|ref|NP_881560.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
pertussis Tohama I]
gi|33598411|ref|NP_886054.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
parapertussis 12822]
gi|33603351|ref|NP_890911.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
bronchiseptica RB50]
gi|33563990|emb|CAE43255.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
pertussis Tohama I]
gi|33574540|emb|CAE39187.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
parapertussis]
gi|33577475|emb|CAE34740.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
bronchiseptica RB50]
Length = 398
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 81/125 (64%), Positives = 101/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+IN IK+ENPHLWT EF+++ R + +A LE AYA +TMP+G +GL
Sbjct: 274 LRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 333
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FIANRRC QIG+EPLF ENPFPWM+E+IDLKKE+NFFETRV EYQ G
Sbjct: 334 NAPMFKSYLRFIANRRCQQIGIEPLFPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 393
Query: 121 ELKWD 125
L W+
Sbjct: 394 TLSWE 398
>gi|91785256|ref|YP_560462.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
xenovorans LB400]
gi|91689210|gb|ABE32410.1| Ribonucleoside-diphosphate reductase [Burkholderia xenovorans
LB400]
Length = 411
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 287 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 346
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 347 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 406
Query: 121 ELKWD 125
L W+
Sbjct: 407 ALTWE 411
>gi|254253304|ref|ZP_04946622.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
dolosa AUO158]
gi|124895913|gb|EAY69793.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
dolosa AUO158]
Length = 403
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 339 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398
Query: 121 ELKWD 125
L W+
Sbjct: 399 ALSWE 403
>gi|296160506|ref|ZP_06843322.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. Ch1-1]
gi|295889255|gb|EFG69057.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. Ch1-1]
Length = 415
Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 291 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 350
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 351 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 410
Query: 121 ELKWD 125
L W+
Sbjct: 411 ALTWE 415
>gi|113869188|ref|YP_727677.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
eutropha H16]
gi|113527964|emb|CAJ94309.1| Ribonucleoside-diphosphate reductase beta subunit [Ralstonia
eutropha H16]
Length = 395
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 81/125 (64%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL
Sbjct: 271 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 330
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 331 NAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 390
Query: 121 ELKWD 125
L WD
Sbjct: 391 ALSWD 395
>gi|163854887|ref|YP_001629185.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
petrii DSM 12804]
gi|163258615|emb|CAP40914.1| ribonucleoside-diphosphate reductase beta chain [Bordetella petrii]
Length = 396
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 101/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+IN IK+ENPHLWT EF+++ R + +A LE AYA +TMP+G +GL
Sbjct: 272 LRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRGLFQKAVELEYAYAEDTMPRGVLGL 331
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FIANRRC QIG+EPL+ ENPFPWM+E+IDLKKE+NFFETRV EYQ G
Sbjct: 332 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 391
Query: 121 ELKWD 125
L W+
Sbjct: 392 TLSWE 396
>gi|94312018|ref|YP_585228.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus
metallidurans CH34]
gi|93355870|gb|ABF09959.1| Ribonucleoside-diphosphate reductase beta subunit [Cupriavidus
metallidurans CH34]
Length = 395
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 81/125 (64%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL
Sbjct: 271 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 330
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 331 NAPMFKGYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 390
Query: 121 ELKWD 125
L WD
Sbjct: 391 ALSWD 395
>gi|78065156|ref|YP_367925.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia sp.
383]
gi|77965901|gb|ABB07281.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. 383]
Length = 403
Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398
Query: 121 ELKWD 125
L W+
Sbjct: 399 ALSWE 403
>gi|170699976|ref|ZP_02891003.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
IOP40-10]
gi|170135124|gb|EDT03425.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
IOP40-10]
Length = 403
Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398
Query: 121 ELKWD 125
L W+
Sbjct: 399 ALSWE 403
>gi|115350552|ref|YP_772391.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
ambifaria AMMD]
gi|172059584|ref|YP_001807236.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
ambifaria MC40-6]
gi|115280540|gb|ABI86057.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria AMMD]
gi|171992101|gb|ACB63020.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
MC40-6]
Length = 403
Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398
Query: 121 ELKWD 125
L W+
Sbjct: 399 ALSWE 403
>gi|73542624|ref|YP_297144.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
eutropha JMP134]
gi|72120037|gb|AAZ62300.1| Ribonucleoside-diphosphate reductase [Ralstonia eutropha JMP134]
Length = 394
Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats.
Identities = 81/125 (64%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL
Sbjct: 270 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 329
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 330 NAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 389
Query: 121 ELKWD 125
L WD
Sbjct: 390 ALSWD 394
>gi|171318520|ref|ZP_02907672.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MEX-5]
gi|171096306|gb|EDT41212.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MEX-5]
Length = 403
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398
Query: 121 ELKWD 125
L W+
Sbjct: 399 ALSWE 403
>gi|312795100|ref|YP_004028022.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
rhizoxinica HKI 454]
gi|312166875|emb|CBW73878.1| Ribonucleoside-diphosphate reductase beta chain (EC 1.17.4.1)
[Burkholderia rhizoxinica HKI 454]
Length = 416
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 96/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT F+++ + A LE YA +TMP+G +GL
Sbjct: 292 LRDESMHCNFGIDLINQIKLENPHLWTPAFREEICGLFKHAVELEYRYAEDTMPRGVLGL 351
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI NRRC QIGLEPLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 352 NAGMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 411
Query: 121 ELKWD 125
L W+
Sbjct: 412 ALSWE 416
>gi|34497739|ref|NP_901954.1| ribonucleotide-diphosphate reductase subunit beta [Chromobacterium
violaceum ATCC 12472]
gi|34103595|gb|AAQ59956.1| ribonucleoside-diphosphate reductase system [Chromobacterium
violaceum ATCC 12472]
Length = 360
Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 96/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+IN IK+ENP LWT F+ + + +A LE AYA +TMP+G +GL
Sbjct: 236 LRDESMHCNFGIDLINTIKLENPLLWTDSFKAEIVDLFKQAVELEYAYAEDTMPRGVLGL 295
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA ++Y++FIANRR QIGL+PLF NPFPWMSE+IDLKKEKNFFETRVTEYQ G
Sbjct: 296 NASMFKEYLRFIANRRMQQIGLDPLFPGVNNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 355
Query: 121 ELKWD 125
L WD
Sbjct: 356 ALSWD 360
>gi|92112799|ref|YP_572727.1| ribonucleotide-diphosphate reductase subunit beta [Chromohalobacter
salexigens DSM 3043]
gi|91795889|gb|ABE58028.1| Ribonucleoside-diphosphate reductase [Chromohalobacter salexigens
DSM 3043]
Length = 420
Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats.
Identities = 82/125 (65%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFG+D+INQIKIENPHLWT EFQ + M+ E T LEIAYA ++MP+G +G+
Sbjct: 296 LRDESMHLNFGVDMINQIKIENPHLWTPEFQDEVTQMIIEGTELEIAYARDSMPRGVLGM 355
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+ FI NRR QIGL+ + ENPFPWMSE+IDL+KEKNFFETRVTEYQ G
Sbjct: 356 NAAIMEEYLHFICNRRLAQIGLKEQYPGAENPFPWMSEIIDLRKEKNFFETRVTEYQVGG 415
Query: 121 ELKWD 125
L WD
Sbjct: 416 ALSWD 420
>gi|187925407|ref|YP_001897049.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
phytofirmans PsJN]
gi|187716601|gb|ACD17825.1| Ribonucleoside-diphosphate reductase [Burkholderia phytofirmans
PsJN]
Length = 415
Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 291 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 350
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 351 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 410
Query: 121 ELKWD 125
L W+
Sbjct: 411 ALTWE 415
>gi|189349324|ref|YP_001944952.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
multivorans ATCC 17616]
gi|221213238|ref|ZP_03586213.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
multivorans CGD1]
gi|189333346|dbj|BAG42416.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
multivorans ATCC 17616]
gi|221166690|gb|EED99161.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
multivorans CGD1]
Length = 403
Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 339 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398
Query: 121 ELKWD 125
L W+
Sbjct: 399 ALSWE 403
>gi|170731918|ref|YP_001763865.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
cenocepacia MC0-3]
gi|169815160|gb|ACA89743.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia
MC0-3]
Length = 403
Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398
Query: 121 ELKWD 125
L W+
Sbjct: 399 ALSWE 403
>gi|134294683|ref|YP_001118418.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
vietnamiensis G4]
gi|134137840|gb|ABO53583.1| Ribonucleoside-diphosphate reductase [Burkholderia vietnamiensis
G4]
Length = 403
Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVELEYRYAEDTMPRGVLGL 338
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398
Query: 121 ELKWD 125
L W+
Sbjct: 399 ALSWE 403
>gi|170695324|ref|ZP_02886470.1| Ribonucleoside-diphosphate reductase [Burkholderia graminis C4D1M]
gi|170139724|gb|EDT07906.1| Ribonucleoside-diphosphate reductase [Burkholderia graminis C4D1M]
Length = 414
Score = 160 bits (404), Expect = 8e-38, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 290 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 349
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 350 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 409
Query: 121 ELKWD 125
L W+
Sbjct: 410 ALTWE 414
>gi|238026167|ref|YP_002910398.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
glumae BGR1]
gi|237875361|gb|ACR27694.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
glumae BGR1]
Length = 407
Score = 160 bits (404), Expect = 8e-38, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL
Sbjct: 283 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKRAVELEYRYAEDTMPRGVLGL 342
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FIANRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 343 NAAMFKSYLRFIANRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 402
Query: 121 ELKWD 125
L W+
Sbjct: 403 ALSWE 407
>gi|186477386|ref|YP_001858856.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
phymatum STM815]
gi|184193845|gb|ACC71810.1| Ribonucleoside-diphosphate reductase [Burkholderia phymatum STM815]
Length = 407
Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL
Sbjct: 283 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIREIFKHAVDLEYRYAEDTMPRGVLGL 342
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI NRRC QIG++PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 343 NASMFKSYLRFICNRRCQQIGIDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 402
Query: 121 ELKWD 125
L W+
Sbjct: 403 ALSWE 407
>gi|107021673|ref|YP_620000.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
cenocepacia AU 1054]
gi|116688619|ref|YP_834242.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
cenocepacia HI2424]
gi|105891862|gb|ABF75027.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia AU
1054]
gi|116646708|gb|ABK07349.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia
HI2424]
Length = 382
Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 258 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 317
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI+NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 318 NASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 377
Query: 121 ELKWD 125
L W+
Sbjct: 378 ALSWE 382
>gi|317402620|gb|EFV83180.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
xylosoxidans C54]
Length = 399
Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 101/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+IN +K+ENPHLWT EF+++ R + +A LE AYA +TMP+G +GL
Sbjct: 275 LRDESMHCNFGIDLINTVKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 334
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FIANRRC QIG+EPL+ ENPFPWM+E+IDLKKE+NFFETRV EYQ G
Sbjct: 335 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 394
Query: 121 ELKWD 125
L W+
Sbjct: 395 TLSWE 399
>gi|221202418|ref|ZP_03575450.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
multivorans CGD2M]
gi|221208122|ref|ZP_03581127.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
multivorans CGD2]
gi|221172025|gb|EEE04467.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
multivorans CGD2]
gi|221177695|gb|EEE10110.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
multivorans CGD2M]
Length = 372
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 248 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 307
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 308 NASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 367
Query: 121 ELKWD 125
L W+
Sbjct: 368 ALSWE 372
>gi|323527395|ref|YP_004229548.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1001]
gi|323384397|gb|ADX56488.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1001]
Length = 414
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 290 LRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYAEDTMPRGVLGL 349
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 350 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 409
Query: 121 ELKWD 125
L W+
Sbjct: 410 ALTWE 414
>gi|206561765|ref|YP_002232530.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
cenocepacia J2315]
gi|254246390|ref|ZP_04939711.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
cenocepacia PC184]
gi|124871166|gb|EAY62882.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
cenocepacia PC184]
gi|198037807|emb|CAR53751.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
cenocepacia J2315]
Length = 403
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398
Query: 121 ELKWD 125
L W+
Sbjct: 399 ALSWE 403
>gi|224825450|ref|ZP_03698555.1| Ribonucleoside-diphosphate reductase [Lutiella nitroferrum 2002]
gi|224602371|gb|EEG08549.1| Ribonucleoside-diphosphate reductase [Lutiella nitroferrum 2002]
Length = 360
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 96/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+IN +K ENP LWT+EF+ + + A LE AYA +TMP+G +GL
Sbjct: 236 LRDESMHCNFGIDLINTVKQENPQLWTEEFKAEITGLFKHAVELEYAYAEDTMPRGVLGL 295
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA ++Y++FIANRR QIGLEP+F NPFPWMSE+IDLKKEKNFFETRVTEYQ G
Sbjct: 296 NAAMFKEYLRFIANRRMQQIGLEPMFPGVTNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 355
Query: 121 ELKWD 125
L WD
Sbjct: 356 ALSWD 360
>gi|325519933|gb|EGC99191.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia sp.
TJI49]
Length = 403
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYAEDTMPRGVLGL 338
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398
Query: 121 ELKWD 125
L W+
Sbjct: 399 ALSWE 403
>gi|226940720|ref|YP_002795794.1| ribonucleotide-diphosphate reductase subunit beta [Laribacter
hongkongensis HLHK9]
gi|226715647|gb|ACO74785.1| Ribonucleoside-diphosphate reductase beta chain [Laribacter
hongkongensis HLHK9]
Length = 357
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 83/125 (66%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+IN IK ENPHLWT EFQ++ + +A LE AYA +TMP+G +GL
Sbjct: 233 LRDESMHCNFGIDLINSIKQENPHLWTVEFQEELYGLFRKAIDLEYAYAEDTMPRGVLGL 292
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA ++Y+ FIANRR QIGLEPLF + +NPFPWMSE+IDLKKEKNFFETRVTEYQ G
Sbjct: 293 NAAMFKEYLDFIANRRMQQIGLEPLFTHVDNPFPWMSEMIDLKKEKNFFETRVTEYQSGG 352
Query: 121 ELKWD 125
L WD
Sbjct: 353 ALDWD 357
>gi|293603286|ref|ZP_06685715.1| ribonucleotide-diphosphate reductase subunit beta subunit
[Achromobacter piechaudii ATCC 43553]
gi|292818321|gb|EFF77373.1| ribonucleotide-diphosphate reductase subunit beta subunit
[Achromobacter piechaudii ATCC 43553]
Length = 398
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 100/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+IN +K+ENPHLWT F+++ R + +A LE AYA +TMP+G +GL
Sbjct: 274 LRDESMHCNFGIDLINTVKLENPHLWTPAFREEIRELFRKAVELEYAYAEDTMPRGVLGL 333
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FIANRRC QIG+EPL+ ENPFPWM+E+IDLKKE+NFFETRV EYQ G
Sbjct: 334 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 393
Query: 121 ELKWD 125
L W+
Sbjct: 394 TLSWE 398
>gi|149927167|ref|ZP_01915424.1| ribonucleotide-diphosphate reductase beta subunit [Limnobacter sp.
MED105]
gi|149824106|gb|EDM83327.1| ribonucleotide-diphosphate reductase beta subunit [Limnobacter sp.
MED105]
Length = 399
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 74/125 (59%), Positives = 94/125 (75%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES H FGID+IN +K+ENPHLWT EF+++ + M +A LE AYA +TMP+G +GL
Sbjct: 275 LRDESAHCTFGIDLINTVKLENPHLWTPEFKEEIKAMFRKAVELEHAYAVDTMPRGVLGL 334
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
N+ +YM+FI NRR +QIGL L++ NPFPWMSE++DLKKE NFFE RVTEYQ G
Sbjct: 335 NSAQFMEYMKFICNRRSNQIGLGTLYEGATNPFPWMSEMMDLKKETNFFERRVTEYQTGG 394
Query: 121 ELKWD 125
L WD
Sbjct: 395 ALSWD 399
>gi|121598515|ref|YP_991780.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
mallei SAVP1]
gi|124385654|ref|YP_001027273.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
mallei NCTC 10229]
gi|126439848|ref|YP_001060484.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
pseudomallei 668]
gi|126451145|ref|YP_001082790.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
mallei NCTC 10247]
gi|126453692|ref|YP_001067748.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
pseudomallei 1106a]
gi|134280207|ref|ZP_01766918.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei 305]
gi|166998593|ref|ZP_02264451.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
mallei PRL-20]
gi|167721297|ref|ZP_02404533.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
pseudomallei DM98]
gi|167740266|ref|ZP_02413040.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
pseudomallei 14]
gi|167817486|ref|ZP_02449166.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
pseudomallei 91]
gi|167847373|ref|ZP_02472881.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
pseudomallei B7210]
gi|167895962|ref|ZP_02483364.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
pseudomallei 7894]
gi|167904346|ref|ZP_02491551.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
pseudomallei NCTC 13177]
gi|167912606|ref|ZP_02499697.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
pseudomallei 112]
gi|217420440|ref|ZP_03451945.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei 576]
gi|226196790|ref|ZP_03792369.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei Pakistan 9]
gi|237813879|ref|YP_002898330.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei MSHR346]
gi|238561262|ref|ZP_00442338.2| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
mallei GB8 horse 4]
gi|242316188|ref|ZP_04815204.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei 1106b]
gi|254178822|ref|ZP_04885476.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
mallei ATCC 10399]
gi|254199038|ref|ZP_04905453.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei S13]
gi|254202774|ref|ZP_04909137.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
mallei FMH]
gi|254259655|ref|ZP_04950709.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei 1710a]
gi|254299327|ref|ZP_04966777.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei 406e]
gi|121227325|gb|ABM49843.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
mallei SAVP1]
gi|124293674|gb|ABN02943.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
mallei NCTC 10229]
gi|126219341|gb|ABN82847.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei 668]
gi|126227334|gb|ABN90874.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei 1106a]
gi|126244015|gb|ABO07108.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
mallei NCTC 10247]
gi|134248214|gb|EBA48297.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei 305]
gi|147747021|gb|EDK54098.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
mallei FMH]
gi|157808756|gb|EDO85926.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei 406e]
gi|160694736|gb|EDP84744.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
mallei ATCC 10399]
gi|169656868|gb|EDS88265.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei S13]
gi|217395852|gb|EEC35869.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei 576]
gi|225931050|gb|EEH27058.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei Pakistan 9]
gi|237506031|gb|ACQ98349.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei MSHR346]
gi|238524965|gb|EEP88395.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
mallei GB8 horse 4]
gi|242139427|gb|EES25829.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei 1106b]
gi|243065276|gb|EES47462.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
mallei PRL-20]
gi|254218344|gb|EET07728.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei 1710a]
Length = 403
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 338
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 339 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398
Query: 121 ELKWD 125
L W+
Sbjct: 399 ALSWE 403
>gi|167586060|ref|ZP_02378448.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
ubonensis Bu]
Length = 403
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + +A LE YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVDLEYRYAEDTMPRGVLGL 338
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI NRRC QIGL+PL+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 339 NASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 398
Query: 121 ELKWD 125
L W+
Sbjct: 399 ALSWE 403
>gi|330430727|gb|AEC22061.1| ribonucleoside-diphosphate reductase beta chain [Pusillimonas sp.
T7-7]
Length = 387
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 81/125 (64%), Positives = 100/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+IN IK+ENPHLWT EF+++ R + +A LE AYA +TMP+G +GL
Sbjct: 263 LRDESMHCNFGIDLINTIKLENPHLWTAEFREELRELFKKAVDLEYAYAEDTMPRGVLGL 322
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FIANRRC QIGLEPLF ENPFPWM+E+IDLKKE+NFFETRV EYQ G
Sbjct: 323 NASMFKSYLRFIANRRCQQIGLEPLFGQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 382
Query: 121 ELKWD 125
L W+
Sbjct: 383 ALSWE 387
>gi|297538242|ref|YP_003674011.1| Ribonucleoside-diphosphate reductase [Methylotenera sp. 301]
gi|297257589|gb|ADI29434.1| Ribonucleoside-diphosphate reductase [Methylotenera sp. 301]
Length = 376
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGIDVIN IK+ENPHLWT EF+++ +T++ + LE YA TMP+G +GL
Sbjct: 252 LRDESMHCNFGIDVINTIKLENPHLWTAEFREEIKTLMQKGVELEYQYAEATMPRGVLGL 311
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA ++Y++FIANRRC QIGL+ L+ NPFPWMSE++DLKKEKNFFETRVTEYQ G
Sbjct: 312 NATMFKEYLRFIANRRCTQIGLDVLYPGATNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 371
Query: 121 ELKWD 125
L WD
Sbjct: 372 ALSWD 376
>gi|83719302|ref|YP_441701.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
thailandensis E264]
gi|83653127|gb|ABC37190.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
thailandensis E264]
Length = 377
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL
Sbjct: 253 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 312
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 313 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 372
Query: 121 ELKWD 125
L W+
Sbjct: 373 ALSWE 377
>gi|254780845|ref|YP_003065258.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
Liberibacter asiaticus str. psy62]
gi|254780964|ref|YP_003065377.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
Liberibacter asiaticus str. psy62]
gi|254040522|gb|ACT57318.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
Liberibacter asiaticus str. psy62]
gi|254040641|gb|ACT57437.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
Liberibacter asiaticus str. psy62]
Length = 352
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 125/125 (100%), Positives = 125/125 (100%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL
Sbjct: 228 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 287
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA
Sbjct: 288 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 347
Query: 121 ELKWD 125
ELKWD
Sbjct: 348 ELKWD 352
>gi|17547523|ref|NP_520925.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
solanacearum GMI1000]
gi|17429827|emb|CAD16511.1| putative transmembrane ribonucleoside reductase (small chain)
oxidoreductase protein [Ralstonia solanacearum GMI1000]
Length = 400
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL
Sbjct: 276 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 335
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FI NRRC QIGL+ LF +NPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 336 NAPMFKGYLRFICNRRCQQIGLDALFPNEDNPFPWMSEMIDLKKERNFFETRVIEYQTGG 395
Query: 121 ELKWD 125
L WD
Sbjct: 396 ALSWD 400
>gi|299065648|emb|CBJ36820.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
[Ralstonia solanacearum CMR15]
Length = 398
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL
Sbjct: 274 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 333
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FI NRRC QIGL+ LF +NPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 334 NAPMFKGYLRFICNRRCQQIGLDALFPNEDNPFPWMSEMIDLKKERNFFETRVIEYQTGG 393
Query: 121 ELKWD 125
L WD
Sbjct: 394 ALSWD 398
>gi|76808925|ref|YP_334881.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
pseudomallei 1710b]
gi|254208116|ref|ZP_04914466.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
mallei JHU]
gi|76578378|gb|ABA47853.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
pseudomallei 1710b]
gi|147752010|gb|EDK59077.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
mallei JHU]
Length = 376
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL
Sbjct: 252 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 311
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 312 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 371
Query: 121 ELKWD 125
L W+
Sbjct: 372 ALSWE 376
>gi|311103857|ref|YP_003976710.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
xylosoxidans A8]
gi|310758546|gb|ADP13995.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
xylosoxidans A8]
Length = 399
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 101/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+IN +K+ENPHLWT EF+++ R + +A LE AYA +TMP+G +GL
Sbjct: 275 LRDESMHCNFGIDLINTVKLENPHLWTPEFREEIRELFRKAVELEYAYAEDTMPRGVLGL 334
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FIANRRC QIG+EPL+ ENPFPWM+E+IDLKKE+NFFETRV EYQ G
Sbjct: 335 NAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFFETRVIEYQTGG 394
Query: 121 ELKWD 125
L W+
Sbjct: 395 TLSWE 399
>gi|254282900|ref|ZP_04957868.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
proteobacterium NOR51-B]
gi|219679103|gb|EED35452.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
proteobacterium NOR51-B]
Length = 421
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIK+ENPHLWT EFQ++ M+ E T LEI YA +TMP+G +G+
Sbjct: 297 LRDESMHLNFGIDVINQIKLENPHLWTAEFQEEVVQMILEGTQLEIEYARDTMPRGVLGM 356
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+QFI NRR +Q+GL + +NPFPWMSE++DL+KEKNFFETRV EYQ G
Sbjct: 357 NAAMMEEYLQFICNRRLNQLGLSEQYPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 416
Query: 121 ELKWD 125
L WD
Sbjct: 417 ALTWD 421
>gi|194290770|ref|YP_002006677.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus
taiwanensis LMG 19424]
gi|193224605|emb|CAQ70616.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
[Cupriavidus taiwanensis LMG 19424]
Length = 396
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 81/125 (64%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL
Sbjct: 272 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 331
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 332 NAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 391
Query: 121 ELKWD 125
L WD
Sbjct: 392 ALSWD 396
>gi|325983070|ref|YP_004295472.1| ribonucleoside-diphosphate reductase [Nitrosomonas sp. AL212]
gi|325532589|gb|ADZ27310.1| Ribonucleoside-diphosphate reductase [Nitrosomonas sp. AL212]
Length = 381
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 100/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGIDVINQIK+ENP LWTK F+++ ++ +A LE YA +TMP+G +G+
Sbjct: 257 LRDESMHCNFGIDVINQIKMENPQLWTKAFREEIAALMQKAVALEYRYAEDTMPRGVLGM 316
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP ++Y+++IANRRC QIGL+ L+ NPFPWMSE++DLKKEKNFFETRVTEYQ G
Sbjct: 317 NAPMFKEYLRYIANRRCQQIGLDTLYPNANNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 376
Query: 121 ELKWD 125
L WD
Sbjct: 377 ALSWD 381
>gi|330815478|ref|YP_004359183.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
gladioli BSR3]
gi|327367871|gb|AEA59227.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
gladioli BSR3]
Length = 407
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL
Sbjct: 283 LRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKHAVELEYRYAEDTMPRGVLGL 342
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FIANRRC QIGL+ L+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 343 NASMFKSYLRFIANRRCQQIGLDALYPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 402
Query: 121 ELKWD 125
L W+
Sbjct: 403 ALSWE 407
>gi|82703584|ref|YP_413150.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosospira
multiformis ATCC 25196]
gi|82411649|gb|ABB75758.1| Ribonucleoside-diphosphate reductase [Nitrosospira multiformis ATCC
25196]
Length = 408
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 81/125 (64%), Positives = 101/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGIDV+NQIK+ENPHLWTKEF+ + ++ +A LE YA +TMP+G +GL
Sbjct: 284 LRDESMHCNFGIDVVNQIKMENPHLWTKEFRSEISALMQKAVELEYRYAEDTMPRGVLGL 343
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP ++Y+++IANRRC QIGL+ L+ NPFPWMSE+IDLKKEKNFFETRVTEYQ G
Sbjct: 344 NAPMFKEYLRYIANRRCQQIGLDILYPGASNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 403
Query: 121 ELKWD 125
L WD
Sbjct: 404 VLNWD 408
>gi|167825888|ref|ZP_02457359.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
pseudomallei 9]
gi|167924622|ref|ZP_02511713.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
pseudomallei BCC215]
gi|254180586|ref|ZP_04887184.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei 1655]
gi|254190977|ref|ZP_04897483.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei Pasteur 52237]
gi|157938651|gb|EDO94321.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei Pasteur 52237]
gi|184211125|gb|EDU08168.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
pseudomallei 1655]
Length = 372
Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL
Sbjct: 248 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 307
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 308 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 367
Query: 121 ELKWD 125
L W+
Sbjct: 368 ALSWE 372
>gi|292490774|ref|YP_003526213.1| ribonucleoside-diphosphate reductase [Nitrosococcus halophilus Nc4]
gi|291579369|gb|ADE13826.1| Ribonucleoside-diphosphate reductase [Nitrosococcus halophilus Nc4]
Length = 415
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 85/125 (68%), Positives = 102/125 (81%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
MRDES+H+NFGIDVINQIKIENPHLWT F+Q++ M+ EA LE YA++TMP+G +GL
Sbjct: 291 MRDESMHMNFGIDVINQIKIENPHLWTDSFKQETIQMIREAVSLETQYAYDTMPRGVLGL 350
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP ++Y++FIANRRC QIGL + NPFPWMSE++DLKKEKNFFETRVTEYQ G
Sbjct: 351 NAPMFDEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEILDLKKEKNFFETRVTEYQTGG 410
Query: 121 ELKWD 125
LKWD
Sbjct: 411 ALKWD 415
>gi|220935777|ref|YP_002514676.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp.
HL-EbGR7]
gi|219997087|gb|ACL73689.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp.
HL-EbGR7]
Length = 408
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 83/125 (66%), Positives = 101/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H+NFGIDVINQIK+ENPHLWT F+++ RTM+ +A LE YA +TMP+G +G+
Sbjct: 284 LRDESMHMNFGIDVINQIKVENPHLWTAAFKEEMRTMIRDAVELEAQYARDTMPRGVLGM 343
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+ FIANRRC QIGL ++ ENPFPWMSEV+DLKKEKNFFETRVTEYQ G
Sbjct: 344 NAAMFEEYLHFIANRRCAQIGLAEIYPGAENPFPWMSEVLDLKKEKNFFETRVTEYQTGG 403
Query: 121 ELKWD 125
L WD
Sbjct: 404 ALSWD 408
>gi|241664219|ref|YP_002982579.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
pickettii 12D]
gi|309783064|ref|ZP_07677783.1| ribonucleoside-diphosphate reductase, beta subunit [Ralstonia sp.
5_7_47FAA]
gi|240866246|gb|ACS63907.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
gi|308918172|gb|EFP63850.1| ribonucleoside-diphosphate reductase, beta subunit [Ralstonia sp.
5_7_47FAA]
Length = 402
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL
Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 338 NAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397
Query: 121 ELKWD 125
L W+
Sbjct: 398 ALSWE 402
>gi|307546480|ref|YP_003898959.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
elongata DSM 2581]
gi|307218504|emb|CBV43774.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
elongata DSM 2581]
Length = 415
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 82/125 (65%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFG+D+INQIKIENPHLWT EFQ + M+ E T LEIAYA ++MP+G +G+
Sbjct: 291 LRDESMHLNFGVDMINQIKIENPHLWTPEFQDECTQMILEGTELEIAYARDSMPRGVLGM 350
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+ FI NRR QIGL+ F +NPFPWMSE+IDL+KEKNFFETRVTEYQ G
Sbjct: 351 NAAIMEEYLHFICNRRLAQIGLKEQFPGAQNPFPWMSEIIDLRKEKNFFETRVTEYQVGG 410
Query: 121 ELKWD 125
L WD
Sbjct: 411 ALSWD 415
>gi|315122301|ref|YP_004062790.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313495703|gb|ADR52302.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 372
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 94/125 (75%), Positives = 109/125 (87%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
MRDES+HLNFGID+INQIKIENPHLWT++FQQ+ R ML EA LLE+AY +TMPK F+G+
Sbjct: 248 MRDESVHLNFGIDMINQIKIENPHLWTEDFQQEVRKMLQEAALLEVAYGKDTMPKPFLGI 307
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA CE+YM FI NRRC QIGL+P+F+ TENPFPWMSEVIDL+KEKNFFETRVTEYQ+G
Sbjct: 308 NANLCEKYMYFITNRRCTQIGLDPVFEKTENPFPWMSEVIDLQKEKNFFETRVTEYQKGT 367
Query: 121 ELKWD 125
L WD
Sbjct: 368 SLDWD 372
>gi|332039867|gb|EGI76262.1| ribonucleotide-diphosphate reductase subunit beta [Hylemonella
gracilis ATCC 19624]
Length = 399
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 96/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENP LWT EF+ + R + +A LE YA +TMP+G +G+
Sbjct: 275 LRDESMHCNFGIDLINQIKLENPQLWTPEFKAEIRGLFEKAVELEYRYAEDTMPRGVLGM 334
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 335 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 394
Query: 121 ELKWD 125
L WD
Sbjct: 395 ALSWD 399
>gi|72163401|ref|YP_291058.1| ribonucleotide-diphosphate reductase subunit beta [Thermobifida
fusca YX]
gi|71917133|gb|AAZ57035.1| ribonucleoside-diphosphate reductase [Thermobifida fusca YX]
Length = 354
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 91/125 (72%), Positives = 104/125 (83%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLWT+EFQ + RTML EA LE AY ETMP+G +GL
Sbjct: 230 LRDESIHLNFGIDVINQIKIENPHLWTEEFQDEVRTMLIEACELEAAYGRETMPRGILGL 289
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA CEQYM+FI +RR Q+GL P+F TENPFPWMSE++DLKKEKNFFETRV EYQ G+
Sbjct: 290 NAKLCEQYMRFITDRRAEQLGLAPIFGETENPFPWMSEMMDLKKEKNFFETRVIEYQTGS 349
Query: 121 ELKWD 125
L WD
Sbjct: 350 GLSWD 354
>gi|167574685|ref|ZP_02367559.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
oklahomensis C6786]
Length = 369
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL
Sbjct: 245 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 304
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 305 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 364
Query: 121 ELKWD 125
L W+
Sbjct: 365 ALSWE 369
>gi|134095932|ref|YP_001101007.1| ribonucleotide-diphosphate reductase subunit beta [Herminiimonas
arsenicoxydans]
gi|133739835|emb|CAL62886.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
reductase small subunit) [Herminiimonas arsenicoxydans]
Length = 395
Score = 157 bits (396), Expect = 6e-37, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+IN IK+ENPHLWT +F+ + + + A LE YA +TMP+G +GL
Sbjct: 271 LRDESMHCNFGIDLINTIKLENPHLWTPQFRDEIKALFLRAVELEYRYAEDTMPRGVLGL 330
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FIANRR QIGLEP+F+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 331 NAPMFKGYLRFIANRRAQQIGLEPMFEQEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 390
Query: 121 ELKWD 125
L W+
Sbjct: 391 ALNWE 395
>gi|121595925|ref|YP_987821.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax sp.
JS42]
gi|222112113|ref|YP_002554377.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax
ebreus TPSY]
gi|120608005|gb|ABM43745.1| Ribonucleoside-diphosphate reductase [Acidovorax sp. JS42]
gi|221731557|gb|ACM34377.1| Ribonucleoside-diphosphate reductase [Acidovorax ebreus TPSY]
Length = 396
Score = 157 bits (396), Expect = 6e-37, Method: Composition-based stats.
Identities = 77/125 (61%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQ+K+ENPHLWT EF+ + + + +A LE YA +TMP+G +G+
Sbjct: 272 LRDESMHCNFGIDLINQLKLENPHLWTAEFKDEIKALFIKAVELEYRYAEDTMPRGVLGM 331
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 332 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 391
Query: 121 ELKWD 125
L WD
Sbjct: 392 ALSWD 396
>gi|53804295|ref|YP_114081.1| ribonucleotide-diphosphate reductase subunit beta [Methylococcus
capsulatus str. Bath]
gi|53758056|gb|AAU92347.1| ribonucleoside-diphosphate reductase, beta subunit [Methylococcus
capsulatus str. Bath]
Length = 403
Score = 157 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 83/125 (66%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
MRDES+H+NFGIDVINQIK+ENPHLWT F+ + M+ EA +E YA++TMP+G +GL
Sbjct: 279 MRDESMHMNFGIDVINQIKVENPHLWTDGFKVEMVQMIREAVDIETQYAYDTMPRGILGL 338
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP ++Y+QFIANRRC QIGL + NPFPWMSEV+DLKKEKNFFETRVTEYQ G
Sbjct: 339 NAPMFKEYLQFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 398
Query: 121 ELKWD 125
L WD
Sbjct: 399 TLSWD 403
>gi|167564160|ref|ZP_02357076.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
oklahomensis EO147]
Length = 369
Score = 157 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL
Sbjct: 245 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 304
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 305 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 364
Query: 121 ELKWD 125
L W+
Sbjct: 365 ALSWE 369
>gi|187930114|ref|YP_001900601.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
pickettii 12J]
gi|187727004|gb|ACD28169.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12J]
Length = 402
Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL
Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 338 NAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397
Query: 121 ELKWD 125
L W+
Sbjct: 398 ALSWE 402
>gi|253997287|ref|YP_003049351.1| Ribonucleoside-diphosphate reductase [Methylotenera mobilis JLW8]
gi|253983966|gb|ACT48824.1| Ribonucleoside-diphosphate reductase [Methylotenera mobilis JLW8]
Length = 377
Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGIDVIN IK+ENPHLWT EF+ + + ++ LE YA TMP+G +GL
Sbjct: 253 LRDESMHCNFGIDVINTIKLENPHLWTAEFRDEIKGLIQHGVELEYRYAEATMPRGVLGL 312
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA ++Y++FIANRRC QIGL+ L++ NPFPWMSE+IDLKKEKNFFETRVTEYQ G
Sbjct: 313 NATMFKEYLRFIANRRCQQIGLDVLYQGATNPFPWMSEMIDLKKEKNFFETRVTEYQTGG 372
Query: 121 ELKWD 125
L WD
Sbjct: 373 ALSWD 377
>gi|300113307|ref|YP_003759882.1| ribonucleoside-diphosphate reductase [Nitrosococcus watsonii C-113]
gi|299539244|gb|ADJ27561.1| Ribonucleoside-diphosphate reductase [Nitrosococcus watsonii C-113]
Length = 412
Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats.
Identities = 85/125 (68%), Positives = 101/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
MRDES+H+NFGIDVINQIK+ENPHLW+ F+Q++ M+ EA LE YAH+TMP+G +GL
Sbjct: 288 MRDESMHMNFGIDVINQIKLENPHLWSDSFKQETLRMIQEAVSLETQYAHDTMPRGVLGL 347
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP E+Y++FIANRRC QIGL + NPFPWMSEV+DLKKEKNFFETRVTEYQ G
Sbjct: 348 NAPMFEEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 407
Query: 121 ELKWD 125
L WD
Sbjct: 408 ALSWD 412
>gi|300690381|ref|YP_003751376.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
[Ralstonia solanacearum PSI07]
gi|299077441|emb|CBJ50067.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
[Ralstonia solanacearum PSI07]
Length = 402
Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL
Sbjct: 278 LRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGL 337
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FI NRRC QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 338 NAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 397
Query: 121 ELKWD 125
L W+
Sbjct: 398 ALSWE 402
>gi|91787004|ref|YP_547956.1| ribonucleotide-diphosphate reductase subunit beta [Polaromonas sp.
JS666]
gi|91696229|gb|ABE43058.1| Ribonucleoside-diphosphate reductase [Polaromonas sp. JS666]
Length = 406
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQ+K+ENPHLWT EF+ + + + +A LE YA +TMP+G +GL
Sbjct: 282 LRDESMHCNFGIDLINQLKLENPHLWTAEFKAEIKALFLKAVELEYRYAEDTMPRGVLGL 341
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 342 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 401
Query: 121 ELKWD 125
L WD
Sbjct: 402 ALSWD 406
>gi|326315613|ref|YP_004233285.1| ribonucleoside-diphosphate reductase [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323372449|gb|ADX44718.1| Ribonucleoside-diphosphate reductase [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 387
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 77/125 (61%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQ+K+ENPHLWT EF+++ + + +A LE YA +TMP+G +G+
Sbjct: 263 LRDESMHCNFGIDLINQLKLENPHLWTAEFKEEIKGLFMKAVELEYQYAEDTMPRGVLGM 322
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 323 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 382
Query: 121 ELKWD 125
L WD
Sbjct: 383 ALSWD 387
>gi|110635036|ref|YP_675244.1| ribonucleotide-diphosphate reductase subunit beta [Mesorhizobium
sp. BNC1]
gi|110286020|gb|ABG64079.1| ribonucleotide reductase [Chelativorans sp. BNC1]
Length = 369
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 91/125 (72%), Positives = 102/125 (81%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIK ENPHLWT EFQ++ R ML +A LE AY +TMP+GF+GL
Sbjct: 245 LRDESIHLNFGIDVINQIKHENPHLWTPEFQEELRRMLKDAAELEAAYGRDTMPRGFLGL 304
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA CEQYM FIANRRC Q+GL P+F TENPFPWMSE +DLKKEKNFFETRV EYQ G
Sbjct: 305 NAGQCEQYMHFIANRRCAQLGLPPVFPETENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 364
Query: 121 ELKWD 125
L WD
Sbjct: 365 ALSWD 369
>gi|53720599|ref|YP_109585.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
pseudomallei K96243]
gi|53726102|ref|YP_104055.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
mallei ATCC 23344]
gi|52211013|emb|CAH37001.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
pseudomallei K96243]
gi|52429525|gb|AAU50118.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
mallei ATCC 23344]
Length = 350
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL
Sbjct: 226 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 285
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 286 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 345
Query: 121 ELKWD 125
L W+
Sbjct: 346 ALSWE 350
>gi|167580513|ref|ZP_02373387.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
thailandensis TXDOH]
gi|167618621|ref|ZP_02387252.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
thailandensis Bt4]
gi|257137870|ref|ZP_05586132.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
thailandensis E264]
Length = 350
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL
Sbjct: 226 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 285
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 286 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 345
Query: 121 ELKWD 125
L W+
Sbjct: 346 ALSWE 350
>gi|332110818|gb|EGJ10995.1| ribonucleotide-diphosphate reductase subunit beta [Rubrivivax
benzoatilyticus JA2]
Length = 385
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 76/125 (60%), Positives = 94/125 (75%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENP LWT F+ + R + A LE YA +TMP+G +G+
Sbjct: 261 LRDESMHCNFGIDLINQIKLENPQLWTPAFKAEIRALFERAVELEYRYAEDTMPRGVLGM 320
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV +YQ G
Sbjct: 321 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIDYQSGG 380
Query: 121 ELKWD 125
L WD
Sbjct: 381 ALSWD 385
>gi|158341282|ref|YP_001522354.1| ribonucleotide-diphosphate reductase subunit beta [Acaryochloris
marina MBIC11017]
gi|158311523|gb|ABW33134.1| ribonucleoside-diphosphate reductase, beta subunit [Acaryochloris
marina MBIC11017]
Length = 384
Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats.
Identities = 76/125 (60%), Positives = 95/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID++N IK ENPHLWT EF ++ R + A LE YA +TMP+G +GL
Sbjct: 260 LRDESMHCNFGIDLVNAIKQENPHLWTPEFCEEIRDLFKRAVELEYRYAEDTMPRGVLGL 319
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGL+P+F ENPFPWMSE++DLKKE+NFFETRV EYQ G
Sbjct: 320 NASMFKSYLRYIANRRSQQIGLDPIFASEENPFPWMSEMVDLKKERNFFETRVLEYQTGG 379
Query: 121 ELKWD 125
L WD
Sbjct: 380 ALSWD 384
>gi|255019430|ref|ZP_05291537.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Acidithiobacillus caldus ATCC 51756]
gi|254971128|gb|EET28583.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Acidithiobacillus caldus ATCC 51756]
Length = 345
Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats.
Identities = 75/125 (60%), Positives = 100/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENP LWT+ FQQ+ ++ + LE AYA +TMP+G +GL
Sbjct: 220 LRDESMHCNFGIDLINQIKLENPQLWTEGFQQEIVGLIRQGVELECAYADDTMPRGILGL 279
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP ++Y+++I NRR QIGL+P ++ +NPFPWMSE++DLKKEKNFFE+RVT+YQ G
Sbjct: 280 NAPMFKEYVRYIGNRRLSQIGLKPQWENVQNPFPWMSEMMDLKKEKNFFESRVTDYQTGG 339
Query: 121 ELKWD 125
L WD
Sbjct: 340 ALSWD 344
>gi|209885874|ref|YP_002289731.1| ribonucleoside-diphosphate reductase, beta subunit [Oligotropha
carboxidovorans OM5]
gi|209874070|gb|ACI93866.1| ribonucleoside-diphosphate reductase, beta subunit [Oligotropha
carboxidovorans OM5]
Length = 377
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 92/125 (73%), Positives = 102/125 (81%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIK+ENPHLWTK FQ + R M+ EA LE AY +TMP+GF+GL
Sbjct: 253 LRDESIHLNFGIDVINQIKLENPHLWTKAFQDEVRGMISEAAGLEAAYGRDTMPRGFLGL 312
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA CEQYM FIANRRC QIGL P+F TENPFPWMSE +DLKKEKNFFETRV EYQ G
Sbjct: 313 NAALCEQYMHFIANRRCAQIGLAPVFAETENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 372
Query: 121 ELKWD 125
L WD
Sbjct: 373 ALSWD 377
>gi|77165986|ref|YP_344511.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosococcus
oceani ATCC 19707]
gi|254436303|ref|ZP_05049809.1| ribonucleoside-diphosphate reductase, beta subunit [Nitrosococcus
oceani AFC27]
gi|76884300|gb|ABA58981.1| Ribonucleoside-diphosphate reductase [Nitrosococcus oceani ATCC
19707]
gi|207087993|gb|EDZ65266.1| ribonucleoside-diphosphate reductase, beta subunit [Nitrosococcus
oceani AFC27]
Length = 412
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 85/125 (68%), Positives = 101/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
MRDES+H+NFGIDVINQIK+ENPHLW+ F+Q++ M+ EA LE YAH+TMP+G +GL
Sbjct: 288 MRDESMHMNFGIDVINQIKLENPHLWSDSFKQETLRMIQEAVSLETQYAHDTMPRGVLGL 347
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP E+Y++FIANRRC QIGL + NPFPWMSEV+DLKKEKNFFETRVTEYQ G
Sbjct: 348 NAPMFEEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 407
Query: 121 ELKWD 125
L WD
Sbjct: 408 ALSWD 412
>gi|299533977|ref|ZP_07047329.1| ribonucleotide-diphosphate reductase subunit beta [Comamonas
testosteroni S44]
gi|298717886|gb|EFI58891.1| ribonucleotide-diphosphate reductase subunit beta [Comamonas
testosteroni S44]
Length = 363
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQ+K+ENPHLWT EF+Q+ + +A LE YA +TMP+G +G+
Sbjct: 239 LRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQKAVELEYRYAEDTMPRGVLGM 298
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 299 NASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 358
Query: 121 ELKWD 125
L WD
Sbjct: 359 ALSWD 363
>gi|74317993|ref|YP_315733.1| ribonucleotide-diphosphate reductase subunit beta [Thiobacillus
denitrificans ATCC 25259]
gi|74057488|gb|AAZ97928.1| ribonucleoside-diphosphate reductase beta chain [Thiobacillus
denitrificans ATCC 25259]
Length = 376
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 77/125 (61%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+IN IK ENPHLWT EF+ + RT++ + LE YA +TMP+G +GL
Sbjct: 252 LRDESMHCNFGIDLINTIKQENPHLWTSEFKAEIRTLIQKGVELEFRYAEDTMPRGVLGL 311
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
N+ ++Y++FI+NRRC QIGL+ +F NPFPWM+E+IDLKKEKNFFETRVTEYQ G
Sbjct: 312 NSAQFKEYLRFISNRRCQQIGLDEMFPGVSNPFPWMAEMIDLKKEKNFFETRVTEYQTGG 371
Query: 121 ELKWD 125
L WD
Sbjct: 372 ALSWD 376
>gi|152980709|ref|YP_001354668.1| ribonucleotide-diphosphate reductase subunit beta
[Janthinobacterium sp. Marseille]
gi|151280786|gb|ABR89196.1| ribonucleoside-diphosphate reductase beta chain [Janthinobacterium
sp. Marseille]
Length = 392
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 100/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+IN IK+ENPHLWT +F+++ +T+ A LE YA +TMP+G +GL
Sbjct: 268 LRDESMHCNFGIDLINTIKLENPHLWTPQFREEIKTLFLRAVELEYRYAEDTMPRGVLGL 327
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FIANRR QIGLEP+F+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 328 NAPMFKGYLRFIANRRAQQIGLEPMFEQEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 387
Query: 121 ELKWD 125
L W+
Sbjct: 388 ALNWE 392
>gi|115525181|ref|YP_782092.1| ribonucleotide reductase [Rhodopseudomonas palustris BisA53]
gi|115519128|gb|ABJ07112.1| ribonucleotide reductase [Rhodopseudomonas palustris BisA53]
Length = 223
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 88/125 (70%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENP LWT FQ++ R ML EA LE AY +TMP+GF GL
Sbjct: 99 LRDESIHLNFGIDIINQIKIENPELWTAGFQEELRGMLREAAELEAAYCRDTMPRGFFGL 158
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA CEQYM FI NRRC Q+GL P+F ENPFPWMSE +DLKKEKNFFETRV EYQ G
Sbjct: 159 NAALCEQYMHFITNRRCAQLGLAPIFAEVENPFPWMSETMDLKKEKNFFETRVIEYQNGG 218
Query: 121 ELKWD 125
L WD
Sbjct: 219 ALTWD 223
>gi|30250346|ref|NP_842416.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosomonas
europaea ATCC 19718]
gi|30181141|emb|CAD86334.1| Ribonucleotide reductase [Nitrosomonas europaea ATCC 19718]
Length = 382
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 82/125 (65%), Positives = 101/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGIDVINQIK+ENPHLWT+EF+++ ++ +A LE YA +TMP+G +GL
Sbjct: 258 LRDESMHCNFGIDVINQIKLENPHLWTREFREEISALMRKAVELEYRYAEDTMPRGVLGL 317
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP ++Y++FI NRR HQIGL+PLF NPFPWMSE+IDLKKEKNFFETRV EYQ G
Sbjct: 318 NAPMFKEYLRFIINRRSHQIGLDPLFPEAGNPFPWMSEMIDLKKEKNFFETRVIEYQTGG 377
Query: 121 ELKWD 125
L WD
Sbjct: 378 VLSWD 382
>gi|329893650|ref|ZP_08269784.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
proteobacterium IMCC3088]
gi|328923577|gb|EGG30889.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
proteobacterium IMCC3088]
Length = 432
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIK+ENPHLWT++FQ++ ML E T +EI YA +TMP+G +G+
Sbjct: 308 LRDESMHLNFGIDVINQIKLENPHLWTEDFQKEVIQMLLEGTQIEIEYARDTMPRGVLGM 367
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+QFI NRR Q+GL F +NPFPWMSE++DL+KEKNFFETRV EYQ G
Sbjct: 368 NAAMMEEYLQFICNRRLAQLGLPEQFPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 427
Query: 121 ELKWD 125
L WD
Sbjct: 428 ALSWD 432
>gi|221065168|ref|ZP_03541273.1| Ribonucleoside-diphosphate reductase [Comamonas testosteroni KF-1]
gi|220710191|gb|EED65559.1| Ribonucleoside-diphosphate reductase [Comamonas testosteroni KF-1]
Length = 363
Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 96/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQ+K+ENPHLWT EF+Q+ + A LE YA +TMP+G +G+
Sbjct: 239 LRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQRAVELEYRYAEDTMPRGVLGM 298
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 299 NASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 358
Query: 121 ELKWD 125
L WD
Sbjct: 359 ALSWD 363
>gi|145588393|ref|YP_001154990.1| ribonucleotide-diphosphate reductase subunit beta [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|145046799|gb|ABP33426.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 394
Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats.
Identities = 75/125 (60%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENP LWT F+ + +++ +A LE YA +TMP+G +GL
Sbjct: 270 LRDESMHCNFGIDLINQIKLENPQLWTSAFKDEIKSIFEKAVELEYRYAEDTMPRGVLGL 329
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y+++I NRRC QIGL+ +F ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 330 NAPMFKGYLRYICNRRCLQIGLDAMFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 389
Query: 121 ELKWD 125
L W+
Sbjct: 390 ALSWE 394
>gi|255019898|ref|ZP_05291973.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Acidithiobacillus caldus ATCC 51756]
gi|254970678|gb|EET28165.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Acidithiobacillus caldus ATCC 51756]
Length = 374
Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats.
Identities = 74/125 (59%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENP LWT+ FQ++ +++ + LE AYA +TMP+G +GL
Sbjct: 250 LRDESMHCNFGIDLINQIKVENPDLWTEPFQEEIVSLIRKGVELECAYADDTMPRGVLGL 309
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y+++I NRR Q+GL + +NPFPWMSE++DLKKEKNFFETRVTEYQ G
Sbjct: 310 NAPIFKDYVKYIGNRRLQQLGLPVQWAGIQNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 369
Query: 121 ELKWD 125
L WD
Sbjct: 370 ALSWD 374
>gi|319764328|ref|YP_004128265.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
BC]
gi|330826374|ref|YP_004389677.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
K601]
gi|317118889|gb|ADV01378.1| Ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
BC]
gi|329311746|gb|AEB86161.1| Ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
K601]
Length = 396
Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats.
Identities = 74/125 (59%), Positives = 95/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQ+K+ENP LWT F+ + + + +A LE YA +TMP+G +G+
Sbjct: 272 LRDESMHCNFGIDLINQLKLENPQLWTPAFKDEIKGLFLKAVDLEYRYAEDTMPRGVLGM 331
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGL+ LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 332 NASMFKGYLRYIANRRATQIGLDALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 391
Query: 121 ELKWD 125
L WD
Sbjct: 392 ALSWD 396
>gi|324998522|ref|ZP_08119634.1| ribonucleoside-diphosphate reductase beta chain [Pseudonocardia sp.
P1]
Length = 358
Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 87/125 (69%), Positives = 103/125 (82%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID INQIKIENPHLWT+EF + R MLHEA LE+AYA +TMP+G +GL
Sbjct: 234 LRDESIHLNFGIDCINQIKIENPHLWTEEFAAEIRAMLHEACELEVAYARDTMPRGMLGL 293
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
A SCEQY++FI +RR QIGL PLF +NPFPWMSE +DL+KEKNFFETRVTEY+ G
Sbjct: 294 TAESCEQYLRFITDRRAEQIGLAPLFGQADNPFPWMSEAMDLRKEKNFFETRVTEYRTGG 353
Query: 121 ELKWD 125
L+WD
Sbjct: 354 SLEWD 358
>gi|192360823|ref|YP_001982048.1| ribonucleotide-diphosphate reductase subunit beta [Cellvibrio
japonicus Ueda107]
gi|190686988|gb|ACE84666.1| ribonucleoside reductase, beta subunit [Cellvibrio japonicus
Ueda107]
Length = 429
Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 82/125 (65%), Positives = 100/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIK+ENPHLWT EFQQ+ M+ E T LEI YA ++MP+G +G+
Sbjct: 305 LRDESMHLNFGIDVINQIKLENPHLWTAEFQQEVLQMILEGTELEIQYARDSMPRGVLGM 364
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+ FIANRRC Q+GL+ F +NPFPWMSE++DL+KEKNFFETRV EYQ G
Sbjct: 365 NAAMMEEYLHFIANRRCAQLGLKEQFPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 424
Query: 121 ELKWD 125
L WD
Sbjct: 425 ALSWD 429
>gi|134097869|ref|YP_001103530.1| ribonucleotide-diphosphate reductase subunit beta
[Saccharopolyspora erythraea NRRL 2338]
gi|291007412|ref|ZP_06565385.1| ribonucleotide-diphosphate reductase subunit beta
[Saccharopolyspora erythraea NRRL 2338]
gi|133910492|emb|CAM00605.1| ribonucleoside-diphosphate reductase, beta subunit
[Saccharopolyspora erythraea NRRL 2338]
Length = 360
Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 90/125 (72%), Positives = 103/125 (82%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID INQIKIENPHLWT EFQ++ RTML EA LE+AY +TMP+G +GL
Sbjct: 236 LRDESIHLNFGIDCINQIKIENPHLWTPEFQEEVRTMLTEACELEVAYGRDTMPRGILGL 295
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA CE+YM+FI NRRC Q+GLEP+F T NPFPWMSE +DLKKEKNFFETRV EYQ G
Sbjct: 296 NAGLCEEYMRFITNRRCAQLGLEPVFPETANPFPWMSEAMDLKKEKNFFETRVIEYQSGG 355
Query: 121 ELKWD 125
L WD
Sbjct: 356 ALDWD 360
>gi|226227154|ref|YP_002761260.1| ribonucleoside-diphosphate reductase beta subunit [Gemmatimonas
aurantiaca T-27]
gi|226090345|dbj|BAH38790.1| ribonucleoside-diphosphate reductase beta subunit [Gemmatimonas
aurantiaca T-27]
Length = 371
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 89/125 (71%), Positives = 102/125 (81%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIK+ENPHLW+ FQ++ R ML EA LE+AY +TMP+GF+GL
Sbjct: 247 LRDESIHLNFGIDVINQIKVENPHLWSAAFQEEVRQMLAEACELEVAYGRDTMPRGFLGL 306
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA CE YM FI NRRC Q+GL P+F T+NPFPWMSE IDLKKEKNFFETRV EYQ G
Sbjct: 307 NAALCETYMHFITNRRCAQLGLAPVFPETDNPFPWMSEAIDLKKEKNFFETRVIEYQNGG 366
Query: 121 ELKWD 125
LKWD
Sbjct: 367 ALKWD 371
>gi|89902117|ref|YP_524588.1| ribonucleotide-diphosphate reductase subunit beta [Rhodoferax
ferrireducens T118]
gi|89346854|gb|ABD71057.1| Ribonucleoside-diphosphate reductase [Rhodoferax ferrireducens
T118]
Length = 400
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 76/125 (60%), Positives = 96/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQ+K+ENP LWT EF+ + + + +A LE YA +TMP+G +G+
Sbjct: 276 LRDESMHCNFGIDLINQLKLENPQLWTSEFKAEIKALFEQAVELEYRYAEDTMPRGVLGM 335
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 336 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 395
Query: 121 ELKWD 125
L WD
Sbjct: 396 ALSWD 400
>gi|50083944|ref|YP_045454.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
sp. ADP1]
gi|49529920|emb|CAG67632.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
sp. ADP1]
Length = 427
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 78/124 (62%), Positives = 98/124 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H+NFGID+INQIKIENPHLWT EFQQ+ M+ E TLLEI YA +TMP+G +G+
Sbjct: 304 LRDESMHVNFGIDMINQIKIENPHLWTAEFQQEVIQMIVEGTLLEIEYARDTMPRGVLGM 363
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y++FI NRR Q+GL ++ NPF WMSE++DL+KEKNFFETRVT+YQ G
Sbjct: 364 NAAMMEEYLKFICNRRLAQLGLPEQYRGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423
Query: 121 ELKW 124
L W
Sbjct: 424 ALSW 427
>gi|319791701|ref|YP_004153341.1| ribonucleoside-diphosphate reductase [Variovorax paradoxus EPS]
gi|315594164|gb|ADU35230.1| Ribonucleoside-diphosphate reductase [Variovorax paradoxus EPS]
Length = 411
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 76/125 (60%), Positives = 95/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQ+K+ENP LWT EF+ + + + A LE YA +TMP+G +G+
Sbjct: 287 LRDESMHCNFGIDLINQLKLENPGLWTPEFKAEIKDLFMRAVELEYKYAEDTMPRGVLGM 346
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 347 NASMFKGYLRYIANRRAQQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 406
Query: 121 ELKWD 125
L WD
Sbjct: 407 ALSWD 411
>gi|302525965|ref|ZP_07278307.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. AA4]
gi|302434860|gb|EFL06676.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. AA4]
Length = 357
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 86/125 (68%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID INQIKIENPHLWT+EFQ + R ML EA LE+ YA +TMP+G +GL
Sbjct: 233 LRDESIHLNFGIDCINQIKIENPHLWTEEFQAEVRGMLQEACELEVKYARDTMPRGMLGL 292
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A CEQYM FI +RR QIGL P++ ENPFPWMSE +DLKKEKNFFETRV EYQ G
Sbjct: 293 SADLCEQYMHFITDRRAQQIGLPPIYGENENPFPWMSEAMDLKKEKNFFETRVIEYQSGG 352
Query: 121 ELKWD 125
L WD
Sbjct: 353 ALDWD 357
>gi|241764092|ref|ZP_04762129.1| Ribonucleoside-diphosphate reductase [Acidovorax delafieldii 2AN]
gi|241366556|gb|EER61044.1| Ribonucleoside-diphosphate reductase [Acidovorax delafieldii 2AN]
Length = 398
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 77/125 (61%), Positives = 96/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQ+K+ENPHLWT EF+ + + + A LE YA +TMP+G +G+
Sbjct: 274 LRDESMHCNFGIDLINQLKLENPHLWTAEFKAEIKALFMRAVELEYRYAEDTMPRGVLGM 333
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 334 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 393
Query: 121 ELKWD 125
L WD
Sbjct: 394 ALSWD 398
>gi|297563527|ref|YP_003682501.1| ribonucleoside-diphosphate reductase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296847975|gb|ADH69995.1| Ribonucleoside-diphosphate reductase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 360
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 88/125 (70%), Positives = 102/125 (81%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW++EFQ + R ML EA LE+AY ETMP+G +GL
Sbjct: 236 LRDESIHLNFGIDVINQIKIENPHLWSEEFQAEVRQMLTEACELEVAYGRETMPRGVLGL 295
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA CE+YM FI +RR QIGL P+F TENPFPWMSE++DL+KEKNFFETRV EYQ G
Sbjct: 296 NAELCEKYMHFITDRRAEQIGLAPIFGETENPFPWMSEMMDLQKEKNFFETRVIEYQTGG 355
Query: 121 ELKWD 125
L WD
Sbjct: 356 GLDWD 360
>gi|124268397|ref|YP_001022401.1| ribonucleotide-diphosphate reductase subunit beta [Methylibium
petroleiphilum PM1]
gi|124261172|gb|ABM96166.1| Ribonucleoside-diphosphate reductase [Methylibium petroleiphilum
PM1]
Length = 403
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 96/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENP LWT EF+ + + + +A LE YA +TMP+G +GL
Sbjct: 279 LRDESMHCNFGIDLINQIKLENPQLWTAEFKAEIKALFMKAVELEYRYAEDTMPRGVLGL 338
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 339 NASMFKGYLRYIANRRATQIGLEELFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 398
Query: 121 ELKWD 125
L WD
Sbjct: 399 ALSWD 403
>gi|148546452|ref|YP_001266554.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
putida F1]
gi|148510510|gb|ABQ77370.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida F1]
Length = 415
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW ++++ M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410
Query: 121 ELKWD 125
L WD
Sbjct: 411 ALSWD 415
>gi|167837963|ref|ZP_02464822.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
thailandensis MSMB43]
Length = 303
Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENPHLWT EF+ + R + A LE YA +TMP+G +GL
Sbjct: 179 LRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYAEDTMPRGVLGL 238
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FI+NRRC QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 239 NASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 298
Query: 121 ELKWD 125
L W+
Sbjct: 299 ALSWE 303
>gi|329902475|ref|ZP_08273120.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Oxalobacteraceae bacterium IMCC9480]
gi|327548767|gb|EGF33404.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Oxalobacteraceae bacterium IMCC9480]
Length = 416
Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID++N IK+ENPHLWT EF+ + + + A LE YA +TMP+G +GL
Sbjct: 292 LRDESMHCNFGIDLVNTIKMENPHLWTPEFRDEIKALFLTAVELEYRYAEDTMPRGVLGL 351
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FIANRR QIGLEP+F+ ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 352 NAPMFKGYLRFIANRRAQQIGLEPMFENEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 411
Query: 121 ELKWD 125
L W+
Sbjct: 412 ALSWE 416
>gi|171057074|ref|YP_001789423.1| ribonucleotide-diphosphate reductase subunit beta [Leptothrix
cholodnii SP-6]
gi|170774519|gb|ACB32658.1| Ribonucleoside-diphosphate reductase [Leptothrix cholodnii SP-6]
Length = 402
Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats.
Identities = 77/125 (61%), Positives = 95/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+IN IK+ENPHLWT F+ + + + +A LE YA +TMP+G +GL
Sbjct: 278 LRDESMHCNFGIDLINAIKLENPHLWTPAFKAEIKALFLKAVELEYRYAEDTMPRGVLGL 337
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 338 NASMFKGYLRYIANRRATQIGLEELFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 397
Query: 121 ELKWD 125
L WD
Sbjct: 398 ALSWD 402
>gi|264680215|ref|YP_003280125.1| ribonucleotide reductase [Comamonas testosteroni CNB-2]
gi|262210731|gb|ACY34829.1| ribonucleotide reductase [Comamonas testosteroni CNB-2]
Length = 336
Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQ+K+ENPHLWT EF+Q+ + +A LE YA +TMP+G +G+
Sbjct: 212 LRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQKAVELEYRYAEDTMPRGVLGM 271
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 272 NASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 331
Query: 121 ELKWD 125
L WD
Sbjct: 332 ALSWD 336
>gi|330983931|gb|EGH82034.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. lachrymans str. M301315]
Length = 388
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 81/125 (64%), Positives = 101/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENPHLWT E ++++ M+ + T LEIAYA +TMP+G +G+
Sbjct: 264 LRDESMHLNFGIDMINQIKIENPHLWTDELKREATVMIIQGTQLEIAYARDTMPRGVLGM 323
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+QFIANRR QIGL ++ +NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 324 NAAMMEEYLQFIANRRLTQIGLPEVYAGAKNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 383
Query: 121 ELKWD 125
L WD
Sbjct: 384 ALSWD 388
>gi|88705571|ref|ZP_01103281.1| ribonucleoside-diphosphate reductase, beta subunit [Congregibacter
litoralis KT71]
gi|88700084|gb|EAQ97193.1| ribonucleoside-diphosphate reductase, beta subunit [Congregibacter
litoralis KT71]
Length = 469
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 82/125 (65%), Positives = 100/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIK+ENP LWT+EF+Q++ M+ E T LEI YA +TMP+G +G+
Sbjct: 345 LRDESMHLNFGIDVINQIKLENPQLWTEEFKQEAIQMILEGTQLEIEYARDTMPRGVLGM 404
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+QFIANRR QIGL F +NPFPWMSE++DL+KEKNFFETRV EYQ G
Sbjct: 405 NAAMMEEYLQFIANRRLSQIGLPEQFPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 464
Query: 121 ELKWD 125
L WD
Sbjct: 465 ALSWD 469
>gi|239813962|ref|YP_002942872.1| ribonucleotide-diphosphate reductase subunit beta [Variovorax
paradoxus S110]
gi|239800539|gb|ACS17606.1| Ribonucleoside-diphosphate reductase [Variovorax paradoxus S110]
Length = 391
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 76/125 (60%), Positives = 96/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQ+K+ENP LWT EF+ + + + +A LE YA +TMP+G +G+
Sbjct: 267 LRDESMHCNFGIDLINQLKLENPGLWTPEFKAEIKALFLKAVELEYKYAEDTMPRGVLGM 326
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 327 NASMFKGYLRYIANRRAQQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 386
Query: 121 ELKWD 125
L WD
Sbjct: 387 ALSWD 391
>gi|226945386|ref|YP_002800459.1| ribonucleotide-diphosphate reductase subunit beta [Azotobacter
vinelandii DJ]
gi|226720313|gb|ACO79484.1| Ribonucleoside-diphosphate reductase beta subunit [Azotobacter
vinelandii DJ]
Length = 416
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 96/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENPHLW E + ++ M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDMINQIKIENPHLWDAEMKDEATQMILQGTQLEIEYARDTMPRGVLGM 351
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR Q+GL + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 352 NATMMEDYLKFIANRRLSQLGLPEQYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411
Query: 121 ELKWD 125
L WD
Sbjct: 412 ALSWD 416
>gi|171463021|ref|YP_001797134.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171192559|gb|ACB43520.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 394
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 73/125 (58%), Positives = 95/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENP LW F+ + +++ +A LE YA +TMP+G +GL
Sbjct: 270 LRDESMHCNFGIDLINQIKLENPQLWISAFKDEIKSIFEKAVELEYRYAEDTMPRGVLGL 329
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + +++I NRRC QIGL+ +F ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 330 NAPMFKGCLRYICNRRCLQIGLDAMFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 389
Query: 121 ELKWD 125
L W+
Sbjct: 390 ALSWE 394
>gi|226953559|ref|ZP_03824023.1| ribonucleotide reductase, beta subunit [Acinetobacter sp. ATCC
27244]
gi|294649451|ref|ZP_06726876.1| ribonucleotide-diphosphate reductase beta subunit [Acinetobacter
haemolyticus ATCC 19194]
gi|226835696|gb|EEH68079.1| ribonucleotide reductase, beta subunit [Acinetobacter sp. ATCC
27244]
gi|292824656|gb|EFF83434.1| ribonucleotide-diphosphate reductase beta subunit [Acinetobacter
haemolyticus ATCC 19194]
Length = 427
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 78/124 (62%), Positives = 96/124 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENPHLWT FQQ+ M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTATFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G
Sbjct: 364 NASMMEEYLKFICNRRLAQLGLPEQFAGVTNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423
Query: 121 ELKW 124
L W
Sbjct: 424 ALSW 427
>gi|293609145|ref|ZP_06691448.1| ribonucleoside-diphosphate reductase [Acinetobacter sp. SH024]
gi|292829718|gb|EFF88080.1| ribonucleoside-diphosphate reductase [Acinetobacter sp. SH024]
Length = 427
Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats.
Identities = 79/124 (63%), Positives = 97/124 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 363
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423
Query: 121 ELKW 124
L W
Sbjct: 424 ALSW 427
>gi|120609557|ref|YP_969235.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax
citrulli AAC00-1]
gi|120588021|gb|ABM31461.1| Ribonucleoside-diphosphate reductase [Acidovorax citrulli AAC00-1]
Length = 387
Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats.
Identities = 77/125 (61%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQ+K+ENPHLWT EF+++ + + +A LE YA +TMP+G +G+
Sbjct: 263 LRDESMHCNFGIDLINQLKLENPHLWTAEFKEEIKGLFMKAVELEYQYAEDTMPRGVLGM 322
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 323 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 382
Query: 121 ELKWD 125
L WD
Sbjct: 383 ALSWD 387
>gi|254516739|ref|ZP_05128798.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
proteobacterium NOR5-3]
gi|219675162|gb|EED31529.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
proteobacterium NOR5-3]
Length = 441
Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats.
Identities = 83/125 (66%), Positives = 101/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIK+ENPHLWT+EF+Q++ M+ E T LEI YA +TMP+G +G+
Sbjct: 317 LRDESMHLNFGIDVINQIKLENPHLWTEEFKQEAIQMILEGTQLEIEYARDTMPRGVLGM 376
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+QFIANRR QIGL F +NPFPWMSE++DL+KEKNFFETRV EYQ G
Sbjct: 377 NAAMMEEYLQFIANRRLSQIGLPEQFPGVQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 436
Query: 121 ELKWD 125
L WD
Sbjct: 437 ALSWD 441
>gi|256377255|ref|YP_003100915.1| ribonucleoside-diphosphate reductase [Actinosynnema mirum DSM
43827]
gi|255921558|gb|ACU37069.1| Ribonucleoside-diphosphate reductase [Actinosynnema mirum DSM
43827]
Length = 358
Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats.
Identities = 91/125 (72%), Positives = 101/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID INQIKIENPHLW + FQ + RTML EA LEIAY +TMP G +GL
Sbjct: 234 LRDESIHLNFGIDAINQIKIENPHLWGEAFQAEVRTMLAEACELEIAYGRDTMPNGLLGL 293
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA CEQYM+FI NRRC Q+GLEP+F TENPFPWMSE +DLKKEKNFFETRVTEY G
Sbjct: 294 NAELCEQYMRFITNRRCAQLGLEPVFAATENPFPWMSEAVDLKKEKNFFETRVTEYASGG 353
Query: 121 ELKWD 125
L WD
Sbjct: 354 TLDWD 358
>gi|121606275|ref|YP_983604.1| ribonucleotide-diphosphate reductase subunit beta [Polaromonas
naphthalenivorans CJ2]
gi|120595244|gb|ABM38683.1| Ribonucleoside-diphosphate reductase [Polaromonas naphthalenivorans
CJ2]
Length = 387
Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats.
Identities = 77/125 (61%), Positives = 95/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQ+K+ENP LWT EF+ + + +A LE YA +TMP+G +GL
Sbjct: 263 LRDESMHCNFGIDLINQLKLENPQLWTAEFKAEINALFMKAVELEYRYAEDTMPRGVLGL 322
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 323 NASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 382
Query: 121 ELKWD 125
L WD
Sbjct: 383 ALSWD 387
>gi|255318309|ref|ZP_05359544.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
radioresistens SK82]
gi|262379054|ref|ZP_06072210.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
radioresistens SH164]
gi|255304621|gb|EET83803.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
radioresistens SK82]
gi|262298511|gb|EEY86424.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
radioresistens SH164]
Length = 427
Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats.
Identities = 79/124 (63%), Positives = 98/124 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEIIQMILEGTMLEIEYARDTMPRGVLGM 363
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y++FI NRR +Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G
Sbjct: 364 NAAMMEEYLKFICNRRLNQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423
Query: 121 ELKW 124
L W
Sbjct: 424 ALSW 427
>gi|160896947|ref|YP_001562529.1| ribonucleotide-diphosphate reductase subunit beta [Delftia
acidovorans SPH-1]
gi|160362531|gb|ABX34144.1| Ribonucleoside-diphosphate reductase [Delftia acidovorans SPH-1]
Length = 363
Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats.
Identities = 76/125 (60%), Positives = 96/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQ+K+ENP LWT EF+++ + +A LE YA +TMP+G +G+
Sbjct: 239 LRDESMHCNFGIDLINQLKLENPQLWTPEFKEEITALFVKAVELEYRYAEDTMPRGVLGM 298
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGLE LF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 299 NASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 358
Query: 121 ELKWD 125
L WD
Sbjct: 359 ALSWD 363
>gi|169797064|ref|YP_001714857.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
baumannii AYE]
gi|213156529|ref|YP_002318190.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
baumannii AB0057]
gi|215484526|ref|YP_002326761.1| ribonucleotide-diphosphate reductase small chain [Acinetobacter
baumannii AB307-0294]
gi|239501302|ref|ZP_04660612.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
baumannii AB900]
gi|260555643|ref|ZP_05827863.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
baumannii ATCC 19606]
gi|294839369|ref|ZP_06784052.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
sp. 6013113]
gi|294859388|ref|ZP_06797157.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
sp. 6013150]
gi|301345633|ref|ZP_07226374.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
baumannii AB056]
gi|301512780|ref|ZP_07238017.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
baumannii AB058]
gi|301596291|ref|ZP_07241299.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
baumannii AB059]
gi|169149991|emb|CAM87885.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
baumannii AYE]
gi|193076530|gb|ABO11186.2| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
baumannii ATCC 17978]
gi|213055689|gb|ACJ40591.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
baumannii AB0057]
gi|213987168|gb|ACJ57467.1| ribonucleotide-diphosphate reductase small chain [Acinetobacter
baumannii AB307-0294]
gi|260410554|gb|EEX03852.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
baumannii ATCC 19606]
Length = 427
Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats.
Identities = 79/124 (63%), Positives = 97/124 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423
Query: 121 ELKW 124
L W
Sbjct: 424 ALSW 427
>gi|160871658|ref|ZP_02061790.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsiella
grylli]
gi|159120457|gb|EDP45795.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsiella
grylli]
Length = 362
Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats.
Identities = 77/125 (61%), Positives = 92/125 (73%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIK+ENPHLWT EF++ ++ E LE YA +T+P+G +GL
Sbjct: 237 LRDESMHLNFGIDVINQIKLENPHLWTPEFKRYVINLIKEGVDLEYQYALDTLPRGILGL 296
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA Y++FI NRR QIGL + NP PWMSE+IDLKKEKNFFETRVTEYQ G
Sbjct: 297 NANLMWDYLRFIGNRRFTQIGLAEQYPGVSNPLPWMSEIIDLKKEKNFFETRVTEYQTGG 356
Query: 121 ELKWD 125
L WD
Sbjct: 357 SLNWD 361
>gi|256822964|ref|YP_003146927.1| Ribonucleoside-diphosphate reductase [Kangiella koreensis DSM
16069]
gi|256796503|gb|ACV27159.1| Ribonucleoside-diphosphate reductase [Kangiella koreensis DSM
16069]
Length = 421
Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats.
Identities = 81/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFG+D+INQIK+ENPHLWT EF+Q+ M+ E T LEI YA +TMP+G +G+
Sbjct: 297 LRDESMHLNFGVDIINQIKLENPHLWTAEFKQEVLQMILEGTQLEIEYARDTMPRGVLGM 356
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+QFI NRR Q+GL FK NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 357 NAGMMEEYLQFICNRRLAQLGLPEQFKNVSNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 416
Query: 121 ELKWD 125
L WD
Sbjct: 417 ALSWD 421
>gi|330811278|ref|YP_004355740.1| Ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327379386|gb|AEA70736.1| Ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 415
Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410
Query: 121 ELKWD 125
L WD
Sbjct: 411 ALSWD 415
>gi|260551040|ref|ZP_05825245.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
sp. RUH2624]
gi|260405988|gb|EEW99475.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
sp. RUH2624]
Length = 427
Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats.
Identities = 79/124 (63%), Positives = 97/124 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423
Query: 121 ELKW 124
L W
Sbjct: 424 ALSW 427
>gi|184157022|ref|YP_001845361.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
baumannii ACICU]
gi|183208616|gb|ACC56014.1| Ribonucleotide reductase, beta subunit [Acinetobacter baumannii
ACICU]
Length = 427
Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats.
Identities = 79/124 (63%), Positives = 97/124 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423
Query: 121 ELKW 124
L W
Sbjct: 424 ALSW 427
>gi|70731866|ref|YP_261608.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
fluorescens Pf-5]
gi|68346165|gb|AAY93771.1| ribonucleoside-diphosphate reductase, beta subunit, putative
[Pseudomonas fluorescens Pf-5]
Length = 415
Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410
Query: 121 ELKWD 125
L WD
Sbjct: 411 ALSWD 415
>gi|114332419|ref|YP_748641.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosomonas
eutropha C91]
gi|114309433|gb|ABI60676.1| Ribonucleoside-diphosphate reductase [Nitrosomonas eutropha C91]
Length = 377
Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats.
Identities = 81/125 (64%), Positives = 101/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGIDVINQIK+ENPHLWT+EF+++ ++ +A LE YA +TMP+G +GL
Sbjct: 253 LRDESMHCNFGIDVINQIKLENPHLWTREFREEISALMRKAVELEYRYAEDTMPRGVLGL 312
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP ++Y++FI NRR HQIGL+PLF NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 313 NAPMFKEYLRFIINRRSHQIGLDPLFPEAGNPFPWMSEMVDLKKEKNFFETRVIEYQTGG 372
Query: 121 ELKWD 125
L WD
Sbjct: 373 VLSWD 377
>gi|75677068|ref|YP_319489.1| ribonucleotide-diphosphate reductase subunit beta [Nitrobacter
winogradskyi Nb-255]
gi|74421938|gb|ABA06137.1| ribonucleotide reductase [Nitrobacter winogradskyi Nb-255]
Length = 391
Score = 153 bits (386), Expect = 8e-36, Method: Composition-based stats.
Identities = 86/125 (68%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENPHLW+K FQ++ R ML A LE AY +TMP+GF+GL
Sbjct: 267 LRDESIHLNFGIDIINQIKIENPHLWSKPFQEEVRAMLKNAADLEAAYGRDTMPRGFLGL 326
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA CE YM IANRRC Q+GL P+F +NPFPWMSE +DLKKEKNFFETRV EYQ G
Sbjct: 327 NATLCETYMHVIANRRCAQLGLAPVFPDADNPFPWMSEAMDLKKEKNFFETRVIEYQNGG 386
Query: 121 ELKWD 125
L WD
Sbjct: 387 ALAWD 391
>gi|262373382|ref|ZP_06066661.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
junii SH205]
gi|262313407|gb|EEY94492.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
junii SH205]
Length = 427
Score = 153 bits (386), Expect = 8e-36, Method: Composition-based stats.
Identities = 79/124 (63%), Positives = 97/124 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423
Query: 121 ELKW 124
L W
Sbjct: 424 ALSW 427
>gi|331006663|ref|ZP_08329944.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
proteobacterium IMCC1989]
gi|330419531|gb|EGG93916.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
proteobacterium IMCC1989]
Length = 444
Score = 153 bits (386), Expect = 8e-36, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 100/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIK+ENPHLWT+EF+ + M+ E T LEIAYA +TMP+G +G+
Sbjct: 320 LRDESMHLNFGIDIINQIKLENPHLWTEEFKAEVTQMVLEGTELEIAYARDTMPRGVLGM 379
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+QFI+NRR Q+GL + +NPFPWMSE++DL+KEKNFFETRV EYQ G
Sbjct: 380 NAAMMEEYLQFISNRRLAQLGLTEQYPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 439
Query: 121 ELKWD 125
L W+
Sbjct: 440 ALTWE 444
>gi|289208615|ref|YP_003460681.1| ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. K90mix]
gi|288944246|gb|ADC71945.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. K90mix]
Length = 412
Score = 153 bits (386), Expect = 9e-36, Method: Composition-based stats.
Identities = 82/125 (65%), Positives = 102/125 (81%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H+NFGIDVINQIK+ENPHLWT+EF+ + RT++ +A LE YA +TMP+G +G+
Sbjct: 288 LRDESMHMNFGIDVINQIKVENPHLWTEEFKNEMRTLISDAVELEAQYARDTMPRGVLGM 347
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+ FIANRRC QIGL ++ +NPFPWMSEV+DLKKEKNFFETRVTEYQ G
Sbjct: 348 NAQMFEEYLHFIANRRCAQIGLAEMYPGADNPFPWMSEVLDLKKEKNFFETRVTEYQTGG 407
Query: 121 ELKWD 125
L WD
Sbjct: 408 ALSWD 412
>gi|169634186|ref|YP_001707922.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
baumannii SDF]
gi|169152978|emb|CAP02026.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
baumannii]
Length = 427
Score = 153 bits (386), Expect = 9e-36, Method: Composition-based stats.
Identities = 79/124 (63%), Positives = 97/124 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423
Query: 121 ELKW 124
L W
Sbjct: 424 ALSW 427
>gi|291615085|ref|YP_003525242.1| ribonucleoside-diphosphate reductase [Sideroxydans lithotrophicus
ES-1]
gi|291585197|gb|ADE12855.1| Ribonucleoside-diphosphate reductase [Sideroxydans lithotrophicus
ES-1]
Length = 382
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 101/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFG+DVINQIK+ENPHLWT F+++ R ++ + LE YA +TMP+G +GL
Sbjct: 258 LRDESMHLNFGVDVINQIKLENPHLWTPAFREEVRGLIQKGVELEYRYAEDTMPRGVLGL 317
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA ++Y++FIANRRC QIG++ L++ NPFPWM+E+IDLKKEKNFFETRVTEYQ G
Sbjct: 318 NAGMFKEYLRFIANRRCQQIGVDMLYQGATNPFPWMAEMIDLKKEKNFFETRVTEYQTGG 377
Query: 121 ELKWD 125
L WD
Sbjct: 378 ALSWD 382
>gi|325272776|ref|ZP_08139120.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas sp.
TJI-51]
gi|324102083|gb|EGB99585.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas sp.
TJI-51]
Length = 416
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW ++++ M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411
Query: 121 ELKWD 125
L WD
Sbjct: 412 ALSWD 416
>gi|90425007|ref|YP_533377.1| ribonucleotide-diphosphate reductase subunit beta [Rhodopseudomonas
palustris BisB18]
gi|90107021|gb|ABD89058.1| Ribonucleoside-diphosphate reductase [Rhodopseudomonas palustris
BisB18]
Length = 386
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 89/125 (71%), Positives = 100/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENP LWT FQ++ R ML EA LE AY+ +TMP+GF+GL
Sbjct: 262 LRDESIHLNFGIDVINQIKIENPKLWTAGFQEELRGMLQEAAELEAAYSRDTMPRGFLGL 321
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA CEQYM FI NRRC Q+GL P+F ENPFPWMSE +DLKKEKNFFETRV EYQ G
Sbjct: 322 NAALCEQYMHFITNRRCAQLGLAPIFAEVENPFPWMSETMDLKKEKNFFETRVIEYQNGG 381
Query: 121 ELKWD 125
L WD
Sbjct: 382 ALTWD 386
>gi|330892405|gb|EGH25066.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. mori str. 301020]
Length = 415
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410
Query: 121 ELKWD 125
L WD
Sbjct: 411 ALSWD 415
>gi|170720377|ref|YP_001748065.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
putida W619]
gi|169758380|gb|ACA71696.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida W619]
Length = 416
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW ++++ M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411
Query: 121 ELKWD 125
L WD
Sbjct: 412 ALSWD 416
>gi|254784923|ref|YP_003072351.1| ribonucleotide-diphosphate reductase subunit beta [Teredinibacter
turnerae T7901]
gi|237687536|gb|ACR14800.1| ribonucleoside-diphosphate reductase [Teredinibacter turnerae
T7901]
Length = 453
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 79/124 (63%), Positives = 99/124 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIK+ENPHLWT+ FQQ+ + M+ E T LEI YA +TMP+G +G+
Sbjct: 330 LRDESMHLNFGIDVINQIKLENPHLWTESFQQEVKQMVLEGTELEIGYARDTMPRGVLGM 389
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+ FIANRR Q+GL+ + +NPFPWMSE++DL+KEKNFFETRV EYQ G
Sbjct: 390 NAAIMEEYLHFIANRRLAQLGLKEAYPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 449
Query: 121 ELKW 124
L W
Sbjct: 450 ALSW 453
>gi|28868867|ref|NP_791486.1| ribonucleoside-diphosphate reductase subunit beta [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213969520|ref|ZP_03397656.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
syringae pv. tomato T1]
gi|301385974|ref|ZP_07234392.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. tomato Max13]
gi|302058701|ref|ZP_07250242.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. tomato K40]
gi|302134408|ref|ZP_07260398.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|28852106|gb|AAO55181.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213925616|gb|EEB59175.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
syringae pv. tomato T1]
gi|330960626|gb|EGH60886.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|331016758|gb|EGH96814.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. lachrymans str. M302278PT]
Length = 415
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410
Query: 121 ELKWD 125
L WD
Sbjct: 411 ALSWD 415
>gi|66046950|ref|YP_236791.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. syringae B728a]
gi|237798938|ref|ZP_04587399.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|237806191|ref|ZP_04592895.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|63257657|gb|AAY38753.1| Ribonucleoside-diphosphate reductase [Pseudomonas syringae pv.
syringae B728a]
gi|330980156|gb|EGH78342.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. aptata str. DSM 50252]
gi|331021792|gb|EGI01849.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331027304|gb|EGI07359.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. oryzae str. 1_6]
Length = 415
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410
Query: 121 ELKWD 125
L WD
Sbjct: 411 ALSWD 415
>gi|262369327|ref|ZP_06062655.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
johnsonii SH046]
gi|262315395|gb|EEY96434.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
johnsonii SH046]
Length = 427
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 77/124 (62%), Positives = 96/124 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENP LWT EFQ++ M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPSLWTAEFQEEIIQMILEGTMLEIEYARDTMPRGVLGM 363
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G
Sbjct: 364 NAAMMEEYLKFICNRRLAQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423
Query: 121 ELKW 124
L W
Sbjct: 424 ALSW 427
>gi|71737432|ref|YP_275887.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|257485935|ref|ZP_05639976.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. tabaci ATCC 11528]
gi|289628680|ref|ZP_06461634.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. aesculi str. NCPPB3681]
gi|289648392|ref|ZP_06479735.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. aesculi str. 2250]
gi|298487941|ref|ZP_07005980.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|302184861|ref|ZP_07261534.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. syringae 642]
gi|71557985|gb|AAZ37196.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|298157492|gb|EFH98573.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|330866023|gb|EGH00732.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330896997|gb|EGH28545.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. japonica str. M301072PT]
gi|330986742|gb|EGH84845.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|331010341|gb|EGH90397.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. tabaci ATCC 11528]
Length = 415
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410
Query: 121 ELKWD 125
L WD
Sbjct: 411 ALSWD 415
>gi|320323423|gb|EFW79511.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. glycinea str. B076]
gi|320327620|gb|EFW83632.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330876273|gb|EGH10422.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 415
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410
Query: 121 ELKWD 125
L WD
Sbjct: 411 ALSWD 415
>gi|312960686|ref|ZP_07775192.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
fluorescens WH6]
gi|311285212|gb|EFQ63787.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
fluorescens WH6]
Length = 416
Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411
Query: 121 ELKWD 125
L WD
Sbjct: 412 ALSWD 416
>gi|104780527|ref|YP_607025.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
entomophila L48]
gi|95109514|emb|CAK14215.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
entomophila L48]
Length = 415
Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW ++++ M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410
Query: 121 ELKWD 125
L WD
Sbjct: 411 ALSWD 415
>gi|330880140|gb|EGH14289.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. morsprunorum str. M302280PT]
gi|330966559|gb|EGH66819.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. actinidiae str. M302091]
Length = 415
Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 350
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 351 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410
Query: 121 ELKWD 125
L WD
Sbjct: 411 ALSWD 415
>gi|229590245|ref|YP_002872364.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
fluorescens SBW25]
gi|229362111|emb|CAY49013.1| putative ribonucleoside-diphosphate reductase beta chain
[Pseudomonas fluorescens SBW25]
Length = 416
Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411
Query: 121 ELKWD 125
L WD
Sbjct: 412 ALSWD 416
>gi|300309722|ref|YP_003773814.1| transmembrane ribonucleoside reductase small subunit
[Herbaspirillum seropedicae SmR1]
gi|300072507|gb|ADJ61906.1| transmembrane ribonucleoside reductase (small chain) protein
[Herbaspirillum seropedicae SmR1]
Length = 388
Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+IN +K+ENPHLWT EF+++ +++ A LE YA +TMP+G +GL
Sbjct: 264 LRDESMHCNFGIDLINTVKMENPHLWTPEFREEIKSLFLRAVELEYRYAEDTMPRGVLGL 323
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP + Y++FIANRR QIGL+PLF ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 324 NAPMFKSYLRFIANRRAQQIGLDPLFAQEENPFPWMSEMIDLKKERNFFETRVIEYQTGG 383
Query: 121 ELKWD 125
L W+
Sbjct: 384 ALSWE 388
>gi|300784783|ref|YP_003765074.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis
mediterranei U32]
gi|299794297|gb|ADJ44672.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis
mediterranei U32]
Length = 357
Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats.
Identities = 87/125 (69%), Positives = 100/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID INQIKIENPHLWT+EFQ + R ML EA LE+ YA +TMP+G +GL
Sbjct: 233 LRDESIHLNFGIDCINQIKIENPHLWTEEFQAEVRGMLKEACELEVKYARDTMPRGMLGL 292
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A CEQYM F+ +RR QIGL P+F TENPFPWMSE +DLKKEKNFFETRV EYQ G
Sbjct: 293 SAQLCEQYMHFVTDRRAQQIGLAPIFGETENPFPWMSEAMDLKKEKNFFETRVIEYQSGG 352
Query: 121 ELKWD 125
L WD
Sbjct: 353 ALDWD 357
>gi|26987912|ref|NP_743337.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
putida KT2440]
gi|167035231|ref|YP_001670462.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
putida GB-1]
gi|24982621|gb|AAN66801.1|AE016309_3 ribonucleoside reductase, beta subunit [Pseudomonas putida KT2440]
gi|166861719|gb|ABZ00127.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida GB-1]
gi|313497534|gb|ADR58900.1| NrdB [Pseudomonas putida BIRD-1]
Length = 416
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW ++++ M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411
Query: 121 ELKWD 125
L WD
Sbjct: 412 ALSWD 416
>gi|54294662|ref|YP_127077.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
pneumophila str. Lens]
gi|53754494|emb|CAH15978.1| hypothetical protein lpl1739 [Legionella pneumophila str. Lens]
Length = 367
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 95/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H+NFGIDVINQIKIENPHLWT EF+ + ++ E LE YA +TMP G +G+
Sbjct: 241 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEIIQLIREGVELEYQYARDTMPHGILGM 300
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+ FIANRR +QIGL + ENPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 301 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 360
Query: 121 ELKWD 125
L WD
Sbjct: 361 TLSWD 365
>gi|262280153|ref|ZP_06057938.1| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
calcoaceticus RUH2202]
gi|262260504|gb|EEY79237.1| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
calcoaceticus RUH2202]
Length = 427
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 78/124 (62%), Positives = 97/124 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENPHLW+ EFQQ+ M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWSAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 363
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423
Query: 121 ELKW 124
L W
Sbjct: 424 ALSW 427
>gi|119504228|ref|ZP_01626308.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
proteobacterium HTCC2080]
gi|119459736|gb|EAW40831.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
proteobacterium HTCC2080]
Length = 419
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 82/125 (65%), Positives = 100/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIK+ENP LWT EFQQ++ M+ E T LEIAYA +TMP+G +G+
Sbjct: 295 LRDESMHLNFGIDVINQIKLENPLLWTPEFQQEAIQMILEGTELEIAYARDTMPRGVLGM 354
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+QFI NRR +Q+GL F +NPFPWMSE++DL+KEKNFFETRV EYQ G
Sbjct: 355 NAAMMEEYLQFICNRRLNQVGLPEQFPGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 414
Query: 121 ELKWD 125
L WD
Sbjct: 415 ALTWD 419
>gi|327480258|gb|AEA83568.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
stutzeri DSM 4166]
Length = 415
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENPHLW E + ++ M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDMINQIKIENPHLWNAEMKDEATQMILQGTQLEIEYARDTMPRGVLGM 350
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410
Query: 121 ELKWD 125
L WD
Sbjct: 411 ALSWD 415
>gi|229592166|ref|YP_002874285.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
fluorescens SBW25]
gi|229364032|emb|CAY51597.1| ribonucleoside-diphosphate reductase beta chain [Pseudomonas
fluorescens SBW25]
Length = 416
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 351
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411
Query: 121 ELKWD 125
L WD
Sbjct: 412 ALSWD 416
>gi|198284354|ref|YP_002220675.1| ribonucleotide-diphosphate reductase subunit beta
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|198248875|gb|ACH84468.1| Ribonucleoside-diphosphate reductase [Acidithiobacillus
ferrooxidans ATCC 53993]
Length = 374
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 73/125 (58%), Positives = 94/125 (75%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+ NQIK+ENP LWT+ FQQ+ ++ LE AYA +TMP+G +GL
Sbjct: 250 LRDESMHCNFGIDMANQIKVENPQLWTEAFQQEIIDLIRRGVELECAYADDTMPRGVLGL 309
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP +Y+++I NRR Q+GL + +NPFPWMSE++DLKKEKNFFETRVTEYQ G
Sbjct: 310 NAPVFREYVKYIGNRRLVQLGLPQQYPGVQNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 369
Query: 121 ELKWD 125
L W+
Sbjct: 370 ALSWE 374
>gi|92119123|ref|YP_578852.1| ribonucleotide-diphosphate reductase subunit beta [Nitrobacter
hamburgensis X14]
gi|91802017|gb|ABE64392.1| Ribonucleoside-diphosphate reductase [Nitrobacter hamburgensis X14]
Length = 416
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 88/125 (70%), Positives = 100/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW+K FQ++ R ML A LE AY +TMP+GF+GL
Sbjct: 292 LRDESIHLNFGIDVINQIKIENPHLWSKPFQEEVRAMLKNAAELEAAYGRDTMPRGFLGL 351
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA CEQYM IANRRC Q+GL P+F +NPFPWMSE +DLKKEKNFFETRV EYQ G
Sbjct: 352 NAALCEQYMHVIANRRCAQLGLAPVFAEADNPFPWMSEAMDLKKEKNFFETRVIEYQNGG 411
Query: 121 ELKWD 125
L WD
Sbjct: 412 ALAWD 416
>gi|254496936|ref|ZP_05109775.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
drancourtii LLAP12]
gi|254353845|gb|EET12541.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
drancourtii LLAP12]
Length = 369
Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 77/125 (61%), Positives = 96/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H+NFGIDVINQIKIENPHLWT EF+++ ++ + +E YA +TMP G +G+
Sbjct: 240 LRDESMHMNFGIDVINQIKIENPHLWTPEFKEEIIQLIKDGVAMEYQYAKDTMPHGILGM 299
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+ FIANRR +QIGL + ENPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 300 NAEMFEEYLHFIANRRLNQIGLPEQYPGAENPFPWMSEMMDLKKEKNFFETRVIEYQAGG 359
Query: 121 ELKWD 125
L WD
Sbjct: 360 TLSWD 364
>gi|54297688|ref|YP_124057.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
pneumophila str. Paris]
gi|53751473|emb|CAH12891.1| hypothetical protein lpp1739 [Legionella pneumophila str. Paris]
Length = 367
Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 95/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H+NFGIDVINQIKIENPHLWT EF+ + ++ E LE YA +TMP G +G+
Sbjct: 241 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEIIQLIREGVELEYQYARDTMPHGILGM 300
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+ FIANRR +QIGL + ENPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 301 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 360
Query: 121 ELKWD 125
L WD
Sbjct: 361 TLSWD 365
>gi|212212091|ref|YP_002303027.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
burnetii CbuG_Q212]
gi|212010501|gb|ACJ17882.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
CbuG_Q212]
Length = 401
Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 81/125 (64%), Positives = 96/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H+NFGIDVINQIKIENPHLW K FQ++ M+ E LE YA +TMP+G +GL
Sbjct: 276 LRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYAKDTMPRGILGL 335
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+Q+IANRRC QIGL F +N FPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 336 NANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFFETRVIEYQAGG 395
Query: 121 ELKWD 125
LKWD
Sbjct: 396 TLKWD 400
>gi|330504346|ref|YP_004381215.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
mendocina NK-01]
gi|328918632|gb|AEB59463.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
mendocina NK-01]
Length = 416
Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW + + ++ M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGM 351
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411
Query: 121 ELKWD 125
L WD
Sbjct: 412 ALSWD 416
>gi|261855609|ref|YP_003262892.1| ribonucleoside-diphosphate reductase [Halothiobacillus neapolitanus
c2]
gi|261836078|gb|ACX95845.1| Ribonucleoside-diphosphate reductase [Halothiobacillus neapolitanus
c2]
Length = 398
Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 88/124 (70%), Positives = 100/124 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
MRDES+H+NFGIDVINQIKIENPHLWT++F+ + ML EA LEIAYA +TMP G +GL
Sbjct: 275 MRDESIHMNFGIDVINQIKIENPHLWTEDFKAEVTRMLKEAAELEIAYARDTMPHGLLGL 334
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA C +Y+ FIANRRC+QIGL LF NPFPWMSEVIDLKKEKNFFETRVT+YQ G
Sbjct: 335 NAEMCAEYLHFIANRRCNQIGLAELFPGATNPFPWMSEVIDLKKEKNFFETRVTDYQTGG 394
Query: 121 ELKW 124
L W
Sbjct: 395 ALNW 398
>gi|254780136|ref|YP_003064549.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
Liberibacter asiaticus str. psy62]
gi|254781006|ref|YP_003065419.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
Liberibacter asiaticus str. psy62]
gi|254039813|gb|ACT56609.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
Liberibacter asiaticus str. psy62]
gi|254040683|gb|ACT57479.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
Liberibacter asiaticus str. psy62]
Length = 125
Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 125/125 (100%), Positives = 125/125 (100%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL
Sbjct: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA
Sbjct: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
Query: 121 ELKWD 125
ELKWD
Sbjct: 121 ELKWD 125
>gi|29654845|ref|NP_820537.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
burnetii RSA 493]
gi|154705923|ref|YP_001423853.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
burnetii Dugway 5J108-111]
gi|161831080|ref|YP_001597389.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
burnetii RSA 331]
gi|29542113|gb|AAO91051.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
RSA 493]
gi|154355209|gb|ABS76671.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
Dugway 5J108-111]
gi|161762947|gb|ABX78589.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
burnetii RSA 331]
Length = 401
Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 81/125 (64%), Positives = 96/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H+NFGIDVINQIKIENPHLW K FQ++ M+ E LE YA +TMP+G +GL
Sbjct: 276 LRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYAKDTMPRGILGL 335
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+Q+IANRRC QIGL F +N FPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 336 NANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFFETRVIEYQAGG 395
Query: 121 ELKWD 125
LKWD
Sbjct: 396 TLKWD 400
>gi|146308172|ref|YP_001188637.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
mendocina ymp]
gi|145576373|gb|ABP85905.1| Ribonucleoside-diphosphate reductase [Pseudomonas mendocina ymp]
Length = 416
Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW + + ++ M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGM 351
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 352 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411
Query: 121 ELKWD 125
L WD
Sbjct: 412 ALSWD 416
>gi|90022104|ref|YP_527931.1| ribonucleotide-diphosphate reductase subunit beta [Saccharophagus
degradans 2-40]
gi|89951704|gb|ABD81719.1| Class Ia ribonucleoside-diphosphate reductase beta subunit
[Saccharophagus degradans 2-40]
Length = 423
Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 101/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIK+ENPHLWT+EFQ +++ M+ E T LEIAYA +TMP+G +G+
Sbjct: 299 LRDESMHLNFGIDVINQIKLENPHLWTEEFQAETKQMILEGTELEIAYARDTMPRGVLGM 358
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+ FIANRR Q+GL + +NPFPWMSE++DL+KEKNFFETRV EYQ G
Sbjct: 359 NAAMMEEYLHFIANRRMAQLGLAEAYPGAKNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 418
Query: 121 ELKWD 125
L W+
Sbjct: 419 ALSWE 423
>gi|302877617|ref|YP_003846181.1| Ribonucleoside-diphosphate reductase [Gallionella capsiferriformans
ES-2]
gi|302580406|gb|ADL54417.1| Ribonucleoside-diphosphate reductase [Gallionella capsiferriformans
ES-2]
Length = 365
Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 102/125 (81%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFG+D+INQIK+ENPHLWT F+++ R ++ + LE AYA +TMP+G +GL
Sbjct: 241 LRDESMHLNFGVDLINQIKMENPHLWTAAFREEIRGLMQKGVELEYAYAEDTMPRGILGL 300
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA ++Y++FIANRRC QIG++ L++ NPFPWMSE+IDLKKEKNFFE+RVTEYQ G
Sbjct: 301 NATMFKEYLRFIANRRCQQIGVDILYQGATNPFPWMSEMIDLKKEKNFFESRVTEYQTGG 360
Query: 121 ELKWD 125
L WD
Sbjct: 361 TLSWD 365
>gi|153208286|ref|ZP_01946665.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
burnetii 'MSU Goat Q177']
gi|165919229|ref|ZP_02219315.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
burnetii RSA 334]
gi|212219268|ref|YP_002306055.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
burnetii CbuK_Q154]
gi|120576070|gb|EAX32694.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
burnetii 'MSU Goat Q177']
gi|165917090|gb|EDR35694.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
burnetii RSA 334]
gi|212013530|gb|ACJ20910.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
CbuK_Q154]
Length = 401
Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 81/125 (64%), Positives = 96/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H+NFGIDVINQIKIENPHLW K FQ++ M+ E LE YA +TMP+G +GL
Sbjct: 276 LRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYAKDTMPRGILGL 335
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+Q+IANRRC QIGL F +N FPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 336 NANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFFETRVIEYQAGG 395
Query: 121 ELKWD 125
LKWD
Sbjct: 396 TLKWD 400
>gi|299771426|ref|YP_003733452.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
sp. DR1]
gi|298701514|gb|ADI92079.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
sp. DR1]
Length = 427
Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats.
Identities = 78/124 (62%), Positives = 97/124 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENPHLW+ EFQQ+ M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWSAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 363
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 423
Query: 121 ELKW 124
L W
Sbjct: 424 ALSW 427
>gi|77460516|ref|YP_350023.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
fluorescens Pf0-1]
gi|77384519|gb|ABA76032.1| ribonucleoside-diphosphate reductase beta chain [Pseudomonas
fluorescens Pf0-1]
Length = 416
Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+
Sbjct: 292 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEASQMILQGTQLEIEYARDTMPRGVLGM 351
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 352 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 411
Query: 121 ELKWD 125
L WD
Sbjct: 412 ALSWD 416
>gi|262376783|ref|ZP_06070011.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
lwoffii SH145]
gi|262308493|gb|EEY89628.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
lwoffii SH145]
Length = 427
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 78/124 (62%), Positives = 97/124 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENP LWT EFQ++ M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPGLWTTEFQEEIIQMILEGTMLEIEYARDTMPRGVLGM 363
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y++FIANRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G
Sbjct: 364 NAGMMEEYLKFIANRRLAQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFFETRVTDYQTGG 423
Query: 121 ELKW 124
L W
Sbjct: 424 ALSW 427
>gi|294840478|ref|ZP_06785161.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
sp. 6014059]
Length = 427
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 78/124 (62%), Positives = 96/124 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+
Sbjct: 304 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 363
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y++FI NRR Q+GL F NPF WMS ++DL+KEKNFFETRVT+YQ G
Sbjct: 364 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSGMMDLRKEKNFFETRVTDYQTGG 423
Query: 121 ELKW 124
L W
Sbjct: 424 ALSW 427
>gi|218665361|ref|YP_002427016.1| ribonucleoside-diphosphate reductase, beta subunit
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|218517574|gb|ACK78160.1| ribonucleoside-diphosphate reductase, beta subunit
[Acidithiobacillus ferrooxidans ATCC 23270]
Length = 380
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 73/125 (58%), Positives = 94/125 (75%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+ NQIK+ENP LWT+ FQQ+ ++ LE AYA +TMP+G +GL
Sbjct: 256 LRDESMHCNFGIDMANQIKVENPQLWTEAFQQEIIDLIRRGVELECAYADDTMPRGVLGL 315
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NAP +Y+++I NRR Q+GL + +NPFPWMSE++DLKKEKNFFETRVTEYQ G
Sbjct: 316 NAPVFREYVKYIGNRRLVQLGLPQQYPGVQNPFPWMSEMMDLKKEKNFFETRVTEYQTGG 375
Query: 121 ELKWD 125
L W+
Sbjct: 376 ALSWE 380
>gi|110833571|ref|YP_692430.1| ribonucleotide-diphosphate reductase subunit beta [Alcanivorax
borkumensis SK2]
gi|110646682|emb|CAL16158.1| ribonucleoside reductase, beta subunit [Alcanivorax borkumensis
SK2]
Length = 430
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H+NFGIDVINQIK+ENPHLW + + K+ M+ E T LEI YA +TMP+G +G+
Sbjct: 306 LRDESMHVNFGIDVINQIKLENPHLWDAQMRDKATQMILEGTELEIQYARDTMPRGVLGM 365
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+QFIANRR Q+GL FK NPFPWMSE++DL+KEKNFFETRVTEYQ G
Sbjct: 366 NAAMMEEYLQFIANRRLAQLGLPEQFKGVNNPFPWMSEIMDLRKEKNFFETRVTEYQVGG 425
Query: 121 ELKWD 125
L W+
Sbjct: 426 ALSWE 430
>gi|15596352|ref|NP_249846.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
aeruginosa PAO1]
gi|107100605|ref|ZP_01364523.1| hypothetical protein PaerPA_01001630 [Pseudomonas aeruginosa PACS2]
gi|116049087|ref|YP_792111.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
aeruginosa UCBPP-PA14]
gi|152988648|ref|YP_001349579.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
aeruginosa PA7]
gi|218892881|ref|YP_002441750.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
aeruginosa LESB58]
gi|254239525|ref|ZP_04932847.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa 2192]
gi|296390475|ref|ZP_06879950.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
aeruginosa PAb1]
gi|313106126|ref|ZP_07792381.1| NrdB, tyrosyl radical-harboring component of class Ia
ribonucleotide reductase [Pseudomonas aeruginosa 39016]
gi|9947077|gb|AAG04544.1|AE004545_7 NrdB, tyrosyl radical-harboring component of class Ia
ribonucleotide reductase [Pseudomonas aeruginosa PAO1]
gi|115584308|gb|ABJ10323.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126192903|gb|EAZ56966.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa 2192]
gi|150963806|gb|ABR85831.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa PA7]
gi|187939552|gb|ACD38699.1| ribonucleoside reductase small chain [Pseudomonas aeruginosa]
gi|218773109|emb|CAW28921.1| NrdB, tyrosyl radical-harboring component of class Ia
ribonucleotide reductase [Pseudomonas aeruginosa LESB58]
gi|310878883|gb|EFQ37477.1| NrdB, tyrosyl radical-harboring component of class Ia
ribonucleotide reductase [Pseudomonas aeruginosa 39016]
Length = 415
Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW + + ++ M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGM 350
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 351 NAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410
Query: 121 ELKWD 125
L WD
Sbjct: 411 ALSWD 415
>gi|284032753|ref|YP_003382684.1| Ribonucleoside-diphosphate reductase [Kribbella flavida DSM 17836]
gi|283812046|gb|ADB33885.1| Ribonucleoside-diphosphate reductase [Kribbella flavida DSM 17836]
Length = 354
Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats.
Identities = 85/125 (68%), Positives = 94/125 (75%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLHLNFGID INQIK+ENPHLWT FQ + R ML EA LE+AY T+P G +GL
Sbjct: 230 LRDESLHLNFGIDCINQIKLENPHLWTPAFQAEVRRMLTEACELEVAYGRATLPNGMLGL 289
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
A CEQYM FI +RR Q+GL PLF T NPF WMSEV+DLKKEKNFFETRV EYQ G
Sbjct: 290 TAELCEQYMHFITDRRAEQLGLAPLFGETRNPFGWMSEVMDLKKEKNFFETRVIEYQSGG 349
Query: 121 ELKWD 125
L WD
Sbjct: 350 GLSWD 354
>gi|254483523|ref|ZP_05096750.1| ribonucleoside-diphosphate reductase, beta subunit [marine gamma
proteobacterium HTCC2148]
gi|214036244|gb|EEB76924.1| ribonucleoside-diphosphate reductase, beta subunit [marine gamma
proteobacterium HTCC2148]
Length = 425
Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIK+ENP+LWT+ FQQ+ M+ E T +EI YA +TMP+G +G+
Sbjct: 301 LRDESMHLNFGIDVINQIKLENPNLWTETFQQEVIQMILEGTEIEIQYARDTMPRGVLGM 360
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+ FIANRR Q+GL F +NPFPWMSE++DL+KEKNFFETRV EYQ G
Sbjct: 361 NAAIMEEYLHFIANRRLSQLGLPEQFAGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 420
Query: 121 ELKWD 125
L WD
Sbjct: 421 ALSWD 425
>gi|121608466|ref|YP_996273.1| ribonucleotide-diphosphate reductase subunit beta
[Verminephrobacter eiseniae EF01-2]
gi|121553106|gb|ABM57255.1| Ribonucleoside-diphosphate reductase [Verminephrobacter eiseniae
EF01-2]
Length = 399
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 75/125 (60%), Positives = 92/125 (73%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID+INQIK+ENP LWT F+ + + +A LE YA +TMP G +G+
Sbjct: 275 LRDESMHCNFGIDLINQIKLENPLLWTTAFKAEIEALFLQAVELEYRYAEDTMPHGVLGM 334
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y+++IANRR QIGLE LF NPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 335 NASMFKGYLRYIANRRATQIGLETLFPQETNPFPWMSEMIDLKKERNFFETRVIEYQSGG 394
Query: 121 ELKWD 125
L WD
Sbjct: 395 ALCWD 399
>gi|114321252|ref|YP_742935.1| ribonucleotide-diphosphate reductase subunit beta [Alkalilimnicola
ehrlichii MLHE-1]
gi|114227646|gb|ABI57445.1| Ribonucleoside-diphosphate reductase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 354
Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats.
Identities = 83/125 (66%), Positives = 102/125 (81%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQI+ ENP LWT +F+Q+ TML EA LE+AYA +TMP+G +GL
Sbjct: 230 LRDESIHLNFGIDVINQIRHENPELWTNDFEQEVLTMLREAVELEVAYARDTMPRGMLGL 289
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA CE+YM FI NRRC Q+GL+ L+ NPFPWMSEV+DL+KEKNFFETRVT+Y+ G
Sbjct: 290 NADMCEEYMHFITNRRCAQLGLKELYPGATNPFPWMSEVMDLQKEKNFFETRVTDYRTGG 349
Query: 121 ELKWD 125
L+WD
Sbjct: 350 ALQWD 354
>gi|325121074|gb|ADY80597.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
calcoaceticus PHEA-2]
Length = 370
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 79/124 (63%), Positives = 97/124 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+
Sbjct: 247 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVVQMIVEGTMLEIEYARDTMPRGVLGM 306
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G
Sbjct: 307 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 366
Query: 121 ELKW 124
L W
Sbjct: 367 ALSW 370
>gi|146282010|ref|YP_001172163.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
stutzeri A1501]
gi|145570215|gb|ABP79321.1| ribonucleoside reductase, small chain [Pseudomonas stutzeri A1501]
Length = 415
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENPHLW E + ++ M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDMINQIKIENPHLWDAEMKDEATQMILQGTQLEIEYARDTMPRGVLGM 350
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 351 NASMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 410
Query: 121 ELKWD 125
L WD
Sbjct: 411 ALSWD 415
>gi|119478322|ref|ZP_01618353.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
proteobacterium HTCC2143]
gi|119448662|gb|EAW29907.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
proteobacterium HTCC2143]
Length = 422
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 76/125 (60%), Positives = 101/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIK+ENP LW+++FQQ+ M+ E T LEI YA ++MP+G +G+
Sbjct: 298 LRDESMHLNFGIDVINQIKLENPQLWSEKFQQEIIQMILEGTQLEIEYARDSMPRGVLGM 357
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+QFI+NRR +Q+GL ++ +NPFPWMSE++DL+KEKNFFETRV EYQ G
Sbjct: 358 NAAMMEEYLQFISNRRLNQLGLPEQYQGAQNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 417
Query: 121 ELKWD 125
L W+
Sbjct: 418 ALNWE 422
>gi|148359319|ref|YP_001250526.1| ribonucleoside-diphosphate reductase subunit beta [Legionella
pneumophila str. Corby]
gi|296107366|ref|YP_003619066.1| ribonucleoside-diphosphate reductase beta chain [Legionella
pneumophila 2300/99 Alcoy]
gi|148281092|gb|ABQ55180.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
pneumophila str. Corby]
gi|295649267|gb|ADG25114.1| ribonucleoside-diphosphate reductase beta chain [Legionella
pneumophila 2300/99 Alcoy]
gi|307610475|emb|CBX00047.1| hypothetical protein LPW_18021 [Legionella pneumophila 130b]
Length = 367
Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 95/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H+NFGIDVINQIKIENPHLWT EF+ + ++ E LE YA +TMP G +G+
Sbjct: 241 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEMIQLIREGVELEYQYARDTMPHGILGM 300
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+ FIANRR +QIGL + ENPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 301 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 360
Query: 121 ELKWD 125
L WD
Sbjct: 361 TLSWD 365
>gi|52842002|ref|YP_095801.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|52629113|gb|AAU27854.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
Length = 381
Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 95/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H+NFGIDVINQIKIENPHLWT EF+ + ++ E LE YA +TMP G +G+
Sbjct: 255 LRDESMHMNFGIDVINQIKIENPHLWTPEFKNEMIQLIREGVELEYQYARDTMPHGILGM 314
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+ FIANRR +QIGL + ENPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 315 NAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQAGG 374
Query: 121 ELKWD 125
L WD
Sbjct: 375 TLSWD 379
>gi|299134880|ref|ZP_07028072.1| Ribonucleoside-diphosphate reductase [Afipia sp. 1NLS2]
gi|298590690|gb|EFI50893.1| Ribonucleoside-diphosphate reductase [Afipia sp. 1NLS2]
Length = 373
Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats.
Identities = 89/125 (71%), Positives = 101/125 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIK+EN HLWTK FQ+ R M+ +A LE AY +TMP+GF+GL
Sbjct: 249 LRDESIHLNFGIDVINQIKLENQHLWTKAFQEDVRGMIRDAAELEAAYGRDTMPRGFLGL 308
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA CEQYM FIANRRC QIGL P+F TENPFPWMSE +DLKKEKNFFETRV EYQ G
Sbjct: 309 NAALCEQYMHFIANRRCAQIGLTPVFPETENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 368
Query: 121 ELKWD 125
L W+
Sbjct: 369 ALSWE 373
>gi|257055668|ref|YP_003133500.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis
DSM 43017]
gi|256585540|gb|ACU96673.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis
DSM 43017]
Length = 349
Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats.
Identities = 87/125 (69%), Positives = 103/125 (82%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFG+D INQIK ENPHLWT EFQQ+ R ML EA LE+AYAH+TMP+ +GL
Sbjct: 225 LRDESIHLNFGVDCINQIKAENPHLWTPEFQQQVRDMLVEACELEVAYAHDTMPRPMLGL 284
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A CEQYM FI +RR Q+GL+P+F ENPFPWMSEVIDL+KEKNFFETRVT+Y+ GA
Sbjct: 285 SAELCEQYMHFITDRRAAQLGLDPVFGERENPFPWMSEVIDLRKEKNFFETRVTDYRSGA 344
Query: 121 ELKWD 125
L WD
Sbjct: 345 ALAWD 349
>gi|126640804|ref|YP_001083788.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
baumannii ATCC 17978]
gi|322506921|gb|ADX02375.1| nrdB [Acinetobacter baumannii 1656-2]
gi|323516789|gb|ADX91170.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
baumannii TCDC-AB0715]
Length = 361
Score = 150 bits (378), Expect = 7e-35, Method: Composition-based stats.
Identities = 79/124 (63%), Positives = 97/124 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIKIENPHLWT EFQQ+ M+ E T+LEI YA +TMP+G +G+
Sbjct: 238 LRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGVLGM 297
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y++FI NRR Q+GL F NPF WMSE++DL+KEKNFFETRVT+YQ G
Sbjct: 298 NASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQTGG 357
Query: 121 ELKW 124
L W
Sbjct: 358 ALSW 361
>gi|270156779|ref|ZP_06185436.1| ribonucleotide-diphosphate reductase beta subunit [Legionella
longbeachae D-4968]
gi|289164772|ref|YP_003454910.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
longbeachae NSW150]
gi|269988804|gb|EEZ95058.1| ribonucleotide-diphosphate reductase beta subunit [Legionella
longbeachae D-4968]
gi|288857945|emb|CBJ11805.1| putative ribonucleoside-diphosphate reductase, beta subunit
[Legionella longbeachae NSW150]
Length = 366
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 77/125 (61%), Positives = 95/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H+NFGIDVINQIKIENPHLWT EF+++ ++ + LE YA +TMP+G +G+
Sbjct: 240 LRDESMHMNFGIDVINQIKIENPHLWTSEFKEEIIQLIRQGVDLEYQYAKDTMPQGILGM 299
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+ FIANRR QIGL + NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 300 NAEMFEEYLHFIANRRLTQIGLAEQYPGAVNPFPWMSEMMDLKKEKNFFETRVIEYQAGG 359
Query: 121 ELKWD 125
L WD
Sbjct: 360 TLSWD 364
>gi|119713586|gb|ABL97637.1| ribonucleotide-diphosphate reductase beta subunit [uncultured
marine bacterium EB0_39H12]
Length = 412
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+INQIK+ENPHLW ++ + ++ M+ E T LEI YA +TMP+G +G+
Sbjct: 288 LRDESMHLNFGIDMINQIKLENPHLWDEQMRHEAAQMILEGTELEIQYARDTMPRGILGM 347
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+QFIANRR QIGLE F+ NPFPWMSE++DL+KEKNFFETRV EYQ G
Sbjct: 348 NAGMMEEYLQFIANRRLVQIGLEEEFEGASNPFPWMSEIMDLRKEKNFFETRVIEYQTGG 407
Query: 121 ELKWD 125
L WD
Sbjct: 408 ALTWD 412
>gi|289677030|ref|ZP_06497920.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. syringae FF5]
Length = 243
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+
Sbjct: 119 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 178
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 179 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 238
Query: 121 ELKWD 125
L WD
Sbjct: 239 ALSWD 243
>gi|85714830|ref|ZP_01045816.1| ribonucleotide reductase [Nitrobacter sp. Nb-311A]
gi|85698316|gb|EAQ36187.1| ribonucleotide reductase [Nitrobacter sp. Nb-311A]
Length = 389
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 89/125 (71%), Positives = 99/125 (79%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLWTK FQ + R ML A LE AY +TMP+GF+GL
Sbjct: 265 LRDESIHLNFGIDVINQIKIENPHLWTKTFQDEVRAMLKNAAELEAAYGRDTMPRGFLGL 324
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA CE YM IANRRC Q+GL P+F T+NPFPWMSE +DLKKEKNFFETRV EYQ G
Sbjct: 325 NAALCETYMHVIANRRCAQLGLAPVFAETDNPFPWMSEAMDLKKEKNFFETRVIEYQNGG 384
Query: 121 ELKWD 125
L WD
Sbjct: 385 ALAWD 389
>gi|254429337|ref|ZP_05043044.1| ribonucleoside-diphosphate reductase, beta subunit [Alcanivorax sp.
DG881]
gi|196195506|gb|EDX90465.1| ribonucleoside-diphosphate reductase, beta subunit [Alcanivorax sp.
DG881]
Length = 355
Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H+NFGIDVINQIK+ENPHLW + + K+ M+ E LEI YA +TMP+G +G+
Sbjct: 231 LRDESMHVNFGIDVINQIKLENPHLWDAQMRDKATQMILEGAELEIQYARDTMPRGVLGM 290
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y+QFIANRR Q+GL FK NPFPWMSE++DL+KEKNFFETRVTEYQ G
Sbjct: 291 NAAMMEEYLQFIANRRLAQLGLPEQFKGVNNPFPWMSEIMDLRKEKNFFETRVTEYQVGG 350
Query: 121 ELKWD 125
L W+
Sbjct: 351 ALSWE 355
>gi|300022335|ref|YP_003754946.1| ribonucleoside-diphosphate reductase [Hyphomicrobium denitrificans
ATCC 51888]
gi|299524156|gb|ADJ22625.1| Ribonucleoside-diphosphate reductase [Hyphomicrobium denitrificans
ATCC 51888]
Length = 374
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 85/125 (68%), Positives = 97/125 (77%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIK EN HLW+K FQ + R ML +A LE AY +TMP G +GL
Sbjct: 250 LRDESIHLNFGIDVINQIKAENAHLWSKAFQDEVRGMLRDAAQLEAAYGRDTMPTGLLGL 309
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
N EQYM+FIANRRC Q+GL P+FK ENPFPWMSE +DLKKEKNFFETRV EYQ G
Sbjct: 310 NPGLTEQYMEFIANRRCAQLGLTPVFKDRENPFPWMSEAMDLKKEKNFFETRVIEYQNGG 369
Query: 121 ELKWD 125
L W+
Sbjct: 370 ALSWE 374
>gi|294339031|emb|CAZ87378.1| putative Ribonucleoside-diphosphate reductase (ribonucleoside
diphosphate reductase, beta subunit) [Thiomonas sp. 3As]
Length = 410
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 77/125 (61%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID++NQIK+ENPHLWT EF+++ + H+A LE YA +TMP+G +GL
Sbjct: 286 LRDESMHTNFGIDLVNQIKLENPHLWTPEFKRELTGLFHQAVELEYRYAEDTMPRGVLGL 345
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FIANRR QIGL+ +F ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 346 NASMFKGYLRFIANRRAVQIGLDAIFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 405
Query: 121 ELKWD 125
L W+
Sbjct: 406 ALSWE 410
>gi|312962626|ref|ZP_07777115.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
fluorescens WH6]
gi|311283001|gb|EFQ61593.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
fluorescens WH6]
Length = 136
Score = 147 bits (370), Expect = 6e-34, Method: Composition-based stats.
Identities = 80/125 (64%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+
Sbjct: 12 LRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGM 71
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G
Sbjct: 72 NAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 131
Query: 121 ELKWD 125
L WD
Sbjct: 132 ALSWD 136
>gi|296135014|ref|YP_003642256.1| Ribonucleoside-diphosphate reductase [Thiomonas intermedia K12]
gi|295795136|gb|ADG29926.1| Ribonucleoside-diphosphate reductase [Thiomonas intermedia K12]
Length = 402
Score = 147 bits (370), Expect = 7e-34, Method: Composition-based stats.
Identities = 77/125 (61%), Positives = 98/125 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H NFGID++NQIK+ENPHLWT EF+++ + H+A LE YA +TMP+G +GL
Sbjct: 278 LRDESMHTNFGIDLVNQIKLENPHLWTPEFKRELTGLFHQAVELEYRYAEDTMPRGVLGL 337
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA + Y++FIANRR QIGL+ +F ENPFPWMSE+IDLKKE+NFFETRV EYQ G
Sbjct: 338 NASMFKGYLRFIANRRAVQIGLDAIFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGG 397
Query: 121 ELKWD 125
L W+
Sbjct: 398 ALSWE 402
>gi|88812072|ref|ZP_01127324.1| ribonucleotide-diphosphate reductase beta subunit [Nitrococcus
mobilis Nb-231]
gi|88790576|gb|EAR21691.1| ribonucleotide-diphosphate reductase beta subunit [Nitrococcus
mobilis Nb-231]
Length = 370
Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats.
Identities = 78/125 (62%), Positives = 96/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIK ENPHLWT EFQ ++ + E+ LE+ YA +T+P+G +GL
Sbjct: 246 LRDESIHLNFGIDVINQIKQENPHLWTAEFQATAQRTILESMALEVDYARDTLPRGVLGL 305
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA E+Y++FI NRR QIGL F ENP PWMSE++DLKKEKNFFETRVTEY+ G
Sbjct: 306 NAAMIEEYLRFITNRRLAQIGLTEAFPGAENPLPWMSELVDLKKEKNFFETRVTEYRTGG 365
Query: 121 ELKWD 125
L W+
Sbjct: 366 ALSWE 370
>gi|330443801|ref|YP_004376787.1| ribonucleoside-diphosphate reductase subunit beta [Chlamydophila
pecorum E58]
gi|328806911|gb|AEB41084.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
pecorum E58]
Length = 346
Score = 143 bits (361), Expect = 7e-33, Method: Composition-based stats.
Identities = 68/124 (54%), Positives = 92/124 (74%), Gaps = 1/124 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFGID+IN IK ENP +W+KE Q++ ++ A LEI YA + +PKG +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWSKELQEEIIALIETAVGLEIDYAKDCLPKGILGL 283
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+ Y++ IA+RR +IGL+P++ ++NPFPWMSE +DL KEKNFFETRVTEYQ A
Sbjct: 284 KSSMFIDYVRHIADRRLERIGLKPIYN-SKNPFPWMSETMDLNKEKNFFETRVTEYQTAA 342
Query: 121 ELKW 124
L W
Sbjct: 343 SLSW 346
>gi|192291019|ref|YP_001991624.1| ribonucleotide-diphosphate reductase subunit beta [Rhodopseudomonas
palustris TIE-1]
gi|192284768|gb|ACF01149.1| Ribonucleoside-diphosphate reductase [Rhodopseudomonas palustris
TIE-1]
Length = 373
Score = 143 bits (361), Expect = 8e-33, Method: Composition-based stats.
Identities = 84/125 (67%), Positives = 96/125 (76%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIK+EN +WT FQ R M+H+A LE AY +TMP G +GL
Sbjct: 249 LRDESIHLNFGIDVINQIKLENAAVWTASFQDDIRGMIHDAAELEAAYGRDTMPHGLLGL 308
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA CE YM FIANRRC Q+GL P+F T+NPFPWMSE +DLKKEKNFFETRV EYQ G
Sbjct: 309 NAALCESYMHFIANRRCVQLGLRPVFAETDNPFPWMSETMDLKKEKNFFETRVIEYQNGG 368
Query: 121 ELKWD 125
L WD
Sbjct: 369 ALDWD 373
>gi|325110864|ref|YP_004271932.1| ribonucleotide reductase [Planctomyces brasiliensis DSM 5305]
gi|324971132|gb|ADY61910.1| ribonucleotide reductase [Planctomyces brasiliensis DSM 5305]
Length = 353
Score = 143 bits (360), Expect = 9e-33, Method: Composition-based stats.
Identities = 72/125 (57%), Positives = 91/125 (72%), Gaps = 1/125 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE+ HLNFGID+IN IK ENP +WT++FQQ+ ++ EA LEI YA + +P+G +GL
Sbjct: 230 LRDETTHLNFGIDLINGIKHENPDIWTEKFQQEIIDLVKEAVELEIDYARDCLPRGVLGL 289
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
N Y+Q IA+RR +IGL L+ + NPFPWMSE +DL KEKNFFETRVTEYQ G
Sbjct: 290 NGNLFRDYVQHIADRRLERIGLPTLYN-SSNPFPWMSETMDLAKEKNFFETRVTEYQTGG 348
Query: 121 ELKWD 125
L WD
Sbjct: 349 TLSWD 353
>gi|33242353|ref|NP_877294.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
pneumoniae TW-183]
gi|33236864|gb|AAP98951.1| ribonucleoside reductase small chain [Chlamydophila pneumoniae
TW-183]
Length = 365
Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 66/124 (53%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFGID+IN IK ENP +WT E Q++ ++ +A LEI YA + +P+G +GL
Sbjct: 243 LRDETIHLNFGIDLINGIKEENPEVWTTELQEEIVALIEKAVELEIEYAKDCLPRGILGL 302
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+ Y++ IA+RR +IGL+P++ ++ NPFPWMSE +DL KEKNFFETRVTEYQ
Sbjct: 303 RSSMFIDYVRHIADRRLERIGLKPIY-HSRNPFPWMSETMDLNKEKNFFETRVTEYQTAG 361
Query: 121 ELKW 124
L W
Sbjct: 362 NLSW 365
>gi|166154172|ref|YP_001654290.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
trachomatis 434/Bu]
gi|166155047|ref|YP_001653302.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|301335416|ref|ZP_07223660.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
trachomatis L2tet1]
gi|165930160|emb|CAP03644.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
trachomatis 434/Bu]
gi|165931035|emb|CAP06598.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
trachomatis L2b/UCH-1/proctitis]
Length = 346
Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 72/124 (58%), Positives = 92/124 (74%), Gaps = 1/124 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFGID+IN IK ENP +WT E QQ+ ++ A LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
A Y+Q IA+RR +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRVTEYQ A
Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVTEYQHAA 342
Query: 121 ELKW 124
L W
Sbjct: 343 SLTW 346
>gi|29840533|ref|NP_829639.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
caviae GPIC]
gi|29834882|gb|AAP05517.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
caviae GPIC]
Length = 346
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 67/124 (54%), Positives = 92/124 (74%), Gaps = 1/124 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFGID+IN IK ENP +W++E Q + ++ +A LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWSQELQDEIIALIQKAVDLEIEYAKDCLPRGILGL 283
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+ Y++ IA+RR +IGL+P++ Y++NPFPWMSE IDL KEKNFFETRVTEYQ
Sbjct: 284 KSSMFIDYVRHIADRRLERIGLKPIY-YSKNPFPWMSETIDLNKEKNFFETRVTEYQTSG 342
Query: 121 ELKW 124
L W
Sbjct: 343 NLSW 346
>gi|89898045|ref|YP_515155.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
felis Fe/C-56]
gi|89331417|dbj|BAE81010.1| ribonucleoside-diphosphate reductase beta chain [Chlamydophila
felis Fe/C-56]
Length = 349
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 66/124 (53%), Positives = 92/124 (74%), Gaps = 1/124 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFGID+IN IK ENP +W+++ Q + ++ +A LEI YA + +P+G +GL
Sbjct: 227 LRDETIHLNFGIDLINGIKEENPEVWSQQLQDEIVDLIQKAVDLEIEYARDCLPRGILGL 286
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+ Y++ IA+RR +IGL+P++ ++NPFPWMSE IDL KEKNFFETRVTEYQ A
Sbjct: 287 RSSMFIDYVRHIADRRLERIGLKPIYN-SKNPFPWMSETIDLNKEKNFFETRVTEYQTAA 345
Query: 121 ELKW 124
L W
Sbjct: 346 NLNW 349
>gi|15618893|ref|NP_225179.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
pneumoniae CWL029]
gi|15836516|ref|NP_301040.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
pneumoniae J138]
gi|16752043|ref|NP_445409.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
pneumoniae AR39]
gi|14195165|sp|Q9Z6S4|RIR2_CHLPN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
AltName: Full=Ribonucleotide reductase small subunit
gi|4377313|gb|AAD19122.1| Ribonucleoside Reductase, Small Chain [Chlamydophila pneumoniae
CWL029]
gi|7189783|gb|AAF38660.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
pneumoniae AR39]
gi|8979358|dbj|BAA99192.1| ribonucleoside reductase, small chain [Chlamydophila pneumoniae
J138]
gi|269302786|gb|ACZ32886.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
pneumoniae LPCoLN]
Length = 346
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 66/124 (53%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFGID+IN IK ENP +WT E Q++ ++ +A LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWTTELQEEIVALIEKAVELEIEYAKDCLPRGILGL 283
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+ Y++ IA+RR +IGL+P++ ++ NPFPWMSE +DL KEKNFFETRVTEYQ
Sbjct: 284 RSSMFIDYVRHIADRRLERIGLKPIY-HSRNPFPWMSETMDLNKEKNFFETRVTEYQTAG 342
Query: 121 ELKW 124
L W
Sbjct: 343 NLSW 346
>gi|15834835|ref|NP_296594.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
muridarum Nigg]
gi|270285001|ref|ZP_06194395.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
muridarum Nigg]
gi|270289024|ref|ZP_06195326.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
muridarum Weiss]
gi|301336399|ref|ZP_07224601.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
muridarum MopnTet14]
gi|14195147|sp|Q9PL92|RIR2_CHLMU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
AltName: Full=Ribonucleotide reductase small subunit
gi|7190253|gb|AAF39087.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydia
muridarum Nigg]
Length = 346
Score = 142 bits (357), Expect = 2e-32, Method: Composition-based stats.
Identities = 72/124 (58%), Positives = 92/124 (74%), Gaps = 1/124 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFG+D+IN IK ENP +WT E QQ+ M+ A LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGVDLINGIKEENPEIWTTELQQEIIEMIQRAVDLEIDYARDCLPRGILGL 283
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
A Y+Q IA+RR +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRVTEYQ A
Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVTEYQHAA 342
Query: 121 ELKW 124
L W
Sbjct: 343 SLTW 346
>gi|268316001|ref|YP_003289720.1| Ribonucleoside-diphosphate reductase [Rhodothermus marinus DSM
4252]
gi|262333535|gb|ACY47332.1| Ribonucleoside-diphosphate reductase [Rhodothermus marinus DSM
4252]
Length = 347
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 75/125 (60%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFGID+IN IK ENP LWT EFQ++ + ++ EA LE+AYA++ +P+G +GL
Sbjct: 223 LRDETIHLNFGIDLINGIKAENPELWTPEFQREVQQLIEEAVELEVAYAYDCLPRGVLGL 282
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
AP +Y+Q+IA+RR +IGL+ + ++NPFPWMSE IDL KEKNFFETRVTEYQQ A
Sbjct: 283 TAPMFREYVQYIADRRLERIGLKARYG-SKNPFPWMSETIDLLKEKNFFETRVTEYQQAA 341
Query: 121 ELKWD 125
L WD
Sbjct: 342 ALSWD 346
>gi|329943118|ref|ZP_08291892.1| ribonucleotide reductase, small chain family protein [Chlamydophila
psittaci Cal10]
gi|325507260|gb|ADZ18898.1| ribonucleotide reductase subunit beta [Chlamydophila psittaci 6BC]
gi|328814665|gb|EGF84655.1| ribonucleotide reductase, small chain family protein [Chlamydophila
psittaci Cal10]
gi|328914953|gb|AEB55786.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
psittaci 6BC]
Length = 346
Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 68/124 (54%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFGID+IN IK ENP +WT E Q + ++ +A LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYARDCLPRGILGL 283
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
A Y++ IA+RR +IGL+P++ +++NPFPWMSE IDL KEKNFFETRV EYQ A
Sbjct: 284 KASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFFETRVIEYQTAA 342
Query: 121 ELKW 124
L W
Sbjct: 343 NLSW 346
>gi|62185356|ref|YP_220141.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
abortus S26/3]
gi|62148423|emb|CAH64191.1| putative ibonucleoside reductase small subunit [Chlamydophila
abortus S26/3]
Length = 349
Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 68/124 (54%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFGID+IN IK ENP +WT E Q + ++ +A LEI YA + +P+G +GL
Sbjct: 227 LRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYARDCLPRGILGL 286
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
A Y++ IA+RR +IGL+P++ +++NPFPWMSE IDL KEKNFFETRV EYQ A
Sbjct: 287 KASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFFETRVIEYQTAA 345
Query: 121 ELKW 124
L W
Sbjct: 346 NLSW 349
>gi|112489977|pdb|2ANI|A Chain A, Crystal Structure Of The F127y Mutant Of Ribonucleotide
Reductase R2 From Chlamydia Trachomatis
Length = 346
Score = 140 bits (354), Expect = 4e-32, Method: Composition-based stats.
Identities = 71/124 (57%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFGID+IN IK ENP +WT E QQ+ ++ A LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
A Y+Q IA+RR +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRV EYQ A
Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVIEYQHAA 342
Query: 121 ELKW 124
L W
Sbjct: 343 SLTW 346
>gi|313848275|emb|CBY17276.1| putative ibonucleoside reductase small subunit [Chlamydophila
psittaci RD1]
Length = 349
Score = 140 bits (354), Expect = 4e-32, Method: Composition-based stats.
Identities = 68/124 (54%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFGID+IN IK ENP +WT E Q + ++ +A LEI YA + +P+G +GL
Sbjct: 227 LRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYARDCLPRGILGL 286
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
A Y++ IA+RR +IGL+P++ +++NPFPWMSE IDL KEKNFFETRV EYQ A
Sbjct: 287 KASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFFETRVIEYQTAA 345
Query: 121 ELKW 124
L W
Sbjct: 346 NLSW 349
>gi|15605563|ref|NP_220349.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
trachomatis D/UW-3/CX]
gi|255311668|ref|ZP_05354238.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
trachomatis 6276]
gi|255317969|ref|ZP_05359215.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
trachomatis 6276s]
gi|14195107|sp|O84835|RIR2_CHLTR RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
AltName: Full=Ribonucleotide reductase small subunit
gi|51247460|pdb|1SYY|A Chain A, Crystal Structure Of The R2 Subunit Of Ribonucleotide
Reductase From Chlamydia Trachomatis
gi|3329298|gb|AAC68425.1| Ribonucleoside Reductase, Small Chain [Chlamydia trachomatis
D/UW-3/CX]
gi|296436383|gb|ADH18557.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
trachomatis G/9768]
gi|296437314|gb|ADH19484.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
trachomatis G/11222]
gi|296438242|gb|ADH20403.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
trachomatis G/11074]
gi|297140743|gb|ADH97501.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
trachomatis G/9301]
gi|297748957|gb|ADI51503.1| Ribonucleoside-diphosphate reductase beta chain [Chlamydia
trachomatis D-EC]
gi|297749837|gb|ADI52515.1| Ribonucleoside-diphosphate reductase beta chain [Chlamydia
trachomatis D-LC]
Length = 346
Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats.
Identities = 71/124 (57%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFGID+IN IK ENP +WT E QQ+ ++ A LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
A Y+Q IA+RR +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRV EYQ A
Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVIEYQHAA 342
Query: 121 ELKW 124
L W
Sbjct: 343 SLTW 346
>gi|282890382|ref|ZP_06298910.1| hypothetical protein pah_c016o114 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499764|gb|EFB42055.1| hypothetical protein pah_c016o114 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 350
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 73/124 (58%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGID+IN IK ENP +WT EF+ + M+ EA LEI YA + +P G +GL
Sbjct: 228 LRDESIHLNFGIDLINTIKEENPEVWTPEFKDQIIDMVKEAVELEIQYAADCLPNGILGL 287
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA Y+ +IA+RR +IGL+P + NPFPWMSEV+DL KEKNFFETRVT+YQ GA
Sbjct: 288 NAALFRDYVGYIADRRLERIGLKPQYNTA-NPFPWMSEVMDLDKEKNFFETRVTQYQSGA 346
Query: 121 ELKW 124
L W
Sbjct: 347 ALVW 350
>gi|76789573|ref|YP_328659.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
trachomatis A/HAR-13]
gi|237803260|ref|YP_002888454.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
trachomatis B/Jali20/OT]
gi|237805181|ref|YP_002889335.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
trachomatis B/TZ1A828/OT]
gi|255349232|ref|ZP_05381239.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
trachomatis 70]
gi|255503769|ref|ZP_05382159.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
trachomatis 70s]
gi|255507450|ref|ZP_05383089.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
trachomatis D(s)2923]
gi|76168103|gb|AAX51111.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
trachomatis A/HAR-13]
gi|231273481|emb|CAX10397.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
trachomatis B/TZ1A828/OT]
gi|231274494|emb|CAX11290.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
trachomatis B/Jali20/OT]
gi|289525874|emb|CBJ15356.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
trachomatis Sweden2]
gi|296435459|gb|ADH17637.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
trachomatis E/150]
gi|296439176|gb|ADH21329.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
trachomatis E/11023]
Length = 346
Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats.
Identities = 71/124 (57%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFGID+IN IK ENP +WT E QQ+ ++ A LEI YA + +P+G +GL
Sbjct: 224 LRDETIHLNFGIDLINGIKEENPGIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGL 283
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
A Y+Q IA+RR +IGL+P++ +T+NPFPWMSE IDL KEKNFFETRV EYQ A
Sbjct: 284 RASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFFETRVIEYQHAA 342
Query: 121 ELKW 124
L W
Sbjct: 343 SLTW 346
>gi|189219089|ref|YP_001939730.1| ribonucleotide-diphosphate reductase subunit beta
[Methylacidiphilum infernorum V4]
gi|189185947|gb|ACD83132.1| Ribonucleotide reductase, beta subunit [Methylacidiphilum
infernorum V4]
Length = 361
Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats.
Identities = 68/124 (54%), Positives = 94/124 (75%), Gaps = 1/124 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFGID+IN I+ ENP +WT FQ++ M+ E+ LE AYA + +P+G +GL
Sbjct: 239 LRDETIHLNFGIDLINGIREENPEIWTAGFQKEIEEMIDESVRLEYAYARDCLPRGILGL 298
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
N+ + Y+++IA+RR +IG + + ++NPFPWMSEV+DL KEKNFFETRVTEYQ GA
Sbjct: 299 NSALFKDYVEYIADRRLERIGFKAKYG-SKNPFPWMSEVMDLVKEKNFFETRVTEYQSGA 357
Query: 121 ELKW 124
L W
Sbjct: 358 VLNW 361
>gi|297621807|ref|YP_003709944.1| ribonucleoside-diphosphate reductase beta subunit [Waddlia
chondrophila WSU 86-1044]
gi|297377108|gb|ADI38938.1| ribonucleoside-diphosphate reductase beta subunit [Waddlia
chondrophila WSU 86-1044]
Length = 344
Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats.
Identities = 69/125 (55%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFGID+IN IK ENP +W ++ + ++ +A LEIAYA E +P G +GL
Sbjct: 221 LRDETIHLNFGIDLINGIKAENPEIWNEDLTDEINGLVQQAVELEIAYAKECLPHGVLGL 280
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA +Y+Q++A+RR +IGL ++K + NPFPWMSE +DL KEKNFFETRVTEYQ A
Sbjct: 281 NAGLFVEYVQYVADRRLERIGLSAIYK-SSNPFPWMSETMDLTKEKNFFETRVTEYQSAA 339
Query: 121 ELKWD 125
L WD
Sbjct: 340 VLSWD 344
>gi|15791173|ref|NP_280997.1| ribonucleotide-diphosphate reductase subunit beta [Halobacterium
sp. NRC-1]
gi|169236929|ref|YP_001690129.1| ribonucleotide-diphosphate reductase subunit beta [Halobacterium
salinarum R1]
gi|10581791|gb|AAG20477.1| ribonucleoside reductase small chain [Halobacterium sp. NRC-1]
gi|167727995|emb|CAP14783.1| ribonucleoside-diphosphate reductase beta subunit [Halobacterium
salinarum R1]
Length = 331
Score = 137 bits (344), Expect = 6e-31, Method: Composition-based stats.
Identities = 58/125 (46%), Positives = 89/125 (71%), Gaps = 1/125 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
MRDESLHLNFG+D+INQI+ E+P +WT +F+ + +++ +A LE YA + P +G+
Sbjct: 208 MRDESLHLNFGVDLINQIRDEHPDVWTADFEAEVNSLMRDAVDLEQLYARDACPDDLLGM 267
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
++ Y++++A+RR Q+ ++P++ T+NPFPWM+E +DL E NFFE V+EYQQG
Sbjct: 268 SSEQFADYVEYVADRRFQQLRMDPVYG-TDNPFPWMTEQVDLNTETNFFERNVSEYQQGG 326
Query: 121 ELKWD 125
L WD
Sbjct: 327 SLDWD 331
>gi|284043177|ref|YP_003393517.1| ribonucleoside-diphosphate reductase [Conexibacter woesei DSM
14684]
gi|283947398|gb|ADB50142.1| Ribonucleoside-diphosphate reductase [Conexibacter woesei DSM
14684]
Length = 364
Score = 137 bits (344), Expect = 7e-31, Method: Composition-based stats.
Identities = 54/122 (44%), Positives = 81/122 (66%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES H+ ++ ++ ENP +WT EF+ + R ++ EA LE + + +P VGL
Sbjct: 235 LRDESNHIELFRRLLRELVAENPEIWTAEFRDELRELMREAVALEQRFIDDCLPVEGVGL 294
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA QY+ +IA+RR +GLEPL ENP PW++E++D++KE+NFFE RVTEYQ+ +
Sbjct: 295 NADEFAQYIDYIADRRLEGVGLEPLKPGVENPLPWLAELMDVRKEQNFFEGRVTEYQKAS 354
Query: 121 EL 122
L
Sbjct: 355 AL 356
>gi|330994651|ref|ZP_08318574.1| putative ribonucleoside-diphosphate reductase small subunit
[Gluconacetobacter sp. SXCC-1]
gi|329758292|gb|EGG74813.1| putative ribonucleoside-diphosphate reductase small subunit
[Gluconacetobacter sp. SXCC-1]
Length = 365
Score = 137 bits (344), Expect = 8e-31, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDESLH + + ENP +WT + R + + E A+ + G
Sbjct: 234 VRDESLHCDSMARLFRVFVQENPEIWTDTLRDDIRQICRDIVEHEDAFIDLSFEMGAVEG 293
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L+A ++Y++F+ANRR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY +
Sbjct: 294 LDAGQVKRYIRFVANRRLGQLGLDGIYDIATNPLPWVDEMVNAVEHANFFENRATEYSRA 353
Query: 120 A-ELKWD 125
+ WD
Sbjct: 354 STTGTWD 360
>gi|326403282|ref|YP_004283363.1| ribonucleoside-diphosphate reductase beta subunit [Acidiphilium
multivorum AIU301]
gi|325050143|dbj|BAJ80481.1| ribonucleoside-diphosphate reductase beta subunit [Acidiphilium
multivorum AIU301]
Length = 338
Score = 136 bits (343), Expect = 9e-31, Method: Composition-based stats.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDESLH N I + ENP +WT+E +++ E A+ G
Sbjct: 208 VRDESLHCNSVIKLFRTFVAENPEIWTEELRREIYLCCATIVDHEDAFIDLAFEFGAVEG 267
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A ++Y+++IA+RR Q+GL PLF +NP PW+ E+++ + NFFE R TEY +
Sbjct: 268 LTAEEVKRYIRYIADRRLLQLGLNPLFHVDKNPLPWLDEMLNAVEHTNFFENRATEYSKA 327
Query: 120 A-ELKWD 125
+ WD
Sbjct: 328 STAGSWD 334
>gi|148259750|ref|YP_001233877.1| ribonucleotide-diphosphate reductase subunit beta [Acidiphilium
cryptum JF-5]
gi|146401431|gb|ABQ29958.1| Ribonucleoside-diphosphate reductase [Acidiphilium cryptum JF-5]
Length = 338
Score = 136 bits (343), Expect = 9e-31, Method: Composition-based stats.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDESLH N I + ENP +WT+E +++ E A+ G
Sbjct: 208 VRDESLHCNSVIKLFRTFVAENPEIWTEELRREIYLCCATIVDHEDAFIDLAFEFGAVEG 267
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A ++Y+++IA+RR Q+GL PLF +NP PW+ E+++ + NFFE R TEY +
Sbjct: 268 LTAEEVKRYIRYIADRRLLQLGLNPLFHVDKNPLPWLDEMLNAVEHTNFFENRATEYSKA 327
Query: 120 A-ELKWD 125
+ WD
Sbjct: 328 STAGSWD 334
>gi|283779060|ref|YP_003369815.1| ribonucleoside-diphosphate reductase [Pirellula staleyi DSM 6068]
gi|283437513|gb|ADB15955.1| Ribonucleoside-diphosphate reductase [Pirellula staleyi DSM 6068]
Length = 357
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 69/125 (55%), Positives = 90/125 (72%), Gaps = 1/125 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFGID+IN ++ ENP +WT +FQ++ ++ EA LE+AYA + +P+G VGL
Sbjct: 234 LRDETIHLNFGIDLINGVRAENPGIWTADFQERVIKLVREAVELEVAYAWDCLPRGIVGL 293
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
N Y+Q IA+RR +IGL + NPFPWMSE +DL KEKNFFETRVTEYQ A
Sbjct: 294 NGELFRDYVQHIADRRLERIGLPTQYGSA-NPFPWMSETMDLGKEKNFFETRVTEYQSAA 352
Query: 121 ELKWD 125
L WD
Sbjct: 353 SLAWD 357
>gi|298243909|ref|ZP_06967716.1| Ribonucleoside-diphosphate reductase [Ktedonobacter racemifer DSM
44963]
gi|297556963|gb|EFH90827.1| Ribonucleoside-diphosphate reductase [Ktedonobacter racemifer DSM
44963]
Length = 361
Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats.
Identities = 72/125 (57%), Positives = 94/125 (75%), Gaps = 1/125 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFGID+IN IK ENP LWT EFQ ++ A LEIAYA++ +P G +GL
Sbjct: 238 LRDETIHLNFGIDLINGIKAENPELWTTEFQAHIYDLIKRAVELEIAYAYDCLPNGILGL 297
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA S Y+Q +A+RR +IGL P+F ++ +PFPWMSE +DL KEKNFFETRVTEYQ +
Sbjct: 298 NAESFRSYVQHVADRRLERIGLAPIF-HSSHPFPWMSETMDLSKEKNFFETRVTEYQAAS 356
Query: 121 ELKWD 125
L+W+
Sbjct: 357 TLEWE 361
>gi|159899093|ref|YP_001545340.1| ribonucleotide-diphosphate reductase subunit beta [Herpetosiphon
aurantiacus ATCC 23779]
gi|159892132|gb|ABX05212.1| Ribonucleoside-diphosphate reductase [Herpetosiphon aurantiacus
ATCC 23779]
Length = 342
Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats.
Identities = 69/125 (55%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFG+D+IN IK ENP +WT EFQ + ++ ++ LE YA E +P+G +GL
Sbjct: 219 LRDETIHLNFGVDLINGIKAENPAIWTNEFQAEIVQLIRQSVELEAQYAAECLPRGVMGL 278
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A Y+Q+IA+RR +IGL + ++NPFPWMSE IDL KEKNFFETRVTEYQ A
Sbjct: 279 HAAMFRDYVQYIADRRLQRIGLAIQYG-SQNPFPWMSETIDLTKEKNFFETRVTEYQSAA 337
Query: 121 ELKWD 125
L+WD
Sbjct: 338 SLEWD 342
>gi|149173739|ref|ZP_01852368.1| ribonucleotide-diphosphate reductase beta subunit [Planctomyces
maris DSM 8797]
gi|148847269|gb|EDL61603.1| ribonucleotide-diphosphate reductase beta subunit [Planctomyces
maris DSM 8797]
Length = 359
Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats.
Identities = 71/125 (56%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFGID+IN IK ENP LWT EFQQ + A LEI YA + +P G +GL
Sbjct: 236 LRDETIHLNFGIDLINGIKQENPDLWTPEFQQLIIDRMKYAAELEIEYAKDCLPTGILGL 295
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
N +Y+Q IA+RR +IGL + NPFPWMSE +DL KEKNFFETRVTEYQ
Sbjct: 296 NGELFREYVQHIADRRLERIGLPAQYGSA-NPFPWMSETMDLSKEKNFFETRVTEYQSSG 354
Query: 121 ELKWD 125
L WD
Sbjct: 355 SLNWD 359
>gi|300709535|ref|YP_003735349.1| ribonucleotide-diphosphate reductase subunit beta [Halalkalicoccus
jeotgali B3]
gi|299123218|gb|ADJ13557.1| ribonucleotide-diphosphate reductase subunit beta [Halalkalicoccus
jeotgali B3]
Length = 330
Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats.
Identities = 62/124 (50%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
MRDESLHLNFG+D+IN ++ EN +WT F+ + +L EA LE YA E P+ +G+
Sbjct: 208 MRDESLHLNFGVDLINTVREENSGIWTDVFEAEIEGLLREAVELERTYAREACPEEVLGM 267
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+Y++++A+RR Q+G+EP++ T+NPFPWM+E +DL KEKNFFET V EYQ G
Sbjct: 268 GPAQFAEYVEYVADRRLDQLGMEPVYD-TDNPFPWMAEQVDLNKEKNFFETNVAEYQSGG 326
Query: 121 ELKW 124
L+W
Sbjct: 327 SLEW 330
>gi|159465291|ref|XP_001690856.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
reinhardtii]
gi|158279542|gb|EDP05302.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
reinhardtii]
Length = 493
Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +K + +++ ++ EA LE + E + +G+N
Sbjct: 360 RDEGLHCDFACCLYSHLK-------NRLSRERVLQIVDEAVQLEDEFCTEALSCELLGMN 412
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G E + T NPF WM E+I L+ + NFFE RV EYQ+
Sbjct: 413 ADLMRQYIRFVADRLLVSLGYEKHYN-TRNPFDWM-EMISLQGKANFFERRVGEYQRAGV 470
Query: 122 L 122
+
Sbjct: 471 M 471
>gi|325181522|emb|CCA15972.1| ribonucleosidediphosphate reductase small chain put [Albugo
laibachii Nc14]
Length = 1611
Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 67/121 (55%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +++ + P ++ +A ++E + +++P +G+N
Sbjct: 264 RDEGLHCDFACLMYSKLVNKLPE-------ASIHAIISDAVVIEQEFVRDSLPVELIGMN 316
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R H +G+ L+ +T NPF WM +I L+ + NFFE RV EY +
Sbjct: 317 SSLMGQYIEFVADRLLHALGVSKLY-HTSNPFDWMD-MISLQGKTNFFEKRVGEYAKSGT 374
Query: 122 L 122
+
Sbjct: 375 I 375
>gi|316971821|gb|EFV55552.1| ribonucleotide reductase R2 subunit [Trichinella spiralis]
Length = 366
Score = 133 bits (335), Expect = 7e-30, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 9/123 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +K K + + R ++ EA +E + + +P +G+N
Sbjct: 241 RDEGLHCDFACLLYSHLKK-------KPTEDRVRQIITEAVSIEQEFLTDALPVRLIGMN 293
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++++A+R ++G ++ +ENPF +M E+I L+ + NFFE RV EYQ+
Sbjct: 294 CVLMSQYIEYVADRLLVELGCSKVYN-SENPFDFM-EMISLEGKTNFFEKRVGEYQKAGV 351
Query: 122 LKW 124
+
Sbjct: 352 MAD 354
>gi|269839640|ref|YP_003324332.1| ribonucleoside-diphosphate reductase [Thermobaculum terrenum ATCC
BAA-798]
gi|269791370|gb|ACZ43510.1| Ribonucleoside-diphosphate reductase [Thermobaculum terrenum ATCC
BAA-798]
Length = 353
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 69/125 (55%), Positives = 88/125 (70%), Gaps = 1/125 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFGID+IN IK ENP WT+E ++ M+ +A EIAYA E +P G +GL
Sbjct: 230 LRDETVHLNFGIDLINTIKEENPEAWTEELRRDLVGMIRQAVEYEIAYARECLPNGVLGL 289
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA +Y+Q+IA+RR +I L + + NPFPWMSE +DL KEKNFFETRVTEYQ
Sbjct: 290 NADLFREYVQYIADRRLERIELPVQY-RSRNPFPWMSETMDLPKEKNFFETRVTEYQNAG 348
Query: 121 ELKWD 125
L WD
Sbjct: 349 TLVWD 353
>gi|219126374|ref|XP_002183434.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405190|gb|EEC45134.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 296
Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 9/124 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + ++++ + P + ++ +A +E + + +P +G+N
Sbjct: 172 RDEGLHCDFACLLYSKLQNQLP-------VARIVEIITDAVTIEQEFVQDALPVELIGMN 224
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +Y++F A+R +G +K NPF WM E+I L+ + NFFE RV EY +
Sbjct: 225 STLMCRYIEFCADRLLVALGCPKHYKAV-NPFDWM-EMISLQGKTNFFEKRVGEYAKSGV 282
Query: 122 LKWD 125
+ D
Sbjct: 283 GEKD 286
>gi|52077136|dbj|BAD46182.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
gi|52077275|dbj|BAD46317.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
gi|186920364|gb|ACC95435.1| ribonucleotide diphosphate reductase small subunit 1 [Oryza sativa
Japonica Group]
Length = 339
Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + + R ++ +A +E + + +P VG+N
Sbjct: 209 RDEGLHCDFACLLYDLLRGKLDE-------ARVREIVADAVDIEREFVCDALPVALVGMN 261
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G + ++ NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 262 GDLMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 319
Query: 122 LK 123
+
Sbjct: 320 MS 321
>gi|313117005|ref|YP_004038129.1| ribonucleotide reductase, beta subunit [Halogeometricum borinquense
DSM 11551]
gi|312294957|gb|ADQ68993.1| ribonucleotide reductase, beta subunit [Halogeometricum borinquense
DSM 11551]
Length = 330
Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats.
Identities = 63/124 (50%), Positives = 85/124 (68%), Gaps = 1/124 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
MRDESLH+ FG+D+INQI+ ENP WT EF + R ++ +A LE YA E P +G+
Sbjct: 208 MRDESLHVGFGVDLINQIRAENPDAWTDEFGAEVRDLIEKAVDLEQIYAREACPDDVLGM 267
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+ +Y++ +A+RR Q+ L+ + T+NPFPWMSE +DL KEKNFFET+VTEYQ G
Sbjct: 268 SPDQFAEYVEHVADRRLGQLDLDASYG-TDNPFPWMSEAVDLNKEKNFFETQVTEYQSGG 326
Query: 121 ELKW 124
L W
Sbjct: 327 SLDW 330
>gi|125554800|gb|EAZ00406.1| hypothetical protein OsI_22421 [Oryza sativa Indica Group]
Length = 244
Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + + R ++ +A +E + + +P VG+N
Sbjct: 114 RDEGLHCDFACLLYDLLRGKLDE-------ARVREIVADAVDIEREFVCDALPVALVGMN 166
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G + ++ NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 167 GDLMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 224
Query: 122 LK 123
+
Sbjct: 225 MS 226
>gi|329113329|ref|ZP_08242110.1| Ribonucleoside-diphosphate reductase subunit beta [Acetobacter
pomorum DM001]
gi|326697154|gb|EGE48814.1| Ribonucleoside-diphosphate reductase subunit beta [Acetobacter
pomorum DM001]
Length = 339
Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH I + ENP LWT++ + + + E A+ G
Sbjct: 204 VRDETLHCLSIIRLFRVFIQENPELWTEQLRTELTDICRTIVEHEEAFIDLAFEMGAVEG 263
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
LNA + Y+ FIA+RR Q+GLEP++ T NP PW+ ++++ + NFFE R TEY +
Sbjct: 264 LNAEQVKTYIHFIADRRLTQLGLEPIYNTTTNPLPWLDDMLNAVEHTNFFENRSTEYSRA 323
Query: 120 A-ELKWD 125
+ W+
Sbjct: 324 STAGTWE 330
>gi|218197485|gb|EEC79912.1| hypothetical protein OsI_21460 [Oryza sativa Indica Group]
Length = 345
Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + + + ++ +A +E + + +P VG+N
Sbjct: 215 RDEGLHCDFACLLYDLLRGKLDE-------SRVQEIVADAVDIEREFVCDALPVALVGMN 267
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G + ++ NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 268 GELMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 325
Query: 122 LK 123
+
Sbjct: 326 MS 327
>gi|212723480|ref|NP_001131892.1| hypothetical protein LOC100193273 [Zea mays]
gi|194692834|gb|ACF80501.1| unknown [Zea mays]
gi|195624040|gb|ACG33850.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
Length = 339
Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + + RT++ +A +E + + +P VG+N
Sbjct: 209 RDEGLHCDFACLLYDVLRSKLDE-------ARVRTIVADAVDIEREFVCDALPVSLVGMN 261
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G + ++ T NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 262 GDLMSQYIEFVADRLLMALGCKKMYNVT-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 319
Query: 122 LK 123
+
Sbjct: 320 MN 321
>gi|115466138|ref|NP_001056668.1| Os06g0127900 [Oryza sativa Japonica Group]
gi|55296211|dbj|BAD67929.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
gi|113594708|dbj|BAF18582.1| Os06g0127900 [Oryza sativa Japonica Group]
gi|186920368|gb|ACC95437.1| ribonucleotide diphosphate reductase small subunit 2 [Oryza sativa
Japonica Group]
gi|215706414|dbj|BAG93270.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222634884|gb|EEE65016.1| hypothetical protein OsJ_19968 [Oryza sativa Japonica Group]
Length = 345
Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + + + ++ +A +E + + +P VG+N
Sbjct: 215 RDEGLHCDFACLLYDLLRGKLDE-------SRVQEIVADAVDIEREFVCDALPVALVGMN 267
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G + ++ NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 268 GELMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 325
Query: 122 LK 123
+
Sbjct: 326 MS 327
>gi|322368525|ref|ZP_08043093.1| ribonucleotide-diphosphate reductase subunit beta [Haladaptatus
paucihalophilus DX253]
gi|320551809|gb|EFW93455.1| ribonucleotide-diphosphate reductase subunit beta [Haladaptatus
paucihalophilus DX253]
Length = 330
Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats.
Identities = 62/124 (50%), Positives = 85/124 (68%), Gaps = 1/124 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH+ FG+D+IN+I+ ENP+ WT F + ++ A LE YA+E P +G+
Sbjct: 208 LRDESLHVGFGVDLINEIRAENPNAWTDAFGDEVTDLITNAVELEKIYAYEACPDEILGM 267
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A +Y++ IA+RR Q+ L+ + TENPFPWMSE +DL KEKNFFET+VTEYQ G
Sbjct: 268 SAAQFAEYVEHIADRRLAQLDLDEQYG-TENPFPWMSEQVDLNKEKNFFETQVTEYQSGG 326
Query: 121 ELKW 124
L W
Sbjct: 327 SLDW 330
>gi|325119319|emb|CBZ54873.1| hypothetical protein NCLIV_052980 [Neospora caninum Liverpool]
Length = 392
Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 9/123 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +Q+K + P + + M+ EA +E A+ E +P +G+N
Sbjct: 267 RDEGLHADFACLLYSQLKNKLPD-------KVVQDMVREAVTVERAFICEALPVDLIGMN 319
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S QY++F+A+R +G+ +F + NPF WM E+I L+ + NFFE RV EYQ+
Sbjct: 320 NRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFFEKRVGEYQKAGV 377
Query: 122 LKW 124
+
Sbjct: 378 MAD 380
>gi|209966751|ref|YP_002299666.1| ribonucleotide-diphosphate reductase subunit beta [Rhodospirillum
centenum SW]
gi|209960217|gb|ACJ00854.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodospirillum
centenum SW]
Length = 322
Score = 130 bits (327), Expect = 6e-29, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH I + ENP +WT+ FQ++ E A+ G
Sbjct: 191 VRDETLHTLSMIKLFRTFVNENPQVWTEAFQRELTVCCETIVHHEDAFIDLAFEMGPVEG 250
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ A ++Y+++IA+RR Q+GLEP+++ +NP PWM +++ + NFFE R TEY +
Sbjct: 251 MTAEDVKRYIRWIADRRLGQLGLEPVYRIEKNPLPWMDAILNGIEHTNFFENRATEYSKA 310
Query: 120 AE-LKWD 125
A WD
Sbjct: 311 ATRGTWD 317
>gi|88861512|ref|ZP_01136127.1| ribonucleotide-diphosphate reductase beta subunit
[Pseudoalteromonas tunicata D2]
gi|88816487|gb|EAR26327.1| ribonucleotide-diphosphate reductase beta subunit
[Pseudoalteromonas tunicata D2]
Length = 219
Score = 130 bits (327), Expect = 6e-29, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH N I + + ENP +WT +++ E A+ G
Sbjct: 89 VRDETLHCNSMIRIFKEFIKENPEIWTPTLKKELYEACRIIVEHEDAFIDLAFEMGPMEG 148
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A + Y++FIANRR Q+GLEP++ +NP W+ +++ + NFFE R TEY +
Sbjct: 149 LTAQEVKDYIRFIANRRLIQLGLEPIYDVQKNPLTWLDTMLNAVEHMNFFEGRATEYSKA 208
Query: 120 A-ELKW 124
+ + W
Sbjct: 209 STQGTW 214
>gi|242095388|ref|XP_002438184.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
gi|241916407|gb|EER89551.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
Length = 339
Score = 130 bits (327), Expect = 6e-29, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + ++ + + R ++ +A +E + + +P VG+N
Sbjct: 209 RDEGLHCDFACLLYELLRSKLDE-------ARVREIVADAVDIEREFVCDALPVALVGMN 261
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G + ++ NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 262 GGLMSQYIEFVADRLLMALGCKKMYN-ATNPFDWM-ELISLQGKTNFFEKRVGDYQKASV 319
Query: 122 LK 123
+
Sbjct: 320 MN 321
>gi|221480670|gb|EEE19110.1| ribonucleotide-diphosphate reductase, small subunit, putative
[Toxoplasma gondii GT1]
Length = 391
Score = 130 bits (326), Expect = 7e-29, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 9/123 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +Q+K + P + + M+ EA +E A+ E +P +G+N
Sbjct: 266 RDEGLHADFACLLYSQLKHKLPD-------KVVQDMVREAVTVERAFICEALPVDLIGMN 318
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S QY++F+A+R +G+ +F + NPF WM E+I L+ + NFFE RV EYQ+
Sbjct: 319 NRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFFEKRVGEYQKAGV 376
Query: 122 LKW 124
+
Sbjct: 377 MAD 379
>gi|258542157|ref|YP_003187590.1| ribonucleotide-diphosphate reductase subunit beta [Acetobacter
pasteurianus IFO 3283-01]
gi|256633235|dbj|BAH99210.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|256636294|dbj|BAI02263.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
pasteurianus IFO 3283-03]
gi|256639347|dbj|BAI05309.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
pasteurianus IFO 3283-07]
gi|256642403|dbj|BAI08358.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
pasteurianus IFO 3283-22]
gi|256645458|dbj|BAI11406.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
pasteurianus IFO 3283-26]
gi|256648511|dbj|BAI14452.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
pasteurianus IFO 3283-32]
gi|256651564|dbj|BAI17498.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256654555|dbj|BAI20482.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
pasteurianus IFO 3283-12]
Length = 339
Score = 130 bits (326), Expect = 8e-29, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH I + ENP LWT++ + + + E A+ G
Sbjct: 204 VRDETLHCLSIIRLFRVFIQENPELWTEQLRTELTDICRTIVEHEEAFIDLAFEMGAVEG 263
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
LNA + Y+ FIA+RR Q+GLEP++ T NP PW+ ++++ + NFFE R TEY +
Sbjct: 264 LNAEQVKTYIHFIADRRLTQLGLEPIYNTTTNPLPWLDDMLNAVEHTNFFENRATEYSRA 323
Query: 120 AE-LKWD 125
+ W+
Sbjct: 324 STSGTWE 330
>gi|237845387|ref|XP_002371991.1| ribonucleotide-diphosphate reductase, small subunit, putative
[Toxoplasma gondii ME49]
gi|211969655|gb|EEB04851.1| ribonucleotide-diphosphate reductase, small subunit, putative
[Toxoplasma gondii ME49]
gi|221501644|gb|EEE27410.1| ribonucleotide-diphosphate reductase, small subunit, putative
[Toxoplasma gondii VEG]
Length = 391
Score = 130 bits (326), Expect = 8e-29, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 9/123 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +Q+K + P + + M+ EA +E A+ E +P +G+N
Sbjct: 266 RDEGLHADFACLLYSQLKHKLPD-------KVVQDMVREAVTVERAFICEALPVDLIGMN 318
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S QY++F+A+R +G+ +F + NPF WM E+I L+ + NFFE RV EYQ+
Sbjct: 319 NRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFFEKRVGEYQKAGV 376
Query: 122 LKW 124
+
Sbjct: 377 MAD 379
>gi|254455551|ref|ZP_05068980.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
Pelagibacter sp. HTCC7211]
gi|207082553|gb|EDZ59979.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
Pelagibacter sp. HTCC7211]
Length = 335
Score = 130 bits (326), Expect = 8e-29, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH N I + + ENP +WT + +++ E A+ G
Sbjct: 205 VRDETLHCNSMIRIFKEFINENPEIWTPKLKKELYEACRTIIAHEDAFIDLAFEMGPMEG 264
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A + Y++FI NRR Q+GLEP++ +NP W+ +++ + NFFE R TEY +
Sbjct: 265 LTAQEVKDYIRFIGNRRLTQLGLEPIYDVDKNPLGWLDTMLNAVEHMNFFEGRATEYSKA 324
Query: 120 A-ELKW 124
+ + W
Sbjct: 325 STQGTW 330
>gi|294055010|ref|YP_003548668.1| Ribonucleoside-diphosphate reductase [Coraliomargarita akajimensis
DSM 45221]
gi|293614343|gb|ADE54498.1| Ribonucleoside-diphosphate reductase [Coraliomargarita akajimensis
DSM 45221]
Length = 360
Score = 130 bits (326), Expect = 8e-29, Method: Composition-based stats.
Identities = 53/122 (43%), Positives = 81/122 (66%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES H+ ++I + EN +WT EF+++ R ++ EA LE + + +P VGL
Sbjct: 231 LRDESNHIEVFRNLIMDLIEENEDVWTPEFREELRDLMREAVTLEKDFIRDCLPVNSVGL 290
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A QY+ +IA+RR +GL PL +NPFPW++E++D+KKE+NFFE RVTEYQ+ +
Sbjct: 291 SADEFCQYIDYIADRRLEGVGLAPLSPGVDNPFPWLAEMMDIKKEQNFFEGRVTEYQKAS 350
Query: 121 EL 122
L
Sbjct: 351 AL 352
>gi|257053403|ref|YP_003131236.1| ribonucleotide-diphosphate reductase subunit beta [Halorhabdus
utahensis DSM 12940]
gi|256692166|gb|ACV12503.1| Ribonucleoside-diphosphate reductase [Halorhabdus utahensis DSM
12940]
Length = 330
Score = 130 bits (326), Expect = 9e-29, Method: Composition-based stats.
Identities = 64/124 (51%), Positives = 86/124 (69%), Gaps = 1/124 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
MRDESLH+ FG+D+I+QI+ ENP +WT EF + ++ EA LE YA E P+ +G+
Sbjct: 208 MRDESLHVGFGVDLIDQIRTENPGVWTDEFDSEVIDLIKEAVELEQIYAREACPEEILGM 267
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+ Y+++IA+RR Q+ L + TENPFPWMSE +DL KEKNFFET+VTEYQ G
Sbjct: 268 SGSQFADYVEYIADRRLDQLDLPEQYG-TENPFPWMSEQVDLNKEKNFFETQVTEYQSGG 326
Query: 121 ELKW 124
L+W
Sbjct: 327 SLEW 330
>gi|226528734|ref|NP_001150842.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
gi|195642302|gb|ACG40619.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
Length = 339
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + ++ + + R ++ +A +E + + +P VG+N
Sbjct: 209 RDEGLHCDFACLLYELLRNKLDE-------ARVREIVADAVDIEREFVCDALPVALVGMN 261
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G + ++ T NPF WM E+I L + NFFE RV +YQ+ +
Sbjct: 262 GDLMSQYIEFVADRLLMALGCKKMYNVT-NPFDWM-ELISLMGKTNFFEKRVGDYQKASV 319
Query: 122 LK 123
+
Sbjct: 320 MN 321
>gi|1710401|sp|P49730|RIR2_TOBAC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleoside-diphosphate reductase R2
subunit; AltName: Full=Ribonucleotide reductase small
subunit
gi|1044912|emb|CAA63194.1| ribonucleotide reductase R2 [Nicotiana tabacum]
Length = 329
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ TK +++ + ++ +A +E + + +P VG+N
Sbjct: 200 RDEGLHCDFACLLYSLLR-------TKLTEERVKGIVADAVEIEREFVCDALPCALVGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+Y++F+A+R +G + L+ +NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 253 GDLMSKYIEFVADRLLDALGYDKLYN-AQNPFDWM-ELISLQGKTNFFEKRVGEYQKASV 310
Query: 122 LK 123
+
Sbjct: 311 MS 312
>gi|157825769|ref|YP_001493489.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia akari
str. Hartford]
gi|157799727|gb|ABV74981.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia akari
str. Hartford]
Length = 327
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
+RDE+LH N I + ENP +WT+ +++ E A+ G G
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 248
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY +
Sbjct: 249 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATEYSKA 308
Query: 120 A-ELKWD 125
A W+
Sbjct: 309 ATTGSWE 315
>gi|298707394|emb|CBJ30029.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 380
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + ++ + P ++ ++ +A +E + +P +G+N
Sbjct: 255 RDEGLHTDFACLLFRKLVNKLP-------VERVAEIICDAVDIEKEFITSALPVELIGMN 307
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F A+R ++G E + + NPF WM E+I L+ + NFFE RV EY +
Sbjct: 308 SALMRQYIEFCADRLLMELGCEKKYN-STNPFDWM-EMISLQGKTNFFEKRVGEYSKSGV 365
Query: 122 LKW 124
Sbjct: 366 GVD 368
>gi|71083845|ref|YP_266565.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
Pelagibacter ubique HTCC1062]
gi|71062958|gb|AAZ21961.1| ribonucleoside-diphosphate reductase beta chain [Candidatus
Pelagibacter ubique HTCC1062]
Length = 337
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH N I + + ENP +WT E + + E A+ G
Sbjct: 207 VRDETLHCNSMIRLFKEFIHENPEIWTPELKAELYKACRTIIEHEDAFIDLAFEMGPMQG 266
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A + Y++FIANRR Q+GLEP++ +NP W+ +++ + NFFE R TEY +
Sbjct: 267 LTAQDVKLYIRFIANRRLSQLGLEPIYDVDKNPLTWLDSMLNAVEHMNFFEGRSTEYSKA 326
Query: 120 A-ELKW 124
A + W
Sbjct: 327 ATQGTW 332
>gi|58584525|ref|YP_198098.1| ribonucleotide-diphosphate reductase subunit beta [Wolbachia
endosymbiont strain TRS of Brugia malayi]
gi|58418841|gb|AAW70856.1| Ribonucleotide reductase, beta subunit [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 331
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
RDE+LH N I++ N EN +W EF++ + LE + GL
Sbjct: 193 RDETLHTNSIINLFNTFIKENNEIWNDEFKEGLYSACRTIVGLEDEFIKLAFDLGDVEGL 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A Y+++IANRR Q+GL+P++ +NP PW+ E+++ + NFFE RVTEY + A
Sbjct: 253 SAEEVRNYIRYIANRRLMQLGLKPIYDINDNPLPWLDEILNGVEHTNFFENRVTEYSRAA 312
Query: 121 -ELKWD 125
+ W+
Sbjct: 313 TQGTWE 318
>gi|190570498|ref|YP_001974856.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|213019257|ref|ZP_03335064.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
gi|190356770|emb|CAQ54129.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|212995366|gb|EEB56007.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
Length = 329
Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
RDE+LH N I++ N EN +W EF+++ + LE + GL
Sbjct: 193 RDETLHTNSIINLFNTFIKENNEIWNDEFKEELYSACRTIVELEDEFISLAFDLGDVEGL 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A Y+++IANRR Q+GL+ ++ +NP PW+ E+++ + NFFE RVTEY + A
Sbjct: 253 SAEEVRNYIRYIANRRLTQLGLKSIYNVKDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 312
Query: 121 -ELKWD 125
+ W+
Sbjct: 313 TQGTWE 318
>gi|91763118|ref|ZP_01265082.1| ribonucleotide-diphosphate reductase beta subunit [Candidatus
Pelagibacter ubique HTCC1002]
gi|91717531|gb|EAS84182.1| ribonucleotide-diphosphate reductase beta subunit [Candidatus
Pelagibacter ubique HTCC1002]
Length = 342
Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH N I + + ENP +WT E + + E A+ G
Sbjct: 212 VRDETLHCNSMIRLFKEFIHENPEIWTPELKAELYKACRTIIEHEDAFIDLAFEMGPMQG 271
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A + Y++FIANRR Q+GLEP++ +NP W+ +++ + NFFE R TEY +
Sbjct: 272 LTAQDVKLYIRFIANRRLSQLGLEPIYDVDKNPLTWLDSMLNAVEHMNFFEGRSTEYSKA 331
Query: 120 A-ELKW 124
A + W
Sbjct: 332 ATQGTW 337
>gi|242076364|ref|XP_002448118.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
gi|241939301|gb|EES12446.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
Length = 339
Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + + R ++ +A +E + + +P VG+N
Sbjct: 209 RDEGLHCDFACLLYDLLRGKLDE-------SRVREIVADAVDIEREFVCDALPVALVGMN 261
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G + ++ NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 262 GALMSQYIEFVADRLLMALGHKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 319
Query: 122 LK 123
+
Sbjct: 320 MS 321
>gi|289582310|ref|YP_003480776.1| ribonucleoside-diphosphate reductase [Natrialba magadii ATCC 43099]
gi|289531863|gb|ADD06214.1| Ribonucleoside-diphosphate reductase [Natrialba magadii ATCC 43099]
Length = 330
Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats.
Identities = 62/124 (50%), Positives = 86/124 (69%), Gaps = 1/124 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
MRDESLH+ FG+D+I+QI++ENP +WT F + ++ EA LE YA+E P +G+
Sbjct: 208 MRDESLHVGFGVDLIDQIRMENPDVWTDAFGDEVVELITEAVELEKIYAYEACPDEILGM 267
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A +Y++ IA+RR Q+ L + T+NPFPW+SE +DL KEKNFFET+VTEYQ G
Sbjct: 268 SADQFAEYVEHIADRRLGQLDLPTQYG-TDNPFPWLSEQVDLNKEKNFFETQVTEYQSGG 326
Query: 121 ELKW 124
L W
Sbjct: 327 SLDW 330
>gi|296536499|ref|ZP_06898590.1| ribonucleotide-diphosphate reductase subunit beta [Roseomonas
cervicalis ATCC 49957]
gi|296263178|gb|EFH09712.1| ribonucleotide-diphosphate reductase subunit beta [Roseomonas
cervicalis ATCC 49957]
Length = 343
Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDE+LH I + ENP +WT++ + + E A+ G G
Sbjct: 198 VRDETLHCLSVIRLFRTFIQENPEIWTEQLKADLVEICTTIVEHEDAFIDLAFELGGVQG 257
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ +QY++FIA+RR Q+GLEP + +NP PW+ E+++ + NFFE R TEY +
Sbjct: 258 MEPEDVKQYIRFIADRRLQQLGLEPHYGTEKNPLPWLDEILNAVEHMNFFEGRATEYSKA 317
Query: 120 A-ELKWD 125
+ W+
Sbjct: 318 STAGTWE 324
>gi|239947951|ref|ZP_04699704.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsia
endosymbiont of Ixodes scapularis]
gi|239922227|gb|EER22251.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsia
endosymbiont of Ixodes scapularis]
Length = 327
Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
+RDE+LH N I + IENP +WT+ +++ E A+ G G
Sbjct: 189 VRDETLHTNSIITLFKTFVIENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 248
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY +
Sbjct: 249 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATEYSKA 308
Query: 120 A-ELKWD 125
A W+
Sbjct: 309 ATTGSWE 315
>gi|298713498|emb|CBJ27053.1| Ribonucleoside-diphosphate reductase small chain [Ectocarpus
siliculosus]
Length = 504
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 9/118 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + L K ++ ++ EA +E ++ +P +G+N
Sbjct: 374 RDEGLHCDFACQLF-------ASLENKPSRETVMAIVREAVEVEKSFICGALPCSLIGMN 426
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
A QY++F+A+R +G + T+NPF WM +I L+ + NFFE RV EYQ+
Sbjct: 427 AGVMSQYIEFVADRLLGSLGYGKSYG-TQNPFDWMD-LISLQGKTNFFEKRVGEYQKA 482
>gi|157964544|ref|YP_001499368.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
massiliae MTU5]
gi|157844320|gb|ABV84821.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia
massiliae MTU5]
Length = 336
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
+RDE+LH N I + ENP +WT+ +++ E A+ G G
Sbjct: 190 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 249
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY +
Sbjct: 250 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATEYSKA 309
Query: 120 A-ELKWD 125
A W+
Sbjct: 310 ATTGSWE 316
>gi|224055741|ref|XP_002298630.1| predicted protein [Populus trichocarpa]
gi|222845888|gb|EEE83435.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ EA +E + +++P VG+N
Sbjct: 200 RDEGLHCDFACLLYSLLRKKLSE-------ERVKGIVKEAVDIEREFVVDSLPCALVGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 253 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 310
Query: 122 LK 123
+
Sbjct: 311 MS 312
>gi|67459102|ref|YP_246726.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia felis
URRWXCal2]
gi|67004635|gb|AAY61561.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia felis
URRWXCal2]
Length = 327
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
+RDE+LH N I + ENP +WT+ +++ E A+ G G
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 248
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY +
Sbjct: 249 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATEYSKA 308
Query: 120 A-ELKWD 125
A W+
Sbjct: 309 ATTGSWE 315
>gi|162147608|ref|YP_001602069.1| ribonucleotide-diphosphate reductase subunit beta
[Gluconacetobacter diazotrophicus PAl 5]
gi|209542240|ref|YP_002274469.1| ribonucleotide-diphosphate reductase subunit beta
[Gluconacetobacter diazotrophicus PAl 5]
gi|161786185|emb|CAP55767.1| putative ribonucleotide reductase small subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|209529917|gb|ACI49854.1| Ribonucleoside-diphosphate reductase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 353
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH + ENP +WT + + + E A+ G
Sbjct: 213 VRDETLHCLSMARLFRVFIQENPEIWTDALRADIVQICRDIVEHEDAFIDLCFEMGPVEG 272
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L+ + Y++FIA+RR + +GL+ ++ NP PW+ ++++ + NFFE R TEY +
Sbjct: 273 LDGDLVKTYIRFIADRRLNLLGLDGIYDVPSNPLPWVDDMLNAVEHTNFFENRSTEYSRA 332
Query: 120 A-ELKWD 125
+ W+
Sbjct: 333 STTGSWE 339
>gi|291336894|gb|ADD96423.1| hypothetical protein [uncultured organism MedDCM-OCT-S09-C426]
Length = 147
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 58/125 (46%), Positives = 83/125 (66%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH+NFG +IN +K + P +WTK+F++++ + +A LEI YAH+ +P+G +GL
Sbjct: 22 LRDESLHINFGTYLINTLKEQYPTIWTKKFEEETIEHIKKAVQLEINYAHDVLPRGILGL 81
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA YM +I NRR IGL+ F+ NPFPW+SEV+D NFFE +V +YQ
Sbjct: 82 NADMFVDYMHYIGNRRLEGIGLDYRFESDTNPFPWLSEVVDTGAMTNFFERKVKDYQNSG 141
Query: 121 ELKWD 125
L+ D
Sbjct: 142 VLEDD 146
>gi|225684487|gb|EEH22771.1| ribonucleoside-diphosphate reductase small chain A
[Paracoccidioides brasiliensis Pb03]
Length = 413
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + + + ++ EA +E + + +P +G+N
Sbjct: 274 RDEGLHTDFACLLFSHLR-------HRPSPEAVQKIITEAVAIEQEFLTDALPCALLGMN 326
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + ++ + NPF +M I L + NFFE RV +YQ+
Sbjct: 327 AKLMCQYIEFVADRLLVALGNKKVYN-STNPFDFMDN-ISLTGKTNFFEKRVGDYQKAGV 384
Query: 122 L 122
+
Sbjct: 385 M 385
>gi|929959|gb|AAA74020.1| ribonuleotide reductase small subunit [Urechis caupo]
Length = 399
Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +K K Q++ ++ +A +E ++ E +P +G+N
Sbjct: 271 RDEGLHCDFACLMFSHLK-------NKPSQERVYDIIRDAVRIEQSFLTEALPVNLIGMN 323
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G ++ ENPF +M I L+ + NFFE RV EYQ+
Sbjct: 324 CKLMAQYIEFVADRLLLELGCPKIWNV-ENPFDFMDN-ISLEGKTNFFEKRVGEYQKMGV 381
Query: 122 LK 123
+
Sbjct: 382 MS 383
>gi|224129040|ref|XP_002328875.1| predicted protein [Populus trichocarpa]
gi|222839305|gb|EEE77642.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 200 RDEGLHCDFACLLYSLLRKKLSE-------EQVKGIVKDAVDIEREFVVDALPCALVGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 253 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 310
Query: 122 LK 123
+
Sbjct: 311 MS 312
>gi|189501948|ref|YP_001957665.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497389|gb|ACE05936.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
5a2]
Length = 355
Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 67/122 (54%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +++ R ++ +A +E + + +P +G+N
Sbjct: 226 RDEGLHCDFACLLY------ANHLQNKLPEERVREIITDAVAIEKEFVTDALPVKLIGMN 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R ++G ++ NPF +M E+I L+ + NFFE RV EYQ+
Sbjct: 280 ADLMSQYIEFVADRLLLELGCSKVYN-ATNPFDFM-EMISLQGKTNFFEKRVGEYQKAGV 337
Query: 122 LK 123
+K
Sbjct: 338 MK 339
>gi|256081213|ref|XP_002576867.1| ribonucleoside-diphosphate reductase small chain [Schistosoma
mansoni]
gi|238662153|emb|CAZ33104.1| ribonucleoside-diphosphate reductase small chain, putative
[Schistosoma mansoni]
Length = 365
Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + I + P ++ +++ EA L+E + E +P +G+N
Sbjct: 237 RDEGLHCDFACLLFKHIIKKPPK-------ERVESIIREAVLIEQEFLSEALPVSLIGMN 289
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++FIA+R ++G E ++ +++NPF +M E I ++ + NFFE RV EYQ+
Sbjct: 290 CKLMCQYIEFIADRLLVELGYEKMY-HSDNPFDFM-ENISIEGKTNFFEKRVGEYQRAGV 347
Query: 122 LK 123
+
Sbjct: 348 MS 349
>gi|301097698|ref|XP_002897943.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
infestans T30-4]
gi|262106388|gb|EEY64440.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
infestans T30-4]
Length = 360
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + +++ + P + ++ +A +E + +++P +G+N
Sbjct: 235 RDEGMHTDFACLMYSKLVNKLPE-------SRVHEIIRDAVAIEHEFVCDSLPVELIGMN 287
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R + +G+ ++ +NPF WM +I L+ + NFFE RV EY +
Sbjct: 288 SALMCQYIEFVADRLLYSLGVSKIYNV-KNPFDWMD-MISLQGKTNFFEKRVGEYSKAGV 345
Query: 122 L 122
Sbjct: 346 G 346
>gi|156545974|ref|XP_001606963.1| PREDICTED: similar to ENSANGP00000013211 [Nasonia vitripennis]
Length = 388
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + H+ K +++ +++ +A +E + + +P +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HIVQKPSEERVISIIKDAVTIEQEFLTDALPVEMIGMN 313
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G ++ +ENPF +M I L+ + NFFE +V EYQ+
Sbjct: 314 CRLMCQYIEFVADRLLGELGCPKVYN-SENPFDFMEH-ISLEGKTNFFEKKVGEYQKWGV 371
Query: 122 LKW 124
++
Sbjct: 372 MQD 374
>gi|254442775|ref|ZP_05056251.1| ribonucleoside-diphosphate reductase, beta subunit
[Verrucomicrobiae bacterium DG1235]
gi|198257083|gb|EDY81391.1| ribonucleoside-diphosphate reductase, beta subunit
[Verrucomicrobiae bacterium DG1235]
Length = 361
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 76/123 (61%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES H+ ++ + ENP +WT EF+ + R + EA LE + + +P +GL
Sbjct: 232 LRDESNHIELLRNLFMDLIEENPDVWTPEFKAELRDAMSEAIALEKEFIADCLPVDSIGL 291
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
QY+ +IA+RR GL+PL NP PW++E++D+KKE+NFFE RVTEYQ+ +
Sbjct: 292 RKEDFVQYIDYIADRRLEGCGLDPLTPGVTNPLPWLAEMMDIKKEQNFFEGRVTEYQKAS 351
Query: 121 ELK 123
L+
Sbjct: 352 SLE 354
>gi|241166485|ref|XP_002409876.1| ribonucleotide reductase, beta subunit, putative [Ixodes
scapularis]
gi|215494664|gb|EEC04305.1| ribonucleotide reductase, beta subunit, putative [Ixodes
scapularis]
Length = 376
Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL K Q + R ++ +A ++E + + +P +G+N
Sbjct: 251 RDEGLHTDFACLMFS-------HLVNKPSQARVRQIICDAVVIEQEFLTDALPVALIGMN 303
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
++Y++F+A+R ++G E ++ +ENPF +M I L+ + NFFE RV EYQ+
Sbjct: 304 CELMKRYIEFVADRLLVELGCEKVYN-SENPFDFMEH-ISLEGKTNFFEKRVGEYQKAGV 361
Query: 122 L 122
+
Sbjct: 362 M 362
>gi|323450429|gb|EGB06310.1| hypothetical protein AURANDRAFT_65685 [Aureococcus anophagefferens]
Length = 349
Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + ++++ + P + ++ +A +E + +P +G+N
Sbjct: 224 RDEGMHCDFACLLYSKLRNKLP-------VETINALIGDAVTIEKEFVVSALPVELIGMN 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ + QY++F A+R +G L++ NPF WM E+I L+ + NFFE RV EY +
Sbjct: 277 SRTMCQYIEFCADRLLLALGCPKLYE-ATNPFDWM-ELISLQGKTNFFEKRVGEYAKSGV 334
Query: 122 L 122
Sbjct: 335 G 335
>gi|31322342|gb|AAP15464.1| ribonucleotide reductase small subunit [Rickettsia rickettsii str.
'Sheila Smith']
Length = 336
Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
+RDE+LH N I + ENP +WT+ +++ E A+ G G
Sbjct: 197 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 256
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY +
Sbjct: 257 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRTTEYSKA 316
Query: 120 A-ELKWD 125
A W+
Sbjct: 317 ATTGSWE 323
>gi|291220709|ref|XP_002730368.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
[Saccoglossus kowalevskii]
Length = 402
Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL K QQ+ ++ +A +E + + +P +G+N
Sbjct: 277 RDEGLHCDFACLMFS-------HLTNKPSQQRIIEIIRDAVKIEQEFLTDALPVSLIGMN 329
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R +G ++ ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 330 KDLMKQYIEFVADRLLLDLGCNKIYN-KENPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 387
Query: 122 LK 123
+
Sbjct: 388 MS 389
>gi|296116311|ref|ZP_06834927.1| ribonucleotide-diphosphate reductase subunit beta
[Gluconacetobacter hansenii ATCC 23769]
gi|295977130|gb|EFG83892.1| ribonucleotide-diphosphate reductase subunit beta
[Gluconacetobacter hansenii ATCC 23769]
Length = 334
Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH + ENP +WT++ Q R + + E A+ + G
Sbjct: 204 VRDETLHCVSMARLFRVFVQENPEIWTQKLQDDIRQICRDIVEHEDAFIDLSFEMGPVEG 263
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L+A ++Y++F+ANRR Q+GL+ L+ NP PW+ E+++ + NFFE R TEY +
Sbjct: 264 LDAAQVKRYIRFVANRRLGQLGLDGLYDVATNPLPWVDEMVNAVEHANFFENRSTEYSRA 323
Query: 120 A-ELKW 124
A + W
Sbjct: 324 ATQGTW 329
>gi|255536887|ref|XP_002509510.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
communis]
gi|223549409|gb|EEF50897.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
communis]
Length = 329
Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +K + ++ + ++ +A +E + + +P VG+N
Sbjct: 200 RDEGLHCDFACLIYSLLKKKLSE-------ERVKGIVRDAVNIEREFVCDALPCALVGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G + + NPF WM E+I L+ + NFFE RV EYQ+ A
Sbjct: 253 GELMSQYIEFVADRLLGALGCGKEYNVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKAAV 310
Query: 122 LK 123
+
Sbjct: 311 MS 312
>gi|154337607|ref|XP_001565036.1| ribonucleoside-diphosphate reductase small chain [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134062075|emb|CAM45178.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 392
Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N
Sbjct: 265 RDEGLHTDFACLLYN------SHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G E + T+ PF +M E+I L+ + NFFE +V EYQ+
Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYNATQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGV 376
Query: 122 LK 123
+
Sbjct: 377 MS 378
>gi|169860861|ref|XP_001837065.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
okayama7#130]
gi|116501787|gb|EAU84682.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
okayama7#130]
Length = 414
Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + +K + + ++ EA +E + + +P +G+N
Sbjct: 278 RDEGMHTDFACLLFSHLKR-------RPHPDVVKRIITEAVAIEQEFLTDALPVKLIGMN 330
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G E ++ + NPF +M +I L+ + NFFE RV++Y +
Sbjct: 331 AELMCQYIEFVADRLLVSLGNEKVYN-STNPFDFMD-MISLQGKTNFFEKRVSDYAKAGV 388
>gi|154250961|ref|YP_001411785.1| ribonucleotide-diphosphate reductase subunit beta [Parvibaculum
lavamentivorans DS-1]
gi|154154911|gb|ABS62128.1| Ribonucleoside-diphosphate reductase [Parvibaculum lavamentivorans
DS-1]
Length = 319
Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVGL 60
RDE+LH + + ENP +WT+E ++ E A+ GL
Sbjct: 190 RDETLHTVSAMKLFRTFVDENPEIWTEELRRDIYKACETIIHHEDAFIDLAFEMGSIEGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A + Y+++IA+RR Q+ L+P+++ +NP PWM E+++ + NFFE R TEY + +
Sbjct: 250 SAQEVKNYIRYIADRRLVQLNLQPIYRTEKNPLPWMDEMLNGIEHTNFFENRATEYSKAS 309
Query: 121 E-LKWD 125
W+
Sbjct: 310 TRGSWE 315
>gi|15604372|ref|NP_220888.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
prowazekii str. Madrid E]
gi|51473694|ref|YP_067451.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia typhi
str. Wilmington]
gi|3861064|emb|CAA14964.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN (nrdB) [Rickettsia
prowazekii]
gi|51460006|gb|AAU03969.1| Ribonucleotide reductase [Rickettsia typhi str. Wilmington]
gi|292572126|gb|ADE30041.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia
prowazekii Rp22]
Length = 324
Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
+RDE+LH N I + ENP +WT+ +++ E A+ G G
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 248
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY +
Sbjct: 249 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATEYSKA 308
Query: 120 A-ELKWD 125
A W+
Sbjct: 309 ATTGSWE 315
>gi|322491821|emb|CBZ27094.1| ribonucleoside-diphosphate reductase small chain,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 392
Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N
Sbjct: 265 RDEGLHTDFACLLYN------SHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G E + T+ PF +M E+I L+ + NFFE +V EYQ+
Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGV 376
Query: 122 LK 123
+
Sbjct: 377 MS 378
>gi|224000239|ref|XP_002289792.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975000|gb|EED93329.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 335
Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 73/121 (60%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +++K+ K Q++ +T+++EA +E ++ + +P +G+N
Sbjct: 197 RDEGLHCSFACQLYSKLKL-------KLSQEEIQTIINEAVDVEKSFICDALPVSLIGMN 249
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + ++ ++NPF WM +I L+ + NFFE RV EYQ+
Sbjct: 250 SRLMAQYIEFVADRMLTDLGYQAMYG-SKNPFDWMD-MISLEGKTNFFEKRVGEYQKSGV 307
Query: 122 L 122
+
Sbjct: 308 M 308
>gi|157803769|ref|YP_001492318.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
canadensis str. McKiel]
gi|157785032|gb|ABV73533.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
canadensis str. McKiel]
Length = 324
Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
+RDE+LH N I + ENP +WT+ +++ E A+ G G
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYGACTTIVHFEDAFIELAFEVGGIEG 248
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY +
Sbjct: 249 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATEYSKA 308
Query: 120 A-ELKWD 125
A W+
Sbjct: 309 ATTGSWE 315
>gi|15892574|ref|NP_360288.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
conorii str. Malish 7]
gi|34580440|ref|ZP_00141920.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
sibirica 246]
gi|157828524|ref|YP_001494766.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165933242|ref|YP_001650031.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
rickettsii str. Iowa]
gi|229586746|ref|YP_002845247.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
africae ESF-5]
gi|238650260|ref|YP_002916112.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
peacockii str. Rustic]
gi|15619738|gb|AAL03189.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia conorii
str. Malish 7]
gi|28261825|gb|EAA25329.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
sibirica 246]
gi|157801005|gb|ABV76258.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165908329|gb|ABY72625.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
rickettsii str. Iowa]
gi|228021796|gb|ACP53504.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia africae
ESF-5]
gi|238624358|gb|ACR47064.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
peacockii str. Rustic]
Length = 328
Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
+RDE+LH N I + ENP +WT+ +++ E A+ G G
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEG 248
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A QY+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY +
Sbjct: 249 LTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRTTEYSKA 308
Query: 120 A-ELKWD 125
A W+
Sbjct: 309 ATTGSWE 315
>gi|322493026|emb|CBZ28311.1| ribonucleoside-diphosphate reductase small chain,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 388
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N
Sbjct: 261 RDEGLHTDFACLLYN------SHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G E + T+ PF +M E+I L+ + NFFE +V EYQ+
Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGV 372
Query: 122 LK 123
+
Sbjct: 373 MS 374
>gi|212274629|ref|NP_001130908.1| hypothetical protein LOC100192012 [Zea mays]
gi|195636980|gb|ACG37958.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
Length = 339
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + + R ++ +A +E + + +P VG+N
Sbjct: 209 RDEGLHCDFACLLYDLLRGKLDE-------SRVREIVADAVDIEREFVCDALPVALVGMN 261
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 262 GGLMSQYIEFVADRLLMALGHRKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 319
Query: 122 LK 123
+
Sbjct: 320 MS 321
>gi|194690416|gb|ACF79292.1| unknown [Zea mays]
gi|194704028|gb|ACF86098.1| unknown [Zea mays]
gi|195619132|gb|ACG31396.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
gi|223943167|gb|ACN25667.1| unknown [Zea mays]
Length = 339
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + + R ++ +A +E + + +P VG+N
Sbjct: 209 RDEGLHCDFACLLYDLLRGKLDE-------SRVREIVADAVDIEREFVCDALPVALVGMN 261
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 262 GGLMSQYIEFVADRLLMALGHRKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 319
Query: 122 LK 123
+
Sbjct: 320 MS 321
>gi|225451453|ref|XP_002269951.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|147804660|emb|CAN64484.1| hypothetical protein VITISV_012640 [Vitis vinifera]
Length = 329
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ ++ +E + + +P VG+N
Sbjct: 200 RDEGLHCDFACLLYSLLRNKLSE-------ERVKAIVADSVDIEREFVCDALPCALVGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G ++ + NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 253 SALMSQYIEFVADRLLGALGYGKMYNVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 310
Query: 122 LK 123
+
Sbjct: 311 MS 312
>gi|223996990|ref|XP_002288168.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975276|gb|EED93604.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 335
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +++ + P + ++ A +E + + +P +G+N
Sbjct: 210 RDEGLHCDFACLIYSKLVNQLPE-------SRIEEIITNAVEIEKEFVSDALPVELIGMN 262
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F A+R +G + + NPF WM E+I L+ + NFFE RV EY +
Sbjct: 263 SKLMCQYIEFCADRLLGALGCKKHY-MAVNPFEWM-EMISLQGKTNFFEKRVGEYAKSGV 320
Query: 122 L--KWD 125
K D
Sbjct: 321 GVNKDD 326
>gi|110763195|ref|XP_397443.3| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform
1 [Apis mellifera]
Length = 384
Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + H+ K ++ +++ +A +E + + +P +G+N
Sbjct: 259 RDEGLHCDFACLMFK-------HIVQKPSCERVTSIIKDAVKIEQEFLTDALPVEMIGMN 311
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G + ++ +ENPF +M I L+ + NFFE +V EYQ+
Sbjct: 312 CKLMCQYIEFVADRLLVELGCKKIY-MSENPFDFMEH-ISLEGKTNFFEKKVGEYQKWGV 369
Query: 122 LKW 124
++
Sbjct: 370 MQD 372
>gi|224007863|ref|XP_002292891.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971753|gb|EED90087.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 297
Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 11/126 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +++ + P + ++ A +E + + +P +G+N
Sbjct: 172 RDEGLHCDFACLLYSKLVNKLPE-------SRITKIITVAVEIEKEFVSDALPVELIGMN 224
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F A+R +G + NPF WM E+I L+ + NFFE RV EY +
Sbjct: 225 SKLMCDYIEFCADRLLGALGCSKFYN-ATNPFEWM-EMISLQGKTNFFEKRVGEYAKSGV 282
Query: 122 L--KWD 125
K D
Sbjct: 283 GVNKDD 288
>gi|332184137|gb|AEE26391.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Francisella cf. novicida 3523]
Length = 410
Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDES+H+ + ENP++ +F+++ M +A LE + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFIELAYELGTIEG 338
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398
Query: 120 A-ELKWD 125
WD
Sbjct: 399 GLTGSWD 405
>gi|126303832|ref|XP_001381111.1| PREDICTED: similar to hCG23833, [Monodelphis domestica]
Length = 493
Score = 126 bits (318), Expect = 6e-28, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K ++K + ++ A +E + E +P +G+N
Sbjct: 368 RDEGLHCDFACLMFK-------HLVHKPSEEKVKEIIINAVRIEQEFLTEALPVKLIGMN 420
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 421 CTLMKQYIEFVADRLMLELGFSKIF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 478
Query: 122 LK 123
+
Sbjct: 479 MS 480
>gi|297668213|ref|XP_002812343.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Pongo abelii]
Length = 449
Score = 126 bits (318), Expect = 6e-28, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +++ R ++ A +E + E +P +G+N
Sbjct: 324 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 376
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 377 CTLMKQYIEFVADRLMLELGFSKVF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 434
Query: 122 LK 123
+
Sbjct: 435 MS 436
>gi|154340038|ref|XP_001565976.1| ribonucleoside-diphosphate reductase small chain [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134063294|emb|CAM45500.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 388
Score = 126 bits (318), Expect = 7e-28, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N
Sbjct: 261 RDEGLHTDFACLLYN------SHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G E + T+ PF +M E+I L+ + NFFE +V EYQ+
Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHYNATQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGV 372
Query: 122 LK 123
+
Sbjct: 373 MS 374
>gi|58040422|ref|YP_192386.1| ribonucleotide-diphosphate reductase subunit beta [Gluconobacter
oxydans 621H]
gi|58002836|gb|AAW61730.1| Ribonucleoside-diphosphate reductase beta chain [Gluconobacter
oxydans 621H]
Length = 339
Score = 126 bits (318), Expect = 7e-28, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH I + EN +WT EF+++ + E A+ G
Sbjct: 204 VRDETLHCLSMIRLFRTFVRENSEIWTPEFREELTQICRTTVEHEDAFIDLCFEMGPVEG 263
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++ ++Y++FIA+RR Q+GL+P++ NP PW+ ++++ + NFFE R TEY +
Sbjct: 264 MSSEDVKRYIRFIADRRLTQLGLDPVYGQESNPLPWIDDMLNAVEHANFFENRSTEYSRA 323
Query: 120 AE-LKWD 125
+ W+
Sbjct: 324 STSGTWE 330
>gi|91205547|ref|YP_537902.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
bellii RML369-C]
gi|91069091|gb|ABE04813.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia bellii
RML369-C]
Length = 324
Score = 126 bits (318), Expect = 7e-28, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
+RDE+LH N I + ENP +WT+ + + E A+ G G
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTENLRSRIYKACTTIVHFEDAFIALAFEVGGIEG 248
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A Y+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY +
Sbjct: 249 LTADEVRLYIRYIADRRLFQLGLKDIYMVKNNPLPWLDEMLNGVEHTNFFENRATEYSKA 308
Query: 120 A-ELKWD 125
A W+
Sbjct: 309 ATTGSWE 315
>gi|157827263|ref|YP_001496327.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
bellii OSU 85-389]
gi|157802567|gb|ABV79290.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
bellii OSU 85-389]
Length = 324
Score = 126 bits (318), Expect = 7e-28, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
+RDE+LH N I + ENP +WT+ + + E A+ G G
Sbjct: 189 VRDETLHTNSIITLFKTFVRENPEVWTENLRSRIYKACTTIVHFEDAFIALAFEVGGIEG 248
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A Y+++IA+RR Q+GL+ ++ NP PW+ E+++ + NFFE R TEY +
Sbjct: 249 LTADEVRLYIRYIADRRLFQLGLKDIYMVKNNPLPWLDEMLNGVEHTNFFENRATEYSKA 308
Query: 120 A-ELKWD 125
A W+
Sbjct: 309 ATTGSWE 315
>gi|307110551|gb|EFN58787.1| hypothetical protein CHLNCDRAFT_34102 [Chlorella variabilis]
Length = 335
Score = 126 bits (318), Expect = 7e-28, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + H+ + +++ ++ +A +E + + +P +G+N
Sbjct: 207 RDEGLHTDFACLLYR-------HIHNRLSEERVAEIVTQAVEIEKEFICDALPVDLIGMN 259
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G ++ + NPF WM E+I L+ + NFFE RV +YQ+
Sbjct: 260 SRLMGQYIEFVADRLLVALGNPKVYNVS-NPFDWM-ELISLQGKTNFFEKRVGDYQKAGV 317
Query: 122 LK 123
+
Sbjct: 318 MN 319
>gi|260064013|ref|NP_001159403.1| ribonucleoside-diphosphate reductase subunit M2 isoform 1 [Homo
sapiens]
Length = 449
Score = 126 bits (318), Expect = 7e-28, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +++ R ++ A +E + E +P +G+N
Sbjct: 324 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 376
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 377 CTLMKQYIEFVADRLMLELGFSKVF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 434
Query: 122 LK 123
+
Sbjct: 435 MS 436
>gi|119621373|gb|EAX00968.1| hCG23833, isoform CRA_b [Homo sapiens]
gi|119621374|gb|EAX00969.1| hCG23833, isoform CRA_b [Homo sapiens]
Length = 449
Score = 126 bits (318), Expect = 7e-28, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +++ R ++ A +E + E +P +G+N
Sbjct: 324 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 376
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 377 CTLMKQYIEFVADRLMLELGFSKVF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 434
Query: 122 LK 123
+
Sbjct: 435 MS 436
>gi|308806626|ref|XP_003080624.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
tauri]
gi|116059085|emb|CAL54792.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
tauri]
Length = 241
Score = 126 bits (318), Expect = 7e-28, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K ++ R ++ EA +E + +++P VG+N
Sbjct: 113 RDEGLHRDFACLLYQML-------NNKPDEEVVRKIVTEAVEIEKEFVCDSLPCALVGMN 165
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A Y++++A+ +G+ + NPF WM E+I L+ + NFFE RV EYQ+
Sbjct: 166 AGMMSDYIEYVADHLFTSLGMPKEYNTA-NPFDWM-ELISLQGKTNFFEKRVGEYQKAGV 223
Query: 122 LK 123
+
Sbjct: 224 MN 225
>gi|15229476|ref|NP_189000.1| RNR2A (RIBONUCLEOTIDE REDUCTASE 2A); ribonucleoside-diphosphate
reductase [Arabidopsis thaliana]
gi|27735240|sp|P50651|RIR2A_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain A;
AltName: Full=Ribonucleoside-diphosphate reductase R2A
subunit; Short=AtRNR2; Short=Protein R2at; AltName:
Full=Ribonucleotide reductase small subunit A
gi|13937232|gb|AAK50108.1|AF372971_1 AT3g23580/MDB19_7 [Arabidopsis thaliana]
gi|9294514|dbj|BAB02776.1| ribonucleotide reductase [Arabidopsis thaliana]
gi|23505945|gb|AAN28832.1| At3g23580/MDB19_7 [Arabidopsis thaliana]
Length = 341
Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + P +K ++HEA +E + + +P +G+N
Sbjct: 212 RDEGLHCDFACLLYSLLQKQLP-------LEKVYQIVHEAVEIETEFVCKALPCDLIGMN 264
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY+QF+A+R +G E +K ENPF WM E I L+ + NFFE RV EYQ+ +
Sbjct: 265 SNLMSQYIQFVADRLLVTLGCERTYK-AENPFDWM-EFISLQGKTNFFEKRVGEYQKASV 322
Query: 122 LK 123
+
Sbjct: 323 MS 324
>gi|118497575|ref|YP_898625.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
subunit beta [Francisella tularensis subsp. novicida
U112]
gi|195536272|ref|ZP_03079279.1| ribonucleoside-diphosphate reductase, beta subunit domain
[Francisella tularensis subsp. novicida FTE]
gi|208779374|ref|ZP_03246720.1| ribonucleoside-diphosphate reductase, beta subunit domain
[Francisella novicida FTG]
gi|254372936|ref|ZP_04988425.1| hypothetical protein FTCG_00507 [Francisella tularensis subsp.
novicida GA99-3549]
gi|118423481|gb|ABK89871.1| bifunctional protein: glutaredoxin 3 /ribonucleotide reductase beta
subunit [Francisella novicida U112]
gi|151570663|gb|EDN36317.1| hypothetical protein FTCG_00507 [Francisella novicida GA99-3549]
gi|194372749|gb|EDX27460.1| ribonucleoside-diphosphate reductase, beta subunit domain
[Francisella tularensis subsp. novicida FTE]
gi|208745174|gb|EDZ91472.1| ribonucleoside-diphosphate reductase, beta subunit domain
[Francisella novicida FTG]
Length = 410
Score = 126 bits (317), Expect = 8e-28, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDES+H+ + ENP++ EF+++ M +A LE + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDKFIELAYELGTIEG 338
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398
Query: 120 A-ELKWD 125
WD
Sbjct: 399 GLTGSWD 405
>gi|225561749|gb|EEH10029.1| ribonucleotide reductase M2 B [Ajellomyces capsulatus G186AR]
gi|240275354|gb|EER38868.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
capsulatus H143]
gi|325091193|gb|EGC44503.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
capsulatus H88]
Length = 413
Score = 126 bits (317), Expect = 9e-28, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + + ++ EA +E + + +P +G+N
Sbjct: 274 RDEGLHTDFACLLFSHLR-------HRPSPEAVEKIITEAVTIEQEFLSDALPVALLGMN 326
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + ++ + NPF +M I L + NFFE RV +YQ+
Sbjct: 327 AKLMCQYIEFVADRLLVALGNKKVYN-STNPFDFMDN-ISLAGKTNFFEKRVGDYQKAGV 384
Query: 122 L 122
+
Sbjct: 385 M 385
>gi|225432510|ref|XP_002279943.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 340
Score = 126 bits (317), Expect = 9e-28, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + P QK ++HEA +E + E +P +G+N
Sbjct: 212 RDEGLHCDFACLLYSLLQKQLP-------WQKVHHIVHEAVEIETQFVCEALPCALIGMN 264
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G E + ENPF WM E I L+ + NFFE RV +YQ+ +
Sbjct: 265 ATLMSQYIKFVADRLLVALGYERKYNV-ENPFDWM-EFISLQGKANFFERRVGDYQKASI 322
Query: 122 LK 123
+
Sbjct: 323 MS 324
>gi|42520108|ref|NP_966023.1| ribonucleotide-diphosphate reductase subunit beta [Wolbachia
endosymbiont of Drosophila melanogaster]
gi|58696705|ref|ZP_00372253.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
endosymbiont of Drosophila simulans]
gi|58698234|ref|ZP_00373154.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
endosymbiont of Drosophila ananassae]
gi|225630036|ref|YP_002726827.1| ribonucleotide-diphosphate reductase beta subunit [Wolbachia sp.
wRi]
gi|42409845|gb|AAS13957.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
endosymbiont of Drosophila melanogaster]
gi|58535261|gb|EAL59340.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
endosymbiont of Drosophila ananassae]
gi|58537117|gb|EAL60231.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
endosymbiont of Drosophila simulans]
gi|225592017|gb|ACN95036.1| ribonucleotide-diphosphate reductase beta subunit [Wolbachia sp.
wRi]
Length = 329
Score = 126 bits (317), Expect = 9e-28, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
RDE+LH N I + N EN +W EF+++ + LE + GL
Sbjct: 193 RDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFIKLAFDLGDVEGL 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A Y++++ANRR Q+GLE ++ +NP PW+ E+++ + NFFE RVTEY + A
Sbjct: 253 SAEEVRNYIRYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 312
Query: 121 -ELKWD 125
+ W+
Sbjct: 313 TQGTWE 318
>gi|28393533|gb|AAO42187.1| putative ribonucleoside-diphosphate reductase small chain
[Arabidopsis thaliana]
Length = 243
Score = 126 bits (317), Expect = 9e-28, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ TK + + + ++ +A +E + + + VG+N
Sbjct: 111 RDEGLHCDFACLIYSLLR-------TKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMN 163
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G ++ T NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 164 RELMSQYIEFVADRLLAALGCGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 221
Query: 122 LK 123
+
Sbjct: 222 MS 223
>gi|254374389|ref|ZP_04989871.1| glutaredoxin [Francisella novicida GA99-3548]
gi|151572109|gb|EDN37763.1| glutaredoxin [Francisella novicida GA99-3548]
Length = 410
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDES+H+ + ENP++ EF+++ M +A LE + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDKFIELAYELGTIEG 338
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398
Query: 120 A-ELKWD 125
WD
Sbjct: 399 GLTGSWD 405
>gi|297831106|ref|XP_002883435.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
gi|297329275|gb|EFH59694.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
Length = 341
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + P +K ++HEA +E + + +P +G+N
Sbjct: 212 RDEGLHCDFACLLYSLLQKQLP-------LEKVYQIVHEAVEIETEFVCKALPCDLIGMN 264
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY+QF+A+R +G E +K ENPF WM E I L+ + NFFE RV EYQ+ +
Sbjct: 265 SNLMSQYIQFVADRLLVTLGCERRYK-AENPFDWM-EFISLQGKTNFFEKRVGEYQKASV 322
Query: 122 LK 123
+
Sbjct: 323 MS 324
>gi|134301991|ref|YP_001121960.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
subunit beta [Francisella tularensis subsp. tularensis
WY96-3418]
gi|134049768|gb|ABO46839.1| biofunctional glutaredoxin 3 protein/Ribonucleoside-diphosphate
reductase beta subunit [Francisella tularensis subsp.
tularensis WY96-3418]
Length = 410
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDES+H+ + ENP++ EF+++ M +A LE + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398
Query: 120 A-ELKWD 125
WD
Sbjct: 399 GLTGSWD 405
>gi|312889900|ref|ZP_07749444.1| Ribonucleoside-diphosphate reductase [Mucilaginibacter paludis DSM
18603]
gi|311297432|gb|EFQ74557.1| Ribonucleoside-diphosphate reductase [Mucilaginibacter paludis DSM
18603]
Length = 343
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 67/124 (54%), Gaps = 9/124 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H F + + + K ++ T++ +A +E + + +P +G+N
Sbjct: 217 RDEGMHCEFACLLYSML-------SNKLSKEAVTTIIADAVEIEKEFVTDALPVNLIGMN 269
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R ++G + L+ + NPF +M E+I L+ + NFFE RV +YQ+
Sbjct: 270 AKLMSQYIEFVADRWLQELGYDKLY-HATNPFDFM-EMISLQGKTNFFEKRVGDYQKSGV 327
Query: 122 LKWD 125
L D
Sbjct: 328 LNND 331
>gi|73544537|ref|XP_848163.1| ribonucleoside-diphosphate reductase small chain [Leishmania major
strain Friedlin]
gi|321438516|emb|CBZ12275.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania major strain Friedlin]
Length = 388
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N
Sbjct: 261 RDEGLHTDFACLLYN------SHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G E + + PF +M E+I L+ + NFFE RV EYQ+
Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHY-RSTQPFDFM-EMISLQGKTNFFEKRVGEYQKAGV 372
Query: 122 LK 123
+
Sbjct: 373 MS 374
>gi|56707665|ref|YP_169561.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
subunit beta [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110670136|ref|YP_666693.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
subunit beta [Francisella tularensis subsp. tularensis
FSC198]
gi|187931834|ref|YP_001891819.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
subunit beta [Francisella tularensis subsp. mediasiatica
FSC147]
gi|224456732|ref|ZP_03665205.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
subunit beta [Francisella tularensis subsp. tularensis
MA00-2987]
gi|254370173|ref|ZP_04986179.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254874478|ref|ZP_05247188.1| nrdB, biofunctional protein, glutaredoxin 3
protein/ribonucleoside-diphosphate reductase, beta
subunit [Francisella tularensis subsp. tularensis
MA00-2987]
gi|56604157|emb|CAG45165.1| Biofunctional protein, glutaredoxin 3
protein/Ribonucleoside-diphosphate reductase, beta
subunit [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110320469|emb|CAL08548.1| Biofunctional protein, glutaredoxin 3
protein/Ribonucleoside-diphosphate reductase, beta
subunit [Francisella tularensis subsp. tularensis
FSC198]
gi|151568417|gb|EDN34071.1| hypothetical protein FTBG_01287 [Francisella tularensis subsp.
tularensis FSC033]
gi|187712743|gb|ACD31040.1| bifunctional protein: glutaredoxin 3/ribonucleotide reductase beta
subunit [Francisella tularensis subsp. mediasiatica
FSC147]
gi|254840477|gb|EET18913.1| nrdB, biofunctional protein, glutaredoxin 3
protein/ribonucleoside-diphosphate reductase, beta
subunit [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282158827|gb|ADA78218.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
subunit beta [Francisella tularensis subsp. tularensis
NE061598]
Length = 410
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDES+H+ + ENP++ EF+++ M +A LE + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398
Query: 120 A-ELKWD 125
WD
Sbjct: 399 GLTGSWD 405
>gi|3220181|gb|AAC23560.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
Length = 354
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N
Sbjct: 227 RDEGLHTDFACLLYN------SHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 280
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G E + T+ PF +M E+I L+ + NFFE +V EYQ+
Sbjct: 281 AELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGV 338
Query: 122 LK 123
+
Sbjct: 339 MS 340
>gi|226294144|gb|EEH49564.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
brasiliensis Pb18]
Length = 325
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + + + ++ EA +E + + +P +G+N
Sbjct: 186 RDEGLHTDFACLLFSHLR-------HRPSPEAVQKIITEAVAIEQEFLTDALPCALLGMN 238
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + ++ + NPF +M I L + NFFE RV +YQ+
Sbjct: 239 AKLMCQYIEFVADRLLVALGNKKVYN-STNPFDFMDN-ISLTGKTNFFEKRVGDYQKAGV 296
Query: 122 L 122
+
Sbjct: 297 M 297
>gi|146090952|ref|XP_001466403.1| ribonucleoside-diphosphate reductase small chain [Leishmania
infantum JPCM5]
gi|321399462|emb|CBZ08664.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania infantum JPCM5]
Length = 392
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N
Sbjct: 265 RDEGLHTDFACLLYN------SHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G E + + PF +M E+I L+ + NFFE +V EYQ+
Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHY-RSTQPFDFM-EMISLQGKTNFFEKKVGEYQKAGV 376
Query: 122 LK 123
+
Sbjct: 377 MS 378
>gi|225677302|ref|ZP_03788281.1| ribonucleotide-diphosphate reductase beta [Wolbachia endosymbiont
of Muscidifurax uniraptor]
gi|225590665|gb|EEH11913.1| ribonucleotide-diphosphate reductase beta [Wolbachia endosymbiont
of Muscidifurax uniraptor]
Length = 329
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
RDE+LH N I + N EN +W EF+++ + LE + GL
Sbjct: 193 RDETLHTNSIIMLFNTFIKENNEIWDDEFKEELYSACRTIVELEDEFIKLAFDFGDVEGL 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A Y+ ++ANRR Q+GLE ++ +NP PW+ E+++ + NFFE RVTEY + A
Sbjct: 253 SAEEVRNYIHYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 312
Query: 121 -ELKWD 125
+ W+
Sbjct: 313 TQGTWE 318
>gi|10432587|dbj|BAB13815.1| ribonucleotide reductase small subunit [Lentinula edodes]
Length = 418
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + ++ + ++ EA +E + + +P +G+N
Sbjct: 287 RDEGMHTDFACLLFSHLRR-------RPHPDTVERIIKEAVAIEQEFLTDALPVSLIGMN 339
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + L+ + NPF +M +I L+ + NFFE RV++Y +
Sbjct: 340 ATLMCQYIEFVADRLLVALGNKKLYN-STNPFDFMD-MISLQGKTNFFEKRVSDYSKAGV 397
>gi|242777635|ref|XP_002479074.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
stipitatus ATCC 10500]
gi|218722693|gb|EED22111.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
stipitatus ATCC 10500]
Length = 406
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + + ++ +A +E + + +P +G+N
Sbjct: 268 RDEGLHTDFACLLFS-------HLNNRPNPKVIEDIIVDAVAIEQEFLTDALPCSLLGMN 320
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + + + NPF +M E I L + NFFE RV +YQ+
Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYN-STNPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 378
Query: 122 LK 123
+
Sbjct: 379 MN 380
>gi|295670491|ref|XP_002795793.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
brasiliensis Pb01]
gi|226284878|gb|EEH40444.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
brasiliensis Pb01]
Length = 325
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + + + ++ EA +E + + +P +G+N
Sbjct: 186 RDEGLHTDFACLLFSHLR-------HRPSPEAVQKIITEAVAIEQEFLTDALPCALLGMN 238
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + ++ + NPF +M I L + NFFE RV +YQ+
Sbjct: 239 AKLMCQYIEFVADRLLVALGNKKVYN-STNPFDFMDN-ISLTGKTNFFEKRVGDYQKAGV 296
Query: 122 L 122
+
Sbjct: 297 M 297
>gi|254369307|ref|ZP_04985319.1| hypothetical protein FTAG_00272 [Francisella tularensis subsp.
holarctica FSC022]
gi|157122257|gb|EDO66397.1| hypothetical protein FTAG_00272 [Francisella tularensis subsp.
holarctica FSC022]
Length = 410
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDES+H+ + ENP++ EF+++ M +A LE + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398
Query: 120 A-ELKWD 125
WD
Sbjct: 399 GLTGSWD 405
>gi|58260834|ref|XP_567827.1| ribonucleotide reductase small subunit [Cryptococcus neoformans
var. neoformans JEC21]
gi|134117207|ref|XP_772830.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255448|gb|EAL18183.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229908|gb|AAW46310.1| ribonucleotide reductase small subunit, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 430
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + N +K + + ++ EA ++E + + +P +G+N
Sbjct: 294 RDEGMHTDFACLLYNHLK-------HRCSTDEVHHIVSEALVIEKQFLTDALPCALIGIN 346
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QYM+F+A+R +G ++ NPF WM E+I L+ + NFFE+RV+ YQ+
Sbjct: 347 AHLMCQYMEFVADRLVVDLGYPKIYN-ATNPFDWM-ELISLQGKANFFESRVSAYQKANV 404
>gi|89256330|ref|YP_513692.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
subunit beta [Francisella tularensis subsp. holarctica
LVS]
gi|115314778|ref|YP_763501.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
subunit beta [Francisella tularensis subsp. holarctica
OSU18]
gi|156502403|ref|YP_001428469.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
subunit beta [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|167010840|ref|ZP_02275771.1| ribonucleotide-diphosphate reductase beta subunit [Francisella
tularensis subsp. holarctica FSC200]
gi|254367665|ref|ZP_04983686.1| biofunctional protein: glutaredoxin 3
protein-ribonucleoside-diphosphate reductase, beta
subunit [Francisella tularensis subsp. holarctica 257]
gi|290952877|ref|ZP_06557498.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
subunit beta [Francisella tularensis subsp. holarctica
URFT1]
gi|295313922|ref|ZP_06804487.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
subunit beta [Francisella tularensis subsp. holarctica
URFT1]
gi|89144161|emb|CAJ79423.1| Biofunctional protein, glutaredoxin 3
protein/Ribonucleoside-diphosphate reductase, beta
subunit [Francisella tularensis subsp. holarctica LVS]
gi|115129677|gb|ABI82864.1| ribonucleoside-diphosphate reductase [Francisella tularensis subsp.
holarctica OSU18]
gi|134253476|gb|EBA52570.1| biofunctional protein: glutaredoxin 3
protein-ribonucleoside-diphosphate reductase, beta
subunit [Francisella tularensis subsp. holarctica 257]
gi|156253006|gb|ABU61512.1| bifunctional glutaredoxin /ribonucleoside-diphosphate reductase
beta subunit [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 410
Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDES+H+ + ENP++ EF+++ M +A LE + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 338
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+
Sbjct: 339 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 398
Query: 120 A-ELKWD 125
WD
Sbjct: 399 GLTGSWD 405
>gi|321263951|ref|XP_003196693.1| ribonucleotide reductase small subunit [Cryptococcus gattii WM276]
gi|317463170|gb|ADV24906.1| Ribonucleotide reductase small subunit, putative [Cryptococcus
gattii WM276]
Length = 430
Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + N +K + + ++ EA ++E + + +P +G+N
Sbjct: 294 RDEGMHTDFACLLYNHLK-------HRCSTDEVHRIVSEALVIEKQFLTDALPCALIGIN 346
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QYM+F+A+R +G ++ NPF WM E+I L+ + NFFE+RV+ YQ+
Sbjct: 347 AHLMCQYMEFVADRLVVDLGYPKIYN-ATNPFDWM-ELISLQGKANFFESRVSAYQKANV 404
>gi|255551489|ref|XP_002516790.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
communis]
gi|223543878|gb|EEF45404.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
communis]
Length = 342
Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + QK + ++HEA +E + + +P +G+N
Sbjct: 213 RDEGLHCDFACLLYSLLQK-------QLQWQKVQQIVHEAVEIETEFVCDALPCALIGMN 265
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + + ENPF WM E I L+ + NFFE RV +YQ+ +
Sbjct: 266 STLMSQYIKFVADRLLVALGYQRKYNV-ENPFDWM-EFISLQGKANFFERRVGDYQKASV 323
Query: 122 LK 123
+
Sbjct: 324 MS 325
>gi|326437649|gb|EGD83219.1| ribonucleotide reductase M2 B [Salpingoeca sp. ATCC 50818]
Length = 408
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + + P ++ ++ +A +E + E +P +G+N
Sbjct: 280 RDEGLHCDFACLMFSMLHKKPPK-------ERVIGIIMDAVEIEQEFLTEALPVSLLGMN 332
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +Y++F+++R +G + ++ NPFP+M E I ++ + NFFE RV+EYQ+
Sbjct: 333 STLMREYIEFVSDRLLVSLGYDKVYN-ATNPFPFM-ENISIEGKTNFFERRVSEYQKSGV 390
Query: 122 L 122
+
Sbjct: 391 M 391
>gi|291412327|ref|XP_002722439.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Oryctolagus
cuniculus]
Length = 400
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N
Sbjct: 275 RDEGLHCDFACLMFK-------HLVHKPSEQRVQEIIVNAVRIEQEFLTEALPVKLIGMN 327
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 328 CALMKQYIEFVADRLLLELGFSKVF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 385
Query: 122 LK 123
+
Sbjct: 386 MS 387
>gi|301117384|ref|XP_002906420.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
infestans T30-4]
gi|262107769|gb|EEY65821.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
infestans T30-4]
Length = 379
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + +++ + P + ++ +A +E + +++P +G+N
Sbjct: 254 RDEGMHTDFACLLYSKLVTKLPE-------SRVHEIVRDAVTIEHEFVRDSLPVELIGMN 306
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R + +G+ ++ + +NPF WM +I L+ + NFFE RV EY +
Sbjct: 307 SGLMCQYIEFVADRLLYSLGVSKIY-HAKNPFDWMD-MISLQGKTNFFEKRVGEYSKAGV 364
Query: 122 L 122
Sbjct: 365 G 365
>gi|297805560|ref|XP_002870664.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
lyrata]
gi|297316500|gb|EFH46923.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ TK +++ ++++ +A +E + + +P VG+N
Sbjct: 201 RDEGLHCDFACLIYSLLR-------TKLDEERLKSIVCDAVEIEREFVCDALPCALVGMN 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G ++ + NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 254 RELMSQYIEFVADRLLTALGCGKVYGVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 311
Query: 122 LK 123
+
Sbjct: 312 MS 313
>gi|114327552|ref|YP_744709.1| ribonucleotide-diphosphate reductase subunit beta [Granulibacter
bethesdensis CGDNIH1]
gi|114315726|gb|ABI61786.1| ribonucleoside-diphosphate reductase beta chain [Granulibacter
bethesdensis CGDNIH1]
Length = 339
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDE+LH I + + EN +WT++ +Q+ R + E A+ G
Sbjct: 209 VRDETLHCLSIIKLFHVFIDENREIWTEDLRQEIRQICATIVEHEDAFIDLAFELGSVEG 268
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L+A + Y+++IA+RR Q+GLEPLF NP PW+ ++++ + NFFE R TEY +
Sbjct: 269 LDAAQVKSYIRYIADRRLIQLGLEPLFHVERNPLPWIDDMLNAVEHANFFENRATEYSRA 328
Query: 120 A-ELKWD 125
+ W+
Sbjct: 329 STVGTWE 335
>gi|57339646|gb|AAW49810.1| hypothetical protein FTT0532 [synthetic construct]
Length = 445
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDES+H+ + ENP++ EF+++ M +A LE + G
Sbjct: 305 IRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFIELAYELGTIEG 364
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A +QY++ I +RR +Q+GL+ ++ +NP W+ +++ NFFE RVTEY+
Sbjct: 365 LKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNFFENRVTEYEVA 424
Query: 120 A-ELKWD 125
WD
Sbjct: 425 GLTGSWD 431
>gi|261189551|ref|XP_002621186.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
dermatitidis SLH14081]
gi|239591422|gb|EEQ74003.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
dermatitidis SLH14081]
gi|239613047|gb|EEQ90034.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
dermatitidis ER-3]
gi|327356917|gb|EGE85774.1| ribonucleotide reductase M2 B [Ajellomyces dermatitidis ATCC 18188]
Length = 413
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + + ++ EA +E + + +P +G+N
Sbjct: 274 RDEGLHTDFACLLFSHLR-------HRPSPEAVERIITEAVTIEQEFLSDALPVALLGMN 326
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + ++ + NPF +M I L + NFFE RV +YQ+
Sbjct: 327 AKLMCQYIEFVADRLLVALGNKKVYN-STNPFDFMDN-ISLAGKTNFFEKRVGDYQKAGV 384
Query: 122 L 122
+
Sbjct: 385 M 385
>gi|124010268|ref|ZP_01694921.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
marina ATCC 23134]
gi|123983653|gb|EAY24093.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
marina ATCC 23134]
Length = 330
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N K + +++ A +E + + +P +G+N
Sbjct: 200 RDEGLHCDFACLLYNSYIK------NKLPNETVVSIIKNAVEIEKEFVTDALPVKLIGMN 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +Y++F+A+R ++G E + NPF +M E+I L+ + NFFE RV+EY +
Sbjct: 254 SDLMSEYIEFVADRLLVELGCEKQYNTA-NPFDFM-EMISLEGKTNFFEKRVSEYSKAGV 311
Query: 122 LK 123
Sbjct: 312 AN 313
>gi|266918|sp|P07201|RIR2_SPISO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit;
AltName: Full=p41
gi|10342|emb|CAA38919.1| M2 (small) subunit of ribonucleotide reductase [Spisula
solidissima]
Length = 384
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL K Q++ ++ EA +E + E +P +G+N
Sbjct: 256 RDEGLHCDFACLMFS-------HLVNKPSQERIHQIIDEAVKIEQVFLTEALPCRLIGMN 308
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++ + L+ ENPF +M I L+ + NFFE RV EYQ+
Sbjct: 309 CDLMRQYIEFVADRLLLELKCDKLYN-KENPFDFMEH-ISLEGKTNFFEKRVGEYQKMGV 366
Query: 122 LK 123
+
Sbjct: 367 MS 368
>gi|302843870|ref|XP_002953476.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
nagariensis]
gi|300261235|gb|EFJ45449.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
nagariensis]
Length = 400
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + + + ++ EA +E + + +P +G+N
Sbjct: 273 RDEGLHCDFACLLYGMLSKQLEE-------SRIKEIICEAVDIENEFCTDALPVDLIGMN 325
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + T NPF +M +I L+ + NFFE RV +YQ+
Sbjct: 326 SRLMAQYIEFVADRLLVALGCSKAYNVT-NPFDFMD-MISLQGKTNFFEKRVGDYQKSGV 383
Query: 122 L 122
+
Sbjct: 384 M 384
>gi|99036000|ref|ZP_01315041.1| hypothetical protein Wendoof_01000112 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 329
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
RDE+LH N I + N EN +W EF+++ + LE + GL
Sbjct: 193 RDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFIKLAFDLGDVEGL 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A Y++++ANRR Q+GLE ++ +NP PW+ E+++ + NFFE RVTEY + A
Sbjct: 253 SAEEVRNYIRYVANRRLMQLGLESIYDVNDNPTPWLDEILNGVEHTNFFENRVTEYSRAA 312
Query: 121 -ELKWD 125
+ W+
Sbjct: 313 TQGTWE 318
>gi|58700135|ref|ZP_00374651.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
endosymbiont of Drosophila ananassae]
gi|58533347|gb|EAL57830.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
endosymbiont of Drosophila ananassae]
Length = 225
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
RDE+LH N I + N EN +W EF+++ + LE + GL
Sbjct: 105 RDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFIKLAFDLGDVEGL 164
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A Y++++ANRR Q+GLE ++ +NP PW+ E+++ + NFFE RVTEY + A
Sbjct: 165 SAEEVRNYIRYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNFFENRVTEYSRAA 224
>gi|3914644|sp|O46310|RIR2_LEIAM RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
AltName: Full=Ribonucleotide reductase M2 subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|2828563|gb|AAC08302.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
Length = 345
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N
Sbjct: 218 RDEGLHTDFACLLYN------SHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 271
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G E + + PF +M E+I L+ + NFFE RV EYQ+
Sbjct: 272 AELMAQYIEFVADRLLVSLGEEKHY-RSTQPFDFM-EMISLQGKTNFFEKRVGEYQKAGV 329
Query: 122 LK 123
+
Sbjct: 330 MS 331
>gi|212533263|ref|XP_002146788.1| ribonucleotide reductase small subunit RnrA, putative [Penicillium
marneffei ATCC 18224]
gi|210072152|gb|EEA26241.1| ribonucleotide reductase small subunit RnrA, putative [Penicillium
marneffei ATCC 18224]
Length = 406
Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL T+ + ++ +A +E + + +P +G+N
Sbjct: 268 RDEGLHTDFACMLFS-------HLNTRPNPKVIEDIIVDAVAIEQEFLTDALPCALLGMN 320
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + + NPF +M E I L + NFFE RV +YQ+
Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYN-ATNPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 378
Query: 122 LK 123
+
Sbjct: 379 MN 380
>gi|302833193|ref|XP_002948160.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
nagariensis]
gi|300266380|gb|EFJ50567.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
nagariensis]
Length = 354
Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL + +++ ++ EA LE + E + +G+N
Sbjct: 219 RDEGLHCDFACCLY-------GHLKNRLSRERVVKIVDEAVRLEDEFCTEALSCELLGMN 271
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + + T NPF WM E+I L+ + NFFE RV EYQ+
Sbjct: 272 ADLMRQYIRFVADRLLVSLGYDKYYN-TVNPFDWM-EMISLQGKANFFERRVGEYQRACV 329
Query: 122 LKWD 125
+ D
Sbjct: 330 MAGD 333
>gi|225164890|ref|ZP_03727109.1| Ribonucleoside-diphosphate reductase [Opitutaceae bacterium TAV2]
gi|224800504|gb|EEG18881.1| Ribonucleoside-diphosphate reductase [Opitutaceae bacterium TAV2]
Length = 362
Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 1/123 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES H+ +++ + ENP +WT F+++ R + EA LE + + +P VGL
Sbjct: 232 LRDESNHIEVFRNLLMDLVEENPEIWTPGFKEELRETMREAVTLEKEFIRDCLPVNAVGL 291
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
Y+ +IA+RR +GL P+ +NP PW++E++D+KKE+NFFE RVTEYQ+
Sbjct: 292 AVDEFLTYIDYIADRRLEGVGLAPISATPIKNPLPWLAEMMDIKKEQNFFEGRVTEYQKA 351
Query: 120 AEL 122
+ L
Sbjct: 352 SSL 354
>gi|198420293|ref|XP_002130242.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit
M2 (Ribonucleotide reductase small subunit)
(Ribonucleotide reductase small chain) [Ciona
intestinalis]
Length = 393
Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K + + ++ +A +E + + +P +G+N
Sbjct: 268 RDEGLHCDFACLMFK-------HLLHKPSEARVVEIVKDAVTIEQEFLTDALPVALIGMN 320
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +FK ENPF +M E+I L+ + NFFE RV EYQ+
Sbjct: 321 NKLMKQYIEFVADRLLVELGCSKVFKV-ENPFDFM-ELISLEGKTNFFEKRVGEYQKAGV 378
Query: 122 L 122
+
Sbjct: 379 M 379
>gi|167627842|ref|YP_001678342.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
subunit beta [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597843|gb|ABZ87841.1| Ribonucleoside-diphosphate reductase [Francisella philomiragia
subsp. philomiragia ATCC 25017]
Length = 410
Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDES+H+ + ENP++ +F+++ M +A LE + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFIDLAYEIGTIEG 338
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A ++Y++ I +RR +Q+GL ++ +NP W+ +++ NFFE RVTEY+
Sbjct: 339 LKADEVKEYIRHITDRRLNQLGLNEIYNIDKNPLTWLEWILNGADHTNFFENRVTEYEVA 398
Query: 120 A-ELKWD 125
WD
Sbjct: 399 GLTGNWD 405
>gi|840719|emb|CAA54549.1| ribonucleotide reductase R2 [Arabidopsis thaliana]
Length = 340
Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F +I+ +++ P +K ++HEA +E + + +P +G+N
Sbjct: 211 RDEGLHCDFACLLISLLQLHVP-------LEKVYQIVHEAVEIETEFVCKALPCDLIGMN 263
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY+QF+A+R +G E +K ENPF WM E I L+ + NFFE RV EYQ+ +
Sbjct: 264 SNLMSQYIQFVADRLLVTLGCERTYK-AENPFDWM-EFISLQGKTNFFEKRVGEYQKASV 321
Query: 122 LK 123
+
Sbjct: 322 MS 323
>gi|146090970|ref|XP_001466408.1| ribonucleoside-diphosphate reductase small chain [Leishmania
infantum JPCM5]
gi|134070770|emb|CAM69127.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania infantum JPCM5]
Length = 388
Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N
Sbjct: 261 RDEGLHTDFACLLYN------SHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 314
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G E + + PF +M E+I L+ + NFFE +V EYQ+
Sbjct: 315 AELMAQYIEFVADRLLVSLGEEKHY-RSTQPFDFM-EMISLQGKTNFFEKKVGEYQKAGV 372
Query: 122 LK 123
+
Sbjct: 373 MS 374
>gi|262277047|ref|ZP_06054840.1| ribonucleoside-diphosphate reductase, beta subunit [alpha
proteobacterium HIMB114]
gi|262224150|gb|EEY74609.1| ribonucleoside-diphosphate reductase, beta subunit [alpha
proteobacterium HIMB114]
Length = 342
Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH N I + N ENP L + +++ E A+ G
Sbjct: 209 VRDETLHCNSMIKIFNTFCAENPGLLDESLKKEITDACRTIVEHEDAFIDLAFEMGPIEG 268
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A + Y+++IANRR Q+ L+ ++ ENP W+ +++ + NFFE R TEY +
Sbjct: 269 LTAQQIKDYIRWIANRRLVQLKLDEIYDVKENPLEWIDTMLNGVEHMNFFEGRATEYSKA 328
Query: 120 AE-LKW 124
+ W
Sbjct: 329 STKGSW 334
>gi|8101697|gb|AAF72618.1|AF252539_2 ribonucleotide reductase small subunit M2 [Leishmania amazonensis]
Length = 345
Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N
Sbjct: 218 RDEGLHTDFACLLYN------SHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 271
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G E + + PF +M E+I L+ + NFFE RV EYQ+
Sbjct: 272 AELMAQYIEFVADRLLVSLGEEKHY-RSTQPFDFM-EMISLQGKTNFFEKRVGEYQKAGV 329
Query: 122 LK 123
+
Sbjct: 330 MS 331
>gi|170089003|ref|XP_001875724.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
gi|164648984|gb|EDR13226.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
Length = 422
Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + +K + + + ++ EA +E + + +P +G+N
Sbjct: 281 RDEGMHTDFACLLFSHLKR-------RPHPEVVKHIIVEAVKIEQEFLTDALPVKLIGMN 333
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
A QY++F+A+R +G E + NPF +M +I L+ + NFFE RV++Y +
Sbjct: 334 ADLMCQYIEFVADRLLVSLGNEKHYN-KTNPFDFMD-MISLQGKTNFFEKRVSDYSKAG 390
>gi|241668401|ref|ZP_04755979.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
subunit beta [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876934|ref|ZP_05249644.1| glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254842955|gb|EET21369.1| glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella
philomiragia subsp. philomiragia ATCC 25015]
Length = 410
Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDES+H+ + ENP++ +F+++ M +A LE + G
Sbjct: 279 IRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFIDLAYEIGTIEG 338
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A ++Y++ I +RR +Q+GL ++ +NP W+ +++ NFFE RVTEY+
Sbjct: 339 LKADEVKEYIRHITDRRLNQLGLNEIYNIDKNPLTWLEWILNGADHTNFFENRVTEYEVA 398
Query: 120 A-ELKWD 125
WD
Sbjct: 399 GLTGNWD 405
>gi|321476700|gb|EFX87660.1| hypothetical protein DAPPUDRAFT_306462 [Daphnia pulex]
Length = 378
Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + P ++ +++ A +E + + +P +G+N
Sbjct: 251 RDEGLHTDFACVMFKHLVNKPPK-------ERIIEIINNAVKIEQEFLTDALPVEMIGMN 303
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G L+ +ENPF +M I L+ + NFFE +V EYQ+
Sbjct: 304 CRLMRQYIEFVADRLLLELGCTKLYN-SENPFDFMEH-ISLEGKTNFFEKKVGEYQKAGV 361
Query: 122 LK 123
+
Sbjct: 362 MN 363
>gi|302665732|ref|XP_003024474.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
gi|291188529|gb|EFE43863.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
Length = 529
Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + ++ EA +E + + +P +G+N
Sbjct: 393 RDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFLTDALPCALLGMN 445
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+
Sbjct: 446 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAGV 503
Query: 122 L 122
+
Sbjct: 504 M 504
>gi|145249942|ref|XP_001401310.1| ribonucleoside-diphosphate reductase small chain [Aspergillus niger
CBS 513.88]
gi|134081995|emb|CAK46680.1| unnamed protein product [Aspergillus niger]
Length = 396
Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + +Q ++ EA +E + + +P +G+N
Sbjct: 263 RDEGLHTDFACLLFS-------HLNNRPSKQVVEDIIVEAVGIEQEFLTDALPVALLGMN 315
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + + NPF +M I L + NFFE RV +YQ+
Sbjct: 316 SKLMCQYIEFVADRLLVALGNKKYYN-ATNPFDFMES-ISLAGKTNFFEKRVGDYQKAGV 373
Query: 122 L 122
+
Sbjct: 374 M 374
>gi|157869457|ref|XP_001683280.1| ribonucleoside-diphosphate reductase small chain [Leishmania major
strain Friedlin]
gi|68224164|emb|CAJ04657.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania major strain Friedlin]
Length = 392
Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N H+ K +++ ++ +A +E + + +P +G+N
Sbjct: 265 RDEGLHTDFACLLYN------SHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMN 318
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G E + T+ PF +M E+I L+ + NFFE +V EYQ+
Sbjct: 319 AELMAQYIEFVADRLLVSLGEEKHYHSTQ-PFEFM-EMISLQGKTNFFERKVGEYQKAGV 376
Query: 122 LK 123
+
Sbjct: 377 MS 378
>gi|56416698|ref|YP_153772.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
marginale str. St. Maries]
gi|254994906|ref|ZP_05277096.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
marginale str. Mississippi]
gi|255003042|ref|ZP_05278006.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
marginale str. Puerto Rico]
gi|255004164|ref|ZP_05278965.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
marginale str. Virginia]
gi|56387930|gb|AAV86517.1| ribonuceoside-diphosphate reductase beta chain [Anaplasma marginale
str. St. Maries]
Length = 324
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGL 60
RDE+LH I + N EN +W + +++ LE + GL
Sbjct: 193 RDETLHTESIIRLFNTFIHENQEIWDENLREELYGACRVIVSLEDEFIDLAFALGDVEGL 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A ++Y+++IANRR Q+ LEP++ NP PW+ E+++ + NFFE RVTEY + A
Sbjct: 253 SAAEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNFFENRVTEYSRAA 312
Query: 121 -ELKWD 125
E WD
Sbjct: 313 TEGTWD 318
>gi|303314521|ref|XP_003067269.1| ribonucleoside-diphosphate reductase small chain, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240106937|gb|EER25124.1| ribonucleoside-diphosphate reductase small chain, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|320037571|gb|EFW19508.1| ribonucleoside-diphosphate reductase small subunit [Coccidioides
posadasii str. Silveira]
Length = 408
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + + + ++ EA +E + + +P +G+N
Sbjct: 272 RDEGLHTDFACLLFSHLR-------HRPGPEAVQAIITEAVEIEKEFLTDALPCALLGMN 324
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + + NPF +M I L + NFFE RV +YQ+
Sbjct: 325 SKLMCQYIEFVADRLLVALGNKKFYN-ATNPFDFMDN-ISLSGKTNFFEKRVGDYQKAGV 382
Query: 122 L 122
+
Sbjct: 383 M 383
>gi|119174781|ref|XP_001239725.1| hypothetical protein CIMG_09346 [Coccidioides immitis RS]
Length = 408
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + + + ++ EA +E + + +P +G+N
Sbjct: 272 RDEGLHTDFACLLFSHLR-------HRPGPEAVQAIITEAVEIEKEFLTDALPCALLGMN 324
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + + NPF +M I L + NFFE RV +YQ+
Sbjct: 325 SKLMCQYIEFVADRLLVALGNKKFYN-ATNPFDFMDN-ISLSGKTNFFEKRVGDYQKAGV 382
Query: 122 L 122
+
Sbjct: 383 M 383
>gi|121713826|ref|XP_001274524.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
clavatus NRRL 1]
gi|119402677|gb|EAW13098.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
clavatus NRRL 1]
Length = 405
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + ++ ++ EA +E + + +P +G+N
Sbjct: 268 RDEGLHTDFACLLFS-------HLNNRPDKKVVEDIIVEAVAIEQEFLTDALPVALLGMN 320
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + + + NPF +M I L + NFFE RV +YQ+
Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYN-SPNPFDFMES-ISLAGKTNFFEKRVGDYQKAGV 378
Query: 122 L 122
+
Sbjct: 379 M 379
>gi|222475064|ref|YP_002563479.1| ribonuceoside-diphosphate reductase beta chain (nrdB) [Anaplasma
marginale str. Florida]
gi|222419200|gb|ACM49223.1| ribonuceoside-diphosphate reductase beta chain (nrdB) [Anaplasma
marginale str. Florida]
Length = 343
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGL 60
RDE+LH I + N EN +W + +++ LE + GL
Sbjct: 212 RDETLHTESIIRLFNTFIHENQEIWDENLREELYGACRVIVSLEDEFIDLAFALGDVEGL 271
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A ++Y+++IANRR Q+ LEP++ NP PW+ E+++ + NFFE RVTEY + A
Sbjct: 272 SAAEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNFFENRVTEYSRAA 331
Query: 121 -ELKWD 125
E WD
Sbjct: 332 TEGTWD 337
>gi|110636874|ref|YP_677081.1| ribonucleoside-diphosphate reductase 1 subunit beta [Cytophaga
hutchinsonii ATCC 33406]
gi|110279555|gb|ABG57741.1| ribonucleoside-diphosphate reductase 1, beta subunit [Cytophaga
hutchinsonii ATCC 33406]
Length = 324
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 8/121 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K ++ ++ EA +E + +++P +G+N
Sbjct: 198 RDEGLHCDFACLLYTKYIN------NKLPAERVIQIILEAVEIEKEFVTDSLPVDLIGMN 251
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +QY++F+A+R +G+ F NPF +M E+I L+ + NFFE RV+EYQ+
Sbjct: 252 ARLMQQYIEFVADRLLVALGVPKQFN-ATNPFDFM-EMISLQGKTNFFEKRVSEYQKSGV 309
Query: 122 L 122
+
Sbjct: 310 M 310
>gi|2465173|emb|CAA71741.1| ribonucleotide reductase (Class I) [Trypanosoma brucei brucei]
Length = 337
Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K + + ++ A +E + + +P +G+N
Sbjct: 210 RDEGLHTDFACLLYEKYI------VNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + + ++NPF +M +I L+ + NFFE +V EYQ+
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321
Query: 122 LK 123
+
Sbjct: 322 MS 323
>gi|261335316|emb|CBH18310.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei gambiense DAL972]
Length = 337
Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K + + ++ A +E + + +P +G+N
Sbjct: 210 RDEGLHTDFACLLYEKYI------VNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + + ++NPF +M +I L+ + NFFE +V EYQ+
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321
Query: 122 LK 123
+
Sbjct: 322 MS 323
>gi|88607783|ref|YP_505152.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
phagocytophilum HZ]
gi|88598846|gb|ABD44316.1| ribonucleoside-diphosphate reductase, beta subunit [Anaplasma
phagocytophilum HZ]
Length = 323
Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGL 60
RDESLH + I + N EN +W + +Q+ +LE + GL
Sbjct: 193 RDESLHTDSIIRLFNTFVHENGEIWDDDLKQELYDACKVIVMLEDEFIDLAFALGDVEGL 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A ++Y++FIANRR Q+ LEP++ ENP PW+ E+++ + NFFE RVTEY + A
Sbjct: 253 SACEVKRYIRFIANRRLKQLHLEPIYDVAENPLPWLDEILNGVEHTNFFENRVTEYARAA 312
Query: 121 -ELKWD 125
E W+
Sbjct: 313 TEGTWE 318
>gi|291244313|ref|XP_002742041.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
[Saccoglossus kowalevskii]
Length = 463
Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 68/122 (55%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL K +++ R ++ +A +E + +E +P G +G+N
Sbjct: 337 RDEGLHCDFACLIFS-------HLTYKPSKERIRNIITQAVDIEKEFWNEALPVGLIGMN 389
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
Y++F+A+R ++ + ++ + ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 390 VTLMNYYVEFVADRLLLELNCDKVY-HRENPFDFM-ENISLEGKTNFFEKRVGEYQKANV 447
Query: 122 LK 123
+
Sbjct: 448 MS 449
>gi|189199548|ref|XP_001936111.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187983210|gb|EDU48698.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 410
Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + + + ++ R ++ EA +E + + +P +G+N
Sbjct: 267 RDEGMHTDFACLLFSLL-------NNRPSNEEVRAIITEAVEIEQEFLSDALPCALLGMN 319
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G ++ NPF +M E I L + NFFE RV +YQ+
Sbjct: 320 ATLMCQYIEFVADRLLLALGNTKVYN-ATNPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 377
Query: 122 L 122
+
Sbjct: 378 M 378
>gi|74025550|ref|XP_829341.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei]
gi|70834727|gb|EAN80229.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei]
gi|261335315|emb|CBH18309.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei gambiense DAL972]
Length = 337
Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + K + + ++ A +E + + +P +G+N
Sbjct: 210 RDEGLHTDFACLLYEKY------IVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + + ++NPF +M +I L+ + NFFE +V EYQ+
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321
Query: 122 LK 123
+
Sbjct: 322 MS 323
>gi|67515571|ref|XP_657671.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
gi|40746089|gb|EAA65245.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
gi|259489743|tpe|CBF90266.1| TPA: Ribonucleotide reductase [Source:UniProtKB/TrEMBL;Acc:Q9HEW8]
[Aspergillus nidulans FGSC A4]
Length = 406
Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + ++ ++ EA +E + + +P +G+N
Sbjct: 269 RDEGLHTDFACLLFS-------HLNWRPSKKVVEDIIVEAVAIEKEFLTDALPCALLGMN 321
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + F NPF +M I L + NFFE RV +YQ+
Sbjct: 322 AKLMCQYIEFVADRLLVALGNKKYFN-ATNPFDFMES-ISLAGKTNFFEKRVGDYQKAGV 379
Query: 122 L 122
+
Sbjct: 380 M 380
>gi|3914640|sp|O15910|RIR2_TRYBB RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase R2 subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|2411479|gb|AAB70705.1| ribonucleotide reductase small subunit [Trypanosoma brucei]
gi|261335314|emb|CBH18308.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei gambiense DAL972]
Length = 337
Score = 123 bits (310), Expect = 5e-27, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + K + + ++ A +E + + +P +G+N
Sbjct: 210 RDEGLHTDFACLLYEKY------IVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + + ++NPF +M +I L+ + NFFE +V EYQ+
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321
Query: 122 LK 123
+
Sbjct: 322 MS 323
>gi|88658048|ref|YP_507564.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
chaffeensis str. Arkansas]
gi|88599505|gb|ABD44974.1| ribonucleoside-diphosphate reductase, beta subunit [Ehrlichia
chaffeensis str. Arkansas]
Length = 324
Score = 123 bits (310), Expect = 5e-27, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH I + N EN +W +Q+ LE + + G
Sbjct: 192 VRDETLHTESIIRLFNTFIQENYEIWDDSLKQELYEACRIIVSLEDEFINLAFACGDVEG 251
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L++ ++Y+++IANRR Q+ LEP++ +NP W+ E+++ + NFFE RVTEY +
Sbjct: 252 LSSKEVKEYIRYIANRRLLQLNLEPIYDTNKNPLLWLDEILNGVEHTNFFENRVTEYARA 311
Query: 120 A-ELKWD 125
A E W+
Sbjct: 312 ATEGTWE 318
>gi|145349720|ref|XP_001419276.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579507|gb|ABO97569.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 329
Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + K ++ R ++ EA +E + +++P VG+N
Sbjct: 201 RDEGLHRDFACLLFSML-------NNKPSEETIRKIVTEAVEIEKEFVCDSLPCALVGMN 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A Y++++A+ +GL + T NPF WM E+I L+ + NFFE RV EYQ+
Sbjct: 254 AGMMSDYIEYVADHLFCSLGLAKEYN-TTNPFDWM-ELISLQGKTNFFEKRVGEYQKAGV 311
Query: 122 LK 123
+
Sbjct: 312 MN 313
>gi|169779219|ref|XP_001824074.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
oryzae RIB40]
gi|238499845|ref|XP_002381157.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
flavus NRRL3357]
gi|83772813|dbj|BAE62941.1| unnamed protein product [Aspergillus oryzae]
gi|220692910|gb|EED49256.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
flavus NRRL3357]
Length = 405
Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + Q ++ EA +E + + +P +G+N
Sbjct: 269 RDEGLHTDFACLLFS-------HLNNRPDPQIVEDVIVEAVSIEKEFLTDALPCALLGMN 321
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G F NPF +M I L + NFFE RV +YQ+
Sbjct: 322 SNLMCQYIEFVADRLLVALGNNKYFN-ATNPFDFMDN-ISLAGKTNFFEKRVGDYQKAGV 379
Query: 122 L 122
+
Sbjct: 380 M 380
>gi|150863757|ref|XP_001382334.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
CBS 6054]
gi|149385013|gb|ABN64305.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
CBS 6054]
Length = 417
Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + + ++ EA +E + + +P +G+N
Sbjct: 286 RDEGLHTDFACLLFS-------HLQNRPDAEIVEKIITEAVKIEKEFFTDALPSSLLGMN 338
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + ++ T NPF +M E I L + NFFE RV++YQ+
Sbjct: 339 AELMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 396
Query: 122 L 122
+
Sbjct: 397 M 397
>gi|118383611|ref|XP_001024960.1| ribonucleoside-diphosphate reductase, beta subunit family protein
[Tetrahymena thermophila]
gi|89306727|gb|EAS04715.1| ribonucleoside-diphosphate reductase, beta subunit family protein
[Tetrahymena thermophila SB210]
Length = 376
Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + + ++ ++ EA +E + E +P +G+N
Sbjct: 251 RDEGLHTDFACLLYSMLNKKLTK-------EEIYEIITEAVEIEKEFISEALPVELIGMN 303
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +QY++F+A+R +G+ + ++NPF WM +I ++ + NFFE RV EYQ+
Sbjct: 304 SNMMKQYLEFVADRLLFALGVPKFYN-SKNPFEWMD-MISIQGKTNFFEKRVGEYQKANV 361
Query: 122 LK 123
+
Sbjct: 362 MS 363
>gi|74025552|ref|XP_829342.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei]
gi|70834728|gb|EAN80230.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei]
Length = 337
Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 64/122 (52%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + K + + ++ A L+E + + +P +G+N
Sbjct: 210 RDEGLHTDFACLLYEKY------IVNKLPRDRVLEIICNAVLIEREFICDALPVRLIGMN 263
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + + ++NPF +M +I L+ + NFFE +V EYQ+
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321
Query: 122 LK 123
+
Sbjct: 322 MS 323
>gi|167519412|ref|XP_001744046.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778008|gb|EDQ91624.1| predicted protein [Monosiga brevicollis MX1]
Length = 329
Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 9/123 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +K + +++ ++ +A +E + +P G +G+N
Sbjct: 204 RDEGLHTDFACLMFSMLKK-------RPSKERVTGIIMDAVEIEQDFLTNALPCGLLGMN 256
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +QY++F+++R +G E +F +ENPF +M I ++ + NFFE RV EYQ+
Sbjct: 257 ATLMKQYIEFVSDRLLVALGCEKIFN-SENPFDFMES-ISIEGKTNFFEKRVGEYQKAGV 314
Query: 122 LKW 124
+
Sbjct: 315 MAD 317
>gi|118089009|ref|XP_001231545.1| PREDICTED: similar to small subunit ribonucleotide reductase
isoform 1 [Gallus gallus]
Length = 392
Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K +++ + ++ A L+E + E +P +G+N
Sbjct: 267 RDEGLHCDFACLMFKHLIR-------KPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 319
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 320 CTLMKQYIEFVADRLMLELGFRKIYKV-ENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 377
Query: 122 LK 123
+
Sbjct: 378 MS 379
>gi|68171256|ref|ZP_00544659.1| Ribonucleoside-diphosphate reductase [Ehrlichia chaffeensis str.
Sapulpa]
gi|67999338|gb|EAM85984.1| Ribonucleoside-diphosphate reductase [Ehrlichia chaffeensis str.
Sapulpa]
Length = 294
Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH I + N EN +W +Q+ LE + + G
Sbjct: 162 VRDETLHTESIIRLFNTFIQENYEIWDDSLKQELYEACRIIVSLEDEFINLAFACGDVEG 221
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L++ ++Y+++IANRR Q+ LEP++ +NP W+ E+++ + NFFE RVTEY +
Sbjct: 222 LSSKEVKEYIRYIANRRLLQLNLEPIYDTNKNPLLWLDEILNGVEHTNFFENRVTEYARA 281
Query: 120 A-ELKWD 125
A E W+
Sbjct: 282 ATEGTWE 288
>gi|50545856|ref|XP_500466.1| YALI0B03630p [Yarrowia lipolytica]
gi|49646332|emb|CAG82692.1| YALI0B03630p [Yarrowia lipolytica]
Length = 403
Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + ++ ++ EA +E + + +P G +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLENRPSKKIVEDVIVEAVGIEQEFLTDALPCGLLGMN 324
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G ++ + NPF +M E I L + NFFE RV++YQ+
Sbjct: 325 AKLMCQYIEFVADRLLVALGNSKVYN-STNPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 382
Query: 122 L 122
+
Sbjct: 383 M 383
>gi|75224904|sp|Q6Y657|RIR2B_ARATH RecName: Full=Putative ribonucleoside-diphosphate reductase small
chain B; AltName: Full=Ribonucleoside-diphosphate
reductase R2B subunit; AltName: Full=Ribonucleotide
reductase small subunit B
gi|37729626|gb|AAO62422.1| ribonucleotide reductase small subunit [Arabidopsis thaliana]
Length = 333
Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ TK + + + ++ +A +E + + +P VG+N
Sbjct: 201 RDEGLHCDFACLIYSLLR-------TKLDEDRLKAIVCDAVEIEREFVCDALPCALVGMN 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G ++ + NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 254 RELMSQYIEFVADRLLAALGCAKVYGVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKASI 311
Query: 122 LK 123
+
Sbjct: 312 MS 313
>gi|85109237|ref|XP_962820.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
OR74A]
gi|30316285|sp|Q9C167|RIR2_NEUCR RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|16273691|gb|AAK14804.2| small subunit of ribonucleotide reductase [Neurospora crassa]
gi|28924456|gb|EAA33584.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
OR74A]
Length = 410
Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + +Q + ++ +A +E + E +P +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNNRPSKQLIQEIIVDAVRIEQEFLTEALPCALLGMN 324
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +QY++F+A+R +G E ++ + NPF +M E I L + NFFE RV +YQ+
Sbjct: 325 ADLMKQYIEFVADRLLVALGNEKIY-RSTNPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 382
Query: 122 LK 123
+
Sbjct: 383 MN 384
>gi|149408710|ref|XP_001506085.1| PREDICTED: similar to 5,10-methenyltetrahydrofolate synthetase
[Ornithorhynchus anatinus]
Length = 394
Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +++ + ++ A +E + E +P +G+N
Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEERVKEIIINAVRIEQEFLTEALPVKLIGMN 321
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +FK ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 322 CTLMKQYIEFVADRLLLELGFSKIFKV-ENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 379
Query: 122 LK 123
+
Sbjct: 380 MS 381
>gi|289620013|emb|CBI53457.1| unnamed protein product [Sordaria macrospora]
Length = 410
Score = 123 bits (309), Expect = 7e-27, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + +Q + ++ +A +E + E +P +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNNRPSKQLIQDIIVDAVRIEQEFLTEALPCALLGMN 324
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +QY++F+A+R +G E ++ + NPF +M E I L + NFFE RV +YQ+
Sbjct: 325 ADLMKQYIEFVADRLLVALGNEKVY-RSTNPFDFM-ENISLGGKTNFFEKRVADYQKAGV 382
Query: 122 LK 123
+
Sbjct: 383 MN 384
>gi|4894211|gb|AAD32302.1| ribonucleotide reductase small subunit [Glycine max]
Length = 339
Score = 123 bits (309), Expect = 7e-27, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++HEA +E + + +P +G+N
Sbjct: 210 RDEGLHCDFACLLYSLLRK-------PLISDQVHKLVHEAVEIETEFVCDALPCALIGMN 262
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + + ENPF WM E I L+ + NFFE RV +YQ+ +
Sbjct: 263 SVLMSQYIKFVADRLLVALGYQRKYNV-ENPFDWM-EFISLQGKANFFERRVGDYQKASV 320
Query: 122 LK 123
+
Sbjct: 321 MS 322
>gi|315041979|ref|XP_003170366.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
gypseum CBS 118893]
gi|311345400|gb|EFR04603.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
gypseum CBS 118893]
Length = 408
Score = 123 bits (309), Expect = 7e-27, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + ++ EA +E + + +P +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNHRPEPSAVEAIITEAVTIEQEFLTDALPCALLGMN 324
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+
Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAGV 382
Query: 122 L 122
+
Sbjct: 383 M 383
>gi|326472581|gb|EGD96590.1| ribonucleotide reductase small subunit RnrA [Trichophyton tonsurans
CBS 112818]
Length = 408
Score = 123 bits (309), Expect = 7e-27, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + ++ EA +E + + +P +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPNAVEAIITEAVTIEQEFLTDALPCALLGMN 324
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+
Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAGV 382
Query: 122 L 122
+
Sbjct: 383 M 383
>gi|330921941|ref|XP_003299625.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
gi|311326599|gb|EFQ92269.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
Length = 410
Score = 123 bits (309), Expect = 7e-27, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + + + ++ R ++ EA +E + + +P +G+N
Sbjct: 267 RDEGMHTDFACLLFSLL-------NNRPSKESVRAIITEAVEIEQEFLSDALPCALLGMN 319
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G ++ NPF +M E I L + NFFE RV +YQ+
Sbjct: 320 ATLMCQYIEFVADRLLLALGNTKVYN-ATNPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 377
Query: 122 L 122
+
Sbjct: 378 M 378
>gi|256421019|ref|YP_003121672.1| ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
2588]
gi|256035927|gb|ACU59471.1| Ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
2588]
Length = 323
Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH F + ++ P ++ T++ +A +E + + +P +G+N
Sbjct: 198 RDEGLHCEFACLLYGMLENRLPE-------EQVHTIIRDAVAIEKEFITDALPVALIGMN 250
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +Y++F+A+R ++G +F NPF +M E+I L+ + NFFE RV +YQ+
Sbjct: 251 SKLMSEYIEFVADRWLSELGYTKIFNTA-NPFDFM-EMISLQGKTNFFEKRVGDYQKAGV 308
Query: 122 LK 123
+
Sbjct: 309 MS 310
>gi|74025554|ref|XP_829343.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei]
gi|70834729|gb|EAN80231.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei]
Length = 337
Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + K + + ++ A +E + + +P +G+N
Sbjct: 210 RDEGLHTDFACLLYEKY------IVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + + ++NPF +M +I L+ + NFFE +V EYQ+
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321
Query: 122 LK 123
+
Sbjct: 322 MS 323
>gi|281200507|gb|EFA74725.1| ribonucleotide reductase small subunit [Polysphondylium pallidum
PN500]
Length = 335
Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +++ K T++ +A E + E++P +G+N
Sbjct: 201 RDEGLHCDFACLLYQKLQ-------NKLDNNTIETIIRDAVACEKEFITESLPVDLIGMN 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ S QY++F A+R +G + ++ + NPF WM E+I L+++ NFFE +V+EYQ+
Sbjct: 254 SRSMSQYIEFCADRLLLSLGYKKIYN-SSNPFDWM-EMISLQRKTNFFEGKVSEYQKSGV 311
Query: 122 LK 123
K
Sbjct: 312 AK 313
>gi|312381384|gb|EFR27142.1| hypothetical protein AND_06323 [Anopheles darlingi]
Length = 390
Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K +++ ++ +A ++E + + +P +G+N
Sbjct: 265 RDEGLHCDFACLMFKYLVQ-------KPSRKRVTDIIRDAVMIEQEFLTKALPVDMLGMN 317
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G E ++ T+NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 318 CELMSQYIEFVADRLLVELGCEKVYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQKWGV 375
Query: 122 L 122
+
Sbjct: 376 M 376
>gi|119478853|ref|XP_001259462.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
fischeri NRRL 181]
gi|119407616|gb|EAW17565.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
fischeri NRRL 181]
Length = 405
Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + ++ ++ EA +E + E +P +G+N
Sbjct: 268 RDEGLHTDFACLLFS-------HLNHRPDKKVVEDIIVEAVAIEQEFLTEALPVALLGMN 320
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + + + NPF +M I L + NFFE RV +YQ+
Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYYN-SSNPFDFMES-ISLAGKTNFFEKRVGDYQKAGV 378
Query: 122 L 122
+
Sbjct: 379 M 379
>gi|269958883|ref|YP_003328672.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
centrale str. Israel]
gi|269848714|gb|ACZ49358.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
centrale str. Israel]
Length = 332
Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGL 60
RDE+LH I + N EN +W + + LE + GL
Sbjct: 201 RDETLHTESIIRLFNTFIHENQEIWDANLRAELYGACRVIVSLEDEFIDLAFALGDVEGL 260
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A ++Y+++IANRR Q+ LEP++ NP PW+ E+++ + NFFE RVTEY + A
Sbjct: 261 SASEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNFFENRVTEYSRAA 320
Query: 121 -ELKWD 125
E WD
Sbjct: 321 TEGTWD 326
>gi|328855581|gb|EGG04707.1| hypothetical protein MELLADRAFT_49061 [Melampsora larici-populina
98AG31]
Length = 385
Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + + ++ +A +E + + +P +G+N
Sbjct: 248 RDEGLHTDFACLLFS-------HLERRPHPDTVQAIISQAVEIEKEFLSDALPCKLIGMN 300
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + + ENPF +M E+I L + NFFE RV++Y +
Sbjct: 301 ADLMCQYIEFVADRLLVALGNDKFYN-AENPFDFM-EMISLSGKTNFFEKRVSDYAKAGV 358
Query: 122 LK 123
+
Sbjct: 359 MT 360
>gi|156387375|ref|XP_001634179.1| predicted protein [Nematostella vectensis]
gi|156221259|gb|EDO42116.1| predicted protein [Nematostella vectensis]
Length = 384
Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K ++ R ++ +A ++E + +P +G+N
Sbjct: 259 RDEGLHCDFACLMYK-------YLVNKPDEETVRGIIKDAVVIEQEFLTSALPVKLIGMN 311
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R + + ++ ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 312 CALMRQYIEFVADRLLVALNCQKVYN-AENPFDFM-ENISLEGKTNFFEKRVGEYQKSGV 369
Query: 122 LKW 124
+
Sbjct: 370 MSD 372
>gi|146418573|ref|XP_001485252.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
6260]
gi|146390725|gb|EDK38883.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
6260]
Length = 418
Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + + ++ EA +E + + +P +G+N
Sbjct: 286 RDEGLHTDFACLLFS-------HLQNRPDPEIVEKIITEAVDIEKEFFTDALPISLLGMN 338
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G + ++ NPF +M E I L + NFFE RV++YQ+
Sbjct: 339 CKLMCQYVEFVADRLLVALGNKKIYNVA-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 396
Query: 122 L 122
+
Sbjct: 397 M 397
>gi|4557845|ref|NP_001025.1| ribonucleoside-diphosphate reductase subunit M2 isoform 2 [Homo
sapiens]
gi|400979|sp|P31350|RIR2_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|36155|emb|CAA42181.1| small subunit ribonucleotide reductase [Homo sapiens]
gi|251637|gb|AAA09577.1| ribonucleotide reductase R2 subunit [Homo sapiens]
gi|12804875|gb|AAH01886.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
gi|14029165|gb|AAK51163.1| ribonucleotide reductase M2 subunit [Homo sapiens]
gi|20988810|gb|AAH30154.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
gi|62702173|gb|AAX93099.1| unknown [Homo sapiens]
gi|123981920|gb|ABM82789.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
gi|123996753|gb|ABM85978.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
gi|189053955|dbj|BAG36462.1| unnamed protein product [Homo sapiens]
gi|261861600|dbj|BAI47322.1| ribonucleotide reductase M2 [synthetic construct]
Length = 389
Score = 123 bits (308), Expect = 9e-27, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +++ R ++ A +E + E +P +G+N
Sbjct: 264 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 316
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 317 CTLMKQYIEFVADRLMLELGFSKVF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 374
Query: 122 LK 123
+
Sbjct: 375 MS 376
>gi|45360749|ref|NP_989048.1| ribonucleotide reductase M2, gene 1 [Xenopus (Silurana) tropicalis]
gi|38174078|gb|AAH61353.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
tropicalis]
Length = 378
Score = 123 bits (308), Expect = 9e-27, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + H+ K +Q+ R ++ +A +E + E +P +G+N
Sbjct: 253 RDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFLTEALPVELIGMN 305
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G + +FK +ENPF +M E I L+ + NFFE +V EYQ+
Sbjct: 306 CKLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFFEKKVAEYQKMGV 363
Query: 122 LK 123
+
Sbjct: 364 MS 365
>gi|260950985|ref|XP_002619789.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
gi|238847361|gb|EEQ36825.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 123 bits (308), Expect = 9e-27, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + ++ EA +E Y + +P +G+N
Sbjct: 289 RDEGLHTDFACLLFS-------HLNNRPNPAIVEKIITEAVTIEKEYFTDALPASLLGMN 341
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G + ++ T NPF +M E I L + NFFE RV++YQ+
Sbjct: 342 CDLMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 399
Query: 122 L 122
+
Sbjct: 400 M 400
>gi|302696699|ref|XP_003038028.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
gi|300111725|gb|EFJ03126.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
Length = 377
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H F + + ++ + + ++ EA +E + + +P +G+N
Sbjct: 257 RDEGMHTEFACLLFSHLR-------HRPHPSVVQRIVKEAVAIEHEFLSDALPVSLIGMN 309
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R + +G ++ NPF +M +I L+ + NFFE RV+EY +
Sbjct: 310 AALMRQYIEFVADRLLYSLGQNKIYN-ATNPFDFMD-MISLQGKTNFFEKRVSEYAKANV 367
>gi|310798394|gb|EFQ33287.1| ribonucleotide reductase [Glomerella graminicola M1.001]
Length = 413
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +K + +Q + ++ +A +E + E +P +G+N
Sbjct: 275 RDEGLHTDFACLLYSHLK-------NRPSKQVIQDIIVDAVQIEQEFLTEALPCALLGMN 327
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +QY++F+A+R +G + ++K + NPF +M E I L + NFFE RV +YQ+
Sbjct: 328 SNLMKQYIEFVADRLLVALGNDKVYK-SSNPFDFM-ENISLGGKTNFFEKRVADYQKAGV 385
Query: 122 LK 123
+
Sbjct: 386 MN 387
>gi|70997335|ref|XP_753417.1| ribonucleotide reductase small subunit RnrA [Aspergillus fumigatus
Af293]
gi|66851053|gb|EAL91379.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
fumigatus Af293]
gi|159126856|gb|EDP51972.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
fumigatus A1163]
Length = 405
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + ++ ++ EA +E + + +P +G+N
Sbjct: 268 RDEGLHTDFACLLFS-------HLNHRPDKKVIEDIIVEAVAIEQEFLTDALPVALLGMN 320
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + F + NPF +M I L + NFFE RV +YQ+
Sbjct: 321 SKLMCQYIEFVADRLLVALGNKKYFN-SPNPFDFMES-ISLAGKTNFFEKRVGDYQKAGV 378
Query: 122 L 122
+
Sbjct: 379 M 379
>gi|296421312|ref|XP_002840209.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636423|emb|CAZ84400.1| unnamed protein product [Tuber melanosporum]
Length = 397
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N HL + QQ + ++ EA +E + E +P +G+N
Sbjct: 262 RDEGLHTDFACLLFN-------HLNNRPSQQAVQDIIVEAVGIEQEFLTEALPCALLGMN 314
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +QY++F+A+R +G + NPF +M I L + NFFE RV +YQ+
Sbjct: 315 SKLMKQYIEFVADRLLLSLGNPKFYN-ATNPFDFMES-ISLAGKTNFFEKRVGDYQKAGV 372
Query: 122 L 122
+
Sbjct: 373 M 373
>gi|255530602|ref|YP_003090974.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
2366]
gi|255343586|gb|ACU02912.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
2366]
Length = 324
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F + +K K Q++ ++ +A +E + + +P +G+N
Sbjct: 197 RDEGSHCEFACLLYGMLK-------NKLSQEQVHGIIRDAVEIEKEFVTDALPVALIGMN 249
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R ++G ++ NPF +M E+I L+ + NFFE RV +YQ+
Sbjct: 250 AKLMSQYIEFVADRWLQELGYSKIYN-ATNPFDFM-EMISLQGKTNFFEKRVGDYQKSGV 307
Query: 122 LK 123
L
Sbjct: 308 LT 309
>gi|168015485|ref|XP_001760281.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688661|gb|EDQ75037.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 330
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K + + ++ EA ++E + E + VG+N
Sbjct: 200 RDEGLHCDFACLLYTLL-------NNKLSEDRVYEIVCEAVVIEQEFVCEALSCDLVGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+Y+ F+A+R +G + + NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 253 KTLMSEYIDFVADRLLVSLGYPKKYN-SHNPFDWM-ELISLQGKTNFFEKRVGEYQKASV 310
Query: 122 LK 123
+
Sbjct: 311 MS 312
>gi|255954081|ref|XP_002567793.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589504|emb|CAP95650.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 400
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + H+ + + ++ EA +E + + +P +G+N
Sbjct: 264 RDEGLHTDFACLLFS-------HMNHRPDPKVVEEIIVEAVGIEQEFLTDALPCALLGMN 316
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + + NPF +M I L + NFFE RV +YQ+
Sbjct: 317 SKLMCQYIEFVADRLLVALGNKKYYNSA-NPFDFMES-ISLAGKTNFFEKRVGDYQKAGV 374
Query: 122 L 122
+
Sbjct: 375 M 375
>gi|118089007|ref|XP_419948.2| PREDICTED: similar to small subunit ribonucleotide reductase
isoform 2 [Gallus gallus]
Length = 384
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K +++ + ++ A L+E + E +P +G+N
Sbjct: 259 RDEGLHCDFACLMFKHLIR-------KPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 311
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 312 CTLMKQYIEFVADRLMLELGFRKIYKV-ENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 369
Query: 122 LK 123
+
Sbjct: 370 MS 371
>gi|300676950|gb|ADK26821.1| ribonucleotide reductase M2 [Zonotrichia albicollis]
Length = 390
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +++ R ++ A L+E + E +P +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLIHKPSEERVREIIMNAVLIEQEFLTEALPVKLIGMN 317
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375
Query: 122 LK 123
+
Sbjct: 376 MS 377
>gi|224100309|ref|XP_002311826.1| predicted protein [Populus trichocarpa]
gi|222851646|gb|EEE89193.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + QK ++ EA +E + E +P +G+N
Sbjct: 213 RDEGLHCDFACLLYSLLQR-------QLHWQKVYHIVGEAVEIETKFVCEALPCALIGMN 265
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A Y++F+A+R +G + + ENPF WM E I L+ + NFFE RV +YQ+ +
Sbjct: 266 ATLMGDYIKFVADRLLVALGYQKKYNV-ENPFDWM-EFISLQGKANFFERRVGDYQKASV 323
Query: 122 LK 123
+
Sbjct: 324 MS 325
>gi|171913278|ref|ZP_02928748.1| ribonucleotide-diphosphate reductase subunit beta [Verrucomicrobium
spinosum DSM 4136]
Length = 361
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 48/122 (39%), Positives = 74/122 (60%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES H+ ++ + ENP +WT EF+++ ++ EA LE + + +P VGL
Sbjct: 232 LRDESNHIKVFRNLFMDLIDENPEIWTPEFREELVELMKEAVALEKEFIRDCLPVAAVGL 291
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
A E Y+ FIA+RR +GL L NP PW++E+ D++KE+NFFE VT+YQ+ +
Sbjct: 292 TAGEFELYIDFIADRRLASVGLPALTPGIVNPLPWLAEMQDIRKEQNFFEGTVTDYQKAS 351
Query: 121 EL 122
L
Sbjct: 352 SL 353
>gi|145537171|ref|XP_001454302.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422057|emb|CAK86905.1| unnamed protein product [Paramecium tetraurelia]
Length = 507
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + H+ K Q+ ++ A +E + E +P +G+N
Sbjct: 382 RDEGLHTDFACLLYK-------HMINKLSIQRVHEIISSAVEIEKEFISEALPVELIGMN 434
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +QY++F+A+R +G ++ ++NPF WM +I L+ + NFFE RV +YQ+
Sbjct: 435 SNLMKQYIEFVADRLIFALGAPKIYN-SKNPFEWMD-MISLQGKTNFFERRVGDYQKAGV 492
Query: 122 LK 123
+
Sbjct: 493 MS 494
>gi|323453718|gb|EGB09589.1| hypothetical protein AURANDRAFT_60022 [Aureococcus anophagefferens]
Length = 393
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 7/120 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +++ + ++ ++ EA E+ + + +P VG+N
Sbjct: 265 RDEGLHCDFACALYSRLPGHL-----RLSDAEATAIISEAVDTEVDFVTDALPVSLVGMN 319
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A Y++F+A+R +G ++ NPF +M E+I ++ + NFFE RV EYQ+
Sbjct: 320 AKLMTDYVKFVADRLLASLGHPKIYGAA-NPFDFM-ELISMQGKTNFFEKRVAEYQKANV 377
>gi|327298815|ref|XP_003234101.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
CBS 118892]
gi|326464279|gb|EGD89732.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
CBS 118892]
Length = 408
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + ++ EA +E + + +P +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFLTDALPCALLGMN 324
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+
Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAGV 382
Query: 122 L 122
+
Sbjct: 383 M 383
>gi|255037048|ref|YP_003087669.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
18053]
gi|254949804|gb|ACT94504.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
18053]
Length = 331
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH F + + H+ + Q++ ++ +A +E + E +P +G+N
Sbjct: 201 RDEGLHCEFACLLYTK------HILNQLPQERVIEIMLDAVEIEKEFVSEALPVSLIGMN 254
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +QY+++IA+ ++G F NPF +M E+I L + NFFE RV EYQ+
Sbjct: 255 ADLMKQYIEYIADFWLERLGCPKQFGSA-NPFDFM-ELISLPGKTNFFEKRVGEYQKAGV 312
Query: 122 LK 123
+
Sbjct: 313 MS 314
>gi|196233679|ref|ZP_03132520.1| Ribonucleoside-diphosphate reductase [Chthoniobacter flavus
Ellin428]
gi|196222349|gb|EDY16878.1| Ribonucleoside-diphosphate reductase [Chthoniobacter flavus
Ellin428]
Length = 390
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 71/123 (57%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES H+ G ++ Q+ ENP +WT EF+ + + E LE + + +P+ VG+
Sbjct: 260 LRDESNHIELGRYILTQLIAENPDIWTPEFRAELVEFMREGVELEKEFVRDCLPEDGVGM 319
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
Y+++ A+RR + L L NPF W+ EVI L+KEKNFFETRVTEYQ
Sbjct: 320 TQADFLTYVEYNADRRLAGLDLPALSGVKTNPFAWLDEVIFLRKEKNFFETRVTEYQTSG 379
Query: 121 ELK 123
LK
Sbjct: 380 SLK 382
>gi|88682973|gb|AAI05512.1| RRM2 protein [Bos taurus]
Length = 338
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N
Sbjct: 213 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 265
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 266 CTLMKQYIEFVADRLMLELGFSKVF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 323
Query: 122 LK 123
+
Sbjct: 324 MS 325
>gi|10344|emb|CAA26307.1| unnamed protein product [Spisula solidissima]
Length = 300
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL K Q++ ++ EA +E + E +P +G+N
Sbjct: 172 RDEGLHCDFACLMFS-------HLVNKPSQERIHQIIDEAVKIEQVFLTEALPCRLIGMN 224
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++ + L+ ENPF +M I L+ + NFFE RV EYQ+
Sbjct: 225 CDLMRQYIEFVADRLLLELKCDKLYN-KENPFDFMEH-ISLEGKTNFFEKRVGEYQKMGV 282
Query: 122 LK 123
+
Sbjct: 283 MS 284
>gi|296809816|ref|XP_002845246.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
gi|238842634|gb|EEQ32296.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
Length = 405
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + ++ EA +E + + +P +G+N
Sbjct: 269 RDEGLHTDFACLLFS-------HLNYRPDPTAVEAIITEAVSIEQEFLTDALPCALLGMN 321
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+
Sbjct: 322 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAGV 379
Query: 122 L 122
+
Sbjct: 380 M 380
>gi|76630263|ref|XP_880783.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 3 [Bos
taurus]
gi|297480612|ref|XP_002691528.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 2 [Bos
taurus]
gi|296482362|gb|DAA24477.1| ribonucleotide reductase M2 polypeptide isoform 2 [Bos taurus]
Length = 341
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N
Sbjct: 216 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 268
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 269 CTLMKQYIEFVADRLMLELGFSKVF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 326
Query: 122 LK 123
+
Sbjct: 327 MS 328
>gi|2500209|sp|Q60561|RIR2_MESAU RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|49650|emb|CAA48232.1| ribonucleotide reductase [Mesocricetus auratus]
Length = 386
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEQRVQEIITNAVRIEQEFLTEALPVKLIGMN 317
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +FK ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFKV-ENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375
Query: 122 LK 123
+
Sbjct: 376 MS 377
>gi|302497417|ref|XP_003010709.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
gi|291174252|gb|EFE30069.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
Length = 408
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + ++ EA +E + + +P +G+N
Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFLTDALPCALLGMN 324
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + + T NPF +M I L + NFFE RV +YQ+
Sbjct: 325 AKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFFEKRVGDYQKAGV 382
Query: 122 L 122
+
Sbjct: 383 M 383
>gi|145553335|ref|XP_001462342.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430181|emb|CAK94969.1| unnamed protein product [Paramecium tetraurelia]
Length = 355
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K Q+ ++ A +E + E +P +G+N
Sbjct: 230 RDEGLHTDFACLLYK-------HLVNKMSNQRIHEIISSAVEIEKEFISEALPVELIGMN 282
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +QY++F+A+R +G ++ ++NPF WM +I L+ + NFFE RV +YQ+
Sbjct: 283 SNLMKQYIEFVADRLIFALGAPKIYN-SKNPFEWMD-MISLQGKTNFFERRVGDYQKAGV 340
Query: 122 LK 123
+
Sbjct: 341 MS 342
>gi|148705043|gb|EDL36990.1| ribonucleotide reductase M2 [Mus musculus]
Length = 411
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +Q+ R ++ A +E + E +P +G+N
Sbjct: 286 RDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMN 338
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 339 CTLMKQYIEFVADRLMLELGFNKIF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 396
Query: 122 LK 123
+
Sbjct: 397 MS 398
>gi|294945135|ref|XP_002784568.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239897674|gb|EER16364.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 238
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 8/121 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N + +T+ ++ ++ A +E + E++P +G+N
Sbjct: 96 RDEGLHADFACLLYNMMH------YTRLPDERVHEIVRGAVDVERVFISESLPVSLIGMN 149
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +Y++F+A+R +G L+ NPF WM ++I L+ + NFFE RV EYQ+G
Sbjct: 150 SQLMCRYIEFVADRLLVALGHPKLYN-ATNPFDWM-KMISLQGKTNFFEKRVGEYQKGGV 207
Query: 122 L 122
+
Sbjct: 208 M 208
>gi|289177074|ref|NP_001165948.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 2 [Homo
sapiens]
Length = 423
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N
Sbjct: 298 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 350
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 351 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 408
Query: 122 L 122
+
Sbjct: 409 M 409
>gi|148232385|ref|NP_001085389.1| ribonucleotide reductase M2, gene 1 [Xenopus laevis]
gi|48735122|gb|AAH72071.1| MGC78958 protein [Xenopus laevis]
Length = 406
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + H+ K +Q+ R ++ +A +E + E +P +G+N
Sbjct: 281 RDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFLTEALPVELIGMN 333
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G + +FK +ENPF +M E I L+ + NFFE +V EYQ+
Sbjct: 334 CTLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFFEKKVGEYQKMGV 391
Query: 122 L 122
+
Sbjct: 392 M 392
>gi|75076796|sp|Q4R7Q7|RIR2_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|67969020|dbj|BAE00865.1| unnamed protein product [Macaca fascicularis]
Length = 389
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +++ R ++ A +E + E +P +G+N
Sbjct: 264 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRVEQEFLTEALPVKLIGMN 316
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 317 CTLMKQYIEFVADRLMLELGFSKVF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 374
Query: 122 LK 123
+
Sbjct: 375 MS 376
>gi|327403795|ref|YP_004344633.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
16823]
gi|327319303|gb|AEA43795.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
16823]
Length = 324
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 67/122 (54%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + +++ + ++ +A +E + + +P +G+N
Sbjct: 198 RDEGLHCDFACLLYTK------HLIHQLSKEQVQEIILDAVEIEKEFVTDALPVKLIGMN 251
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R ++G +F T NPF +M +I ++ + NFFE RV EYQ+
Sbjct: 252 ADLMAQYIEFVADRLLTELGNPKVFN-TTNPFDFMD-MISIQGKTNFFEKRVAEYQKSGV 309
Query: 122 LK 123
+
Sbjct: 310 MS 311
>gi|301772278|ref|XP_002921557.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Ailuropoda melanoleuca]
Length = 393
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +Q+ R ++ A +E + E +P +G+N
Sbjct: 268 RDEGLHCDFACLMFK-------HLVHKPSEQRVREIIINAVRIEQEFLTEALPVKLIGMN 320
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 321 CTLMKQYIEFVADRLMLELGFSKVF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 378
Query: 122 LK 123
+
Sbjct: 379 MS 380
>gi|324519017|gb|ADY47264.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
Length = 376
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +K K +++ ++ EA +E Y E +P G +G+N
Sbjct: 251 RDEGLHRDFACLMFSHLKK-------KPNKERIYEIIREAVKIEQEYLTEALPVGLIGMN 303
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++++A+ ++ L+ ENPF +M+ I ++ + NFFE RV+EYQ+
Sbjct: 304 CELMSQYIEYVADHLLTELKCPKLYNM-ENPFDFMAR-ISIEAKTNFFEKRVSEYQKAGV 361
Query: 122 LKWD 125
L D
Sbjct: 362 LSTD 365
>gi|293343290|ref|XP_002725449.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Rattus
norvegicus]
gi|293355176|ref|XP_002728627.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Rattus
norvegicus]
Length = 390
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIITNAVRIEQEFLTEALPVKLIGMN 317
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +FK ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFKV-ENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375
Query: 122 LK 123
+
Sbjct: 376 MS 377
>gi|116191729|ref|XP_001221677.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
gi|88181495|gb|EAQ88963.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
Length = 409
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + +Q ++ +A +E + E +P +G+N
Sbjct: 271 RDEGLHTDFACLLFS-------HLNNRPSKQIIEDIIVDAVRIEQEFLTEALPCALLGMN 323
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +QY++F+A+R +G E ++ + NPF +M E I L + NFFE RV EYQ+
Sbjct: 324 SNLMKQYIEFVADRLLVALGNEKVY-RSTNPFDFM-ENISLGGKTNFFEKRVGEYQKAGV 381
Query: 122 L 122
+
Sbjct: 382 M 382
>gi|190896544|gb|ACE96785.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRKKLSE-------ERVKGIVKDAVDIEREFVVDALPCALVGMN 170
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEY 223
>gi|11878241|gb|AAG40862.1| ribonucleotide reductase [Emericella nidulans]
Length = 406
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + ++ ++ EA +E + + +P +G+N
Sbjct: 269 RDEGLHTDFACLLFS-------HLNWRPSKKVVEDIIVEAVAIEKEFLTDALPCALLGMN 321
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + F NPF +M I L + NFFE RV +YQ+
Sbjct: 322 AKLMCQYIEFVADRLLVALGNKEYFN-ATNPFDFMES-ISLAGKTNFFEKRVGDYQKAGV 379
Query: 122 L 122
+
Sbjct: 380 M 380
>gi|7106399|ref|NP_033130.1| ribonucleoside-diphosphate reductase subunit M2 [Mus musculus]
gi|132626|sp|P11157|RIR2_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|22218698|pdb|1H0N|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
To Model The Reactive Diferrous State
gi|22218699|pdb|1H0O|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
To Model The Reactive Diferrous State
gi|52696260|pdb|1W68|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
Subunit R2 Under Oxidizing Conditions. A Fully Occupied
Dinuclear Iron Cluster.
gi|52696261|pdb|1W69|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
Subunit R2 Under Reducing Conditions. A Fully Occupied
Dinuclear Iron Cluster And Bound Acetate.
gi|157834262|pdb|1XSM|A Chain A, Protein R2 Of Ribonucleotide Reductase From Mouse
gi|50720|emb|CAA33707.1| M2 ribonucleotide reductase [Mus musculus]
gi|200768|gb|AAA40062.1| ribonucleotide reductase subunit M2 [Mus musculus]
gi|26354034|dbj|BAC40647.1| unnamed protein product [Mus musculus]
gi|54887418|gb|AAH85136.1| Ribonucleotide reductase M2 [Mus musculus]
gi|74139292|dbj|BAE40793.1| unnamed protein product [Mus musculus]
gi|74151119|dbj|BAE27683.1| unnamed protein product [Mus musculus]
gi|74179887|dbj|BAE36508.1| unnamed protein product [Mus musculus]
gi|74188932|dbj|BAE39238.1| unnamed protein product [Mus musculus]
gi|74189151|dbj|BAE39331.1| unnamed protein product [Mus musculus]
gi|74206394|dbj|BAE24918.1| unnamed protein product [Mus musculus]
gi|74211991|dbj|BAE40165.1| unnamed protein product [Mus musculus]
Length = 390
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +Q+ R ++ A +E + E +P +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMN 317
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375
Query: 122 LK 123
+
Sbjct: 376 MS 377
>gi|168031987|ref|XP_001768501.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680214|gb|EDQ66652.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 331
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + ++ ++ EA +E + E + VG+N
Sbjct: 201 RDEGLHCDFACLLYTLLINKLSE-------ERVYEIVCEAVEIEREFVCEALSCDLVGMN 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+Y+ F+A+R +G + NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 254 KILMSEYIDFVADRLLVSLGYRKKYNAL-NPFDWM-ELISLQGKTNFFEKRVGEYQKASV 311
Query: 122 LK 123
+
Sbjct: 312 MS 313
>gi|148284015|ref|YP_001248105.1| ribonucleotide-diphosphate reductase subunit beta [Orientia
tsutsugamushi str. Boryong]
gi|146739454|emb|CAM79093.1| ribonucleoside-diphosphate reductase beta chain [Orientia
tsutsugamushi str. Boryong]
Length = 329
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
+RDE+LH N I + E P +WT++ + + E A+ G G
Sbjct: 189 VRDETLHTNSIITLFKTFIQEYPEVWTEQLKSRIYEACCTIIHFEDAFIDLAFEVGGVEG 248
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ- 118
L A ++Y+++IA+RR Q+GL+ + +NP W+ ++++ + NFFE RVTEY +
Sbjct: 249 LEARDVKKYIRYIADRRLLQLGLKENYLIEQNPLTWLDQILNGVEHTNFFENRVTEYTRS 308
Query: 119 GAELKWD 125
WD
Sbjct: 309 ATTGSWD 315
>gi|71648907|ref|XP_813233.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
strain CL Brener]
gi|70878098|gb|EAN91382.1| ribonucleoside-diphosphate reductase small chain, putative
[Trypanosoma cruzi]
Length = 337
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + ++ K +++ R ++ A +E + + +P +G+N
Sbjct: 210 RDEGLHTDFACLLY------ENYIVNKLPKERIREIICSAVDIEREFICDAIPVRLLGMN 263
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A Y++F+A+R +G E + ++NPF +M E+I L+ + NFFE +V EYQ+
Sbjct: 264 ADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFFEKKVGEYQKAGV 321
Query: 122 LK 123
+
Sbjct: 322 MS 323
>gi|159465835|ref|XP_001691128.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
reinhardtii]
gi|158279814|gb|EDP05574.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
reinhardtii]
Length = 394
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + T+ + + + ++ EA +E + E +P +G+N
Sbjct: 267 RDEGLHCDFACMLFSML-------NTRIDETRVKQIIVEAVEIEQEFCTEALPVDLIGMN 319
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY+QF+A+R +G + NPF +M E+I L+ + NFFE RV +YQ+
Sbjct: 320 SRLMAQYIQFVADRLLVSLGCAKQYNVV-NPFEFM-EMISLQGKTNFFEKRVGDYQKNGV 377
Query: 122 L 122
+
Sbjct: 378 M 378
>gi|189184364|ref|YP_001938149.1| ribonucleotide-diphosphate reductase subunit beta [Orientia
tsutsugamushi str. Ikeda]
gi|189181135|dbj|BAG40915.1| ribonucleoside-diphosphate reductase beta chain [Orientia
tsutsugamushi str. Ikeda]
Length = 359
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVG 59
+RDE+LH N I + E P +WT++ + + E A+ G G
Sbjct: 204 VRDETLHTNSIITLFKTFIQEYPEVWTEQLKSRIYEACCTIIHFEDAFIDLAFEVGGVEG 263
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ- 118
L A ++Y+++IA+RR Q+GL+ + +NP W+ ++++ + NFFE RVTEY +
Sbjct: 264 LEARDVKKYIRYIADRRLLQLGLKENYLIEQNPLTWLDQILNGVEHTNFFENRVTEYTRS 323
Query: 119 GAELKWD 125
WD
Sbjct: 324 ATTGSWD 330
>gi|258567064|ref|XP_002584276.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
reesii 1704]
gi|237905722|gb|EEP80123.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
reesii 1704]
Length = 401
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + I+ + ++ EA +E + + +P +G+N
Sbjct: 265 RDEGLHTDFACLLFSHIR-------HRPTPAAVEAIITEAVEIEKEFLTDALPCALLGMN 317
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + + + NPF +M I L + NFFE RV +YQ+
Sbjct: 318 SKLMCQYIEFVADRLLVALGNKKFY-HATNPFDFMDN-ISLAGKTNFFEKRVGDYQKAGV 375
Query: 122 L 122
+
Sbjct: 376 M 376
>gi|327261313|ref|XP_003215475.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 3 [Anolis carolinensis]
Length = 391
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +++ R ++ A +E + E +P +G+N
Sbjct: 266 RDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFLTEALPVNLIGMN 318
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 319 CTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 376
Query: 122 LK 123
+
Sbjct: 377 MS 378
>gi|73666936|ref|YP_302952.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia canis
str. Jake]
gi|72394077|gb|AAZ68354.1| Ribonucleoside-diphosphate reductase [Ehrlichia canis str. Jake]
Length = 324
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH I + N EN +W + + LE + + G
Sbjct: 192 VRDETLHTESIIRLFNTFVQENYEIWDDSLKHELYEACKIIVSLEDEFINLAFACGDVEG 251
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L+A ++Y+++IANRR Q+ LEP++ +NP W+ E+++ + NFFE RVTEY +
Sbjct: 252 LSAKEVKKYIRYIANRRLLQLNLEPIYDANKNPLLWLDEILNGVEHTNFFENRVTEYARA 311
Query: 120 A-ELKWD 125
A E W+
Sbjct: 312 ATEGTWE 318
>gi|302409182|ref|XP_003002425.1| ribonucleoside-diphosphate reductase small chain [Verticillium
albo-atrum VaMs.102]
gi|261358458|gb|EEY20886.1| ribonucleoside-diphosphate reductase small chain [Verticillium
albo-atrum VaMs.102]
Length = 414
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + +Q + ++ +A +E + E +P G +G+N
Sbjct: 276 RDEGLHTDFACLLFS-------HLNNRPSKQTVQDIVTDAVNIEQEFLTEALPCGLLGMN 328
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +QY++F+A+R +G E ++K NPF +M E I L + NFFE RV +YQ+
Sbjct: 329 ATLMKQYIEFVADRLLVALGNEKVYK-ATNPFDFM-ENISLGGKTNFFEKRVADYQKAGV 386
Query: 122 L 122
+
Sbjct: 387 M 387
>gi|76630259|ref|XP_584910.2| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
taurus]
gi|297480610|ref|XP_002691527.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
taurus]
gi|296482361|gb|DAA24476.1| ribonucleotide reductase M2 polypeptide isoform 1 [Bos taurus]
Length = 389
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N
Sbjct: 264 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 316
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 317 CTLMKQYIEFVADRLMLELGFSKVF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 374
Query: 122 LK 123
+
Sbjct: 375 MS 376
>gi|149248382|ref|XP_001528578.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
elongisporus NRRL YB-4239]
gi|146448532|gb|EDK42920.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
elongisporus NRRL YB-4239]
Length = 422
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + + ++ EA +E + + +P +G+N
Sbjct: 294 RDEGLHTDFACLLFS-------HLENRPDPKIVEKIISEAVEIEKEFFTDALPVSLLGMN 346
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G E ++K T NPF +M E I L + NFFE RV++YQ+
Sbjct: 347 CKLMCQYVEFVADRLLVALGNEKIYKVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 404
Query: 122 L 122
+
Sbjct: 405 M 405
>gi|322817571|gb|EFZ25271.1| ribonucleoside-diphosphate reductase small chain, putative
[Trypanosoma cruzi]
Length = 337
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + ++ K ++ R ++ A +E + +++P +G+N
Sbjct: 210 RDEGLHTDFACLLY------ENYIVNKLPTERIREIICSAVDIEREFICDSIPVRLLGMN 263
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A Y++F+A+R +G E + ++NPF +M E+I L+ + NFFE +V EYQ+
Sbjct: 264 ADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFFEKKVGEYQKAGV 321
Query: 122 LK 123
+
Sbjct: 322 MS 323
>gi|74207686|dbj|BAE40088.1| unnamed protein product [Mus musculus]
Length = 390
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +Q+ R ++ A +E + E +P +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMN 317
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375
Query: 122 LK 123
+
Sbjct: 376 MS 377
>gi|190896536|gb|ACE96781.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896560|gb|ACE96793.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896566|gb|ACE96796.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRKKLSE-------ERVKGIVKDAVDIEREFVVDALPCALVGMN 170
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEY 223
>gi|224048725|ref|XP_002196356.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Taeniopygia
guttata]
Length = 390
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +++ + ++ A L+E + E +P +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLIHKPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 317
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375
Query: 122 LK 123
+
Sbjct: 376 MS 377
>gi|322709430|gb|EFZ01006.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
anisopliae ARSEF 23]
Length = 414
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + +Q ++ +A +E + E +P +G+N
Sbjct: 276 RDEGLHTDFACLL-------HSHLKNRASKQVIYDIITDAVAIEQEFLTEALPCALLGMN 328
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +QY++F+A+R +G E ++K T NPF +M E I L + NFFE RV +YQ+
Sbjct: 329 SNLMKQYIEFVADRLLVALGNEKVYK-TSNPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 386
Query: 122 L 122
L
Sbjct: 387 L 387
>gi|190896512|gb|ACE96769.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896530|gb|ACE96778.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRKKLSE-------ERVKGIVKDAVDIEREFVVDALPCALVGMN 170
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEY 223
>gi|73979721|ref|XP_540076.2| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain
(Ribonucleotide reductase small chain) isoform 1 [Canis
familiaris]
Length = 394
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N
Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFLTEALPVKLIGMN 321
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 322 CTLMKQYIEFVADRLMLELGFSKVF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 379
Query: 122 LK 123
+
Sbjct: 380 MS 381
>gi|219110949|ref|XP_002177226.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411761|gb|EEC51689.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 409
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + ++++ + ++ EA +E + + +P G +G+N
Sbjct: 278 RDEGLHCSFACQLYSKLERKLSE-------TDMHKLIGEAVEVEKGFVCDALPVGLIGMN 330
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R H +G L+ ++NPF WM +I L+ + NFFE RV EYQ+
Sbjct: 331 ASLMSQYVEFVADRLLHDLGYRTLYG-SKNPFDWMD-MISLEGKTNFFEKRVGEYQKSGV 388
Query: 122 L 122
+
Sbjct: 389 M 389
>gi|327261309|ref|XP_003215473.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Anolis carolinensis]
Length = 394
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +++ R ++ A +E + E +P +G+N
Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFLTEALPVNLIGMN 321
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 322 CTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 379
Query: 122 LK 123
+
Sbjct: 380 MS 381
>gi|255079598|ref|XP_002503379.1| predicted protein [Micromonas sp. RCC299]
gi|226518645|gb|ACO64637.1| predicted protein [Micromonas sp. RCC299]
Length = 335
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + I + R ++ EA +E + + +P VG+N
Sbjct: 208 RDEGLHRDFACLLYSYINKKPNE-------SVVRQIVKEAVEIEKEFVCDALPCALVGMN 260
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +Y++F+A+ Q+G+ + NPF WM E+I L+ + NFFE RV EYQ+
Sbjct: 261 ADLMSEYIEFVADHLLGQLGMSKEYNAA-NPFDWM-ELISLQGKTNFFEKRVGEYQKSGV 318
Query: 122 LK 123
+
Sbjct: 319 MN 320
>gi|331245491|ref|XP_003335382.1| ribonucleoside-diphosphate reductase subunit M2 [Puccinia graminis
f. sp. tritici CRL 75-36-700-3]
gi|309314372|gb|EFP90963.1| ribonucleoside-diphosphate reductase subunit M2 [Puccinia graminis
f. sp. tritici CRL 75-36-700-3]
Length = 380
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL + + ++ +A +E + + +P +G+N
Sbjct: 243 RDEGLHTDFACLLF-------THLERRPHPDTVQAIIAQAVEIEKEFLSDALPCKLIGMN 295
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G E + NPF +M E+I L + NFFE RV++Y +
Sbjct: 296 ADLMCQYIEFVADRLLVALGNEKFYN-ATNPFDFM-EMISLSGKTNFFEKRVSDYAKAGV 353
Query: 122 LK 123
+
Sbjct: 354 MT 355
>gi|115387427|ref|XP_001211219.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
terreus NIH2624]
gi|114195303|gb|EAU37003.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
terreus NIH2624]
Length = 401
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + +Q ++ EA +E + + +P +G+N
Sbjct: 267 RDEGLHTDFACLLFS-------HLNNRPSKQVVEDIIVEAVAIEKEFLTDALPVALLGMN 319
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G F ++ NPF +M I L + NFFE RV +YQ+
Sbjct: 320 SKLMCQYIEFVADRLLVALGNNKYF-HSTNPFDFMES-ISLAGKTNFFEKRVGDYQKAGV 377
Query: 122 L 122
+
Sbjct: 378 M 378
>gi|77748199|gb|AAI06683.1| MGC78958 protein [Xenopus laevis]
Length = 406
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + H+ K +Q+ R ++ +A +E + E +P +G+N
Sbjct: 281 RDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFLIEALPVELIGMN 333
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G + +FK +ENPF +M E I L+ + NFFE +V EYQ+
Sbjct: 334 CTLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFFEKKVGEYQKMGV 391
Query: 122 L 122
+
Sbjct: 392 M 392
>gi|313675915|ref|YP_004053911.1| ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
gi|312942613|gb|ADR21803.1| Ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
Length = 331
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N HL K ++K ++ +A +E + +++P +G+N
Sbjct: 202 RDEGLHCDFACLLYN------DHLVNKLSKEKVTAIITDAVEIEKEFVTDSLPVKLIGMN 255
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R ++ + ++ + NPF +M E+I L+ + NFFE RV +YQ+
Sbjct: 256 ADLMCQYIEFVADRLLQELRCDKVYG-SSNPFDFM-EMISLQGKTNFFEKRVGDYQKAGV 313
Query: 122 LK 123
+K
Sbjct: 314 MK 315
>gi|91081999|ref|XP_969259.1| PREDICTED: similar to AGAP006818-PA [Tribolium castaneum]
gi|270007377|gb|EFA03825.1| hypothetical protein TcasGA2_TC013940 [Tribolium castaneum]
Length = 374
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 68/120 (56%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL K +++ ++++ +A +E + E +P +G+N
Sbjct: 250 RDEGLHCDFACLMFS-------HLVQKPSKERIQSIIQDAVKIEKEFLTEALPVSMIGMN 302
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G E ++ ++NPF +M+ +I + + NFFE +V EYQ+
Sbjct: 303 CALMCQYIEFVADRLLGELGCEKIYN-SQNPFDFMT-IISNEGKTNFFEKKVGEYQKSGV 360
>gi|72008642|ref|XP_780110.1| PREDICTED: similar to ribonucleotide reductase protein R2 class I
isoform 1 [Strongylocentrotus purpuratus]
gi|115928579|ref|XP_001179668.1| PREDICTED: similar to ribonucleotide reductase protein R2 class I
[Strongylocentrotus purpuratus]
Length = 412
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K ++ + ++ EA +E + + +P +G+N
Sbjct: 282 RDEGLHCDFACLMFK-------HLNNKPDEEHVQGIIKEAVAIEQEFLTDALPCSLIGMN 334
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A ++Y++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 335 AVLMKRYIEFVADRLLVELGCGKIWKV-ENPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 392
Query: 122 LK 123
+
Sbjct: 393 MS 394
>gi|294950175|ref|XP_002786498.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239900790|gb|EER18294.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 350
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 8/121 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N +K +T+ ++ ++ A +E + E++P +G+N
Sbjct: 208 RDEGLHADFACLLYNMLK------YTRLPDERVHEIVRGAVEVERVFISESLPVSLIGMN 261
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +Y++F+A+R +G L+ NPF WM ++I L+ + NFFE RV EYQ+G
Sbjct: 262 SQLMCRYIEFVADRLLVALGHPKLYN-ATNPFDWM-KMISLQGKTNFFEKRVGEYQKGGV 319
Query: 122 L 122
+
Sbjct: 320 M 320
>gi|169613737|ref|XP_001800285.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
gi|111061216|gb|EAT82336.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
Length = 409
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + + T+ + + ++ EA +E + E +P +G+N
Sbjct: 267 RDEGMHTDFACLLFSLL-------NTRPSKDAVKAIITEAVEIEQEFLTEALPCALLGMN 319
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G ++ NPF +M E I L + NFFE RV +YQ+
Sbjct: 320 STLMCQYIEFVADRLLLALGNTKVYN-ATNPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 377
Query: 122 L 122
+
Sbjct: 378 M 378
>gi|190896528|gb|ACE96777.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRKKLSE-------ERVKGIVKDAVDIEREFVVDALPCALVGMN 170
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEY 223
>gi|71416121|ref|XP_810103.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
strain CL Brener]
gi|70874586|gb|EAN88252.1| ribonucleoside-diphosphate reductase small chain, putative
[Trypanosoma cruzi]
Length = 337
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + ++ K ++ R ++ A +E + +++P +G+N
Sbjct: 210 RDEGLHTDFACLLY------ENYIVNKLPTERIREIICSAVDIEREFICDSIPVRLLGMN 263
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A Y++F+A+R +G E + ++NPF +M E+I L+ + NFFE +V EYQ+
Sbjct: 264 ADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFFEKKVGEYQKAGV 321
Query: 122 LK 123
+
Sbjct: 322 MS 323
>gi|302783485|ref|XP_002973515.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
gi|302787555|ref|XP_002975547.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
gi|300156548|gb|EFJ23176.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
gi|300158553|gb|EFJ25175.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
Length = 347
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + ++ ++ + ++ +A +E + E + VG+N
Sbjct: 217 RDEGLHCDFACLLYSLLNVKLDE-------KRVKEIVSDAVEIERQFVCEALSCDLVGMN 269
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY+ F+A+R +G LF NPF WM +I L+ + NFFE RV EYQ+ +
Sbjct: 270 ARLMSQYIDFVADRLMVVLGYNKLFN-AINPFDWMD-LISLQGKTNFFEKRVGEYQKASV 327
Query: 122 L 122
+
Sbjct: 328 M 328
>gi|311748425|ref|ZP_07722210.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
sp. PR1]
gi|126576938|gb|EAZ81186.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
sp. PR1]
Length = 326
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + H+ ++ R ++ +A +E + + +P +G+N
Sbjct: 196 RDEGLHCDFACHLYTK------HVVNPLPKETVREIIIDAVKIEKEFVTDALPVRLIGMN 249
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R ++ E ++ + NPF +M +I L+ + NFFE RV +YQ+
Sbjct: 250 SDLMCQYIEFVADRLLLELDCEKVWN-STNPFDFMD-MISLQGKTNFFEKRVGDYQKAGV 307
Query: 122 LK 123
+K
Sbjct: 308 MK 309
>gi|190896524|gb|ACE96775.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896534|gb|ACE96780.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRKKLSE-------ERVKGIVKDAVDIEREFVVDALPCALVGMN 170
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEY 223
>gi|327261311|ref|XP_003215474.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 2 [Anolis carolinensis]
Length = 390
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +++ R ++ A +E + E +P +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFLTEALPVNLIGMN 317
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375
Query: 122 LK 123
+
Sbjct: 376 MS 377
>gi|148230557|ref|NP_001080772.1| ribonucleotide reductase M2 polypeptide [Xenopus laevis]
gi|28839018|gb|AAH47975.1| Rrm2-prov protein [Xenopus laevis]
Length = 386
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +++ ++ A +E + E +P +G+N
Sbjct: 261 RDEGLHCDFACLMFR-------HLVHKPSEERVVQLITNAVQIEQEFLTEALPVNLIGMN 313
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +FK NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 314 CTLMKQYIEFVADRLLLELGFNKVFK-ASNPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 371
Query: 122 LK 123
+
Sbjct: 372 MS 373
>gi|171687074|ref|XP_001908478.1| hypothetical protein [Podospora anserina S mat+]
gi|170943498|emb|CAP69151.1| unnamed protein product [Podospora anserina S mat+]
Length = 409
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + +Q ++ +A +E + E +P +G+N
Sbjct: 271 RDEGLHTDFACLLFS-------HLNNRPSKQLVEDIIRDAVTIEQEFLTEALPCALLGMN 323
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +QY++F+A+R +G + ++ + NPF +M E I L + NFFE RV EYQ+
Sbjct: 324 SNLMKQYIEFVADRLLVALGNDKIY-RSTNPFDFM-ENISLGGKTNFFEKRVGEYQKAGV 381
Query: 122 LK 123
+
Sbjct: 382 MN 383
>gi|56118690|ref|NP_001007890.1| ribonucleotide reductase M2, gene 2 [Xenopus (Silurana) tropicalis]
gi|51258920|gb|AAH80161.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
tropicalis]
Length = 386
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +++ ++ +A +E + E +P +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HLVNKPSEERVVQLITDAVQIEQEFLTEALPVNLIGMN 313
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +FK NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 314 CTLMKQYIEFVADRLLLELGFNKVFK-ATNPFDFM-ENISLEGKTNFFEKKVGEYQKMGV 371
Query: 122 LK 123
+
Sbjct: 372 MS 373
>gi|38229183|ref|NP_938276.1| 20L [Yaba monkey tumor virus]
gi|38000454|gb|AAR07377.1| 20L [Yaba monkey tumor virus]
Length = 325
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL + R ++ EA +E + E MP +G+N
Sbjct: 200 RDEGLHCDFACMMFK-------HLSNPPLENVIRDIVIEAVDIEKNFLTEAMPVKLIGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G + + ++NPF +M E I L+ + NFFE RV+EYQ+ +
Sbjct: 253 CDLMKQYIEFVADRLLLELGCKK-YYCSKNPFDFM-ENISLEGKTNFFEKRVSEYQKMSV 310
Query: 122 LK 123
+
Sbjct: 311 MS 312
>gi|89268988|emb|CAJ81953.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
tropicalis]
gi|89269815|emb|CAJ81580.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
tropicalis]
Length = 386
Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +++ ++ +A +E + E +P +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HLVNKPSEERVVQLITDAVQIEQEFLTEALPVNLIGMN 313
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +FK NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 314 CTLMKQYIEFVADRLLLELGFNKVFK-ATNPFDFM-ENISLEGKTNFFEKKVGEYQKMGV 371
Query: 122 LK 123
+
Sbjct: 372 MS 373
>gi|190896570|gb|ACE96798.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896582|gb|ACE96804.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRKKLSE-------EQVKGIVKDAVDIEREFVVDALPCALVGMN 170
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNAA-NPFDWM-ELISLQGKTNFFEKRVGEY 223
>gi|149279601|ref|ZP_01885730.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
sp. BAL39]
gi|149229637|gb|EDM35027.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
sp. BAL39]
Length = 324
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F + + +K + + ++ +A +E + + +P +G+N
Sbjct: 197 RDEGSHCEFACLLYSMLKNKLSE-------EHVHGIIRDAVEIEKEFVTDALPVALIGMN 249
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R ++G ++ + NPF +M E+I L+ + NFFE RV +YQ+
Sbjct: 250 AKLMSQYIEFVADRWLQELGYTKIY-HATNPFDFM-EMISLQGKTNFFEKRVGDYQKSGV 307
Query: 122 LK 123
L
Sbjct: 308 LT 309
>gi|164659270|ref|XP_001730759.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
gi|159104657|gb|EDP43545.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
Length = 397
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +K + ++ EA +E + + +P +G+N
Sbjct: 266 RDEGLHTDFACLLFSHLKK-------RAHPDTVNRIITEAVDIEQDFLTDALPVSLIGMN 318
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + + NPF +M E I L+ + NFFE RV +Y +
Sbjct: 319 ARLMCQYIEFVADRLLVALGNPKHYN-STNPFDFM-ENISLQGKSNFFERRVGDYAKAGV 376
Query: 122 LKWD 125
+ D
Sbjct: 377 ARAD 380
>gi|57239055|ref|YP_180191.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
ruminantium str. Welgevonden]
gi|15811135|gb|AAL08816.1|AF308664_1 hypothetical ribonucleoside reductase beta chain [Ehrlichia
ruminantium]
gi|57161134|emb|CAH58047.1| putative ribonucleoside-diphosphate reductase beta chain [Ehrlichia
ruminantium str. Welgevonden]
Length = 324
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH I + N EN +W + +++ LE + + G
Sbjct: 192 VRDETLHTESIIRLFNTFIQENYEIWDDDLKKELYEACSVIVTLEDEFINLAFACGDVEG 251
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L+A ++Y+++IANRR Q+ LEP++ +NP W+ E+++ + NFFE RVTEY +
Sbjct: 252 LSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNFFENRVTEYTRA 311
Query: 120 A-ELKWD 125
A E W+
Sbjct: 312 ATEGTWE 318
>gi|156387377|ref|XP_001634180.1| predicted protein [Nematostella vectensis]
gi|156221260|gb|EDO42117.1| predicted protein [Nematostella vectensis]
Length = 341
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K ++ R ++ +A ++E + +P +G+N
Sbjct: 216 RDEGLHCDFACLMYK-------YLVNKPDEETVRGIIKDAVVIEQEFLTSALPVKLIGMN 268
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R + + ++ ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 269 CALMRQYIEFVADRLLVALNCQKVYNV-ENPFDFM-ENISLEGKTNFFEKRVGEYQKSGV 326
Query: 122 LK 123
+
Sbjct: 327 MS 328
>gi|149637725|ref|XP_001508783.1| PREDICTED: similar to Ribonucleotide reductase M2 B (TP53
inducible) [Ornithorhynchus anatinus]
Length = 401
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K + K + ++ +A +E + E +P G +G+N
Sbjct: 276 RDEGLHCDFACLMFQYLVK-------KPSEDKVKEIIIDAVEIEQEFLTEALPVGLIGMN 328
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F +++NPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 329 CTLMKQYIEFVADRLLVELGFSKVF-HSDNPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 386
Query: 122 LK 123
+
Sbjct: 387 MS 388
>gi|58578998|ref|YP_197210.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
ruminantium str. Welgevonden]
gi|58417624|emb|CAI26828.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia
ruminantium str. Welgevonden]
Length = 329
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH I + N EN +W + +++ LE + + G
Sbjct: 197 VRDETLHTESIIRLFNTFIQENYEIWDDDLKKELYEACSVIVTLEDEFINLAFACGDVEG 256
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L+A ++Y+++IANRR Q+ LEP++ +NP W+ E+++ + NFFE RVTEY +
Sbjct: 257 LSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNFFENRVTEYTRA 316
Query: 120 A-ELKWD 125
A E W+
Sbjct: 317 ATEGTWE 323
>gi|326797773|ref|YP_004315592.1| ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
gi|326548537|gb|ADZ76922.1| Ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
Length = 323
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH F + + ++ + P ++ + ++ +A +E + + +P +G+N
Sbjct: 198 RDEGLHCEFACLLYSMLEAKLPK-------ERVQEIIIDAVEIEKEFITDALPVKLIGMN 250
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +QY++F+A+R ++G + NPF +M E+I L+ + NFFE RV +YQ+
Sbjct: 251 ADLMKQYIEFVADRWLVELGNSKYYN-ATNPFDFM-ELISLQGKTNFFEKRVGDYQKSGV 308
>gi|156058956|ref|XP_001595401.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980]
gi|154701277|gb|EDO01016.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 407
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +K + +Q + ++ EA +E + E +P +G+N
Sbjct: 266 RDEGLHTDFACLLFSHLK-------HRPSKQAVQDVITEAVEIEQEFLTEALPCALLGMN 318
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +QY++F+A+R +G + ++K NPF +M E I L + NFFE RV +YQ+
Sbjct: 319 STLMKQYIEFVADRLLVTLGNDKVYKSA-NPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 376
Query: 122 L 122
+
Sbjct: 377 M 377
>gi|321263777|ref|XP_003196606.1| ribonucleoside-diphosphate reductase [Cryptococcus gattii WM276]
gi|317463083|gb|ADV24819.1| Ribonucleoside-diphosphate reductase, putative [Cryptococcus gattii
WM276]
Length = 401
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + ++ + ++ EA +E + + +P +G+N
Sbjct: 269 RDEGLHTDFACLLFTHLRR-------RPHPDTIARIIKEAVSIEQEFLTDALPVSLIGMN 321
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G E ++ + NPF +M E+I L+ + NFFE+RV+ Y +
Sbjct: 322 AKLMCQYIEFVADRLLVALGNEKIWN-STNPFDFM-EMISLQGKANFFESRVSAYSKSGV 379
>gi|149728153|ref|XP_001502384.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit
M2 (Ribonucleotide reductase small subunit)
(Ribonucleotide reductase small chain) [Equus caballus]
Length = 425
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N
Sbjct: 300 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFLTEALPVRLIGMN 352
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 353 CALMKQYIEFVADRLLLELGFNKVF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 410
Query: 122 LK 123
+
Sbjct: 411 MS 412
>gi|71043760|ref|NP_001020911.1| ribonucleoside-diphosphate reductase subunit M2 [Rattus norvegicus]
gi|77416595|sp|Q4KLN6|RIR2_RAT RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|68533806|gb|AAH99082.1| Ribonucleotide reductase M2 [Rattus norvegicus]
gi|149051013|gb|EDM03186.1| rCG61374 [Rattus norvegicus]
Length = 390
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +Q+ + ++ + +E + E +P +G+N
Sbjct: 265 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIITNSVRIEQEFLTEALPVKLIGMN 317
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +FK ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 318 CTLMKQYIEFVADRLMLELGFNKIFKV-ENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 375
Query: 122 LK 123
+
Sbjct: 376 MS 377
>gi|330814259|ref|YP_004358498.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
[Candidatus Pelagibacter sp. IMCC9063]
gi|327487354|gb|AEA81759.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
[Candidatus Pelagibacter sp. IMCC9063]
Length = 345
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 2/126 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH N I + N ENP L +++ E A+ G
Sbjct: 212 VRDETLHCNSMIKIFNTFCDENPGLLDDSLKKEIYEACSTIIEHEDAFIDLAFEMGDIEG 271
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A ++Y+++IANRR Q+ L L++ ENP W+ ++++ + NFFE R TEY +
Sbjct: 272 LKAEEVKKYIRWIANRRLAQLRLNDLYEVKENPLTWLDDMLNGVEHMNFFEGRATEYSKA 331
Query: 120 AE-LKW 124
+ W
Sbjct: 332 STKGSW 337
>gi|322499081|emb|CBZ34153.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 269
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 5 SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPS 64
LH +F + N H+ K +++ ++ +A +E + + +P +G+NA
Sbjct: 145 GLHTDFACLLYN------SHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMNAEL 198
Query: 65 CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELK 123
QY++F+A+R +G E + + PF +M E+I L+ + NFFE +V EYQ+ +
Sbjct: 199 MAQYIEFVADRLLVSLGEEKHY-RSTQPFDFM-EMISLQGKTNFFEKKVGEYQKAGVMS 255
>gi|328771482|gb|EGF81522.1| hypothetical protein BATDEDRAFT_16297 [Batrachochytrium
dendrobatidis JAM81]
Length = 336
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K + ++HEA +E ++ E++P +G+N
Sbjct: 210 RDEGLHTDFACLLFTLL-------NNKPTDSVIQQIIHEAVTIEQEFSTESLPVALIGMN 262
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +QY++F+A+R ++G+ + NPF +M +I L+ + NFFE RV EYQ+
Sbjct: 263 ANLMKQYIEFVADRLFIELGMPKKYGVG-NPFDFMD-MISLQGKTNFFEKRVGEYQKSGV 320
Query: 122 LK 123
+
Sbjct: 321 MN 322
>gi|312216546|emb|CBX96496.1| similar to ribonucleoside-diphosphate reductase subunit M2
[Leptosphaeria maculans]
Length = 410
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + + T+ ++ + ++ EA +E + + +P +G+N
Sbjct: 266 RDEGMHTDFACLLFSLL-------NTRPSKESVQAIITEAVEIEKEFLSDALPCALLGMN 318
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + NPF +M E I L + NFFE RV +YQ+
Sbjct: 319 ATLMCQYIEFVADRLLLSLGNTKFYN-ATNPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 376
Query: 122 L 122
+
Sbjct: 377 M 377
>gi|158286793|ref|XP_308927.4| AGAP006818-PA [Anopheles gambiae str. PEST]
gi|157020637|gb|EAA04227.4| AGAP006818-PA [Anopheles gambiae str. PEST]
Length = 400
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 67/121 (55%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K +++ ++ +A L+E + + +P +G+N
Sbjct: 275 RDEGLHCDFACLMFKYLVQ-------KPSKERVTEIIRDAVLIEQEFLTKALPVDMLGMN 327
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G E ++ +T+NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 328 CDLMSQYIEFVADRLLLELGCEKIY-HTKNPFSFM-EFISLEGKTNFFEKKVGEYQKWGV 385
Query: 122 L 122
+
Sbjct: 386 M 386
>gi|294890631|ref|XP_002773236.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239878288|gb|EER05052.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 350
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 8/121 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N + +T+ ++ ++ A +E + E++P +G+N
Sbjct: 208 RDEGLHADFACLLYNMMH------YTRLPDERVHEIVRGAVDVERVFISESLPVSLIGMN 261
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +Y++F+A+R +G L+ NPF WM ++I L+ + NFFE RV EYQ+G
Sbjct: 262 SQLMCRYIEFVADRLLVALGHPKLYN-ATNPFDWM-KMISLQGKTNFFEKRVGEYQKGGV 319
Query: 122 L 122
+
Sbjct: 320 M 320
>gi|241951066|ref|XP_002418255.1| ribonucleoside-diphosphate reductase small chain 1, putative;
ribonucleotide reductase r2 subunit 1, putative;
ribonucleotide reductase small subunit 1, putative
[Candida dubliniensis CD36]
gi|223641594|emb|CAX43555.1| ribonucleoside-diphosphate reductase small chain 1, putative
[Candida dubliniensis CD36]
Length = 413
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL + + ++ EA +E Y + +P +G+N
Sbjct: 285 RDEGLHTDFACLLF-------AHLQNRPSPEIVEKIITEAVDVEKEYFTDALPVSLLGMN 337
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G + ++ T NPF +M E I L + NFFE RV++YQ+
Sbjct: 338 CNLMCQYIEFVADRLLLALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 395
Query: 122 L 122
+
Sbjct: 396 M 396
>gi|190896572|gb|ACE96799.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896574|gb|ACE96800.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896576|gb|ACE96801.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896578|gb|ACE96802.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRKKLSE-------EQVKGIVKDAVDIEREFVVDALPCALVGMN 170
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFFEKRVGEY 223
>gi|190896568|gb|ACE96797.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896580|gb|ACE96803.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRKKLSE-------EQVKGIVKDAVDIEREFVVDALPCALVGMN 170
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
QY++F+A+R +G ++ NPF WM E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNAA-NPFDWM-ELISLQGKTNFFEKRVGEY 223
>gi|46446983|ref|YP_008348.1| ribonucleoside-diphosphate reductase small chain [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400624|emb|CAF24073.1| probable ribonucleoside-diphosphate reductase small chain
[Candidatus Protochlamydia amoebophila UWE25]
Length = 323
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +Q+ + P + + ++ A +E + + +P +G+N
Sbjct: 198 RDEGLHCDFACLLYSQLNNKLP-------LETLQAIISHAVAIEKEFVQDALPVRLIGMN 250
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G L+ +NPF +M +I + + NFFE RV+EYQ+
Sbjct: 251 ATLMCQYIEFVADRLLVALGSPKLYNV-DNPFDFMD-LISMPGKTNFFERRVSEYQKSGV 308
Query: 122 LK 123
+
Sbjct: 309 MS 310
>gi|322693757|gb|EFY85606.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
acridum CQMa 102]
Length = 411
Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + +Q ++ +A +E + E +P +G+N
Sbjct: 273 RDEGLHTDFACLL-------HSHLKNRASKQIIHDIITDAVAIEKEFLTEALPCALLGMN 325
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +QY++F+A+R +G E ++K T NPF +M E I L + NFFE RV +YQ+
Sbjct: 326 SNLMKQYIEFVADRLLVALGNEKVYK-TSNPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 383
Query: 122 L 122
L
Sbjct: 384 L 384
>gi|294659365|ref|XP_461732.2| DEHA2G04268p [Debaryomyces hansenii CBS767]
gi|199433907|emb|CAG90185.2| DEHA2G04268p [Debaryomyces hansenii]
Length = 426
Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + ++ EA +E + + +P +G+N
Sbjct: 297 RDEGLHTDFACLLFS-------HLQNRPDAVIVERIITEAVTIEKEFFVDALPISLLGMN 349
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G + ++ T NPF +M E I L + NFFE RV++YQ+
Sbjct: 350 CNLMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 407
Query: 122 L 122
+
Sbjct: 408 M 408
>gi|313213932|emb|CBY40745.1| unnamed protein product [Oikopleura dioica]
Length = 418
Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + H+ K Q++ ++ +A +E + + +P +G+N
Sbjct: 287 RDEGLHTDFACLMYK-------HMVQKPSQEQIIAIIRDAVSIEQEFLTDALPVRLIGMN 339
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++ ++K ENPF +M E+I L+ + NFFE +V+EY +
Sbjct: 340 CDLMKTYIEFVADRLLVELDCPKIYKV-ENPFDFM-EMISLEGKTNFFEKKVSEYARAGV 397
Query: 122 L 122
+
Sbjct: 398 M 398
>gi|168049349|ref|XP_001777126.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671569|gb|EDQ58119.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 325
Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K + + ++ EA +E + E + VG+N
Sbjct: 197 RDEGLHCDFACLLYTLL-------NNKLSEDRVHEIVCEAVDIEREFVCEALSCDLVGMN 249
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+Y+ F+A+R +G + NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 250 KIMMSEYIDFVADRLLVSLGYNKRYN-ARNPFDWM-ELISLQGKTNFFEKRVGEYQKASV 307
Query: 122 LK 123
+
Sbjct: 308 MS 309
>gi|39977011|ref|XP_369893.1| hypothetical protein MGG_06408 [Magnaporthe oryzae 70-15]
gi|145016179|gb|EDK00669.1| hypothetical protein MGG_06408 [Magnaporthe oryzae 70-15]
Length = 403
Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + + ++ + ++ +A +E + E +P +G+N
Sbjct: 260 RDEGLHTDFACLLFSLL-------NNRPNKEVVKEIVVDAVKIEQEFLTEALPCALLGMN 312
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +QY++F+A+R +G E ++ NPF +M E I L + NFFE RV EYQ+
Sbjct: 313 ANLMKQYIEFVADRLLVALGNEKVY-RATNPFDFM-ENISLGGKTNFFEKRVGEYQKAGV 370
Query: 122 L 122
+
Sbjct: 371 M 371
>gi|18859327|ref|NP_571525.1| ribonucleoside-diphosphate reductase subunit M2 [Danio rerio]
gi|292624782|ref|XP_002665783.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Danio rerio]
gi|3914657|sp|P79733|RIR2_DANRE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase protein R2 class
I; AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|1695831|gb|AAB37103.1| ribonucleotide reductase protein R2 class I [Danio rerio]
gi|27881838|gb|AAH44355.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
gi|56207929|emb|CAI21240.1| ribonucleotide reductase M2 polypeptide [Danio rerio]
gi|182889152|gb|AAI64707.1| Rrm2 protein [Danio rerio]
Length = 386
Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K ++ + ++ A +E + + +P +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HLINKPSEETVKKIIMNAVEIEQEFLTDALPVKLIGMN 313
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G + ++ ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 314 CDLMKQYIEFVADRLLLELGFDKVY-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 371
Query: 122 LK 123
+
Sbjct: 372 MS 373
>gi|58617056|ref|YP_196255.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
ruminantium str. Gardel]
gi|58416668|emb|CAI27781.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia
ruminantium str. Gardel]
Length = 329
Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH I + N EN +W + +++ LE + + G
Sbjct: 197 VRDETLHTESIIRLFNTFIQENYEIWDGDLKKELYEACSVIVTLEDEFINLAFACGDVEG 256
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L+A ++Y+++IANRR Q+ LEP++ +NP W+ E+++ + NFFE RVTEY +
Sbjct: 257 LSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNFFENRVTEYTRA 316
Query: 120 A-ELKWD 125
A E W+
Sbjct: 317 ATEGTWE 323
>gi|213511642|ref|NP_001133495.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
gi|209154228|gb|ACI33346.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
Length = 387
Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K ++ ++ A +E + + +P +G+N
Sbjct: 262 RDEGLHCDFACLMFK-------HLVHKPSKETVTKLIRNAVEIEQEFLTKALPVKLIGMN 314
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G + ++ ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 315 CDLMTQYIEFVADRLMLELGFDKIY-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 372
Query: 122 LK 123
+
Sbjct: 373 MS 374
>gi|157126966|ref|XP_001654749.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti]
gi|15638625|gb|AAL05057.1|AF411297_1 ribonucleotide reductase 2 [Aedes aegypti]
gi|82469974|gb|ABB77235.1| ribonucleotide reductase small subunit R2 [Aedes aegypti]
gi|108873070|gb|EAT37295.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti]
Length = 397
Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 67/121 (55%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K Q++ ++ EA L+E + + +P +G+N
Sbjct: 272 RDEGLHTDFACLMFKYLVQ-------KPSQERVIEIIREAVLIEQEFLTKALPVDLLGMN 324
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G++ ++ T+NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 325 CDLMSQYIEFVADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQKWGV 382
Query: 122 L 122
+
Sbjct: 383 M 383
>gi|20809684|gb|AAH28932.1| Similar to ribonucleotide reductase protein r2 class I [Homo
sapiens]
Length = 172
Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +++ R ++ A +E + E +P +G+N
Sbjct: 47 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 99
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 100 CTLMKQYIEFVADRLMLELGFSKVF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 157
Query: 122 LK 123
+
Sbjct: 158 MS 159
>gi|325953830|ref|YP_004237490.1| ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
gi|323436448|gb|ADX66912.1| Ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
Length = 323
Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
Query: 2 RDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
RDE LH +F + N +K + P + + ++ +A +E + E +P +G+
Sbjct: 196 RDEGLHCDFACLLYVNHLKNKLPE-------ETVQKIIADAVEVEKEFVTEALPVRLIGM 248
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA QY++F+A+R +G + ++ NPF +M E+I L+ + NFFE RV EYQ+
Sbjct: 249 NAELMCQYIEFVADRLLDALGCKKVWN-ATNPFDFM-ELISLQGKTNFFERRVGEYQKSG 306
Query: 121 E 121
Sbjct: 307 V 307
>gi|148234092|ref|NP_001079369.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus laevis]
gi|27371032|gb|AAH41209.1| MGC52676 protein [Xenopus laevis]
Length = 386
Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K +++ ++ +A +E + E +P +G+N
Sbjct: 261 RDEGLHCDFACLMFKHLIR-------KPSEERVVELITDAVQIEQEFLTEALPVNLIGMN 313
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G + +FK NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 314 CTLMKQYIEFVADRLLLELGFKKVFK-ATNPFDFM-ENISLEGKTNFFEKKVGEYQKMGV 371
Query: 122 LK 123
+
Sbjct: 372 MS 373
>gi|58260896|ref|XP_567858.1| ribonucleoside-diphosphate reductase [Cryptococcus neoformans var.
neoformans JEC21]
gi|134116993|ref|XP_772723.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255341|gb|EAL18076.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229939|gb|AAW46341.1| ribonucleoside-diphosphate reductase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 401
Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + ++ + ++ EA +E + + +P +G+N
Sbjct: 269 RDEGLHTDFACLLFTHLRR-------RPHPDTIARIIKEAVTIEQEFLTDALPVSLIGMN 321
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G E ++ + NPF +M E+I L+ + NFFE+RV+ Y +
Sbjct: 322 AKLMCQYIEFVADRLLVAMGNEKIWN-STNPFDFM-EMISLQGKANFFESRVSAYSKSGV 379
>gi|38232564|gb|AAR15079.1| ribonucleotide reductase R2 subunit variant [Aedes albopictus]
Length = 219
Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 67/121 (55%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K Q++ ++ EA L+E + + +P +G+N
Sbjct: 94 RDEGLHTDFACLMFKYLVQ-------KPSQERVIEIIREAVLIEQEFLTKALPVDLLGMN 146
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G++ ++ T+NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 147 CELMSQYIEFVADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQKWGV 204
Query: 122 L 122
+
Sbjct: 205 M 205
>gi|68481406|ref|XP_715342.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
gi|68481537|ref|XP_715277.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
gi|46436893|gb|EAK96248.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
gi|46436961|gb|EAK96315.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
gi|238882096|gb|EEQ45734.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
albicans WO-1]
Length = 413
Score = 120 bits (300), Expect = 8e-26, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL + + ++ EA +E Y + +P +G+N
Sbjct: 285 RDEGLHTDFACLLF-------AHLQNRPSPEIVERIITEAVDVEKEYFTDALPVSLLGMN 337
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G + ++ T NPF +M E I L + NFFE RV++YQ+
Sbjct: 338 CNLMCQYIEFVADRLLLALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 395
Query: 122 L 122
+
Sbjct: 396 M 396
>gi|313235850|emb|CBY19835.1| unnamed protein product [Oikopleura dioica]
Length = 382
Score = 120 bits (300), Expect = 8e-26, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + H+ K Q++ ++ +A +E + + +P +G+N
Sbjct: 251 RDEGLHTDFACLMYK-------HMVQKPSQEQIIAIIRDAVSIEQEFLTDALPVRLIGMN 303
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++ ++K ENPF +M E+I L+ + NFFE +V+EY +
Sbjct: 304 CDLMKTYIEFVADRLLVELDCPKIYKV-ENPFDFM-EMISLEGKTNFFEKKVSEYARAGV 361
Query: 122 L 122
+
Sbjct: 362 M 362
>gi|114799612|ref|YP_759103.1| ribonucleotide-diphosphate reductase subunit beta [Hyphomonas
neptunium ATCC 15444]
gi|114739786|gb|ABI77911.1| ribonucleoside-diphosphate reductase, beta subunit [Hyphomonas
neptunium ATCC 15444]
Length = 345
Score = 120 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDESLH I + + E + T E +++ R LE + G
Sbjct: 197 IRDESLHCEGMIKLFHSFCAETG-VMTDELRERIRDCCRTVVALEDKFIELAFEMGPVEG 255
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ A + Y+++IA+ R +Q+ LEP++ T++P PW++E+++ + NFFE R TEY +G
Sbjct: 256 MTADDIKNYIRYIADWRLNQLKLEPIYGVTKHPIPWLTEILNGVEHANFFEQRSTEYSKG 315
Query: 120 AE-LKW 124
A W
Sbjct: 316 ATKGDW 321
>gi|12085003|ref|NP_073405.1| 20L protein [Yaba-like disease virus]
gi|56404692|sp|Q9DHU2|RIR2_YLDV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|12056179|emb|CAC21258.1| 20L protein [Yaba-like disease virus]
Length = 325
Score = 120 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL R ++ EA +E + E +P +G+N
Sbjct: 200 RDEGLHCDFACIMFK-------HLLNPPLNSVVRDIIIEAVNIEKNFLTEAIPVKLIGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G + + ++NPF +M E I L+ + NFFE RV+EYQ+ +
Sbjct: 253 CDLMKQYIEFVADRLLLELGCDK-YYCSKNPFDFM-ENISLEGKTNFFEKRVSEYQKMSV 310
Query: 122 LK 123
+
Sbjct: 311 MS 312
>gi|170032272|ref|XP_001844006.1| ribonucleoside-diphosphate reductase small chain [Culex
quinquefasciatus]
gi|167872122|gb|EDS35505.1| ribonucleoside-diphosphate reductase small chain [Culex
quinquefasciatus]
Length = 391
Score = 120 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K +++ ++ EA ++E + + +P +G+N
Sbjct: 266 RDEGLHTDFACLMFRYLVQ-------KPSKERVLEIIREAVVIEQEFLTKALPVDLLGMN 318
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G E ++ T+NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 319 CELMSQYIEFVADRLLLELGNEKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQKWGV 376
Query: 122 L 122
+
Sbjct: 377 M 377
>gi|320580024|gb|EFW94247.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
complex [Pichia angusta DL-1]
Length = 408
Score = 120 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL ++ EA +E Y + +P +G+N
Sbjct: 277 RDEGLHTDFACLLFS-------HLNNTPNNDIVLKIITEAVDIEKRYFTDALPVNLLGMN 329
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G + + NPF +M E I L + NFFE RV++YQ+
Sbjct: 330 CSLMCQYVEFVADRLLLSLGCKKHYN-ATNPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 387
Query: 122 L 122
+
Sbjct: 388 M 388
>gi|330941350|gb|EGH44202.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. pisi str. 1704B]
Length = 109
Score = 120 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 66/109 (60%), Positives = 82/109 (75%)
Query: 17 QIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRR 76
QIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+NA E Y++FIANRR
Sbjct: 1 QIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRR 60
Query: 77 CHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELKWD 125
QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G L WD
Sbjct: 61 LSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGGALSWD 109
>gi|154296564|ref|XP_001548712.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana
B05.10]
gi|150843273|gb|EDN18466.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana
B05.10]
Length = 407
Score = 120 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +K + +Q + ++ EA +E + E +P +G+N
Sbjct: 266 RDEGLHTDFACLLFSHLK-------HRPSKQAVQDVITEAVEIEQEFLTEALPCALLGMN 318
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +QY++F+A+R +G + +K NPF +M E I L + NFFE RV +YQ+
Sbjct: 319 SNLMKQYIEFVADRLLLSLGNDKYYKSA-NPFDFM-ENISLAGKTNFFEKRVGDYQKAGV 376
Query: 122 L 122
+
Sbjct: 377 M 377
>gi|312130971|ref|YP_003998311.1| ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
17132]
gi|311907517|gb|ADQ17958.1| Ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
17132]
Length = 328
Score = 120 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + K +++ T++ +A +E + + +P +G+N
Sbjct: 202 RDEGLHRDFACLLYTKY------IVNKLPEEQVYTIIKDAVEIEKEFVSDALPVSLIGMN 255
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
AP QY++F+A+ + L+ ++ NPF +M +I L+ + NFFE RV EYQ+
Sbjct: 256 APQMCQYIEFVADHLLESLNLKKVYN-ATNPFDFMD-LISLQGKTNFFEKRVGEYQKAGV 313
Query: 122 LKW 124
Sbjct: 314 TAD 316
>gi|49899161|gb|AAH75746.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
Length = 386
Score = 120 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL +K ++ + ++ A +E + + +P +G+N
Sbjct: 261 RDEGLHCDFACLMFK-------HLISKPSEETVKKIIMNAVEIEQEFLTDALPVKLIGMN 313
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G + ++ ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 314 CDLMKQYIEFVADRLLLELGFDKVY-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 371
Query: 122 LK 123
+
Sbjct: 372 MS 373
>gi|73852496|ref|YP_293780.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
virus 86]
gi|72415212|emb|CAI65449.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
virus 86]
Length = 325
Score = 120 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + H+ K + ++ A LE + E +P +G+N
Sbjct: 196 RDEGLHTDFACMLYRN------HIIHKLPYETVLDIITNAVELERLFICEALPVSLIGIN 249
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A S Y++F+A+R +G + NPF WM E+I L+ + NFFE RV EYQ+
Sbjct: 250 AESMSTYIKFVADRLLISLGYAKHYNVV-NPFEWM-ELISLEGKTNFFEKRVGEYQKAGV 307
Query: 122 LK 123
+
Sbjct: 308 MD 309
>gi|326916502|ref|XP_003204546.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Meleagris gallopavo]
Length = 339
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K +++ + ++ A L+E + E +P +G+N
Sbjct: 214 RDEGLHCDFACLMFKHLIR-------KPSEERVKEIIMNAVLIEQEFLTEALPVKLIGMN 266
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G ++K ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 267 CTLMKQYIEFVADRLMLELGFRKIYKV-ENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 324
Query: 122 LK 123
+
Sbjct: 325 MS 326
>gi|283481249|emb|CAZ69365.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
virus 99B1]
Length = 325
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + H+ K + ++ A LE + E +P +G+N
Sbjct: 196 RDEGLHTDFACMLYRN------HIIHKLPYETVLDIITNAVELERLFICEALPVSLIGIN 249
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A S Y++F+A+R +G + NPF WM E+I L+ + NFFE RV EYQ+
Sbjct: 250 AESMSTYIKFVADRLLISLGYAKHYNVV-NPFEWM-ELISLEGKTNFFEKRVGEYQKAGV 307
Query: 122 LK 123
+
Sbjct: 308 MD 309
>gi|254572986|ref|XP_002493602.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
complex [Pichia pastoris GS115]
gi|238033401|emb|CAY71423.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
complex [Pichia pastoris GS115]
gi|328354568|emb|CCA40965.1| ribonucleoside-diphosphate reductase subunit M2 [Pichia pastoris
CBS 7435]
Length = 400
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + ++ ++ EA +E Y + +P +G+N
Sbjct: 271 RDEGLHTDFACLLFS-------HLNNRASEEIVEKIITEAVEIEKRYFTDALPVSLLGMN 323
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G + ++ NPF +M E I L + NFFE RV++YQ+
Sbjct: 324 CSLMCQYVEFVADRLLVALGNKKVYNV-NNPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381
Query: 122 L 122
+
Sbjct: 382 M 382
>gi|74025548|ref|XP_829340.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei]
gi|70834726|gb|EAN80228.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei]
Length = 337
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + K + + ++ A +E + + +P +G+N
Sbjct: 210 RDEGLHTDFACLLYEKY------IVNKLPRDRVLEIICNAVSIEREFICDALPVRLIGMN 263
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + ++NPF +M +I L+ + NFFE +V EYQ+
Sbjct: 264 SQLMTQYIEFVADRLLVSLGYDRHCN-SKNPFDFMD-MISLQGKTNFFEKKVGEYQKAGV 321
Query: 122 LK 123
+
Sbjct: 322 MS 323
>gi|195333568|ref|XP_002033462.1| GM20395 [Drosophila sechellia]
gi|195582581|ref|XP_002081105.1| GD25870 [Drosophila simulans]
gi|194125432|gb|EDW47475.1| GM20395 [Drosophila sechellia]
gi|194193114|gb|EDX06690.1| GD25870 [Drosophila simulans]
Length = 393
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N
Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+
Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVAEYQRMGV 378
Query: 122 LK 123
+
Sbjct: 379 VS 380
>gi|18079279|ref|NP_525111.1| ribonucleoside diphosphate reductase small subunit [Drosophila
melanogaster]
gi|12644287|sp|P48592|RIR2_DROME RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small subunit
gi|10727628|gb|AAF58599.2| ribonucleoside diphosphate reductase small subunit [Drosophila
melanogaster]
gi|15292183|gb|AAK93360.1| LD41588p [Drosophila melanogaster]
gi|220946286|gb|ACL85686.1| CG8975-PA [synthetic construct]
gi|220955972|gb|ACL90529.1| RnrS-PA [synthetic construct]
Length = 393
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N
Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+
Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVGEYQRMGV 378
Query: 122 LK 123
+
Sbjct: 379 VS 380
>gi|50286273|ref|XP_445565.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524870|emb|CAG58476.1| unnamed protein product [Candida glabrata]
Length = 400
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K + ++ EA +E Y + +P +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLNHKPDPEVVERIVTEAVEIEQRYFLDALPVALLGMN 323
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R G + ++ ENPF +M E I L + NFFE RV++YQ+
Sbjct: 324 AQLMNQYVEFVADRLLVAFGNKKVYNV-ENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381
Query: 122 LK 123
+
Sbjct: 382 MS 383
>gi|330804590|ref|XP_003290276.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
gi|325079602|gb|EGC33194.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
Length = 335
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH NF + ++ K + ++ +A + E + +++P +G+N
Sbjct: 201 RDEGLHCNFACLLYTKLI-------NKLESKTLEAIIRDAVVCEKEFICDSLPVDLIGMN 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ S QY++F A+R +G + ++ NPF WM E+I L+++ NFFE +V EY +
Sbjct: 254 SRSMSQYIEFCADRLLVSLGYKKIYN-ASNPFDWM-EMISLQRKTNFFEGKVAEYAKTGV 311
>gi|4836362|gb|AAD30422.1|AF117061_1 ribonucleotide reductase R2 subunit [Aedes albopictus]
Length = 398
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K Q++ ++ EA L+E + + +P +G+N
Sbjct: 273 RDEGLHTDFACLMFKYLVQ-------KPSQERVIEIIREAVLIEQEFLTKALPVDLLGMN 325
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F A+R ++G++ ++ T+NPF +M E I L+ + NFFE +V EYQ+
Sbjct: 326 CELMSQYIEFEADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFFEKKVGEYQKWGV 383
Query: 122 L 122
+
Sbjct: 384 M 384
>gi|126662515|ref|ZP_01733514.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
bacterium BAL38]
gi|126625894|gb|EAZ96583.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
bacterium BAL38]
Length = 325
Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + + H+ K +++ ++ +A +E + E++P +G+N
Sbjct: 198 RDEGMHCDFAVHLHSH------HIVNKVPKERITEIIVDALNIERQFITESLPVSLIGMN 251
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+ +R ++G + ++ + NPF +M +I L+ + NFFE RV EYQ+
Sbjct: 252 ATLMTQYLEFVTDRLLVELGCDRVYN-SSNPFDFMD-MISLQGKTNFFEKRVAEYQKAGV 309
Query: 122 LKWD 125
+ D
Sbjct: 310 MNSD 313
>gi|163753569|ref|ZP_02160692.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
algicida OT-1]
gi|161325783|gb|EDP97109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
algicida OT-1]
Length = 326
Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + N HL K +++ R ++ +A +E + E++P +G+N
Sbjct: 199 RDEGVHCDFAVHL------HNNHLVNKVPKERIRAIIVDALNIEREFITESLPVSLIGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+ +R ++G E + + NPF +M +I L+ + NFFE RV+EYQ+
Sbjct: 253 AKLMTQYLEFVTDRLLQELGCEKEYNVS-NPFDFMD-MISLQGKTNFFEKRVSEYQKAGV 310
Query: 122 LK 123
L
Sbjct: 311 LN 312
>gi|157939640|ref|YP_001497012.1| ribonucleotide reductase [Tanapox virus]
gi|146746356|gb|ABQ43492.1| ribonucleotide reductase [Tanapox virus]
gi|146746512|gb|ABQ43647.1| ribonucleotide reductase [Tanapox virus]
Length = 325
Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL R ++ EA +E + E +P +G+N
Sbjct: 200 RDEGLHCDFACIMFK-------HLLNPPLNSVVRDIIIEAVNIEKNFLTEAIPVKLIGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G + ++NPF +M E I L+ + NFFE RV+EYQ+ +
Sbjct: 253 CDLMKQYIEFVADRLLLELGCNK-YYCSKNPFDFM-ENISLEGKTNFFEKRVSEYQKMSV 310
Query: 122 LK 123
+
Sbjct: 311 MS 312
>gi|195485577|ref|XP_002091148.1| GE13485 [Drosophila yakuba]
gi|194177249|gb|EDW90860.1| GE13485 [Drosophila yakuba]
Length = 393
Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N
Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+
Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVGEYQRMGV 378
Query: 122 LK 123
+
Sbjct: 379 VS 380
>gi|290977320|ref|XP_002671386.1| predicted protein [Naegleria gruberi]
gi|284084954|gb|EFC38642.1| predicted protein [Naegleria gruberi]
Length = 338
Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 68/122 (55%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +K +TK QQ +++ EA +E + E++P +G+N
Sbjct: 212 RDEGLHTDFACLLYSTLK------FTKLPQQVVHSLVSEAVEIEKEFICESLPVDLIGMN 265
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +QY++ +A+R +G + ++ + NPF WM+ +I + + NFFE +V EY +
Sbjct: 266 SRLMQQYIEMVADRLLVSLGYDKIYN-SPNPFDWMN-IISVSGKTNFFEKKVGEYAKANI 323
Query: 122 LK 123
+
Sbjct: 324 MS 325
>gi|47213105|emb|CAF89525.1| unnamed protein product [Tetraodon nigroviridis]
Length = 198
Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K Q ++ A +E + E +P +G+N
Sbjct: 73 RDEGLHCDFACLMFK-------HLLHKPSAQTVGAIIRNAVEIEQEFLTEALPVKLIGMN 125
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
++Y++F+A+R ++G ++ ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 126 CQLMKRYIEFVADRLLLELGFAKIY-RAENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 183
Query: 122 L 122
+
Sbjct: 184 M 184
>gi|156087150|ref|XP_001610982.1| ribonucleoside-diphosphate reductase small subunit [Babesia bovis
T2Bo]
gi|154798235|gb|EDO07414.1| ribonucleoside-diphosphate reductase small subunit, putative
[Babesia bovis]
Length = 339
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 73/121 (60%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +FG + +++K + P + + ++ EA +E + +++P +G+N
Sbjct: 214 RDEGLHADFGCFIYSKLKHKLP-------AECVQQIIKEAVAVERVFVCDSLPTDLIGMN 266
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G+ P++K T+NPF WM E+I ++ + NFFE RV EYQ+
Sbjct: 267 SMLMAQYIEFVADRLLQALGVPPVYK-TKNPFEWM-ELISVQGKTNFFEKRVGEYQKSGI 324
Query: 122 L 122
L
Sbjct: 325 L 325
>gi|75076588|sp|Q4R741|RIR2B_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
gi|67969468|dbj|BAE01083.1| unnamed protein product [Macaca fascicularis]
Length = 351
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVQIEQEFLTEALPVGLIGMN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CILMKQYIEFVADRLLVELGFSKIF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336
Query: 122 L 122
+
Sbjct: 337 M 337
>gi|41054952|ref|NP_955770.1| ribonucleoside-diphosphate reductase subunit M2 B [Mus musculus]
gi|81885688|sp|Q6PEE3|RIR2B_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
AltName: Full=TP53-inducible ribonucleotide reductase M2
B; AltName: Full=p53-inducible ribonucleotide reductase
small subunit 2-like protein; Short=p53R2
gi|34786000|gb|AAH58103.1| Ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
gi|74218244|dbj|BAE23760.1| unnamed protein product [Mus musculus]
Length = 351
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K + + R ++ +A +E + E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEDRVREIIADAVQIEQEFLTEALPVGLIGMN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CVLMKQYIEFVADRLLGELGFSKIF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336
Query: 122 L 122
+
Sbjct: 337 M 337
>gi|45184688|ref|NP_982406.1| AAL136Cp [Ashbya gossypii ATCC 10895]
gi|44980034|gb|AAS50230.1| AAL136Cp [Ashbya gossypii ATCC 10895]
Length = 422
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K + ++ EA +E Y + +P +G+N
Sbjct: 292 RDEGLHTDFACLLF-------AHLNNKPDTEIVEKIITEAVEIEKRYFQDAIPVALLGMN 344
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + + + NPF +M E I L + NFFE RV++YQ+
Sbjct: 345 SSLMNQYVEFVADRLLVALGNKKYYNVS-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 402
Query: 122 L 122
+
Sbjct: 403 M 403
>gi|254586079|ref|XP_002498607.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
gi|238941501|emb|CAR29674.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
Length = 412
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL + ++ EA +E Y + +P +G+N
Sbjct: 284 RDEGLHTDFACLLF-------AHLKNRPSPDIVERIITEAVSIEKRYFEDALPVALLGMN 336
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G E + T NPF +M E I L + NFFE RV++YQ+
Sbjct: 337 AALMNQYVEFVADRLLVALGNEKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 394
Query: 122 LK 123
+
Sbjct: 395 MS 396
>gi|94986920|ref|YP_594853.1| ribonucleotide reductase, beta subunit [Lawsonia intracellularis
PHE/MN1-00]
gi|94731169|emb|CAJ54531.1| Ribonucleotide reductase, beta subunit [Lawsonia intracellularis
PHE/MN1-00]
Length = 333
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/125 (43%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE LH FGI VI + E R + E EIAYA+ + + +G
Sbjct: 212 LRDEVLHCTFGITVIKGLIEEENITLDPT---AVRQLWDEVEAAEIAYANYILHEPIIGY 268
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA +FIANRR Q+G++ F +N PW+ E +L+KEKNFFETRVTEYQ G
Sbjct: 269 NADLHIGQFRFIANRRSRQLGMKEPFPGAKNVLPWLDEQSNLRKEKNFFETRVTEYQTGG 328
Query: 121 ELKWD 125
LKWD
Sbjct: 329 GLKWD 333
>gi|195119943|ref|XP_002004488.1| GI19586 [Drosophila mojavensis]
gi|193909556|gb|EDW08423.1| GI19586 [Drosophila mojavensis]
Length = 393
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N
Sbjct: 268 RDEGLHCDFAVMMFR-------HLVQRPSRERIIEIISDAVTIEQEFLTDALPVNLIGMN 320
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+
Sbjct: 321 CALMSQYIEFVADRLLVELGVGKIYN-TKNPFTFM-EMISLDGKTNFFEKKVGEYQRMGV 378
Query: 122 LK 123
Sbjct: 379 TS 380
>gi|50311465|ref|XP_455757.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644893|emb|CAG98465.1| KLLA0F15103p [Kluyveromyces lactis]
Length = 401
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K + ++ EA +E Y + +P +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPNPEIVEKIITEAVEIEKRYFMDALPVSLLGMN 323
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + F T NPF +M E I L + NFFE RV++YQ+
Sbjct: 324 ADLMNQYVEFVADRLLVALGNKKYFNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381
Query: 122 L 122
+
Sbjct: 382 I 382
>gi|145580571|pdb|2UW2|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase
Subunit R2
Length = 332
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +++ R ++ A +E + E +P +G+N
Sbjct: 207 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 259
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 260 CTLMKQYIEFVADRLMLELGFSKVF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 317
Query: 122 LK 123
+
Sbjct: 318 MS 319
>gi|301774462|ref|XP_002922647.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Ailuropoda melanoleuca]
Length = 387
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N
Sbjct: 262 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 314
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+ A
Sbjct: 315 CVLMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVAEYQRFAV 372
Query: 122 L 122
+
Sbjct: 373 M 373
>gi|50949848|emb|CAH10473.1| hypothetical protein [Homo sapiens]
Length = 297
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + P ++ R ++ +A +E + E +P G +G+N
Sbjct: 172 RDEGLHCDFACLMFQYLVNKPPE-------ERVREIIVDAVKIEQEFLTEALPVGLIGMN 224
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 225 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 282
Query: 122 L 122
+
Sbjct: 283 M 283
>gi|303278144|ref|XP_003058365.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459525|gb|EEH56820.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 338
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +L K R ++ EA +E + + +P VG+N
Sbjct: 208 RDEGLHRDFACLLYS-------YLQNKPDVSIVRQIVCEAVEIEKEFVCDALPVSLVGMN 260
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+Y++F+A+ Q+GLE + T NPF +M E+I L+ + NFFE RV EYQ+
Sbjct: 261 KDLMSEYIEFVADHLLGQLGLEKEYN-TVNPFEFM-ELISLQGKTNFFEKRVGEYQKSGV 318
Query: 122 L 122
+
Sbjct: 319 M 319
>gi|194883840|ref|XP_001976005.1| GG22616 [Drosophila erecta]
gi|190659192|gb|EDV56405.1| GG22616 [Drosophila erecta]
Length = 393
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + ++ ++ +A +E + + +P +G+N
Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQRPKHERIIEIIRDAVAIEQEFLTDALPVNLIGMN 320
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+
Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVAEYQRMGV 378
Query: 122 LK 123
Sbjct: 379 AS 380
>gi|211956300|ref|YP_002302368.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
gi|115503095|gb|ABI99013.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
Length = 321
Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + Q+ + ++ EA +E ++ +P +G+N
Sbjct: 196 RDEGLHCDFACLMFKQLL-------HPPNPSRIINIIVEAVSIEKSFLTTALPVKLIGMN 248
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G +FK +ENPF +M I L+ + NFFE RV++YQ+
Sbjct: 249 CELMCQYIEFVADRLLSELGCTKIFK-SENPFDFMES-ISLEGKTNFFEKRVSDYQKMGI 306
Query: 122 LK 123
+
Sbjct: 307 MS 308
>gi|302904131|ref|XP_003049009.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729943|gb|EEU43296.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 389
Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +K + +Q + ++ +A +E + E +P +G+N
Sbjct: 252 RDEGLHTDFACLLHSHLKG-------RASKQVIQDIITDAVTIEQEFLTEALPCALLGMN 304
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +QY++F+A+R +G E ++K NPF +M E I L + NFFE RV +YQ+
Sbjct: 305 ADLMKQYIEFVADRLLVALGNEKVYKSA-NPFDFM-ENISLGGKTNFFEKRVGDYQKAGV 362
Query: 122 L 122
L
Sbjct: 363 L 363
>gi|328872436|gb|EGG20803.1| ribonucleotide reductase small subunit [Dictyostelium fasciculatum]
Length = 335
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N++ K + +++ +A E + +++P +G+N
Sbjct: 201 RDEGLHCDFACLLYNKL-------NNKLDVKTIESIIRDAVECEKEFVTDSLPVDLIGMN 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +Y++F A+R +G + ++ NPF WM E+I L ++ NFFE +V+EY +
Sbjct: 254 SREMSKYIEFCADRLLVSLGYKKIYNSA-NPFDWM-EMISLMRKANFFEGKVSEYAKAGV 311
Query: 122 LK 123
K
Sbjct: 312 AK 313
>gi|55742360|ref|NP_001007164.1| ribonucleoside-diphosphate reductase subunit M2 B [Danio rerio]
gi|29561808|emb|CAD87804.1| novel protein similar to vertebrate ribonucleotide reductase M2 B
(TP53 inducible) (RRM2B) [Danio rerio]
Length = 349
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH NF + + + K + ++ +A +E + E +P +G+N
Sbjct: 224 RDEGLHCNFACLIYSYLVK-------KPSVDRVNDIIAKAVSIEQEFLTEALPVNLIGMN 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R +GL + +ENPF +M I L+ + NFFE RV EYQ+
Sbjct: 277 CSLMKQYIEFVADRLLTDLGLPKAY-CSENPFDFMES-ISLEGKTNFFEKRVAEYQRLGV 334
Query: 122 LK 123
+
Sbjct: 335 MS 336
>gi|79160106|gb|AAI08038.1| Rrm2b protein [Danio rerio]
Length = 349
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH NF + + + K + ++ +A +E + E +P +G+N
Sbjct: 224 RDEGLHCNFACLMYSYLVK-------KPSVDRVNDIIAKAVSIEQEFLTEALPVNLIGMN 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R +GL + +ENPF +M I L+ + NFFE RV EYQ+
Sbjct: 277 CSLMKQYIEFVADRLLTDLGLPKAY-CSENPFDFMES-ISLEGKTNFFEKRVAEYQRLGV 334
Query: 122 LK 123
+
Sbjct: 335 MS 336
>gi|266919|sp|P29883|RIR2_VACCP RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|335710|gb|AAA48294.1| F14 [Vaccinia virus]
Length = 319
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R+++ +A +E + +P +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305
Query: 122 LK 123
+
Sbjct: 306 MS 307
>gi|324509007|gb|ADY43795.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
Length = 337
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + IK K Q++ ++ EA LE Y E +P +G+N
Sbjct: 212 RDEGLHRDFACLLYKYIK-------HKPSQEQVYEIIKEAVSLEQEYLTEALPVDLIGMN 264
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++++A+ ++G ++ NPF +M E + ++ + NFFE RV+EYQ+
Sbjct: 265 CRLMSQYIEYVADHLLTELGYPKVYN-ASNPFDFM-ENLSIEAKTNFFERRVSEYQRAGV 322
Query: 122 LK 123
L
Sbjct: 323 LS 324
>gi|187903099|ref|YP_001883390.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
domestica salivary gland hypertrophy virus]
gi|187384748|gb|ACD03521.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
domestica salivary gland hypertrophy virus]
Length = 343
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + + L + +++ ++ EA +E + + +P +G+N
Sbjct: 211 RDEGMHCDFAVLLFKRY------LVNRPSEERVGEIVREAVTIEQEFLTDALPVSLIGMN 264
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G++ ++ T+NPF +M +I L + NFFE RV +YQ+
Sbjct: 265 CGLMSQYIEFVADRLLVDLGMKRIYN-TKNPFDFMD-MISLDGKTNFFEKRVGDYQRLGV 322
Query: 122 LK 123
K
Sbjct: 323 AK 324
>gi|255711354|ref|XP_002551960.1| KLTH0B03938p [Lachancea thermotolerans]
gi|238933338|emb|CAR21522.1| KLTH0B03938p [Lachancea thermotolerans]
Length = 403
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K ++ EA +E Y + +P +G+N
Sbjct: 273 RDEGLHTDFACLLF-------AHLKNKPDPAIIERIITEAVEIEQRYFRDALPVSLLGMN 325
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + + T NPF +M E I L + NFFE RV++YQ+
Sbjct: 326 ADLMNQYVEFVADRLLVALGNQKFYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 383
Query: 122 L 122
+
Sbjct: 384 M 384
>gi|56713400|gb|AAW23440.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
gi|56713684|gb|AAW23722.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
gi|88854075|gb|ABD52493.1| ribonucleoside-diphosphate reductase subunit [Vaccinia virus]
gi|167412519|gb|ABZ79953.1| ribonucleotide reductase small subunit [Vaccinia virus GLV-1h68]
Length = 319
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R+++ +A +E + +P +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305
Query: 122 LK 123
+
Sbjct: 306 MS 307
>gi|120437796|ref|YP_863482.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
KT0803]
gi|117579946|emb|CAL68415.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
KT0803]
Length = 325
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 71/124 (57%), Gaps = 8/124 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + NQ HL + ++K R +L +A +E + E++P +G+N
Sbjct: 198 RDEGMHCDFAVHLHNQ------HLVNQVPKEKIREILIDALNIEREFVTESLPVSLIGMN 251
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+ +R ++ E + + NPF +M +I+L+ + NFFE RV+EYQ+
Sbjct: 252 AKLMTQYLEFVTDRLLVELDCEKEYNVS-NPFDFMD-MINLQGKTNFFEKRVSEYQKAGV 309
Query: 122 LKWD 125
+ D
Sbjct: 310 MNKD 313
>gi|289177076|ref|NP_001165949.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 3 [Homo
sapiens]
gi|55631160|ref|XP_528204.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) isoform 3
[Pan troglodytes]
gi|42794058|dbj|BAD11774.1| p53-inducible ribonucleotide reductase small subunit 2 long form
[Homo sapiens]
gi|119612246|gb|EAW91840.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_a [Homo
sapiens]
Length = 299
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N
Sbjct: 174 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 226
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 227 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 284
Query: 122 L 122
+
Sbjct: 285 M 285
>gi|42544136|ref|NP_056528.2| ribonucleoside-diphosphate reductase subunit M2 B isoform 1 [Homo
sapiens]
gi|114621161|ref|XP_001153916.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) isoform 2
[Pan troglodytes]
gi|74727333|sp|Q7LG56|RIR2B_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
AltName: Full=TP53-inducible ribonucleotide reductase M2
B; AltName: Full=p53-inducible ribonucleotide reductase
small subunit 2-like protein; Short=p53R2
gi|261278726|pdb|3HF1|A Chain A, Crystal Structure Of Human P53r2
gi|261278727|pdb|3HF1|B Chain B, Crystal Structure Of Human P53r2
gi|7229086|dbj|BAA92434.1| ribonucleotide reductase [Homo sapiens]
gi|7229115|dbj|BAA92493.1| ribonucleotide reductase [Homo sapiens]
gi|45259569|dbj|BAD12267.1| p53-inducible ribonucleotide reductase small subunit 2 [Homo
sapiens]
gi|52545612|emb|CAB70703.2| hypothetical protein [Homo sapiens]
gi|63055293|gb|AAY29059.1| ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
gi|80473666|gb|AAI08262.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
gi|109659128|gb|AAI17497.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
gi|119612247|gb|EAW91841.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_b [Homo
sapiens]
gi|120660296|gb|AAI30629.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
gi|190689549|gb|ACE86549.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
construct]
gi|190690911|gb|ACE87230.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
construct]
gi|261859014|dbj|BAI46029.1| ribonucleotide reductase M2 B [synthetic construct]
gi|313882916|gb|ADR82944.1| ribonucleotide reductase M2 B (TP53 inducible) [synthetic
construct]
Length = 351
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336
Query: 122 L 122
+
Sbjct: 337 M 337
>gi|290995765|ref|XP_002680453.1| predicted protein [Naegleria gruberi]
gi|284094074|gb|EFC47709.1| predicted protein [Naegleria gruberi]
Length = 338
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +K +TK QQ ++++EA +E + E++P +G+N
Sbjct: 212 RDEGLHTDFACLLYSTLK------YTKLPQQVVHSLVYEAVEIEKEFISESLPVDLIGMN 265
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +QY++ +A+R IG E ++ + NPF WM+ +I + + NFFE +V EY +
Sbjct: 266 SRLMQQYIEMVADRLLVSIGYEKIYN-SSNPFDWMN-IISVSGKTNFFEKKVGEYAKANI 323
Query: 122 LK 123
+
Sbjct: 324 MS 325
>gi|227541|prf||1706181A ribonucleotide reductase
Length = 290
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +++ R ++ A +E + E +P +G+N
Sbjct: 165 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 217
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 218 CTLMKQYIEFVADRLMLELGFSKVF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 275
Query: 122 LK 123
+
Sbjct: 276 MS 277
>gi|66275840|ref|YP_232925.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|132629|sp|P11158|RIR2_VACCV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|335624|gb|AAA48244.1| F4L protein [Vaccinia virus]
gi|335809|gb|AAA88680.1| ribonucleotide reductase (EC 1.17.4.1) small subunit [Vaccinia
virus]
gi|29692149|gb|AAO89322.1| ribonucleotide reductase small subunit [Vaccinia virus WR]
Length = 319
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R+++ +A +E + +P +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305
Query: 122 LK 123
+
Sbjct: 306 MS 307
>gi|68069763|ref|XP_676793.1| ribonucleotide reductase small subunit [Plasmodium berghei strain
ANKA]
gi|56496646|emb|CAI04349.1| ribonucleotide reductase small subunit, putative [Plasmodium
berghei]
Length = 158
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 69/121 (57%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + P + + ++ EA +E ++ E++P +G+N
Sbjct: 33 RDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICESLPCDLIGMN 85
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G +F +++NPF WM +I L+ + NFFE RV +YQ+
Sbjct: 86 SRLMSQYIEFVADRLLECLGCSKVF-HSKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 143
Query: 122 L 122
+
Sbjct: 144 M 144
>gi|303272255|ref|XP_003055489.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463463|gb|EEH60741.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 322
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +K ++ + ++ +A +E + + + VG+N
Sbjct: 192 RDEGLHCDFACLLYSMLK-------HPLEPERLQEIVKDAVEIEKEFVCDALSCALVGMN 244
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +Y++F+A+R Q+G++ ++ T NPF WM I L+ + NFFE RV EYQ+
Sbjct: 245 ADLMSEYIEFVADRLLVQLGVDKVWN-TPNPFDWMES-ISLQGKTNFFERRVGEYQRNGV 302
Query: 122 L 122
+
Sbjct: 303 M 303
>gi|90660281|gb|ABD97395.1| ribonucleotide reductase small subunit [Cowpox virus]
Length = 333
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R+++ +A +E + +P +G+N
Sbjct: 209 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 261
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 262 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 319
Query: 122 LK 123
+
Sbjct: 320 MS 321
>gi|86134368|ref|ZP_01052950.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
MED152]
gi|85821231|gb|EAQ42378.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
MED152]
Length = 323
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + N H+ + + + + ++ +A +E + E++P +G+N
Sbjct: 198 RDEGMHCDFAVHL------HNNHIVNRVPKDRIKEIIVDALDIEREFVTESLPVSLIGMN 251
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+ +R + G E ++ T NPF +M E+I L+ + NFFE RV+EYQ+
Sbjct: 252 AKLMTQYLEFVTDRLLLEFGCEKVYDVT-NPFDFM-EMISLEGKTNFFEKRVSEYQKAGV 309
Query: 122 LK 123
Sbjct: 310 KS 311
>gi|20178418|ref|NP_619839.1| CPXV051 protein [Cowpox virus]
gi|20153036|gb|AAM13497.1|AF482758_48 CPXV051 protein [Cowpox virus]
Length = 333
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R+++ +A +E + +P +G+N
Sbjct: 209 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 261
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 262 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 319
Query: 122 LK 123
+
Sbjct: 320 MS 321
>gi|56404698|sp|O57175|RIR2_VACCA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|2772676|gb|AAB96415.1| ribonucleotide reductase, small subunit [Vaccinia virus]
gi|47088360|gb|AAT10430.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|160857924|emb|CAM58212.1| ribonucleotide reductase small subunit [Vaccinia virus Ankara]
Length = 319
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R+++ +A +E + +P +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305
Query: 122 LK 123
+
Sbjct: 306 MS 307
>gi|62637405|ref|YP_227403.1| Ribonucleotide reductase small subunit [Deerpox virus W-848-83]
gi|115503265|gb|ABI99183.1| ribonucleotide reductase small subunit [Deerpox virus W-848-83]
Length = 321
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + Q+ + ++ EA +E ++ + +P +G+N
Sbjct: 196 RDEGLHCDFACLMFKQLLY-------PPSTSRIINIIVEAVSIEKSFLTKALPVKLIGMN 248
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G +FK +ENPF +M I L+ + NFFE RV++YQ+
Sbjct: 249 CELMCQYIEFVADRLLSELGCNKIFK-SENPFDFMES-ISLEGKTNFFEKRVSDYQKMGI 306
Query: 122 LK 123
+
Sbjct: 307 MS 308
>gi|225434341|ref|XP_002276454.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 841
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
R E LH +F + + ++ + P QK ++HEA +E + E +P +G+
Sbjct: 713 RYEGLHCDFACLLYSLLQKQLP-------WQKVHHIVHEAMEIETQFICEALPCALIGMK 765
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A Y++F+ +R +G E + ENPF WM E I L+ NFF+ R+ +YQ+ +
Sbjct: 766 ATLMSHYIKFVVDRLLVALGYERKYNV-ENPFDWM-EFIFLQGNANFFQRRMGDYQKASI 823
Query: 122 LK 123
+
Sbjct: 824 MS 825
>gi|156847978|ref|XP_001646872.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
70294]
gi|156117553|gb|EDO19014.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
70294]
Length = 400
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + IK K ++ EA +E Y + +P +G+N
Sbjct: 270 RDEGLHTDFACLLFSHIK-------NKPDPAIVEKIVTEAVEIEKRYFTDALPVALLGMN 322
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R G E +FK ENPF +M E I L + NFFE RV++YQ+ +
Sbjct: 323 ADLMNQYVEFVADRLLVAFGNEKVFKV-ENPFDFM-ENISLAGKTNFFEKRVSDYQKASV 380
Query: 122 L 122
+
Sbjct: 381 I 381
>gi|46122063|ref|XP_385585.1| hypothetical protein FG05409.1 [Gibberella zeae PH-1]
Length = 399
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +K + +Q + ++ +A +E + E +P +G+N
Sbjct: 262 RDEGLHTDFACLLHSHLKG-------RASKQMIQDIITDAVSIEQEFLTEALPCALLGMN 314
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +QY++F+A+R +G E ++K + NPF +M E I L + NFFE RV +YQ+
Sbjct: 315 SNLMKQYIEFVADRLLVALGNEKVYK-STNPFDFM-ENISLGGKTNFFEKRVADYQKAGV 372
Query: 122 L 122
L
Sbjct: 373 L 373
>gi|148912897|ref|YP_001293211.1| hypothetical protein GTPV_gp017 [Goatpox virus Pellor]
Length = 321
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +K + +++EA +E + +P +G+N
Sbjct: 196 RDEGLHCDFACLIFKHLKY-------PPSNDIIKIIINEAVSIEKEFLTNIIPVKLIGMN 248
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++FIA+R ++G + +F + NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 249 CDLMSQYIEFIADRLLLELGCDKVF-MSTNPFDFM-ENISLEGKTNFFEKRVSEYQKMGV 306
Query: 122 LK 123
+
Sbjct: 307 IS 308
>gi|302678465|ref|XP_003028915.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
gi|300102604|gb|EFI94012.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
Length = 331
Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + HL + R ++ EA +E + + +P +G+N
Sbjct: 202 RDEGMHTDFACLLF-------AHLRRRPHPDVVRRIIMEAVTIEQEFLTDALPVSLIGMN 254
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G E ++ T NPF +M +I L+ + NFFE RV++Y+ A
Sbjct: 255 STLMCQYIEFVADRLLVALGNEKVYNVT-NPFDFMD-MISLQGKTNFFEKRVSDYKMAAV 312
>gi|118087248|ref|XP_418364.2| PREDICTED: hypothetical protein [Gallus gallus]
Length = 353
Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +L + +++ R ++ A +E + E +P G +G+N
Sbjct: 228 RDEGLHCDFACLMFH-------YLVNRPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 280
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F + ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 281 CTLMKQYIEFVADRLLMELGFSKVF-HAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 338
Query: 122 L 122
+
Sbjct: 339 M 339
>gi|197101489|ref|NP_001125944.1| ribonucleoside-diphosphate reductase subunit M2 B [Pongo abelii]
gi|75041724|sp|Q5R9G0|RIR2B_PONAB RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
gi|55729743|emb|CAH91600.1| hypothetical protein [Pongo abelii]
Length = 351
Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336
Query: 122 L 122
+
Sbjct: 337 M 337
>gi|301166951|emb|CBW26530.1| putative ribonucleoside-diphosphate reductase small chain subunit
[Bacteriovorax marinus SJ]
Length = 322
Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH F + + E + ++ ++ EA +E + E +P +G+N
Sbjct: 195 RDEGLHCEFACHIHELLTPEE-----QLNKETITQIITEAVSIEKEFITEAIPVSLIGMN 249
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +Y++F+A+ +++G E + TENPF WM E+I L+ + NFFE RV+EYQ+
Sbjct: 250 ADMMSRYIEFVADYWLNRLGCEKAYN-TENPFDWM-ELISLEGKTNFFEKRVSEYQKPGV 307
Query: 122 LKW 124
L
Sbjct: 308 LGD 310
>gi|225320685|dbj|BAH29738.1| ribonucleoside-diphosphate reductase subunit M2 [Dicyema japonicum]
Length = 337
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +K + P + + ++ EA +LE + E +P +G+N
Sbjct: 209 RDEGLHTDFACLLYHHLKKKLP-------RDRILQIITEAVVLEKEFLTEALPVALIGMN 261
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G + + Y +NPF +M E I L + NFFE RV EYQ+
Sbjct: 262 VNLMSQYIEFVADRLIIELGYDKHY-YAQNPFDFM-ENISLSGKTNFFEKRVGEYQRMGV 319
Query: 122 L 122
+
Sbjct: 320 M 320
>gi|193784694|dbj|BAG53847.1| unnamed protein product [Homo sapiens]
gi|193787382|dbj|BAG52588.1| unnamed protein product [Homo sapiens]
Length = 297
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +++ R ++ A +E + E +P +G+N
Sbjct: 172 RDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMN 224
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 225 CTLMKQYIEFVADRLMLELGFSKVF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 282
Query: 122 LK 123
+
Sbjct: 283 MS 284
>gi|148676854|gb|EDL08801.1| ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
Length = 297
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K + + R ++ +A +E + E +P G +G+N
Sbjct: 172 RDEGLHCDFACLMFQ-------YLVNKPSEDRVREIIADAVQIEQEFLTEALPVGLIGMN 224
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 225 CVLMKQYIEFVADRLLGELGFSKIF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 282
Query: 122 L 122
+
Sbjct: 283 M 283
>gi|195401438|ref|XP_002059320.1| GJ18335 [Drosophila virilis]
gi|194142326|gb|EDW58732.1| GJ18335 [Drosophila virilis]
Length = 394
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N
Sbjct: 269 RDEGLHCDFAVLMFQ-------HLVQRPCRERIIEIISDAVTIEQEFLTDALPVNLIGMN 321
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+Y++F+A+R ++G+ L+ T+NPF +M E+I L + NFFE +V EYQ+
Sbjct: 322 CALMSEYIEFVADRLLVELGVGKLYN-TKNPFTFM-EMISLDGKTNFFEKKVGEYQRMGV 379
Query: 122 LK 123
Sbjct: 380 TS 381
>gi|156386903|ref|XP_001634150.1| predicted protein [Nematostella vectensis]
gi|156221230|gb|EDO42087.1| predicted protein [Nematostella vectensis]
Length = 384
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K ++ R ++ +A ++E + +P +G+N
Sbjct: 259 RDEGLHCDFACLMYK-------YLVNKPDEETVRGIIKDAVVIEQEFLTSALPVKLIGMN 311
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R + + ++ ENPF +M E I L+ + NF+E RV EYQ+
Sbjct: 312 CALMRQYIEFVADRLLVALNCQKVYNV-ENPFDFM-ENISLEGKTNFYEKRVGEYQKSGV 369
Query: 122 LK 123
+
Sbjct: 370 MS 371
>gi|21492474|ref|NP_659593.1| Ribonucleotide reductase, small subunit [Sheeppox virus]
Length = 321
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +K + ++ EA +E + +P +G+N
Sbjct: 196 RDEGLHCDFACLIFKHLKY-------PPSNEIITIIIKEAVSIEKEFLTNIIPVKLIGMN 248
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++FIA+R ++G + +F + NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 249 CDLMSQYIEFIADRLLLELGCDKVF-MSINPFDFM-ENISLEGKTNFFEKRVSEYQKMGV 306
Query: 122 LK 123
+
Sbjct: 307 IS 308
>gi|167948644|ref|ZP_02535718.1| Ribonucleotide reductase, beta subunit [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 124
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 52/125 (41%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
MRDE LH +FGI V QI +E Q R M E E AYA + +G
Sbjct: 3 MRDEVLHASFGIRVAKQIMLEEN---IAPDPQAIREMWDECEAAEDAYAGYILRDPILGY 59
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+ +++ANRR QIGL + E PW+ E +L+KEKNFFET VTEYQ G
Sbjct: 60 SKDDHMGQFRYVANRRARQIGLSEPYPGAEATLPWLDEQANLRKEKNFFETTVTEYQTGG 119
Query: 121 ELKWD 125
L WD
Sbjct: 120 ALNWD 124
>gi|44971395|gb|AAS49745.1| RPXV032 [Rabbitpox virus]
Length = 319
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R+++ +A +E + +P +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305
Query: 122 LK 123
+
Sbjct: 306 MS 307
>gi|1710398|sp|P50650|RIR2_PLAF4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase R2 subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|555613|gb|AAA50170.1| ribonucleotide reductase small subunit [Plasmodium falciparum]
Length = 349
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + + P Q + ++ EA +E ++ E++P +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLDNKLPE-------QIIQNIVKEAVEVERSFICESLPCDLIGMN 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G +F +++NPF WM +I L+ + NFFE RV +YQ+
Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 334
Query: 122 L 122
+
Sbjct: 335 M 335
>gi|132628|sp|P20493|RIR2_VACCC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|335366|gb|AAA48018.1| putative F4L [Vaccinia virus Copenhagen]
Length = 319
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R+++ +A +E + +P +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305
Query: 122 LK 123
+
Sbjct: 306 MS 307
>gi|111184227|gb|ABH08147.1| HSPV044 [Horsepox virus]
Length = 319
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R+++ +A +E + +P +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305
Query: 122 LK 123
+
Sbjct: 306 MS 307
>gi|22164633|ref|NP_671546.1| EVM028 [Ectromelia virus]
gi|22123774|gb|AAM92332.1|AF523264_28 EVM028 [Ectromelia virus]
Length = 319
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R+++ +A +E + +P +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++FIA+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFIADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305
Query: 122 LK 123
+
Sbjct: 306 MS 307
>gi|326917964|ref|XP_003205263.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Meleagris gallopavo]
Length = 353
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +L + +++ R ++ A +E + E +P G +G+N
Sbjct: 228 RDEGLHCDFACLMFH-------YLVNRPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 280
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F + ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 281 CTLMKQYIEFVADRLLMELGFSKVF-HAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 338
Query: 122 L 122
+
Sbjct: 339 M 339
>gi|302682638|ref|XP_003031000.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
gi|300104692|gb|EFI96097.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
Length = 362
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F ++ H+ + + ++ EA +E + + +P +G+N
Sbjct: 238 RDEGMHTDFACLLL-------THMRRRPHPEVIEMIIKEAVAIEKEFLTDALPVSLIGMN 290
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G + ++ NPF +M +I L+ + NFFE RV++Y+ A
Sbjct: 291 ADLMCQYIEFVADRLLVALGNDKVWN-ATNPFDFMD-MISLQGKTNFFEKRVSDYKIAAV 348
>gi|146298285|ref|YP_001192876.1| ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
UW101]
gi|146152703|gb|ABQ03557.1| Ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
UW101]
Length = 325
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 70/124 (56%), Gaps = 8/124 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + N HL K +++ + ++ +A +E + E++P +G+N
Sbjct: 198 RDEGVHCDFAVHLHNH------HLVNKVPKERIKEIIVDALDIERQFVTESLPVSLIGMN 251
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R ++G E ++ NPF +M +I L+ + NFFE RV EYQ+
Sbjct: 252 AGLMTQYLEFVADRLLVELGCERVYGSA-NPFDFMD-MISLQGKTNFFEKRVAEYQKSGV 309
Query: 122 LKWD 125
+ D
Sbjct: 310 MNTD 313
>gi|195436539|ref|XP_002066225.1| GK22247 [Drosophila willistoni]
gi|194162310|gb|EDW77211.1| GK22247 [Drosophila willistoni]
Length = 395
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + +++ ++ +A +E + +P +G+N
Sbjct: 270 RDEGLHCDFAVLMFQ-------HLVQRPSRERIIEIIRDAVQIEQEFLTVALPVNLIGMN 322
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+
Sbjct: 323 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFSFM-EMISLDGKTNFFEKKVGEYQRMGV 380
Query: 122 L 122
+
Sbjct: 381 V 381
>gi|328700093|ref|XP_001944536.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Acyrthosiphon pisum]
Length = 361
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K Q ++ EA +E + +P VG++
Sbjct: 233 RDEGLHTDFACLLFK-------HLEQKPPQAVITHIICEAVTIEQDFLTNALPVRMVGMS 285
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
Y++F+A+R +++G ++ + NPFP+M +I + + NFFE RV +YQ+ +
Sbjct: 286 CEKMAVYIEFVADRLLNELGCPTVY-RSSNPFPFMD-LISQQGKTNFFEKRVGDYQKASV 343
>gi|195172750|ref|XP_002027159.1| GL20023 [Drosophila persimilis]
gi|198459455|ref|XP_001361381.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
gi|194112972|gb|EDW35015.1| GL20023 [Drosophila persimilis]
gi|198136695|gb|EAL25959.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
Length = 391
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 68/122 (55%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + HL + +++ ++ +A +E + E +P +G+N
Sbjct: 266 RDEGLHCDFAVLMYH-------HLVQRPKRERIIEIIRDAVEIEQEFLTEALPVNLIGMN 318
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+
Sbjct: 319 CVLMSQYIEFVADRLLGELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVAEYQRMGV 376
Query: 122 LK 123
+
Sbjct: 377 VT 378
>gi|194474072|ref|NP_001124015.1| ribonucleoside-diphosphate reductase subunit M2 B [Rattus
norvegicus]
gi|149066498|gb|EDM16371.1| ribonucleotide reductase M2 B (TP53 inducible) (predicted) [Rattus
norvegicus]
Length = 351
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K +++ ++ +A +E + E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVMEIIVDAVKIEQEFLTEALPVGLIGMN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CVLMKQYIEFVADRLLGELGFSKIF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336
Query: 122 L 122
+
Sbjct: 337 M 337
>gi|27769295|gb|AAH42468.1| Similar to ribonucleotide reductase M2 polypeptide [Homo sapiens]
Length = 285
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N
Sbjct: 160 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 212
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 213 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 270
Query: 122 L 122
+
Sbjct: 271 M 271
>gi|7023557|dbj|BAA92005.1| unnamed protein product [Homo sapiens]
Length = 351
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGVN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336
Query: 122 L 122
+
Sbjct: 337 M 337
>gi|114621164|ref|XP_001153859.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
gi|119612248|gb|EAW91842.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_c [Homo
sapiens]
gi|194385642|dbj|BAG65196.1| unnamed protein product [Homo sapiens]
Length = 297
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N
Sbjct: 172 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 224
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 225 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 282
Query: 122 L 122
+
Sbjct: 283 M 283
>gi|71024571|ref|XP_762515.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
gi|46101992|gb|EAK87225.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
Length = 424
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ EA +E A+ E++P +G+N
Sbjct: 289 RDEGLHTDFACLLFSHLRR-------RAHPDTVLKIITEAVEIEKAFLCESIPVALIGMN 341
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++++A+R +G + + PF +M+ I L+ + NFFE +V EY +
Sbjct: 342 SKLMCQYIEYVADRLLVSLGNPVHYG-STCPFDFMTN-ISLEGKTNFFEKKVAEYAKAGV 399
Query: 122 LKWD 125
+ D
Sbjct: 400 ARKD 403
>gi|1808636|emb|CAA64118.1| G4L protein [Cowpox virus]
Length = 319
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ ++++ +A +E + +P +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVKSIITDAVSIEQEFLTAALPVKLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305
Query: 122 LK 123
+
Sbjct: 306 MS 307
>gi|312075738|ref|XP_003140550.1| ribonucleotide reductase M2 B [Loa loa]
gi|307764288|gb|EFO23522.1| ribonucleotide reductase M2 B [Loa loa]
Length = 350
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + IK K +++ ++ EA +E Y E +P +G+N
Sbjct: 225 RDEGLHRDFACLLYTYIK-------NKPSEERIYQIIREAVDIEKEYLTEALPVDLIGIN 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++++A+ ++ ++ Y++NPF +M I ++ + NFFE RV+EYQ+
Sbjct: 278 CKLMCQYIEYVADHLLTELHCAKMY-YSDNPFDFMER-ISIEAKTNFFEKRVSEYQKAGV 335
Query: 122 L 122
L
Sbjct: 336 L 336
>gi|90023100|ref|YP_528927.1| amino acid adenylation [Saccharophagus degradans 2-40]
gi|89952700|gb|ABD82715.1| Class Ia ribonucleoside-diphosphate reductase beta subunit
[Saccharophagus degradans 2-40]
Length = 368
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 53/125 (42%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
MRDE++H FGI ++QI IEN T +TM EA E YA + + +G
Sbjct: 248 MRDETMHCAFGIQTVSQIIIENC---TNIDVDAIKTMWEEADEAEANYARYILREPILGY 304
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A + +FIANRR Q+GLE F + PW+ E +++KEKNFFETRV EYQ
Sbjct: 305 SANDHIEQFRFIANRRARQLGLEEPFPQAKCALPWLDEQANIRKEKNFFETRVIEYQ-AG 363
Query: 121 ELKWD 125
L+WD
Sbjct: 364 GLEWD 368
>gi|438946|gb|AAA60776.1| homolog of vaccinia virus CDS F4L (ribonucleotide reductase, small
chain); putative [Variola major virus]
gi|94484491|gb|ABF23604.1| ribonucleotide reductase small subunit [Variola virus]
gi|94484688|gb|ABF23800.1| ribonucleotide reductase small subunit [Variola virus]
gi|94484886|gb|ABF23997.1| ribonucleotide reductase small subunit [Variola virus]
gi|109724274|gb|ABG43399.1| ribonucleotide reductase small subunit [Variola virus]
Length = 333
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R+++ +A +E + +P +G+N
Sbjct: 209 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 261
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 262 CEMMKTYIKFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 319
Query: 122 LK 123
+
Sbjct: 320 MS 321
>gi|113195221|ref|YP_717351.1| ribonucleotide reductase small subunit [Taterapox virus]
gi|90660497|gb|ABD97610.1| ribonucleotide reductase small subunit [Taterapox virus]
Length = 319
Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R+++ +A +E + +P +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305
Query: 122 LK 123
+
Sbjct: 306 MS 307
>gi|37551487|gb|AAQ93139.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|38348909|gb|AAR17885.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|88900660|gb|ABD57572.1| VACV040 [Vaccinia virus]
gi|90819703|gb|ABD98513.1| VACV-DUKE-051 [Vaccinia virus]
Length = 319
Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R ++ +A +E + +P +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRYIITDAVSIEQEFLTAALPVKLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305
Query: 122 LK 123
+
Sbjct: 306 MS 307
>gi|294877483|ref|XP_002768004.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239870142|gb|EER00722.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 247
Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +FG + N +K +T+ +++ ++ A +E + + +P G +G+N
Sbjct: 120 RDEGLHTDFGCLLYNMLK------FTRLPEERVEDIVRSAVNVEREFITDALPVGLIGMN 173
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113
A +Y++F+A+R +G ++ NPF WM+ +I L+ + NFFE RV
Sbjct: 174 AELMGRYIEFVADRLLVALGYAKIYNSA-NPFDWMT-MISLQGKTNFFEKRV 223
>gi|885759|gb|AAA69374.1| E4L [Variola virus]
gi|5830589|emb|CAB54628.1| E4L protein [Variola minor virus]
gi|94483674|gb|ABF22791.1| ribonucleotide reductase small subunit [Variola virus]
gi|94484287|gb|ABF23401.1| ribonucleotide reductase small subunit [Variola virus]
gi|94485692|gb|ABF24799.1| ribonucleotide reductase small subunit [Variola virus]
gi|94486095|gb|ABF25200.1| ribonucleotide reductase small subunit [Variola virus]
gi|94486298|gb|ABF25402.1| ribonucleotide reductase small subunit [Variola virus]
gi|94486501|gb|ABF25604.1| ribonucleotide reductase small subunit [Variola virus]
gi|94486703|gb|ABF25805.1| ribonucleotide reductase small subunit [Variola virus]
gi|94486906|gb|ABF26007.1| ribonucleotide reductase small subunit [Variola virus]
gi|94487312|gb|ABF26411.1| ribonucleotide reductase small subunit [Variola virus]
gi|94487921|gb|ABF27017.1| ribonucleotide reductase small subunit [Variola virus]
gi|94489931|gb|ABF29017.1| ribonucleotide reductase small subunit [Variola virus]
gi|109724476|gb|ABG43600.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635085|gb|ABU91534.1| ribonucleotide reductase small subunit [Variola virus]
Length = 319
Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R+++ +A +E + +P +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305
Query: 122 LK 123
+
Sbjct: 306 MS 307
>gi|124808087|ref|XP_001348226.1| ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
gi|23497116|gb|AAN36665.1|AE014816_50 ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
Length = 349
Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + + P Q + ++ EA +E ++ E++P +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLDNKLPE-------QMVQNIVKEAVEVERSFICESLPCDLIGMN 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G +F +++NPF WM +I L+ + NFFE RV +YQ+
Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 334
Query: 122 L 122
+
Sbjct: 335 M 335
>gi|322795965|gb|EFZ18591.1| hypothetical protein SINV_11129 [Solenopsis invicta]
Length = 426
Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + I K + ++++ +A +E + + +P +G+N
Sbjct: 296 RDEGLHCDFACLIFKHIIQ-------KPSFEHVKSIIMDAVEIEKEFLTQALPVELIGMN 348
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
Y++F+A+R +G E ++ +ENPF +M+ I L+ + NFFE +V EY++
Sbjct: 349 CSLMCNYIEFVADRLFVALGFEKVYN-SENPFSFMN-FISLEGKTNFFEKKVGEYKKFGV 406
Query: 122 LK 123
++
Sbjct: 407 VE 408
>gi|319953269|ref|YP_004164536.1| ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
14237]
gi|319421929|gb|ADV49038.1| Ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
14237]
Length = 326
Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 70/124 (56%), Gaps = 8/124 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + N+ H+ + +++ +L +A +E + E++P +G+N
Sbjct: 198 RDEGMHCDFAVHLHNK------HIINQVPKERITEILVDALNIEREFITESLPASLIGMN 251
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+ +R ++ + ++ + NPF +M +I ++ + NFFE RV+EYQ+
Sbjct: 252 SKLMTQYLEFVTDRLLVELECDKVYN-STNPFDFMD-MIGMEGKTNFFEKRVSEYQKAGV 309
Query: 122 LKWD 125
L D
Sbjct: 310 LNSD 313
>gi|6525234|gb|AAF15363.1|AF205376_1 ribonucleotide reductase R2 subunit [Plasmodium falciparum]
Length = 320
Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + + P Q + ++ EA +E ++ E++P +G+N
Sbjct: 195 RDEGLHTDFNCLIYSLLDNKLPE-------QMVQNIVKEAVEVERSFICESLPCDLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G +F +++NPF WM +I L+ + NFFE RV +YQ+
Sbjct: 248 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 305
Query: 122 L 122
+
Sbjct: 306 M 306
>gi|68485781|ref|XP_713171.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
gi|68485874|ref|XP_713125.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
gi|46434604|gb|EAK94008.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
gi|46434651|gb|EAK94054.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
gi|238883648|gb|EEQ47286.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
albicans WO-1]
Length = 394
Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H ++ + + +K K + ++ EA +E Y + +P +G+N
Sbjct: 266 RDEGIHTDYACLLFSYLK-------NKPSSEIIEKIITEAVDIEKEYFSDALPVSLLGMN 318
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R G + + T NPF +M E I L + NFFE RV++YQ+
Sbjct: 319 CDLMCQYVEFVADRLLVAFGNKKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 376
Query: 122 LK 123
++
Sbjct: 377 ME 378
>gi|307192386|gb|EFN75622.1| Ribonucleoside-diphosphate reductase subunit M2 [Harpegnathos
saltator]
Length = 344
Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K ++ +T++ +A +E + + +P +G+N
Sbjct: 214 RDEGLHCDFACLMFKHVIQ-------KPSFERVKTIIMDAVEIEKEFLTQALPVKLIGMN 266
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
Y++F+A+R +G + ++ +ENPF +M I L+ + NFFE +V EY++
Sbjct: 267 CTLMCTYIEFVADRLFVALGFDKVYN-SENPFSFMD-FISLEGKTNFFEKKVGEYKKFGV 324
Query: 122 LK 123
++
Sbjct: 325 ME 326
>gi|195027582|ref|XP_001986661.1| GH20400 [Drosophila grimshawi]
gi|193902661|gb|EDW01528.1| GH20400 [Drosophila grimshawi]
Length = 393
Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N
Sbjct: 268 RDEGLHCDFAVMMFQ-------HLVQRPSRERIIEIVSDAVTIEQEFLTDALPVNLIGMN 320
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+Y++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+
Sbjct: 321 CALMSEYIEFVADRLLVELGVGKIYN-TKNPFTFM-EMISLDGKTNFFEKKVGEYQRMGV 378
Query: 122 LK 123
Sbjct: 379 TS 380
>gi|885717|gb|AAA69333.1| C8L [Variola virus]
gi|885826|gb|AAA69439.1| C8L [Variola virus]
gi|94483878|gb|ABF22994.1| ribonucleotide reductase small subunit [Variola virus]
gi|94484081|gb|ABF23196.1| ribonucleotide reductase small subunit [Variola virus]
gi|94485084|gb|ABF24194.1| ribonucleotide reductase small subunit [Variola virus]
gi|94485286|gb|ABF24395.1| ribonucleotide reductase small subunit [Variola virus]
gi|94485489|gb|ABF24597.1| ribonucleotide reductase small subunit [Variola virus]
gi|94485894|gb|ABF25000.1| ribonucleotide reductase small subunit [Variola virus]
gi|94487109|gb|ABF26209.1| ribonucleotide reductase small subunit [Variola virus]
gi|94487515|gb|ABF26613.1| ribonucleotide reductase small subunit [Variola virus]
gi|94487716|gb|ABF26813.1| ribonucleotide reductase small subunit [Variola virus]
gi|94488123|gb|ABF27218.1| ribonucleotide reductase small subunit [Variola virus]
gi|94488323|gb|ABF27417.1| ribonucleotide reductase small subunit [Variola virus]
gi|94488523|gb|ABF27616.1| ribonucleotide reductase small subunit [Variola virus]
gi|94488724|gb|ABF27816.1| ribonucleotide reductase small subunit [Variola virus]
gi|94488925|gb|ABF28016.1| ribonucleotide reductase small subunit [Variola virus]
gi|94489125|gb|ABF28215.1| ribonucleotide reductase small subunit [Variola virus]
gi|94489324|gb|ABF28413.1| ribonucleotide reductase small subunit [Variola virus]
gi|94489527|gb|ABF28615.1| ribonucleotide reductase small subunit [Variola virus]
gi|94489726|gb|ABF28813.1| ribonucleotide reductase small subunit [Variola virus]
gi|94490135|gb|ABF29220.1| ribonucleotide reductase small subunit [Variola virus]
gi|109724070|gb|ABG43196.1| ribonucleotide reductase small subunit [Variola virus]
gi|109724681|gb|ABG43804.1| ribonucleotide reductase small subunit [Variola virus]
gi|109724885|gb|ABG44007.1| ribonucleotide reductase small subunit [Variola virus]
gi|109725088|gb|ABG44209.1| ribonucleotide reductase small subunit [Variola virus]
gi|109725293|gb|ABG44413.1| ribonucleotide reductase small subunit [Variola virus]
gi|109725496|gb|ABG44615.1| ribonucleotide reductase small subunit [Variola virus]
gi|109725700|gb|ABG44818.1| ribonucleotide reductase small subunit [Variola virus]
gi|109725903|gb|ABG45020.1| ribonucleotide reductase small subunit [Variola virus]
gi|109726107|gb|ABG45223.1| ribonucleotide reductase small subunit [Variola virus]
gi|109726310|gb|ABG45425.1| ribonucleotide reductase small subunit [Variola virus]
gi|109726513|gb|ABG45627.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635013|gb|ABU91466.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635031|gb|ABU91483.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635049|gb|ABU91500.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635067|gb|ABU91517.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635103|gb|ABU91551.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635121|gb|ABU91568.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635139|gb|ABU91585.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635158|gb|ABU91603.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635176|gb|ABU91620.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635194|gb|ABU91637.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635212|gb|ABU91654.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635230|gb|ABU91671.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635248|gb|ABU91688.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635266|gb|ABU91705.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635284|gb|ABU91722.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635320|gb|ABU91756.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635338|gb|ABU91773.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635356|gb|ABU91790.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635374|gb|ABU91807.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635392|gb|ABU91824.1| ribonucleotide reductase small subunit [Variola virus]
gi|157739431|gb|ABU91739.1| ribonucleotide reductase small subunit [Variola virus]
Length = 319
Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R+++ +A +E + +P +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIKFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305
Query: 122 LK 123
+
Sbjct: 306 MS 307
>gi|225012154|ref|ZP_03702591.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
MS024-2A]
gi|225003709|gb|EEG41682.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
MS024-2A]
Length = 325
Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + N HL K + + +L +A +E + E++P +G+N
Sbjct: 198 RDEGVHCDFAVHLHNH------HLVNKVPPARIKEILLDALTIEREFITESLPISLIGMN 251
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+ +R ++GLE F T NPF +M +I L+ + NFFE RV EYQ+
Sbjct: 252 AKLMTQYLEFVTDRLLQELGLEKEFNVT-NPFDFMD-MISLQGKTNFFEKRVGEYQKAGV 309
Query: 122 LK 123
L
Sbjct: 310 LN 311
>gi|241951880|ref|XP_002418662.1| ribonucleoside diphosphate reductase, putative [Candida
dubliniensis CD36]
gi|223642001|emb|CAX43965.1| ribonucleoside diphosphate reductase, putative [Candida
dubliniensis CD36]
Length = 394
Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H ++ + + +K K + ++ EA +E Y + +P +G+N
Sbjct: 266 RDEGIHTDYACLLFSYLK-------NKPSPEIIEKIITEAVTIEKKYFSDALPVSLLGMN 318
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R G + + T NPF +M E I L + NFFE RV++YQ+
Sbjct: 319 CDLMCQYVEFVADRLLVAFGNKKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 376
Query: 122 LK 123
++
Sbjct: 377 ME 378
>gi|194673004|ref|XP_607398.4| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
taurus]
gi|297482473|ref|XP_002692807.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Bos
taurus]
gi|296480530|gb|DAA22645.1| ribonucleotide reductase M2 polypeptide-like [Bos taurus]
Length = 351
Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CVLMKQYIEFVADRLLTELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336
Query: 122 L 122
+
Sbjct: 337 M 337
>gi|22595713|gb|AAN02745.1| ribonucleotide reductase small subunit [lumpy skin disease virus]
Length = 321
Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +K +++EA +E + +P +G+N
Sbjct: 196 RDEGLHCDFACLIFKHLKY-------PPSNDIITIIINEAVSIEKEFLTNIIPVKLIGMN 248
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++FIA+R ++G + +F + NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 249 CVLMSQYIEFIADRLLLELGCDKVF-MSTNPFDFM-ENISLEGKTNFFEKRVSEYQKMGV 306
Query: 122 LK 123
+
Sbjct: 307 IS 308
>gi|149721713|ref|XP_001493623.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) [Equus
caballus]
Length = 351
Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K +++ R ++ A +E + E +P +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVDLIGMN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CVLMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336
Query: 122 L 122
+
Sbjct: 337 M 337
>gi|194036959|ref|XP_001925036.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Sus
scrofa]
Length = 351
Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K + + R ++ A +E + E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEARVREIIVNAVEIEQEFLTEALPVGLIGMN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CVLMKQYIEFVADRLLTELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336
Query: 122 L 122
+
Sbjct: 337 M 337
>gi|89890041|ref|ZP_01201552.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
bacterium BBFL7]
gi|89518314|gb|EAS20970.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
bacterium BBFL7]
Length = 330
Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 68/122 (55%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + N HL K +++ ++ +A +E + E++P +G+N
Sbjct: 199 RDEGMHCDFAVHLHNH------HLVNKVPKERITEIIVDALNIEREFITESLPASLIGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+ +R ++ +P++ T NPF +M +I ++ + NFFE RV EYQ+
Sbjct: 253 AKLMTQYLEFVTDRLLGELECDPVYNVT-NPFDFMD-LIGMEGKTNFFEKRVGEYQKAGV 310
Query: 122 LK 123
+
Sbjct: 311 MN 312
>gi|15232077|ref|NP_189342.1| TSO2 (TSO meaning 'ugly' in Chinese); oxidoreductase/
ribonucleoside-diphosphate reductase/ transition metal
ion binding [Arabidopsis thaliana]
gi|75273949|sp|Q9LSD0|RIR2C_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain C;
AltName: Full=Ribonucleoside-diphosphate reductase TSO2
subunit; AltName: Full=Ribonucleotide reductase small
subunit C
gi|9279629|dbj|BAB01087.1| ribonucleotide reductase [Arabidopsis thaliana]
gi|17380726|gb|AAL36193.1| putative ribonucleotide reductase small subunit [Arabidopsis
thaliana]
gi|21436297|gb|AAM51287.1| putative ribonucleotide reductase small subunit [Arabidopsis
thaliana]
Length = 332
Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + L TK +++ ++++ +A +E + + +P VG+N
Sbjct: 201 RDEGLHCDFAC-------LLYTLLKTKLSEERVKSIVCDAVEIEREFVCDALPCALVGMN 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G ++ T NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 254 RDLMSQYIEFVADRLLGALGYGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 311
Query: 122 LK 123
+
Sbjct: 312 MS 313
>gi|145352915|ref|XP_001420779.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581014|gb|ABO99072.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 346
Score = 116 bits (291), Expect = 8e-25, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + ENP ++ ++ +A +E + + + VG+N
Sbjct: 220 RDEGLHCDFACLLYSML--ENP-----LSEKVLHQLVGDAVTIEKEFVCDALSCSLVGMN 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A Y++F+A+R Q+G+ L+ NPF WM E+I L+ + NFFE RV +YQ+
Sbjct: 273 ANMMSTYIEFVADRLLLQLGVSKLYNAV-NPFDWM-ELISLQGKANFFEHRVDQYQKAGV 330
Query: 122 LK 123
++
Sbjct: 331 MQ 332
>gi|13876672|gb|AAK43560.1| ribonucleoside reductase [lumpy skin disease virus]
Length = 321
Score = 116 bits (291), Expect = 9e-25, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +K +++EA +E + +P +G+N
Sbjct: 196 RDEGLHCDFACLIFKHLKY-------PPSNDIITIIINEAVSIEKEFLTNIIPVKLIGMN 248
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++FIA+R ++G + +F + NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 249 CVLMSQYIEFIADRLLLELGCDKVF-MSTNPFDFM-ENISLEGKTNFFEKRVSEYQKMGV 306
Query: 122 LK 123
+
Sbjct: 307 IS 308
>gi|56551339|ref|YP_162178.1| ribonucleotide-diphosphate reductase subunit beta [Zymomonas
mobilis subsp. mobilis ZM4]
gi|241760992|ref|ZP_04759081.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260753042|ref|YP_003225935.1| ribonucleotide-diphosphate reductase subunit beta [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|56542913|gb|AAV89067.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241374611|gb|EER64072.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552405|gb|ACV75351.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 345
Score = 116 bits (291), Expect = 9e-25, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDESLH I + + E TK+ + + +E A+ G
Sbjct: 189 VRDESLHCEGIIRLFHTFCQER-QCLTKQVKDDILNICQRTVRIEDAFIDLVFEMGPVEG 247
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ ++Y+++IA+ R Q+GL P++ E+P PW++ +++ + NFFETR TEY +
Sbjct: 248 MTPKEIKKYIRYIADWRLGQLGLSPIYMIEEHPLPWLTPLLNGVEHANFFETRSTEYSKA 307
Query: 120 AE-LKW 124
A W
Sbjct: 308 ATKGDW 313
>gi|17551968|ref|NP_497821.1| RiboNucleotide Reductase family member (rnr-2) [Caenorhabditis
elegans]
gi|1172941|sp|P42170|RIR2_CAEEL RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|3873950|emb|CAA84688.1| C. elegans protein C03C10.3, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 381
Score = 116 bits (291), Expect = 9e-25, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + ++++ K QQ+ ++ +A +E + E +P +G+N
Sbjct: 256 RDEGLHRDFACLLYSKLQK-------KLTQQRIYDIIKDAVAIEQEFLTEALPVDMIGMN 308
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+ ++G + L+K ++NPF +M E I + + NFFE RV+EYQ+
Sbjct: 309 CRLMSQYIEFVADHLLVELGCDKLYK-SKNPFDFM-ENISIDGKTNFFEKRVSEYQRPGV 366
Query: 122 L 122
+
Sbjct: 367 M 367
>gi|323452425|gb|EGB08299.1| hypothetical protein AURANDRAFT_59025 [Aureococcus anophagefferens]
Length = 319
Score = 116 bits (291), Expect = 9e-25, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 9/118 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + ++++ + + +++ A +E ++ +P +G+N
Sbjct: 194 RDEGLHCDFACLLYSKLRKKLSDVQ-------VASIVGAAVDIEKSFVVSALPVELIGMN 246
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ S +Y++F A+R ++G L+ NPF WM E+I L+ + NFFE RV EY +
Sbjct: 247 SKSMCKYIEFCADRLLLELGYSTLYG-ATNPFDWM-ELISLQGKTNFFEKRVGEYAKA 302
>gi|296282225|ref|ZP_06860223.1| ribonucleotide-diphosphate reductase subunit beta [Citromicrobium
bathyomarinum JL354]
Length = 354
Score = 116 bits (291), Expect = 9e-25, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDESLH I + ++ E +TK ++ + ++ LE + G
Sbjct: 189 VRDESLHCEGIIRLFHEFVRER-DCYTKAVKEDIIDICQKSVRLEDNFIDLAFEMGPVSG 247
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ A ++Y+++IA+ R Q+GL+P++ E+P PW++ +++ + NFFE R TEY +G
Sbjct: 248 MTAKEIKKYIRYIADWRLGQLGLQPIYMIDEHPLPWLTPLLNGVEHANFFEQRATEYSKG 307
Query: 120 AE-LKW 124
A W
Sbjct: 308 ATKGDW 313
>gi|70936723|ref|XP_739266.1| ribonucleotide reductase small subunit [Plasmodium chabaudi
chabaudi]
gi|56516136|emb|CAH80811.1| ribonucleotide reductase small subunit, putative [Plasmodium
chabaudi chabaudi]
Length = 349
Score = 116 bits (291), Expect = 9e-25, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 69/121 (57%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + P + + ++ EA +E ++ E++P +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICESLPCDLIGMN 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G +F +++NPF WM +I L+ + NFFE RV +YQ+
Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKVF-HSKNPFSWMD-LISLQGKTNFFEKRVADYQKSGV 334
Query: 122 L 122
+
Sbjct: 335 M 335
>gi|296227442|ref|XP_002759378.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
isoform 2 [Callithrix jacchus]
Length = 299
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N
Sbjct: 174 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 226
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G F ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 227 CILMKQYIEFVADRLLVELGFSKFF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 284
Query: 122 L 122
+
Sbjct: 285 M 285
>gi|299747484|ref|XP_001837064.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
okayama7#130]
gi|298407540|gb|EAU84681.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
okayama7#130]
Length = 379
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + ++ + ++ EA +E + + +P +G+N
Sbjct: 249 RDEGMHTDFACLLFAYLRK-------RPHSDTILAIVTEAVEIEKEFFSDALPVSLIGMN 301
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + + + +NPF +M E+I ++ + NFFE RV++Y +
Sbjct: 302 SSLMNQYIEFVADRLLTSLGNDKHY-HVDNPFDFM-ELISMEGKANFFEKRVSDYAKANV 359
>gi|297818266|ref|XP_002877016.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
lyrata]
gi|297322854|gb|EFH53275.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
lyrata]
Length = 329
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + L TK +++ ++++ +A +E + + +P VG+N
Sbjct: 198 RDEGLHCDFAC-------LLYTLLKTKLSEERVKSIVCDAVEIEREFVCDALPCALVGMN 250
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G ++ T NPF WM E+I L+ + NFFE RV +YQ+ +
Sbjct: 251 RDLMSQYIEFVADRLLGALGYGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGDYQKASV 308
Query: 122 LK 123
+
Sbjct: 309 MS 310
>gi|150024561|ref|YP_001295387.1| ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
psychrophilum JIP02/86]
gi|149771102|emb|CAL42569.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
psychrophilum JIP02/86]
Length = 325
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 70/124 (56%), Gaps = 8/124 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + N HL K +++ R+++ +A +E + E++P +G+N
Sbjct: 198 RDEGVHCDFAVHLHNH------HLVNKVPKERIRSIIVDALNIEREFITESLPVSLIGMN 251
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R ++G + + NPF +M +I L+ + NFFE +V EYQ+
Sbjct: 252 AVLMTQYLEFVADRLLVELGCDREYNTA-NPFDFMD-MISLQGKTNFFEKKVAEYQKAGV 309
Query: 122 LKWD 125
+ D
Sbjct: 310 MNTD 313
>gi|296227440|ref|XP_002759377.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
isoform 1 [Callithrix jacchus]
Length = 351
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G F ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 279 CILMKQYIEFVADRLLVELGFSKFF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 336
Query: 122 L 122
+
Sbjct: 337 M 337
>gi|215401283|ref|YP_002332587.1| ribonucleotide reductase small subunit [Helicoverpa armigera
multiple nucleopolyhedrovirus]
gi|198448783|gb|ACH88573.1| ribonucleotide reductase small subunit [Helicoverpa armigera
multiple nucleopolyhedrovirus]
Length = 313
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F N E K + M EA +E + + +P +G+N
Sbjct: 191 RDEGMHTDFACLYYNTRVNE------KLSYETILDMFKEAVDIEKEFFTDALPVALLGMN 244
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +Y++F+A+R Q+G + NPFP+M+ I L+ + NFFE RV EY+
Sbjct: 245 ADMMCEYIEFVADRLLLQLGQPKYYN-ARNPFPFMNN-ISLEGKTNFFERRVGEYKMFGT 302
Query: 122 LKW 124
Sbjct: 303 GSD 305
>gi|15826569|pdb|1JK0|A Chain A, Ribonucleotide Reductase Y2y4 Heterodimer
Length = 419
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K ++ EA +E Y + +P +G+N
Sbjct: 291 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 343
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+
Sbjct: 344 ADLMNQYVEFVADRLLVAFGNKKYYKV-ENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 401
Query: 122 LK 123
+
Sbjct: 402 MS 403
>gi|221120499|ref|XP_002159812.1| PREDICTED: similar to hCG23833 [Hydra magnipapillata]
Length = 387
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + H+ K +++ + ++ +A +EI + E++P +G+N
Sbjct: 255 RDEGLHCDFACLMYK-------HIVNKPSEERVKQIIRDAVAIEIEFLTESLPCDLLGMN 307
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F A+R + +G + ENPF +M E I L ++ NFFE+RV++YQ+
Sbjct: 308 KSLMKTYIEFCADRLINALGYSKEWNV-ENPFDFM-ENISLARKANFFESRVSDYQKAGV 365
Query: 122 LK 123
+
Sbjct: 366 MD 367
>gi|224046583|ref|XP_002198998.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
Length = 362
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +L + +++ ++ A +E + E +P G +G+N
Sbjct: 237 RDEGLHCDFACLMFH-------YLVNRPSEERVCEIIVNAVEIEQEFLTEALPVGLIGMN 289
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 290 CTLMKQYIEFVADRLLMELGFSKVFNV-ENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 347
Query: 122 L 122
+
Sbjct: 348 M 348
>gi|255080138|ref|XP_002503649.1| predicted protein [Micromonas sp. RCC299]
gi|226518916|gb|ACO64907.1| predicted protein [Micromonas sp. RCC299]
Length = 324
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +K + + ++ +A +E + + + VG+N
Sbjct: 192 RDEGLHCDFACLLYSMLK-------HPLDPARLQEIVKDAVDIEKEFVCDALSCALVGMN 244
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +Y++F+A+R Q+G+E ++ T NPF WM E+I L+ + NFFE RV +YQ+
Sbjct: 245 ADLMSEYIEFVADRLMTQLGVEKVWN-TPNPFEWM-EMISLQGKANFFEHRVDQYQKANV 302
Query: 122 LK 123
+
Sbjct: 303 MT 304
>gi|291388369|ref|XP_002710634.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
[Oryctolagus cuniculus]
Length = 339
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N
Sbjct: 214 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 266
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 267 CILMKQYIEFVADRLLMELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 324
Query: 122 L 122
+
Sbjct: 325 M 325
>gi|22549454|ref|NP_689227.1| putative ribonucleotide reductase small subunit-like protein
[Mamestra configurata NPV-B]
gi|22476633|gb|AAM95039.1| putative ribonucleotide reductase small subunit-like protein
[Mamestra configurata NPV-B]
Length = 313
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F N E K + M EA +E + + +P +G+N
Sbjct: 191 RDEGMHTDFACLYYNTRVNE------KLSYETILDMFKEAVDIEKEFFTDALPVALLGMN 244
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +Y++F+A+R Q+G + NPFP+M+ I L+ + NFFE RV EY+
Sbjct: 245 ADMMCEYIEFVADRLLLQLGQPKYYN-ARNPFPFMNN-ISLEGKTNFFERRVGEYKMFGT 302
Query: 122 LKW 124
Sbjct: 303 GSD 305
>gi|18640102|ref|NP_570176.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
gi|18448509|gb|AAL69755.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
Length = 320
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ +++ +A +E + +P +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSKEVITSIIIDAVNIEKEFLTVAIPVDLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G E +F NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 248 CCLMSQYIEFVADRLLTELGCEKVFNVY-NPFSFM-EYISLEGKTNFFERRVSEYQKMGV 305
>gi|327269406|ref|XP_003219485.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Anolis carolinensis]
Length = 414
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N
Sbjct: 289 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 341
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 342 CTLMKQYIEFVADRLLLELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 399
Query: 122 L 122
+
Sbjct: 400 M 400
>gi|320164906|gb|EFW41805.1| ribonucleotide reductase m2 polypeptide [Capsaspora owczarzaki ATCC
30864]
Length = 352
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + ++ +A +E + + +P +G+N
Sbjct: 227 RDEGLHCDFACMLFGLL-------NNRPSNADVLAIIKDAVAIEQEFLTDALPVALIGMN 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R +G E +K ENPF +M +I L+ + NFFE RV EYQ+
Sbjct: 280 GGLMKTYIEFVADRLLVALGQEKHYKV-ENPFDFMD-LISLQGKTNFFERRVGEYQKPGV 337
Query: 122 LK 123
+
Sbjct: 338 MS 339
>gi|209877302|ref|XP_002140093.1| ribonucleotide-diphosphate reductase, small subunit
[Cryptosporidium muris RN66]
gi|209555699|gb|EEA05744.1| ribonucleotide-diphosphate reductase, small subunit, putative
[Cryptosporidium muris RN66]
Length = 346
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +FG + + P + + ++ EA +E A+ +++P +G+N
Sbjct: 221 RDEGIHADFGCLLYKTLNNRLP-------YGRVQEIIAEAVEVERAFLCDSLPVDLIGMN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R + + ++ T NPF WM +I L+ + NFFE RV EYQ
Sbjct: 274 SRLMAQYIEFVADRLLFALDVPKIYNVT-NPFDWMD-LISLQGKTNFFEKRVAEYQMAGV 331
Query: 122 L 122
+
Sbjct: 332 M 332
>gi|190896516|gb|ACE96771.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRKKLSE-------ERVKGIVKDAVDIEREFVVDALPCALVGMN 170
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223
>gi|190896520|gb|ACE96773.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRKKLSE-------ERVKGIVKDAVDIEREFVVDALPCALVGMN 170
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223
>gi|190896508|gb|ACE96767.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896514|gb|ACE96770.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896522|gb|ACE96774.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896540|gb|ACE96783.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896542|gb|ACE96784.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRKKLSE-------ERVKGIVKDAVDIEREFVVDALPCALVGMN 170
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223
>gi|86132508|ref|ZP_01051102.1| ribonucleoside-diphosphate reductase small chain [Dokdonia
donghaensis MED134]
gi|85817069|gb|EAQ38253.1| ribonucleoside-diphosphate reductase small chain [Dokdonia
donghaensis MED134]
Length = 328
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + N HL K +++ ++ A +E + E++P +G+N
Sbjct: 198 RDEGVHCDFAVHLHNH------HLVNKVPKERITEIIVNALDIEREFITESLPVSLIGMN 251
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++++ +R ++ E ++ NPF +M +I L+ + NFFE RV EYQ+
Sbjct: 252 SNLMTQYLEYVTDRLLTELDCEKVYNTA-NPFDFMD-MISLQGKTNFFEKRVGEYQKAGV 309
Query: 122 LKW 124
+K
Sbjct: 310 VKD 312
>gi|67585619|ref|XP_665115.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis TU502]
gi|54655552|gb|EAL34885.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis]
Length = 296
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +K + P + + ++ EA +E + +++P +G+N
Sbjct: 171 RDEGLHADFACLIYKALKFKLP-------APRVQQIISEAVEVERNFLCDSLPVDLIGMN 223
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R + + ++ + NPF WM +I L+ + NFFE RV EYQ
Sbjct: 224 SRLMAQYIEFVADRLLFALDIPKIYNVS-NPFDWMD-LISLQGKTNFFEKRVGEYQMAGV 281
Query: 122 L 122
+
Sbjct: 282 M 282
>gi|302554045|ref|ZP_07306387.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
viridochromogenes DSM 40736]
gi|302471663|gb|EFL34756.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
viridochromogenes DSM 40736]
Length = 341
Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H++F DV++ ++ E P L+ + +Q+ ML EA E+ +A + G G+N
Sbjct: 215 RDETMHMSFAFDVVDTVRKEEPELFDDQLRQEVTDMLREAVEAELQFARDLCGDGLPGMN 274
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E
Sbjct: 275 TESMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 332
Query: 122 LKWD 125
D
Sbjct: 333 GTVD 336
>gi|155370982|ref|YP_001426516.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
virus 1]
gi|155124302|gb|ABT16169.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
virus 1]
Length = 325
Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH FG + +++ K ++++ EA E + + +P +G+N
Sbjct: 201 RDEGLHQQFGELLYSKL-------ENKLSLDVVKSIVEEAVANEKDFICDAIPCRMIGMN 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G F ENPF +M E+I L+ + NFFE RV+EYQ+
Sbjct: 254 SDLMSQYIEFVADRIFTALGYPKQFG-AENPFDFM-ELISLEGKSNFFERRVSEYQKAGV 311
Query: 122 LKWD 125
+ D
Sbjct: 312 MNAD 315
>gi|9632043|ref|NP_048832.1| hypothetical protein PBCV1_A476R [Paramecium bursaria Chlorella
virus 1]
gi|1620147|gb|AAC96843.1| contains ribonucleotide reductase (RR) signature; similar to
tobacco RR small subunit, corresponds to Swiss-Prot
Accession Number P49730 [Paramecium bursaria Chlorella
virus 1]
Length = 324
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 70/122 (57%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH FG + ++++ + P + + ++ EA E + + +P +G+N
Sbjct: 200 RDEGLHQQFGELMYSKLQNKLP-------FETVKQIITEAVENEKEFICDAIPCRLIGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G E ++ ++NPF +M E+I L+ + NFFE RV++YQ+
Sbjct: 253 AELMGQYIEFVADRIFVALGYEKVYN-SKNPFAFM-ELISLQGKTNFFEKRVSDYQRPGV 310
Query: 122 LK 123
+K
Sbjct: 311 MK 312
>gi|190896564|gb|ACE96795.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRKKLSE-------ERVKGIVKDAVDIEREFVVDALPCALVGMN 170
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223
>gi|73974198|ref|XP_539109.2| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
inducible) isoform 2 [Canis familiaris]
Length = 351
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+ A
Sbjct: 279 CVLMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVAEYQRFAV 336
Query: 122 L 122
+
Sbjct: 337 M 337
>gi|190896532|gb|ACE96779.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896554|gb|ACE96790.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRKKLSE-------ERVKGIVKDAVDIEREFVVDALPCALVGMN 170
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223
>gi|190896510|gb|ACE96768.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896556|gb|ACE96791.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896562|gb|ACE96794.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRKKLSE-------ERVKGIVKDAVDIEREFVVDALPCALVGMN 170
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223
>gi|305665630|ref|YP_003861917.1| putative ribonucleoside-diphosphate reductase small chain
[Maribacter sp. HTCC2170]
gi|88710386|gb|EAR02618.1| probable ribonucleoside-diphosphate reductase small chain
[Maribacter sp. HTCC2170]
Length = 328
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H ++ + + H+ K +++ ++ +A +E + E++P +G+N
Sbjct: 199 RDEGMHCDYAVHLHKN------HIVNKVTKERITDIIVDALNIEREFITESLPVSLIGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+ +R ++ + ++ + NPF +M +I L+ + NFFE RV+EYQ+
Sbjct: 253 SKLMTQYLEFVTDRLLVELECDKVYN-SSNPFDFMD-MISLQGKTNFFEKRVSEYQKAGV 310
Query: 122 LKWD 125
L D
Sbjct: 311 LNKD 314
>gi|114568952|ref|YP_755632.1| ribonucleotide-diphosphate reductase subunit beta [Maricaulis maris
MCS10]
gi|114339414|gb|ABI64694.1| Ribonucleoside-diphosphate reductase [Maricaulis maris MCS10]
Length = 345
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDESLH I + + E L T+E + LE + G
Sbjct: 197 IRDESLHCEGMIKLFHAFAEETGAL-TQEVKDDITECCRTVVGLEDKFIDLAFEAGDVEG 255
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ + Y+++IA+ R Q+GL ++ E+P PW+SE+++ + NFFE R TEY +G
Sbjct: 256 MTPDDIKTYIRYIADWRLGQLGLPKIYGVKEHPLPWLSEILNGVEHANFFEARATEYSKG 315
Query: 120 AE-LKW 124
A W
Sbjct: 316 ATKGDW 321
>gi|15150459|ref|NP_150454.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
virus NI-2490]
gi|15149031|gb|AAK84981.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
virus NI-2490]
gi|22595554|gb|AAN02587.1| ribonucleotide reductase small subunit [Lumpy skin disease virus
NW-LW]
Length = 321
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +K + +++EA +E + +P +G+N
Sbjct: 196 RDEGLHCDFACLIFKHLKY-------PPSNEIITIIINEAVSIEKEFLTNIIPVKLIGMN 248
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++FIA+R ++G + +F + NPF +M E I L+ + NFFE RV+EYQ+
Sbjct: 249 CDLMSQYIEFIADRLLLELGCDKVF-MSTNPFDFM-ENISLEGKTNFFEKRVSEYQKMGV 306
Query: 122 LK 123
+
Sbjct: 307 IS 308
>gi|170664480|gb|ACB28637.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|170664652|gb|ACB28808.1| small subunit ribonucleotide reductase [recombinant virus
6918VP60-T2]
Length = 322
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +K +++ +++ EA ++E + E +P +G+N
Sbjct: 198 RDEGLHCDFACLMFKHLK-------HTPSEERVASIIKEAVVIEQRFLTEALPVRLIGMN 250
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G +F NPF +M E I L+ + NFFE RV++YQ+
Sbjct: 251 CELMCQYIEFVADRLIAELGYSKIF-SATNPFDFM-ENISLEGKTNFFEKRVSDYQRMGV 308
Query: 122 L 122
+
Sbjct: 309 V 309
>gi|9633651|ref|NP_051729.1| ribonucleotide reductase, small subunit [Myxoma virus]
gi|6523870|gb|AAF14903.1|AF170726_19 ribonucleotide reductase, small subunit [Myxoma virus]
gi|301134541|gb|ADK63655.1| M015L [Myxoma virus]
Length = 322
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +K +++ +++ EA ++E + E +P +G+N
Sbjct: 198 RDEGLHCDFACLMFKHLK-------HTPSEERVASIIKEAVVIEQRFLTEALPVRLIGMN 250
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G +F NPF +M E I L+ + NFFE RV++YQ+
Sbjct: 251 CELMCQYIEFVADRLIAELGYSKIF-SATNPFDFM-ENISLEGKTNFFEKRVSDYQRMGV 308
Query: 122 L 122
+
Sbjct: 309 V 309
>gi|290771185|emb|CAY80753.2| Rnr2p [Saccharomyces cerevisiae EC1118]
Length = 399
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K ++ EA +E Y + +P +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYKV-ENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381
Query: 122 LK 123
+
Sbjct: 382 MS 383
>gi|94495782|ref|ZP_01302361.1| ribonucleotide reductase beta subunit [Sphingomonas sp. SKA58]
gi|94424474|gb|EAT09496.1| ribonucleotide reductase beta subunit [Sphingomonas sp. SKA58]
Length = 350
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH + + + E L T + M + +E A+ G
Sbjct: 189 VRDETLHCEGIVRLFHAFVKERDCL-TASVKDDIMDMCQKTVRIEDAFVDLVFEMGPVPG 247
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ ++Y+++IA+ R Q+GL+P++ E+P PW++ +++ + NFFETR TEY +
Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRSTEYSKA 307
Query: 120 AE-LKW 124
A +W
Sbjct: 308 ATRGQW 313
>gi|190896546|gb|ACE96786.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRKKLSE-------ERVKGIVKDAVDIEREFVVDALPCALVGMN 170
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223
>gi|268575178|ref|XP_002642568.1| C. briggsae CBR-RNR-2 protein [Caenorhabditis briggsae]
gi|187023588|emb|CAP37241.1| CBR-RNR-2 protein [Caenorhabditis briggsae AF16]
Length = 365
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ K Q++ ++ +A +E + E +P +G+N
Sbjct: 240 RDEGLHRDFACLLYSMLQ-------NKLSQERIFEIIRDAVAIEQEFLTEALPVDMIGMN 292
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+ ++G + L+ +NPF +M E I + + NFFE RV+EYQ+
Sbjct: 293 CRLMSQYIEFVADHLLQELGCDKLYNV-KNPFDFM-ENISIDGKTNFFEKRVSEYQRPGV 350
Query: 122 L 122
+
Sbjct: 351 M 351
>gi|323347997|gb|EGA82256.1| Rnr2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 399
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K ++ EA +E Y + +P +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYKV-ENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381
Query: 122 LK 123
+
Sbjct: 382 MS 383
>gi|17974949|ref|NP_536463.1| C10L [Monkeypox virus Zaire-96-I-16]
gi|17529816|gb|AAL40494.1|AF380138_36 C10L [Monkeypox virus Zaire-96-I-16]
gi|51342196|gb|AAU01240.1| MPXV-WRAIR030 [Monkeypox virus]
gi|58220500|gb|AAW67788.1| MPXV-SL-030 [Monkeypox virus]
gi|59858836|gb|AAX09131.1| MPXV-COP-030 [Monkeypox virus]
gi|68448710|gb|AAY96833.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|68448912|gb|AAY97034.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|68449113|gb|AAY97234.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|68449313|gb|AAY97433.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|68449512|gb|AAY97631.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|300872658|gb|ADK39060.1| ribonucleotide reductase small subunit [Monkeypox virus]
Length = 319
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R ++ A +E + +P +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFLTVALPVKLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305
Query: 122 LK 123
+
Sbjct: 306 MS 307
>gi|6322434|ref|NP_012508.1| Rnr2p [Saccharomyces cerevisiae S288c]
gi|1172946|sp|P09938|RIR2_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 1;
AltName: Full=Ribonucleotide reductase R2 subunit 1;
AltName: Full=Ribonucleotide reductase small subunit 1
gi|52695523|pdb|1SMQ|A Chain A, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
From Saccharomyces Cerevisiae
gi|52695524|pdb|1SMQ|B Chain B, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
From Saccharomyces Cerevisiae
gi|52695525|pdb|1SMQ|C Chain C, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
From Saccharomyces Cerevisiae
gi|52695526|pdb|1SMQ|D Chain D, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
From Saccharomyces Cerevisiae
gi|172450|gb|AAA34988.1| ribonucleoside diphosphate reductase small subunit [Saccharomyces
cerevisiae]
gi|1008142|emb|CAA89317.1| RNR2 [Saccharomyces cerevisiae]
gi|285812874|tpg|DAA08772.1| TPA: Rnr2p [Saccharomyces cerevisiae S288c]
Length = 399
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K ++ EA +E Y + +P +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYKV-ENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381
Query: 122 LK 123
+
Sbjct: 382 MS 383
>gi|151945057|gb|EDN63308.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae YJM789]
gi|190409471|gb|EDV12736.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae RM11-1a]
gi|256271075|gb|EEU06176.1| Rnr2p [Saccharomyces cerevisiae JAY291]
Length = 399
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K ++ EA +E Y + +P +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYKV-ENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381
Query: 122 LK 123
+
Sbjct: 382 MS 383
>gi|323098642|gb|ADX22879.1| ribonucleotide reductase small subunit [Monkeypox virus]
Length = 319
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R ++ A +E + +P +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFLTVALPVKLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305
Query: 122 LK 123
+
Sbjct: 306 MS 307
>gi|18640273|ref|NP_570429.1| CMLV039 [Camelpox virus]
gi|18482949|gb|AAL73746.1|AF438165_36 ribonucleotide reductase small subunit [Camelpox virus M-96]
gi|19717972|gb|AAG37497.1| CMP39L [Camelpox virus CMS]
Length = 319
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ +++ +A +E + +P +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVISIITDAVSIEQEFLTVALPVKLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++G + ++ NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVI-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305
Query: 122 LK 123
+
Sbjct: 306 MS 307
>gi|172448|gb|AAA34987.1| ribonucleotide reductase subunit 2 (RNR2) [Saccharomyces
cerevisiae]
Length = 399
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K ++ EA +E Y + +P +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYKV-ENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381
Query: 122 LK 123
+
Sbjct: 382 MS 383
>gi|190896552|gb|ACE96789.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRKKLSE-------ERVKGIVKDAVDIEREFVVDALPCALVGMN 170
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223
>gi|190896550|gb|ACE96788.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRKKLSE-------ERVKGIVKDAVDIEREFVVDALPCALVGMN 170
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223
>gi|19113338|ref|NP_596546.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
pombe 972h-]
gi|9297110|sp|P36603|RIR2_SCHPO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|3378511|emb|CAA20100.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
pombe]
Length = 391
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +K + ++ ++ EA +E Y + +P +G+N
Sbjct: 261 RDEGLHTDFACLMFSHLK-------HRPGRKVVEAIIVEAVDIEKEYFTDALPVSLLGMN 313
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G + + T NPF +M E I L + NFFE +V++YQ
Sbjct: 314 KDLMCQYIEFVADRLLVALGNDKYYNVT-NPFDFM-ENISLAGKTNFFEKKVSDYQIAGV 371
Query: 122 LK 123
+
Sbjct: 372 MS 373
>gi|225010999|ref|ZP_03701465.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
MS024-3C]
gi|225004906|gb|EEG42862.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
MS024-3C]
Length = 328
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H ++ + + N HL K + + R +L +A +E + E++P +G+N
Sbjct: 199 RDEGMHCDYAVHLHNH------HLINKVPKARIREILVDALNIERTFITESLPASLIGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+ +R ++ E + + NPF +M +I L+ + NFFE RV+EYQ+
Sbjct: 253 AKLMTQYLEFVTDRLLVELQCEKEYNVS-NPFDFMD-MISLQGKTNFFEKRVSEYQKAGV 310
Query: 122 LKWD 125
L D
Sbjct: 311 LNKD 314
>gi|323098445|gb|ADX22683.1| ribonucleotide reductase small subunit [Monkeypox virus]
Length = 319
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R ++ A +E + +P +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFLTVALPVKLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQKMGV 305
Query: 122 LK 123
+
Sbjct: 306 MS 307
>gi|190896538|gb|ACE96782.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896548|gb|ACE96787.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896558|gb|ACE96792.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRKKLSE-------ERVKGIVKDAVDIEREFVVDALPCALVGMN 170
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223
>gi|207343947|gb|EDZ71248.1| YJL026Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 399
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K ++ EA +E Y + +P +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYKV-ENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381
Query: 122 LK 123
+
Sbjct: 382 MS 383
>gi|9631087|ref|NP_047757.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
MNPV]
gi|3822355|gb|AAC70306.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
MNPV]
Length = 348
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL + + R ++ +A +E + E +P +GLN
Sbjct: 224 RDEGLHCDFACLLFK-------HLVQRPSAARVREIVTDAVAIEQRFLTEALPVRLLGLN 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R ++ + T NP +M+ +I L+ + NFFE +V EYQ+
Sbjct: 277 CETMSQYIEFVADRLLLELVGAKHYN-TPNPLDFMN-LISLEGKTNFFEKKVGEYQKFGV 334
Query: 122 L 122
+
Sbjct: 335 M 335
>gi|302536805|ref|ZP_07289147.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
C]
gi|302445700|gb|EFL17516.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
C]
Length = 356
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H+NF +V++ ++ E P L+ QQ+ ML EA E+ + + G G+N
Sbjct: 230 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 289
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S +Y++ +A++R ++G P++ ++NPF +M E+ +++ NFFE R + YQ E
Sbjct: 290 TDSMREYLECVADQRLVRLGFPPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 347
Query: 122 LKWD 125
D
Sbjct: 348 GTVD 351
>gi|284039889|ref|YP_003389819.1| ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
gi|283819182|gb|ADB41020.1| Ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
Length = 349
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + H+ K + + ++ A +E + + +P +G+N
Sbjct: 200 RDEGLHRDFACMLY------TDHIVNKLPESQIYDIIRNAVEIEQEFVADALPVSLIGMN 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +QY+ F+A+ +GL ++ NPF +M +I L+ + NFFE RV EYQ+G
Sbjct: 254 AELMKQYIAFVADHLLVTLGLRKMYNVA-NPFDFMD-MISLQGKTNFFEKRVGEYQRGEV 311
Query: 122 LK 123
+
Sbjct: 312 MS 313
>gi|126322530|ref|XP_001380256.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 361
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 71/121 (58%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +L K +++ + ++ A +E + + +P G +G+N
Sbjct: 236 RDEGLHCDFACLMFH-------YLVNKPSEERVKEIIINAVEIEQEFLTDALPVGLIGIN 288
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +QY++F+A+R ++G +F ++NPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 289 STLMKQYIEFVADRLLVELGFSKVF-QSDNPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 346
Query: 122 L 122
+
Sbjct: 347 M 347
>gi|156102402|ref|XP_001616894.1| ribonucleoside-diphosphate reductase small chain [Plasmodium vivax
SaI-1]
gi|148805768|gb|EDL47167.1| ribonucleoside-diphosphate reductase small chain, putative
[Plasmodium vivax]
Length = 349
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + P + + ++ EA +E ++ E++P +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICESLPCDLIGMN 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G +F + +NPF WM +I L+ + NFFE RV +YQ+
Sbjct: 277 SRLMSQYIEFVADRLLECLGSPKIF-HAKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 334
Query: 122 L 122
+
Sbjct: 335 M 335
>gi|323308423|gb|EGA61668.1| Rnr2p [Saccharomyces cerevisiae FostersO]
Length = 399
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K ++ EA +E Y + +P +G+N
Sbjct: 271 RDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN 323
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R G + +K ENPF +M E I L + NFFE RV++YQ+
Sbjct: 324 ADLMNQYVEFVADRLLVAFGNKKYYKV-ENPFDFM-ENISLAGKTNFFEKRVSDYQKAGV 381
Query: 122 LK 123
+
Sbjct: 382 MS 383
>gi|281340156|gb|EFB15740.1| hypothetical protein PANDA_011632 [Ailuropoda melanoleuca]
Length = 336
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N
Sbjct: 211 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 263
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV EYQ+ A
Sbjct: 264 CVLMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVAEYQRFAV 321
Query: 122 L 122
+
Sbjct: 322 M 322
>gi|307295356|ref|ZP_07575195.1| Ribonucleoside-diphosphate reductase [Sphingobium chlorophenolicum
L-1]
gi|306878859|gb|EFN10078.1| Ribonucleoside-diphosphate reductase [Sphingobium chlorophenolicum
L-1]
Length = 351
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH I + + E L T + M + +E A+ G
Sbjct: 189 VRDETLHCEGIIRLFHAFVKERDCL-TASVKDDIMDMCQKTVRIEDAFIDLVFEMGPVPG 247
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ ++Y+++IA+ R Q+GL+P++ E+P PW++ +++ + NFFETR TEY +
Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRATEYSKA 307
Query: 120 AE-LKW 124
A +W
Sbjct: 308 ATRGQW 313
>gi|258511567|ref|YP_003185001.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478293|gb|ACV58612.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 369
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++ ++I ENP + T + +++ M+ A EIA+ VGL
Sbjct: 242 RDELTHLAIFRNLYHEIIRENPGIVTPDMEEEFVEMMRTAVQHEIAWGQYVTQGKIVGLT 301
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKE-KNFFETRVTEYQQG 119
+ Y++++AN R + L L+ E+P PWM + +FFE RVT Y +
Sbjct: 302 DALIDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTDFFEQRVTNYTKA 361
Query: 120 AELKWD 125
L WD
Sbjct: 362 GNLNWD 367
>gi|15896521|ref|NP_349870.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
acetobutylicum ATCC 824]
gi|15026352|gb|AAK81210.1|AE007823_4 Ribonucleotide reductase beta subunit [Clostridium acetobutylicum
ATCC 824]
gi|325510679|gb|ADZ22315.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
acetobutylicum EA 2018]
Length = 344
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I +++ E P ++T+E +++ + M+ EI + H + G+N
Sbjct: 218 RDENTHLWLFRNIIKELQKEEPDMFTEEIKKELKDMVKTGVENEITWGHYVIGDNIQGIN 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
E Y++++ NRR IG EP+++ Y ENP W+ D + +FFE + T Y +
Sbjct: 278 KKLIEDYIKYLGNRRLEAIGFEPIYEGYDENPALWVDIYADANSVKTDFFEAKSTAYAKA 337
Query: 120 AELKWD 125
+ L D
Sbjct: 338 STLVDD 343
>gi|103487260|ref|YP_616821.1| ribonucleotide-diphosphate reductase subunit beta [Sphingopyxis
alaskensis RB2256]
gi|98977337|gb|ABF53488.1| Ribonucleoside-diphosphate reductase [Sphingopyxis alaskensis
RB2256]
Length = 354
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDESLH I + + E L TK ++ + LE A+ G
Sbjct: 189 IRDESLHCEGIIKLFHAFTKERGCL-TKAVKEDIIDTCQKTVRLEDAFIDLAFEQGPVPG 247
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ ++Y+++IA+ R Q+G +P++ E+P PW++ +++ + NFFETR TEY +G
Sbjct: 248 MTPKEIKRYIRYIADWRLGQLGFQPIYMIDEHPLPWLAPLLNGVEHANFFETRATEYSKG 307
Query: 120 AE-LKW 124
A W
Sbjct: 308 ATRGDW 313
>gi|157953769|ref|YP_001498660.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
virus AR158]
gi|156068417|gb|ABU44124.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
virus AR158]
Length = 324
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 70/122 (57%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH FG + ++++ + P + + ++ EA E + + +P +G+N
Sbjct: 200 RDEGLHQQFGELMYSKLQNKLP-------FETVKQIITEAVENEKEFICDAIPCRLIGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G E ++ ++NPF +M E+I L+ + NFFE RV++YQ+
Sbjct: 253 SELMGQYIEFVADRIFIALGYEKVYN-SKNPFAFM-ELISLQGKTNFFEKRVSDYQRPGV 310
Query: 122 LK 123
+K
Sbjct: 311 MK 312
>gi|332045030|gb|EGI81223.1| Ribonucleoside-diphosphate reductase [Lacinutrix algicola 5H-3-7-4]
Length = 327
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + HL K +++ R +L +A +E + E++P +G+N
Sbjct: 199 RDEGMHCDFAVHL------HEHHLINKVPKERIREILVDALNIEREFITESLPVSLIGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+ + +G E + NPF +M +I L+ + NFFE RV+EYQ+
Sbjct: 253 SKLMSQYLEFVTDGLLQDLGCEKEYGTA-NPFDFMD-MISLQGKTNFFEKRVSEYQKAGV 310
Query: 122 LK 123
L
Sbjct: 311 LN 312
>gi|91215505|ref|ZP_01252476.1| probable ribonucleoside-diphosphate reductase small chain
[Psychroflexus torquis ATCC 700755]
gi|91186457|gb|EAS72829.1| probable ribonucleoside-diphosphate reductase small chain
[Psychroflexus torquis ATCC 700755]
Length = 326
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 69/122 (56%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + N+ HL + +++ R ++ +A +E + E++P +G+N
Sbjct: 198 RDEGVHCDFAVHLHNE------HLVNQVPKERIRAIIVDALTIEREFVTESLPVSLIGMN 251
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R ++G + + NPF +M +I L+ + NFFE RV EYQ+
Sbjct: 252 SNLMTQYLEFVADRLLFELGCDKEYGTA-NPFDFMD-MISLQGKTNFFEKRVGEYQKAGV 309
Query: 122 LK 123
+
Sbjct: 310 MN 311
>gi|157952945|ref|YP_001497837.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
virus NY2A]
gi|155123172|gb|ABT15040.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
virus NY2A]
Length = 324
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH FG + ++++ K + + ++ EA E + + +P +G+N
Sbjct: 200 RDEGLHQQFGELMYSKLQ-------NKLSFETIKQIIMEAVTNEKEFICDAIPCSMIGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R +G E ++ ++NPF +M E+I L+ + NFFE RV++YQ+
Sbjct: 253 ADLMNQYIEFVADRIFTALGYEKVYN-SKNPFAFM-ELISLEGKTNFFEKRVSDYQRPGV 310
Query: 122 LK 123
+
Sbjct: 311 MN 312
>gi|308490921|ref|XP_003107652.1| hypothetical protein CRE_13354 [Caenorhabditis remanei]
gi|308250521|gb|EFO94473.1| hypothetical protein CRE_13354 [Caenorhabditis remanei]
Length = 147
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ K Q++ ++ +A +E + E +P +G+N
Sbjct: 22 RDEGLHRDFACLLYSMLQ-------NKLTQERIFEIIKDAVCIEQEFLTEALPVDMIGMN 74
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+ ++G + L+ +NPF +M E I + + NFFE RV+EYQ+
Sbjct: 75 CRLMSQYIEFVADHLLAELGCDKLYNV-KNPFDFM-ENISIDGKTNFFEKRVSEYQRPGV 132
Query: 122 LK 123
+
Sbjct: 133 MS 134
>gi|20069937|ref|NP_613141.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
gi|20043331|gb|AAM09166.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
gi|33331769|gb|AAQ11077.1| putative ribonucleotide reductase small subunit-like protein
[Mamestra configurata NPV-A]
Length = 313
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F N E K +K M EA +E + + +P +G+N
Sbjct: 191 RDEGMHTDFACLYYNTRVKE------KLSYEKILDMFKEAVDIEKEFFTDALPVSLLGMN 244
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +Y++F+A+R Q+G + NPF +M+ I L+ + NFFE RV EY+
Sbjct: 245 ATMMCEYIEFVADRLLMQLGQPKYYN-ARNPFSFMNN-ISLEGKTNFFERRVGEYKMFGT 302
Query: 122 LKW 124
Sbjct: 303 GSD 305
>gi|260061082|ref|YP_003194162.1| putative ribonucleoside-diphosphate reductase small chain
[Robiginitalea biformata HTCC2501]
gi|88785214|gb|EAR16383.1| probable ribonucleoside-diphosphate reductase small chain
[Robiginitalea biformata HTCC2501]
Length = 328
Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 67/122 (54%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H ++ + + N HL K +++ ++ A +E + E++P +G+N
Sbjct: 199 RDEGMHCDYAVHL------HNNHLVNKVPKERITQIITNALDIEREFITESLPVSLIGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+ +R ++ E ++ + NPF +M +I L+ + NFFE RV+EYQ+
Sbjct: 253 AKLMTQYLEFVTDRLLVELECEKVYN-STNPFDFMD-MISLQGKTNFFEKRVSEYQKAGV 310
Query: 122 LK 123
+
Sbjct: 311 MN 312
>gi|332031690|gb|EGI71130.1| Ribonucleoside-diphosphate reductase subunit M2 [Acromyrmex
echinatior]
Length = 210
Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + H+ K ++ ++++ +A +E + + +P +G+N
Sbjct: 81 RDEGLHCDFACLMFK-------HIVQKPSFERVKSIVMDAVEIEKEFLTQALPVELIGMN 133
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
Y++F+A+R +G E ++ +ENPF +M I + + NFFE +V EY++
Sbjct: 134 RTFMCNYIEFVADRLFVALGFEKVYN-SENPFSFMD-FISMMGKTNFFEKKVGEYKKFGV 191
Query: 122 LKWD 125
++ D
Sbjct: 192 MEED 195
>gi|85375147|ref|YP_459209.1| ribonucleotide-diphosphate reductase subunit beta [Erythrobacter
litoralis HTCC2594]
gi|84788230|gb|ABC64412.1| ribonucleotide reductase beta subunit [Erythrobacter litoralis
HTCC2594]
Length = 356
Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDESLH + + ++ E +TK ++ + ++ LE + G
Sbjct: 189 VRDESLHCEGIVRLFHEFVRER-DCYTKAVKEDIIDICQKSVRLEDNFIDLAFEMGPVSG 247
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ ++Y+++IA+ R Q+GL+P++ ++P PW++ +++ + NFFE R TEY +G
Sbjct: 248 MTPKEIKKYIRYIADWRLGQLGLQPIYMVDDHPLPWLAPLLNGVEHANFFEQRATEYSKG 307
Query: 120 AE-LKW 124
A W
Sbjct: 308 ATKGNW 313
>gi|254456975|ref|ZP_05070403.1| ribonucleoside-diphosphate reductase, beta subunit
[Campylobacterales bacterium GD 1]
gi|207085767|gb|EDZ63051.1| ribonucleoside-diphosphate reductase, beta subunit
[Campylobacterales bacterium GD 1]
Length = 340
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E P L+T + +++ M EA LE + +GL
Sbjct: 215 RDEVTHLVLFQNLINTLRKERPDLFTDKLKEEVIAMFKEAVQLESEWGKYITQGQILGLT 274
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
EQY++F+A+ R +G E L+ T NP W+ + ++ NFFE VT Y +G+
Sbjct: 275 NDIVEQYIKFLADERLTAVGFEKLYNVT-NPIKWVDDFAKFNDQKTNFFEGTVTNYSKGS 333
Query: 121 ELKWD 125
L +D
Sbjct: 334 -LTFD 337
>gi|294013210|ref|YP_003546670.1| ribonucleoside-diphosphate reductase beta chain [Sphingobium
japonicum UT26S]
gi|292676540|dbj|BAI98058.1| ribonucleoside-diphosphate reductase beta chain [Sphingobium
japonicum UT26S]
Length = 351
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH + + + E L T + M + +E A+ G
Sbjct: 189 VRDETLHCEGIVRLFHAFVKERDCL-TASVKDDIMDMCQKTVRIEDAFVDLVFEMGPVPG 247
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ ++Y+++IA+ R Q+GL+P++ E+P PW++ +++ + NFFETR TEY +
Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRATEYSKA 307
Query: 120 AE-LKW 124
A +W
Sbjct: 308 ATRGQW 313
>gi|256785295|ref|ZP_05523726.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
lividans TK24]
gi|289769189|ref|ZP_06528567.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
lividans TK24]
gi|289699388|gb|EFD66817.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
lividans TK24]
Length = 343
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H++F DV++ ++ E P L+ + +++ ML EA E+ +A + G G+N
Sbjct: 217 RDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDMLREAVEAELQFARDLCGDGLPGMN 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E
Sbjct: 277 TDSMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 334
Query: 122 LKWD 125
D
Sbjct: 335 GTVD 338
>gi|254388985|ref|ZP_05004216.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
clavuligerus ATCC 27064]
gi|294814921|ref|ZP_06773564.1| Ribonucleoside-diphosphate reductase beta chain protein
[Streptomyces clavuligerus ATCC 27064]
gi|326443293|ref|ZP_08218027.1| Ribonucleoside-diphosphate reductase [Streptomyces clavuligerus
ATCC 27064]
gi|197702703|gb|EDY48515.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
clavuligerus ATCC 27064]
gi|218078699|emb|CAB90708.3| class Ia ribonucleotide-diphosphate reductase small subunit chain
[Streptomyces clavuligerus ATCC 27064]
gi|294327520|gb|EFG09163.1| Ribonucleoside-diphosphate reductase beta chain protein
[Streptomyces clavuligerus ATCC 27064]
Length = 339
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H+NF +V++ ++ E P L+ QQ+ ML EA E+ ++ + G G+N
Sbjct: 213 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVEAELQFSRDLCGDGLPGMN 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S +Y+Q +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E
Sbjct: 273 TESMREYLQCVADQRLARLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 330
Query: 122 LKWD 125
D
Sbjct: 331 GSVD 334
>gi|21223593|ref|NP_629372.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
coelicolor A3(2)]
gi|7328345|emb|CAB82486.1| class I ribonucleotide-diphosphate reductase small subunit chain
[Streptomyces coelicolor A3(2)]
gi|8546891|emb|CAB94610.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
coelicolor A3(2)]
Length = 343
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H++F DV++ ++ E P L+ + +++ ML EA E+ +A + G G+N
Sbjct: 217 RDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDMLREAVEAELQFARDLCGDGLPGMN 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E
Sbjct: 277 TDSMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 334
Query: 122 LKWD 125
D
Sbjct: 335 GTVD 338
>gi|297449|emb|CAA46231.1| ribonucleotide reductase, small subunit [Schizosaccharomyces pombe]
gi|447147|prf||1913428B ribonucleotide reductase:SUBUNIT=small
Length = 391
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +K + ++ + ++ EA +E Y + +P +G+N
Sbjct: 261 RDEGLHTDFACLMFSHLK-------HRPGRKLLKPIIVEAVDIEKEYFTDALPVSLLGMN 313
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G + + T NPF +M E I L + NFFE +V++YQ
Sbjct: 314 KDLMCQYIEFVADRLLVALGNDKYYNVT-NPFDFM-ENISLAGKTNFFEKKVSDYQIAGV 371
Query: 122 LK 123
+
Sbjct: 372 MS 373
>gi|239982206|ref|ZP_04704730.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
albus J1074]
gi|291454052|ref|ZP_06593442.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
albus J1074]
gi|291357001|gb|EFE83903.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
albus J1074]
Length = 350
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 76/126 (60%), Gaps = 4/126 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H++F DV++ ++ E P L+ + Q++ ML EA E+ +A + G G+N
Sbjct: 224 RDETMHMSFAFDVVDTVRKEEPELFDDKLQEQVVAMLKEAVEAELQFARDLCGDGLPGMN 283
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
S +Y++ +A++R ++G P++ ++NPF +M E+ +++ NFFE RV+ YQ
Sbjct: 284 TESMREYLECVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRVSAYQVAVE 341
Query: 120 AELKWD 125
+ +D
Sbjct: 342 GTVSFD 347
>gi|311743885|ref|ZP_07717691.1| ribonucleotide-diphosphate reductase beta subunit [Aeromicrobium
marinum DSM 15272]
gi|311313015|gb|EFQ82926.1| ribonucleotide-diphosphate reductase beta subunit [Aeromicrobium
marinum DSM 15272]
Length = 357
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 1/123 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLHL FGI++I + ENP + T EF + + M+ +A +E AY + +P G +GL
Sbjct: 236 VRDESLHLKFGINLILTVLEENPEVATAEFAAEIQQMVLDAVEMEEAYNRDLLPGGILGL 295
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
NA QY++++A+RR ++G P + NP WM+ D + NFFE T Y+ A
Sbjct: 296 NADYINQYVRYLADRRLEELGFGPHYG-ATNPAKWMATANDTLQLVNFFEATNTSYEVNA 354
Query: 121 ELK 123
+L
Sbjct: 355 KLT 357
>gi|308809930|ref|XP_003082274.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
tauri]
gi|116060742|emb|CAL57220.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
tauri]
Length = 382
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + ++ + ++ +A +E + + + VG+N
Sbjct: 256 RDEGLHCDFACLLYGMLQ-------NPLSEATLHHIVGDAVKIEKEFVCDALSCSLVGMN 308
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A Y++F+A+R Q+G LF NPF WM E+I L+ + NFFE RV +YQ+
Sbjct: 309 ADMMSTYIEFVADRLLIQLGASKLFNAV-NPFDWM-ELISLQGKANFFEHRVDQYQKAGV 366
Query: 122 L 122
+
Sbjct: 367 M 367
>gi|332185556|ref|ZP_08387304.1| ribonucleotide reductase, small chain family protein [Sphingomonas
sp. S17]
gi|332014534|gb|EGI56591.1| ribonucleotide reductase, small chain family protein [Sphingomonas
sp. S17]
Length = 351
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDESLH I + + E TK + LE + G
Sbjct: 189 VRDESLHCEGIIQLFHAFTKER-QCLTKAVKDDIADQCQTTVRLEDNFIDLAFEMGPVNG 247
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ A ++Y+++IA+ R Q+GL+P++ E+P PW++ +++ + NFFETR TEY +
Sbjct: 248 MTAKDIKKYIRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANFFETRATEYSKA 307
Query: 120 AE-LKW 124
A +W
Sbjct: 308 ATRGQW 313
>gi|308485547|ref|XP_003104972.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
gi|308257293|gb|EFP01246.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
Length = 323
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 9/123 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +I K ++ ++ EA +E+ + + +P +G+N
Sbjct: 198 RDEGLHRDFACLLFTKIV-------DKPSREIVCEIVDEAVTIELEFLDQALPVNVIGMN 250
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++++A+ ++G E L+ +T NPF +M E I + + NFFE RV+EYQ+
Sbjct: 251 YTLMSQYIKYVADHLLEELGFEKLY-HTINPFDFM-ENISIDGKTNFFEKRVSEYQRSGV 308
Query: 122 LKW 124
+
Sbjct: 309 MAD 311
>gi|190896518|gb|ACE96772.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRKKLSE-------ERVKGIVKDAVDIEREFVVDALPCALVGMN 170
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYYVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223
>gi|85710107|ref|ZP_01041172.1| ribonucleotide reductase beta subunit [Erythrobacter sp. NAP1]
gi|85688817|gb|EAQ28821.1| ribonucleotide reductase beta subunit [Erythrobacter sp. NAP1]
Length = 346
Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH I + + E L TK ++ + + LE A+ G
Sbjct: 189 VRDETLHCEGIIKMFHTFCEERDCL-TKAVKEDIIDICQKTVRLEDAFIDLAFEMGPVEG 247
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ A ++Y+++IA+ R Q+ L+P++ E+P PW+S +++ + NFFE R TEY +G
Sbjct: 248 MTAKDIKKYIRYIADWRLGQLNLQPIYMIDEHPLPWLSPLLNGVEHANFFEARATEYSKG 307
Query: 120 AE-LKW 124
A W
Sbjct: 308 ATKGNW 313
>gi|326386063|ref|ZP_08207687.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
nitrogenifigens DSM 19370]
gi|326209288|gb|EGD60081.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
nitrogenifigens DSM 19370]
Length = 351
Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDE+LH + E TK ++ + LE A+ G
Sbjct: 189 VRDETLHCEGITRLFQAFVQER-DCMTKAVREDIIDCCQKTVRLEDAFIDLAFEQGPVPG 247
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
++A ++Y+++IA+ R Q+G +P++ E+P PW++ +++ + NFFETR TEY +
Sbjct: 248 MSAKEIKRYIRYIADWRLGQLGFQPIYMIEEHPLPWLTPLLNGVEHANFFETRATEYSKA 307
Query: 120 AE-LKW 124
A W
Sbjct: 308 ATRGNW 313
>gi|292397811|ref|YP_003517877.1| RR2b [Lymantria xylina MNPV]
gi|291065528|gb|ADD73846.1| RR2b [Lymantria xylina MNPV]
Length = 338
Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL + + R ++ +A +E + E +P +GLN
Sbjct: 214 RDEGLHCDFACLMFK-------HLVQRPSAARVREIVTDAVAIEQRFLTEALPVRLLGLN 266
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R + + NP +M+ +I L+ + NFFE +V EYQ+
Sbjct: 267 CETMSQYIEFVADRLLVDLIGTKHYNTA-NPLDFMT-LISLEGKTNFFEKKVGEYQKFGV 324
Query: 122 L--KWD 125
+ K D
Sbjct: 325 MFAKDD 330
>gi|82538850|ref|XP_723858.1| ribonucleotide reductase small chain [Plasmodium yoelii yoelii str.
17XNL]
gi|145580416|pdb|2P1I|A Chain A, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580417|pdb|2P1I|B Chain B, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580418|pdb|2P1I|C Chain C, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580419|pdb|2P1I|D Chain D, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580420|pdb|2P1I|E Chain E, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580421|pdb|2P1I|F Chain F, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580422|pdb|2P1I|G Chain G, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580423|pdb|2P1I|H Chain H, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|23478298|gb|EAA15423.1| Ribonucleotide reductase, small chain [Plasmodium yoelii yoelii]
Length = 349
Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + P + ++ EA +E ++ E++P +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLENKLPE-------NVVQNIVKEAVEVERSFICESLPCDLIGMN 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G +F +++NPF WM +I L+ + NFFE RV +YQ+
Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKVF-HSKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 334
Query: 122 L 122
+
Sbjct: 335 M 335
>gi|66475262|ref|XP_627447.1| ribonucleotide reductase small subunit, duplicated adjacent gene
[Cryptosporidium parvum Iowa II]
gi|9652154|gb|AAF91416.1|AF275635_1 ribonucleotide reductase R2 subunit [Cryptosporidium parvum]
gi|46228920|gb|EAK89769.1| ribonucleotide reductase small subunit, duplicated adjacent gene
[Cryptosporidium parvum Iowa II]
Length = 352
Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +K + P + + ++ EA +E + +++P +G+N
Sbjct: 227 RDEGLHADFACLIYKALKFKLP-------APRVQQIISEAVEVERNFLCDSLPVDLIGMN 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R + + ++ + NPF WM +I L+ + NFFE RV EYQ
Sbjct: 280 SRLMAQYIEFVADRLLFALDIPKIYNVS-NPFDWMD-LISLQGKTNFFEKRVGEYQMAGV 337
Query: 122 L 122
+
Sbjct: 338 M 338
>gi|66822029|ref|XP_644369.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
AX4]
gi|66823381|ref|XP_645045.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
AX4]
gi|41019487|sp|P42521|RIR2_DICDI RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|29611978|gb|AAB72227.2| ribonucleotide reductase small subunit [Dictyostelium discoideum]
gi|60472492|gb|EAL70444.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
AX4]
gi|60472997|gb|EAL70945.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
AX4]
Length = 338
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +++ + + M+ +A E + E++P +G+N
Sbjct: 206 RDEGLHCDFACLLYTKLQRKLD-------PKVIEKMIRDAVECEKEFICESLPVDLIGMN 258
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ S QY++F A+R +G + +F + NPF WM E+I L+++ NFFE +V EY +
Sbjct: 259 SRSMSQYIEFCADRLVVSLGYKKIFN-SSNPFEWM-EMISLQRKSNFFEGKVAEYAKTGV 316
>gi|218289144|ref|ZP_03493380.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
acidocaldarius LAA1]
gi|218240727|gb|EED07906.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
acidocaldarius LAA1]
Length = 345
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++ ++I ENP + T + +++ M+ A EIA+ VGL
Sbjct: 218 RDELTHLAIFRNLYHEIVRENPGIVTPDMEEEFVEMMRTAVQHEIAWGQYVTQGKIVGLT 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKE-KNFFETRVTEYQQG 119
+ Y++++AN R + L L+ E+P PWM + +FFE RVT Y +
Sbjct: 278 DALIDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTDFFEQRVTNYTKA 337
Query: 120 AELKWD 125
L WD
Sbjct: 338 GNLNWD 343
>gi|83649535|ref|YP_437970.1| ribonucleotide reductase subunit beta [Hahella chejuensis KCTC
2396]
gi|83637578|gb|ABC33545.1| Ribonucleotide reductase, beta subunit [Hahella chejuensis KCTC
2396]
Length = 405
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 52/124 (41%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
MRDE +H FGI V+ QI E + +T+ EA E YAH + + +G
Sbjct: 285 MRDEVMHCAFGIRVVKQIIKEEG---VTLDPKAIKTLWEEAEAAETGYAHFLLKEPILGY 341
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
A + +FIANRR Q+ L+ F N PW+ E ++KEKNFFETRVTEYQ GA
Sbjct: 342 TAEDHIEQFRFIANRRAKQLKLDEPFPGAGNALPWLDEQASMRKEKNFFETRVTEYQTGA 401
Query: 121 ELKW 124
L+W
Sbjct: 402 SLQW 405
>gi|187607401|ref|NP_001119973.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus (Silurana)
tropicalis]
gi|165971068|gb|AAI58191.1| LOC100144925 protein [Xenopus (Silurana) tropicalis]
Length = 346
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + K +++ ++ A +E + E +P +G+N
Sbjct: 221 RDEGLHTDFACLMFHYLVK-------KPTEERVTEIIVNAVRIEQEFLTEALPVSLIGMN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F+A+R ++G FK ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 274 CTLMKTYIEFVADRLLVELGCSKAFK-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFAV 331
Query: 122 L 122
+
Sbjct: 332 M 332
>gi|297202281|ref|ZP_06919678.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sviceus ATCC 29083]
gi|197710199|gb|EDY54233.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sviceus ATCC 29083]
Length = 340
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H++F DV++ ++ E P L+ QQ+ ML EA E+ +A + G G+N
Sbjct: 214 RDETMHMSFAFDVVDTVRKEEPELFDDRLQQQVTDMLAEAVEAELQFARDLCGDGLPGMN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E
Sbjct: 274 TESMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331
Query: 122 LKWD 125
D
Sbjct: 332 GTVD 335
>gi|308490981|ref|XP_003107682.1| CRE-RNR-2 protein [Caenorhabditis remanei]
gi|308250551|gb|EFO94503.1| CRE-RNR-2 protein [Caenorhabditis remanei]
Length = 377
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ K Q++ ++ +A +E + E +P +G+N
Sbjct: 252 RDEGLHRDFACLLYSMLQ-------NKLTQERIFEIIRDAVCIEQEFLTEALPVDMIGMN 304
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+ ++G + L+ +NPF +M E I + + NFFE RV+EYQ+
Sbjct: 305 CRLMSQYIEFVADHLLAELGCDKLYNV-KNPFDFM-ENISIDGKTNFFEKRVSEYQRPGV 362
Query: 122 LK 123
+
Sbjct: 363 MS 364
>gi|297157411|gb|ADI07123.1| ribonucleoside-diphosphate reductase [Streptomyces bingchenggensis
BCW-1]
Length = 340
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 76/126 (60%), Gaps = 4/126 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H+NF V++ ++ E P L+ E QQ+ ML EA E+ +A + +G G+N
Sbjct: 214 RDETMHMNFAFQVVDTVREEEPELFDDELQQQVTDMLREAVEAELQFARDLCGEGLPGMN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
S QY++ +A++R ++G P++ +ENPF +M E+ ++++ NFFE R + YQ
Sbjct: 274 TESMRQYLECVADQRLARLGFAPVYG-SENPFSFM-ELQNVQELTNFFERRASAYQVAVE 331
Query: 120 AELKWD 125
+ +D
Sbjct: 332 GSVSFD 337
>gi|213402763|ref|XP_002172154.1| ribonucleoside-diphosphate reductase small chain
[Schizosaccharomyces japonicus yFS275]
gi|212000201|gb|EEB05861.1| ribonucleoside-diphosphate reductase small chain
[Schizosaccharomyces japonicus yFS275]
Length = 392
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + +K + ++ ++ EA +E Y + +P +G+N
Sbjct: 263 RDEGVHTDFACLMFSHLK-------HRPGKKVVERIIIEAVNIEKEYFTDALPVYLLGMN 315
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R +G E + T NPF +M E I L + NFFE +V++YQ
Sbjct: 316 CDLMCQYIEFVADRLLLSLGNEKYYNVT-NPFDFM-ENISLAGKTNFFEKKVSDYQIAGV 373
Query: 122 L 122
+
Sbjct: 374 M 374
>gi|17158292|ref|NP_477710.1| wsv188 [Shrimp white spot syndrome virus]
gi|14189948|gb|AAK55515.1|AF267731_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
virus]
gi|15021490|gb|AAK77767.1|AF369029_98 ORF98, putative ribonucleotide reductase small subunit (RR2)
[shrimp white spot syndrome virus]
gi|17016586|gb|AAL33192.1| wsv188 [shrimp white spot syndrome virus]
gi|19481835|gb|AAL89111.1| WSSV243 [shrimp white spot syndrome virus]
Length = 413
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 8/121 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F ++ + ++ P +++ ++ EA +E + ++P VG+N
Sbjct: 250 RDEGLHRDFACMLLKKGFVDTP------SRERILEIVTEAVRIEQEFLTVSLPVKLVGMN 303
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A++ ++GLE + T NPFP+M I L+ + NFFE RV EYQ+
Sbjct: 304 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN-ISLENKTNFFEKRVAEYQRAQV 361
Query: 122 L 122
+
Sbjct: 362 M 362
>gi|254293199|ref|YP_003059222.1| ribonucleotide-diphosphate reductase subunit beta [Hirschia baltica
ATCC 49814]
gi|254041730|gb|ACT58525.1| Ribonucleoside-diphosphate reductase [Hirschia baltica ATCC 49814]
Length = 345
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDESLH + + + E L TK + LE + G
Sbjct: 198 VRDESLHCEGMMKMFHTYAEETGAL-TKTVKDDITDCCQTVVKLEDKFIDLAFEAGEVEG 256
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ + Y+++IA+ R Q+ L+P++ E+P PW++E+++ + NFFE R TEY +G
Sbjct: 257 MTPEDIKNYIRYIADWRLKQLKLDPVYGVDEHPIPWLTEILNGVEHANFFEARATEYSKG 316
Query: 120 A-ELKW 124
A W
Sbjct: 317 ATAGDW 322
>gi|87198296|ref|YP_495553.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
aromaticivorans DSM 12444]
gi|87133977|gb|ABD24719.1| Ribonucleoside-diphosphate reductase [Novosphingobium
aromaticivorans DSM 12444]
Length = 351
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDESLH + + E L TK ++ + LE A+ G
Sbjct: 189 VRDESLHCEGITRLFHAFVKERGCL-TKAVKEDIIDCCQKTVRLEDAFIDLAFEQGPVPG 247
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
++A ++Y+++IA+ R Q+GL ++ ++P PW++ +++ + NFFETR TEY +
Sbjct: 248 MSAKEIKRYIRYIADWRLSQLGLPAIYMIEDHPLPWLAPLLNGVEHANFFETRATEYSKA 307
Query: 120 AE-LKW 124
A W
Sbjct: 308 ATKGDW 313
>gi|88856487|ref|ZP_01131145.1| ribonucleotide-diphosphate reductase beta subunit [marine
actinobacterium PHSC20C1]
gi|88814354|gb|EAR24218.1| ribonucleotide-diphosphate reductase beta subunit [marine
actinobacterium PHSC20C1]
Length = 332
Score = 113 bits (284), Expect = 5e-24, Method: Composition-based stats.
Identities = 51/116 (43%), Positives = 75/116 (64%), Gaps = 1/116 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLHL FGI++I + ENP + T+EF + R M+ +A +E AY H+ +P G +GL
Sbjct: 205 VRDESLHLKFGINLILTVLEENPEIQTEEFADEIRQMILDAVEMEEAYNHDLLPGGILGL 264
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
NA QY++++A+RR ++G EP +K T NP WM+ D + NFFE+ T Y
Sbjct: 265 NANYINQYVKYLADRRLEELGFEPHYKVT-NPAKWMATANDTLELVNFFESTNTSY 319
>gi|239929012|ref|ZP_04685965.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
ghanaensis ATCC 14672]
Length = 339
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H++F DV++ ++ E P L+ + Q+ ML EA E+ +A + G G+N
Sbjct: 213 RDETMHMSFAFDVVDTVRKEEPELFDERLGQQVTDMLREAVEAELQFARDLCGDGLPGMN 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S QY++ +A++R ++G P++ ++NPF +M E+ +++ NFFE R + YQ E
Sbjct: 273 TESMRQYLECVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 330
Query: 122 LKWD 125
D
Sbjct: 331 GTVD 334
>gi|153814165|ref|ZP_01966833.1| hypothetical protein RUMTOR_00374 [Ruminococcus torques ATCC 27756]
gi|317499963|ref|ZP_07958199.1| ribonucleoside-diphosphate reductase [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087814|ref|ZP_08336739.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
bacterium 3_1_46FAA]
gi|145848561|gb|EDK25479.1| hypothetical protein RUMTOR_00374 [Ruminococcus torques ATCC 27756]
gi|316898680|gb|EFV20715.1| ribonucleoside-diphosphate reductase [Lachnospiraceae bacterium
8_1_57FAA]
gi|330409509|gb|EGG88950.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
bacterium 3_1_46FAA]
Length = 353
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I +++ E+P L+ + + +L EA EI +A + GLN
Sbjct: 225 RDENTHLWLFRNIIIELRKEHPELFDDHMVSEMKELLMEAVRQEIEWACYVIGNEVPGLN 284
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N R +G P++ E W+S+ + + +FFE R T Y
Sbjct: 285 EKMITDYIRYLGNLRWKSLGYAPIYPGCEREPETMKWVSQYSNANMVKTDFFEARSTAYA 344
Query: 118 QGAELKWD 125
+ L D
Sbjct: 345 KSTALIDD 352
>gi|325286576|ref|YP_004262366.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
gi|324322030|gb|ADY29495.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
Length = 328
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H ++ + + N HL K +++ +L +A +E + E++P +G+N
Sbjct: 199 RDEGMHCDYAVHLHNH------HLINKVPKERITEILVDALDIEREFITESLPVSLIGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+ +R ++ + ++ + NPF +M +I L+ + NFFE RV EYQ+
Sbjct: 253 SKLMTQYLEFVTDRLLVELNCDKVYN-STNPFDFMD-MISLQGKTNFFEKRVAEYQKSGV 310
Query: 122 LK 123
Sbjct: 311 AN 312
>gi|190896526|gb|ACE96776.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ +A +E + + +P VG+N
Sbjct: 118 RDEGLHCDFACLLYSLLRKKLSE-------ERVKGIVKDAVDIEREFVVDALPCALVGMN 170
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
QY++F+A+R +G ++ NPF M E+I L+ + NFFE RV EY
Sbjct: 171 GELMSQYIEFVADRLLGALGCGKVYYVA-NPFDGM-ELISLQGKTNFFEKRVGEY 223
>gi|45268714|dbj|BAD12266.1| p53-inducible ribonucleotide reductase small subunit 2 short form
gamma [Homo sapiens]
Length = 139
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 9/120 (7%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DE LH +F + +L K +++ R ++ +A +E + E +P G +G+N
Sbjct: 15 DEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNC 67
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV+EYQ+ A +
Sbjct: 68 ILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAVM 125
>gi|256391238|ref|YP_003112802.1| ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
44928]
gi|256357464|gb|ACU70961.1| Ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
44928]
Length = 331
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 4/126 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES+H+ F DV++ ++ E P L+ ++ Q+ R ML EA E +A + + G GL
Sbjct: 205 RDESMHMAFAFDVVDTVRAEEPDLFDEKMAQQVREMLAEAVECETQFAGDLLGGGVSGLP 264
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ--QG 119
Y++ +A+RR Q+GLEP++ NP +M E+ D+++ NFFE RV+ YQ G
Sbjct: 265 VADMRAYLEHVADRRLEQLGLEPMYGTA-NPLGFM-ELQDVQELSNFFERRVSAYQVAVG 322
Query: 120 AELKWD 125
+ +D
Sbjct: 323 GSVSFD 328
>gi|1710399|sp|P50649|RIR2_PLAFG RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
AltName: Full=Ribonucleotide reductase R2 subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|349790|gb|AAA29754.1| ribonucleotide reductase R2 subunit [Plasmodium falciparum]
Length = 322
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 66/121 (54%), Gaps = 7/121 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + + + P + +++ + E ++ E++P +G+N
Sbjct: 195 RDEGLHTDFNCLIYSLLDNKLPEQMVQNIVKEAGGVEVE-----KSFICESLPCDLIGMN 249
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G +F +++NPF WM +I L+ + NFFE RV +YQ+
Sbjct: 250 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 307
Query: 122 L 122
+
Sbjct: 308 M 308
>gi|221060582|ref|XP_002260936.1| ribonucleotide reductase small subunit [Plasmodium knowlesi strain
H]
gi|193811010|emb|CAQ42908.1| ribonucleotide reductase small subunit,putative [Plasmodium
knowlesi strain H]
Length = 349
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + P + + ++ EA +E ++ E++P +G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICESLPCDLIGMN 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G +F + +NPF WM +I L+ + NFFE RV +YQ+
Sbjct: 277 SRLMSQYIEFVADRLLECLGSRKIF-HAKNPFNWMD-LISLQGKTNFFEKRVADYQKSGV 334
Query: 122 L 122
+
Sbjct: 335 M 335
>gi|302558498|ref|ZP_07310840.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
griseoflavus Tu4000]
gi|302476116|gb|EFL39209.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
griseoflavus Tu4000]
Length = 341
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H++F DV++ ++ E P L+ ++ Q+ ML EA E+ +A + G G+N
Sbjct: 215 RDETMHMSFAFDVVDTVRKEEPELFDEQLGQQVTAMLREAVEAELQFARDLCGDGLPGMN 274
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E
Sbjct: 275 TESMRQYLECVADQRLVRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 332
Query: 122 LKWD 125
D
Sbjct: 333 GTVD 336
>gi|290957506|ref|YP_003488688.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
scabiei 87.22]
gi|260647032|emb|CBG70131.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
scabiei 87.22]
Length = 355
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H++F +V++ ++ E P L+ + +Q+ ML EA E+ + + G G+N
Sbjct: 229 RDETMHMSFAFEVVDTVRKEEPELFDELLRQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 288
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S QY++ +A++R ++G P++ ++NPF +M E+ +++ NFFE R + YQ E
Sbjct: 289 TESMRQYLECVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 346
Query: 122 LKWD 125
D
Sbjct: 347 GTVD 350
>gi|7672989|gb|AAF66689.1|AF144620_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
virus]
Length = 413
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 8/121 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F ++ + ++ P +++ ++ EA +E + ++P VG+N
Sbjct: 250 RDEGLHRDFACMLLKKGFVDTP------SRERILEIVTEAVRIEQEFLTVSLPVKLVGMN 303
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A++ ++GLE + T NPFP+M I L+ + NFFE RV EYQ+
Sbjct: 304 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN-ISLENKTNFFEKRVAEYQRAQV 361
Query: 122 L 122
+
Sbjct: 362 M 362
>gi|291437353|ref|ZP_06576743.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
ghanaensis ATCC 14672]
gi|291340248|gb|EFE67204.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
ghanaensis ATCC 14672]
Length = 340
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H++F DV++ ++ E P L+ + Q+ ML EA E+ +A + G G+N
Sbjct: 214 RDETMHMSFAFDVVDTVRKEEPELFDERLGQQVTDMLREAVEAELQFARDLCGDGLPGMN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S QY++ +A++R ++G P++ ++NPF +M E+ +++ NFFE R + YQ E
Sbjct: 274 TESMRQYLECVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331
Query: 122 LKWD 125
D
Sbjct: 332 GTVD 335
>gi|294631326|ref|ZP_06709886.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. e14]
gi|292834659|gb|EFF93008.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. e14]
Length = 339
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H++F DV++ ++ E P L+ + +Q+ ML EA E+ +A + G G+N
Sbjct: 213 RDETMHMSFAFDVVDTVRKEEPDLFDDQLEQQVTDMLREAVEAELQFARDLCGDGLPGMN 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E
Sbjct: 273 TDSMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 330
Query: 122 LKWD 125
D
Sbjct: 331 GTVD 334
>gi|68161126|gb|AAY86994.1| ribonucleotide reductase M2b [Ictalurus punctatus]
Length = 192
Score = 113 bits (283), Expect = 7e-24, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH NF + +Q++ K + + ++ +A +E + E +P +G+N
Sbjct: 88 RDEGLHCNFACLIYSQLQK-------KPSADRVKDIITKAVRIEQEFLTEALPVDLIGIN 140
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
+ +QY++F+A+R +G+ +++ ENPF +M E I L+ + NFFE RV E
Sbjct: 141 SYLMKQYIEFVADRLLTDLGIPKVYE-AENPFDFM-EFISLEGKTNFFEKRVAE 192
>gi|299472857|emb|CBN80426.1| EsV-1-128 [Ectocarpus siliculosus]
Length = 419
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH + + ++ + P Q++ + A +E + +P +G++
Sbjct: 294 RDEGLHATASVLIYKHLRNKLP-------QERVHEIFEHAVSVECEFISSALPVALIGIS 346
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S +Y++F+A+ +Q+G + ++ NPF WM +I L+ + NFFE RV EY +
Sbjct: 347 EKSMTEYIKFVADYWLNQLGYDKVYNCA-NPFEWMD-MISLQGKTNFFENRVAEYSKPGV 404
Query: 122 LKW 124
L
Sbjct: 405 LLD 407
>gi|148554425|ref|YP_001262007.1| ribonucleotide-diphosphate reductase subunit beta [Sphingomonas
wittichii RW1]
gi|148499615|gb|ABQ67869.1| Ribonucleoside-diphosphate reductase [Sphingomonas wittichii RW1]
Length = 350
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH + + + E L T + M + +E A+ G
Sbjct: 189 IRDETLHCEGIVRLFHAFVKERDCL-TASVKDDILDMCQKTVRIEDAFIDLVFEMGPVNG 247
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ ++Y+++IA+ R Q+GL+P++ ++P PW++ +++ + NFFETR TEY +
Sbjct: 248 MTPKDIKKYVRYIADWRLGQLGLKPIYMIEDHPLPWLAPLLNGVEHANFFETRATEYSKA 307
Query: 120 AE-LKW 124
A +W
Sbjct: 308 ATKGQW 313
>gi|319942042|ref|ZP_08016361.1| ribonucleoside-diphosphate reductase subunit beta [Sutterella
wadsworthensis 3_1_45B]
gi|319804426|gb|EFW01304.1| ribonucleoside-diphosphate reductase subunit beta [Sutterella
wadsworthensis 3_1_45B]
Length = 344
Score = 113 bits (282), Expect = 9e-24, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61
DE+LH + + ENP LWT E + K + LE + + L
Sbjct: 213 DETLHTESMTKIFREYITENPELWTDELKAKIYGIAEVMVDLEDKFIDLAFGVSEMKRLT 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA- 120
Y+++IA+RR +GL+ +FK T NP PW+ ++ NFFE RV +Y +GA
Sbjct: 273 REDVRSYIRYIADRRLMGLGLKGIFKSTTNPLPWVDAML-GVTHTNFFENRVVDYAKGAL 331
Query: 121 ELKW 124
W
Sbjct: 332 TGSW 335
>gi|307719930|ref|YP_003891070.1| Ribonucleoside-diphosphate reductase [Sulfurimonas autotrophica DSM
16294]
gi|306978023|gb|ADN08058.1| Ribonucleoside-diphosphate reductase [Sulfurimonas autotrophica DSM
16294]
Length = 340
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E P L+T E + M EA LE + +GL
Sbjct: 215 RDEVTHLVLFQNLINTLRKERPDLFTDELRADVIEMFKEAVKLETEWGKYITQGQILGLT 274
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
EQY+Q++A+ R + +G + L+ + NP W+ + ++ NFFE VT Y +G+
Sbjct: 275 DEIVEQYIQYLADDRLNSVGFDKLYNVS-NPIKWVDDFAKFNDQKTNFFEGTVTNYSKGS 333
Query: 121 ELKWD 125
L +D
Sbjct: 334 -LSFD 337
>gi|289742419|gb|ADD19957.1| ribonucleotide reductase beta subunit [Glossina morsitans
morsitans]
Length = 396
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 9/124 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH F + + + K +++ ++ +A +E + E +P +G+N
Sbjct: 271 RDEGLHCEFAVLMFKHLIQ-------KPSKERILEIITDAVKIEKEFLTEALPVDLIGMN 323
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ S +Y++++A+R ++ + + ENPF +M++ I + + NFFE RV EYQ+
Sbjct: 324 SESMCKYIEYVADRLLLELDVGK-YYLAENPFEFMNK-ISIDGKTNFFEKRVGEYQKIGV 381
Query: 122 LKWD 125
D
Sbjct: 382 SSDD 385
>gi|328884923|emb|CCA58162.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
[Streptomyces venezuelae ATCC 10712]
Length = 338
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H+NF +V++ ++ E P L+ +Q+ ML EA E+ + + G G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPELFDDALRQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 271
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S +Y+Q +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E
Sbjct: 272 TESMREYLQCVADQRLQRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329
Query: 122 LKWD 125
D
Sbjct: 330 GSVD 333
>gi|254492407|ref|ZP_05105579.1| ribonucleoside-diphosphate reductase, beta subunit [Methylophaga
thiooxidans DMS010]
gi|224462299|gb|EEF78576.1| ribonucleoside-diphosphate reductase, beta subunit [Methylophaga
thiooxydans DMS010]
Length = 383
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/125 (40%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
MRDE +H +FGI V QI E +K + M EA E YA + +G
Sbjct: 262 MRDEVMHASFGIRVCKQIMKEEN---ITLDPKKVQQMFEEADAAEETYAGYILRDPILGY 318
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+ ++ ANRR Q+G E F E PW+ E +++KEKNFFET+VTEYQ G
Sbjct: 319 SKEVHHGQFRYTANRRAKQLGFEEPFPGAEATLPWLDEQANMRKEKNFFETKVTEYQTGG 378
Query: 121 ELKWD 125
LKWD
Sbjct: 379 GLKWD 383
>gi|254418345|ref|ZP_05032069.1| ribonucleoside-diphosphate reductase, beta subunit [Brevundimonas
sp. BAL3]
gi|196184522|gb|EDX79498.1| ribonucleoside-diphosphate reductase, beta subunit [Brevundimonas
sp. BAL3]
Length = 349
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDESLH I + + E TK +E + G
Sbjct: 201 VRDESLHCEGIIKLYHAFNKETG-AVTKAVADDIVDCCKTVVNMEDRFIDLAFEMGSVQG 259
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ +QY++FIA+ R Q+ L ++ ENP PW+ ++ + NFFE R TEY +
Sbjct: 260 MTPEDIKQYIRFIADWRLRQLKLPEVYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 319
Query: 120 A-ELKW 124
A + W
Sbjct: 320 ATQGNW 325
>gi|29829569|ref|NP_824203.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
avermitilis MA-4680]
gi|29606677|dbj|BAC70738.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptomyces avermitilis MA-4680]
Length = 338
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H++F +V++ ++ E P L+ E QQ+ ML EA E+ + + G G+N
Sbjct: 212 RDETMHMSFAFEVVDTVRKEEPELFDDELQQQVTDMLREAVEAELQFGRDLCGDGLPGMN 271
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S QY++ +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E
Sbjct: 272 TESMRQYLECVADQRLQRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRASAYQVAVE 329
Query: 122 LKWD 125
D
Sbjct: 330 GTVD 333
>gi|254384639|ref|ZP_04999978.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
Mg1]
gi|194343523|gb|EDX24489.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
Mg1]
Length = 338
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H+NF +V++ ++ E P L+ QQ+ ML EA E+ + + G G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVDAELQFGRDLCGDGLPGMN 271
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S +Y++ +A++R ++G P++ ++NPF +M E+ +++ NFFE R + YQ E
Sbjct: 272 TESMREYLECVADQRLVRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329
Query: 122 LKWD 125
D
Sbjct: 330 GTVD 333
>gi|302381236|ref|YP_003817059.1| ribonucleoside-diphosphate reductase [Brevundimonas subvibrioides
ATCC 15264]
gi|302191864|gb|ADK99435.1| Ribonucleoside-diphosphate reductase [Brevundimonas subvibrioides
ATCC 15264]
Length = 348
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDESLH + I + + E + TK LE + G
Sbjct: 200 VRDESLHCDGIIKLYHAFNKETG-VVTKAVADDIVQCCETVVGLEDKFIDLAFEAGEING 258
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ +QY++FIA+ R Q+ L L+ ENP PW+ ++ + NFFE R TEY +
Sbjct: 259 MTPEDIKQYIRFIADWRLRQLKLPELYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 318
Query: 120 AE 121
A
Sbjct: 319 AT 320
>gi|297745764|emb|CBI15820.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
R E LH +F + + ++ + P QK ++HEA +E + E +P +G+
Sbjct: 141 RYEGLHCDFACLLYSLLQKQLP-------WQKVHHIVHEAMEIETQFICEALPCALIGMK 193
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A Y++F+ +R +G E + ENPF WM E I L+ NFF+ R+ +YQ+ +
Sbjct: 194 ATLMSHYIKFVVDRLLVALGYERKYNV-ENPFDWM-EFIFLQGNANFFQRRMGDYQKASI 251
Query: 122 LK 123
+
Sbjct: 252 MS 253
>gi|315497476|ref|YP_004086280.1| ribonucleoside-diphosphate reductase [Asticcacaulis excentricus CB
48]
gi|315415488|gb|ADU12129.1| Ribonucleoside-diphosphate reductase [Asticcacaulis excentricus CB
48]
Length = 350
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDESLH I + + E TK LE + + G
Sbjct: 200 VRDESLHCEGIIKLYHAFNKETG-AVTKAVADDIVDCCKTVVSLEDKFIDLSFEMGPVEG 258
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ +QY+++IA+ R Q+ L +F ENP PW+ ++ + NFFE R TEY +
Sbjct: 259 MTPDDIKQYIRYIADWRLRQLELPEVFGVQENPLPWLQVLLSGVEHANFFEARATEYSKA 318
Query: 120 AE-LKW 124
A W
Sbjct: 319 ATKGSW 324
>gi|197103810|ref|YP_002129187.1| ribonucleoside-diphosphate reductase, beta subunit
[Phenylobacterium zucineum HLK1]
gi|196477230|gb|ACG76758.1| ribonucleoside-diphosphate reductase, beta subunit
[Phenylobacterium zucineum HLK1]
Length = 350
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDESLH I + + E T+ LE + G
Sbjct: 201 VRDESLHCEGIIKLYHAFNKETG-AVTQAVADDIVDCCKTVVGLEDKFIDLAFEAGEVQG 259
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ +QY++FIA+ R Q+ L ++ ENP PW+ ++ + NFFE R TEY +
Sbjct: 260 MTPDDIKQYIRFIADWRLKQLHLPQVYGIKENPLPWLQSMLSGVEHANFFEARATEYSKA 319
Query: 120 AE-LKW 124
A +W
Sbjct: 320 ATKGQW 325
>gi|260909050|gb|ACX54162.1| RR2 protein [Shrimp white spot syndrome virus]
gi|260909052|gb|ACX54163.1| RR2 protein [Shrimp white spot syndrome virus]
gi|260909054|gb|ACX54164.1| RR2 protein [Shrimp white spot syndrome virus]
gi|260909056|gb|ACX54165.1| RR2 protein [Shrimp white spot syndrome virus]
Length = 349
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 8/121 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F ++ + ++ P +++ ++ EA +E + ++P VG+N
Sbjct: 235 RDEGLHRDFACMLLKKGFVDTP------SRERILEIVTEAVRIEQEFLTVSLPVKLVGMN 288
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A++ ++GLE + T NPFP+M I L+ + NFFE RV EYQ+
Sbjct: 289 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN-ISLENKTNFFEKRVAEYQRAQV 346
Query: 122 L 122
+
Sbjct: 347 M 347
>gi|9633826|ref|NP_051904.1| gp015L [Rabbit fibroma virus]
gi|6578545|gb|AAF17899.1|AF170722_17 gp015L [Rabbit fibroma virus]
Length = 322
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL + ++ ++ EA ++E + + +P +G+N
Sbjct: 198 RDEGLHCDFACLMFK-------HLNHTPSETRATDIIKEAVVIEQQFLTKALPVRLIGIN 250
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G +F NPF +M E I L+ + NFFE RV++YQ+
Sbjct: 251 CDLMCQYIEFVADRLVTELGYSKIF-SATNPFDFM-ENISLEGKTNFFEKRVSDYQRMGV 308
Query: 122 LK 123
Sbjct: 309 AS 310
>gi|194755279|ref|XP_001959919.1| GF11796 [Drosophila ananassae]
gi|190621217|gb|EDV36741.1| GF11796 [Drosophila ananassae]
Length = 393
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 66/120 (55%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL K +++ ++ +A +E + + +P +G+N
Sbjct: 268 RDEGLHCDFAVLMFQ-------HLVQKPRRERIIEIIRDAVDIEQEFLTDALPVNLIGMN 320
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++F+A+R ++G+ ++ T+NPF +M E+I L + NFFE +V EYQ+
Sbjct: 321 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFFEKKVGEYQRMGV 378
>gi|149185037|ref|ZP_01863354.1| ribonucleotide reductase beta subunit [Erythrobacter sp. SD-21]
gi|148831148|gb|EDL49582.1| ribonucleotide reductase beta subunit [Erythrobacter sp. SD-21]
Length = 352
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDESLH I + ++ E L TK ++ + + LE + G
Sbjct: 189 IRDESLHCEGIIRMFHEFVRERDCL-TKAVKEDIIDICQKTVRLEDNFIDLAFEMGPVSG 247
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ ++Y+++IA+ R Q+ L+P++ ++P PW++ +I+ + NFFE R TEY +G
Sbjct: 248 MTPKDIKKYIRYIADWRLGQLNLDPIYMVDDHPLPWLAPLINGVEHANFFEQRATEYSKG 307
Query: 120 AE-LKW 124
A W
Sbjct: 308 ATKGDW 313
>gi|255724924|ref|XP_002547391.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
tropicalis MYA-3404]
gi|240135282|gb|EER34836.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
tropicalis MYA-3404]
Length = 387
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H ++ + + +L K ++ EA +E Y + +P +G+N
Sbjct: 259 RDEGIHTDYACLLFS-------YLENKPDPSIIEKIITEAVSIEKKYFSDALPVSLLGMN 311
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY+++ A+R G + + T NPF +M E I L + NFFE RV++YQ+
Sbjct: 312 CDLMCQYVEYCADRLLVAFGNDKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQRAGV 369
Query: 122 LK 123
++
Sbjct: 370 ME 371
>gi|297209|emb|CAA48969.1| C8L [Variola virus]
gi|745144|prf||2015436AF C8L gene
Length = 333
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R+++ +A +E + +P +G+N
Sbjct: 209 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 261
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ YM+F+A+R ++G + ++ T NP +M E I L+ + NFFE RV EYQ+
Sbjct: 262 CEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFFEKRVGEYQKMGV 319
Query: 122 LK 123
+
Sbjct: 320 MS 321
>gi|292658982|gb|ADE34370.1| ribonucleotide reductase small chain [Turbot reddish body
iridovirus]
Length = 312
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + Q + K Q+ + ++ +A +E A+ E + +G+N
Sbjct: 188 RDEGLHCDFACMLFRQ-------MANKPSQEDAHQIISDAVDIETAFFREALKTPLLGMN 240
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ S Y+QF+A+R +G ++ NPF +M I ++ + NFFE RV+EYQ+
Sbjct: 241 SDSMRLYIQFVADRLLDALGYAKMYNVA-NPFDFMDN-ISIEGKTNFFERRVSEYQRMGV 298
>gi|266623614|ref|ZP_06116549.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
hathewayi DSM 13479]
gi|288864591|gb|EFC96889.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
hathewayi DSM 13479]
Length = 346
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I ++K E P L+T + R M+ E EIA+ H + GL
Sbjct: 219 RDENTHLWLFRNMILELKNEEPELFTPDRVDVYREMIKEGCRQEIAWGHYAIGDKVPGLT 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+Q++ N RC +G EP+++ E W+S+ + + +FFE R T Y
Sbjct: 279 KDMITDYIQYLGNLRCMSLGFEPIYEGHEKEPESMAWVSQYSNANMIKTDFFEARSTAYA 338
Query: 118 QGAELKWD 125
+ + L D
Sbjct: 339 KSSALVDD 346
>gi|13242599|ref|NP_077613.1| EsV-1-128 [Ectocarpus siliculosus virus 1]
gi|13177402|gb|AAK14546.1|AF204951_128 EsV-1-128 [Ectocarpus siliculosus virus 1]
Length = 419
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH + + +K P +++ + A +E + +P +G++
Sbjct: 294 RDEGLHATASVLIYKHLKNRLP-------RERVHEIFKHAVSVECEFISSALPVALIGIS 346
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S +Y++F+A+ +Q+G + ++ NPF WM +I L+ + NFFE RV EY +
Sbjct: 347 EKSMTEYIKFVADYWLNQLGYDKVYNCA-NPFEWMD-MISLQGKTNFFENRVAEYSKPGV 404
Query: 122 L 122
L
Sbjct: 405 L 405
>gi|544843|gb|AAB29634.1| C8L product [variola virus VAR, India-1967, Peptide, 333 aa]
Length = 333
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R+++ +A +E + +P +G+N
Sbjct: 209 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 261
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ YM+F+A+R ++G + ++ T NP +M E I L+ + NFFE RV EYQ+
Sbjct: 262 CEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFFEKRVGEYQKMGV 319
Query: 122 LK 123
+
Sbjct: 320 MS 321
>gi|40556174|ref|NP_955259.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
gi|40233999|gb|AAR83582.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
Length = 323
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + L K Q + ++ A +E + E + +G+N
Sbjct: 197 RDEGLHCDFACLLFTNY------LSHKPSQDRVYEIIDSAVSVETEFLTEALSIDLIGMN 250
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ S +Y++F+++R +G + ENPF +M E I L+ + NFFE RV+ YQ+
Sbjct: 251 SKSMIEYIKFVSDRLLVSLGFSKKYNV-ENPFSFM-ENISLEGKANFFEKRVSNYQKMGV 308
Query: 122 LK 123
+
Sbjct: 309 MS 310
>gi|83859670|ref|ZP_00953190.1| ribonucleotide-diphosphate reductase beta subunit [Oceanicaulis
alexandrii HTCC2633]
gi|83852029|gb|EAP89883.1| ribonucleotide-diphosphate reductase beta subunit [Oceanicaulis
alexandrii HTCC2633]
Length = 348
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDESLH + + + E L TK + LE + G
Sbjct: 197 VRDESLHCEGMMKLFHTFAEETGAL-TKGVKDDIADCCKTVVSLEDKFIELAFEAGEVEG 255
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ + Y+++IA+ R Q+ L ++ E+P PW++E+++ + NFFE R TEY +G
Sbjct: 256 MTPEDIKNYIRYIADWRMKQLKLPTIYGVEEHPIPWLTEILNGVEHANFFEARATEYSKG 315
Query: 120 A-ELKW 124
A + W
Sbjct: 316 ATQGDW 321
>gi|156839886|ref|XP_001643629.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
70294]
gi|156114248|gb|EDO15771.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
70294]
Length = 394
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL K ++ EA +E Y + +P +G+N
Sbjct: 264 RDEGLHTDFASLLFS-------HLDNKPDPAIVEKIVTEAVEIEKRYFIDALPVALLGMN 316
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++F+A+R G E +K ENPF +M E I L + NFFE RV++YQ+ +
Sbjct: 317 AKLMNQYVEFVADRLLVSFGNEKYYKV-ENPFDFM-ENISLAGKTNFFEKRVSDYQKASV 374
Query: 122 L 122
+
Sbjct: 375 I 375
>gi|306478720|ref|NP_042072.2| Ribonucleoside-diphosphate reductase small chain [Variola virus]
gi|464615|sp|P33799|RIR2_VAR67 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
Length = 319
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ R+++ +A +E + +P +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFLTVALPVKLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ YM+F+A+R ++G + ++ T NP +M E I L+ + NFFE RV EYQ+
Sbjct: 248 CEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFFEKRVGEYQKMGV 305
Query: 122 LK 123
+
Sbjct: 306 MS 307
>gi|291276761|ref|YP_003516533.1| ribonucleoside-diphosphate reductase subunit beta [Helicobacter
mustelae 12198]
gi|290963955|emb|CBG39794.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
mustelae 12198]
Length = 344
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++I +K E P L+ K+ +++ M A +E A+ +GL
Sbjct: 221 RDEVTHLILFQNMIRTLKKERPDLFDKDLEEEIVEMFRRAVEIEAAWGEYITQGQILGLT 280
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
QY+Q++A++R ++G+ L+ E+P W+ + ++ NFFE +VT Y +G+
Sbjct: 281 GEVIHQYIQYLADQRLSKVGMPKLYNV-EHPIKWVEQYASFNEQRTNFFEAKVTNYAKGS 339
Query: 121 ELKW 124
+
Sbjct: 340 LIDD 343
>gi|15617531|ref|NP_258331.1| RR2B [Spodoptera litura NPV]
gi|15553267|gb|AAL01745.1|AF325155_57 ribonucleotide reductase small subunit homolog [Spodoptera litura
NPV]
Length = 333
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + H+ K + + ++ EA +E + E +P +G+N
Sbjct: 206 RDEGLHTDFACLMYS-------HIVNKPTRDRILDIITEAVAIENEFVTEALPVAMLGMN 258
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+Y++F+A+R ++ E + T+NPF +M+ +I L+ + NFFE +V+EYQ+
Sbjct: 259 NDLMSKYIEFVADRLLLELIGERHYN-TKNPFDFMN-LISLEGKTNFFEKKVSEYQKYGV 316
Query: 122 LK 123
+
Sbjct: 317 MS 318
>gi|294463759|gb|ADE77404.1| unknown [Picea sitchensis]
Length = 289
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + L +K +++ + ++ +A +E + E + VG+N
Sbjct: 160 RDEGLHCDFAC-------LLYSLLKSKLSEERVKAIVRDAVDIEREFVCEALSCDLVGMN 212
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY++FIA+R +G ++ + ENPF WM +I L+ + NFFE RV +YQ+ +
Sbjct: 213 ATLMSQYIKFIADRLLVALGHGKMY-HVENPFDWMD-LISLQGKTNFFERRVGDYQKASI 270
Query: 122 LK 123
+
Sbjct: 271 MS 272
>gi|117928932|ref|YP_873483.1| ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
11B]
gi|117649395|gb|ABK53497.1| Ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
11B]
Length = 348
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/122 (38%), Positives = 76/122 (62%), Gaps = 2/122 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES+H+ F DVI+ ++ E P L+ E +++R ML EA E +A + + +G G++
Sbjct: 222 RDESMHMAFAFDVIDTVRREEPELFDDELARQAREMLAEAVDCETQFAEDLLGQGVPGMS 281
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
Y++ +A+RRC Q+GLEP++ + NPF +M E+ D+++ NFFE RV YQ G
Sbjct: 282 LADMRSYLEHVADRRCVQLGLEPIYG-SPNPFTFM-ELQDVQELSNFFERRVAAYQIGVS 339
Query: 122 LK 123
+
Sbjct: 340 GE 341
>gi|27923845|sp|Q9QTF2|RIR2_RSIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|5688956|dbj|BAA82755.1| ribonucleotide reductase small subunit [Red sea bream iridovirus]
gi|327396894|dbj|BAK14260.1| ribonucleotide diphosphate reductase small subunit [Red sea bream
iridovirus]
Length = 312
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + Q + K Q + ++ +A +E A+ E + +G+N
Sbjct: 188 RDEGLHCDFACMLFRQ-------MANKPCQDDAHQIISDAVDIETAFFREALKTPLLGMN 240
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ S + Y+QF+A+R +G ++ + NPF +M I ++ + NFFE RV+EYQ+
Sbjct: 241 SDSMKLYIQFVADRLLDALGYAKMYNVS-NPFDFMDN-ISIEGKTNFFERRVSEYQRMGV 298
>gi|238061574|ref|ZP_04606283.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
39149]
gi|237883385|gb|EEP72213.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
39149]
Length = 344
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 4/126 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES+H+ F DV++ ++ E P L+ E ++ R ML EA E +A + + +G GL+
Sbjct: 218 RDESMHMAFAFDVVDTVRHEEPDLFDDELARQVREMLAEAVECEAQFAEDLLEQGVSGLS 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
QY+Q +A+RR Q+G+ PL+ NPF +M E+ D+++ NFFE RV+ YQ G
Sbjct: 278 LDDMRQYLQHVADRRLAQLGIAPLYGSA-NPFAFM-ELQDVQELSNFFERRVSAYQVGVT 335
Query: 120 AELKWD 125
+ +D
Sbjct: 336 GSVTFD 341
>gi|19881429|ref|NP_612246.1| putative ribonucleotide reductase small subunit [Infectious spleen
and kidney necrosis virus]
gi|19773634|gb|AAL98748.1|AF371960_24 putative ribonucleotide reductase small subunit [infectious spleen
and kidney necrosis virus]
Length = 312
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + Q + K Q + ++ +A +E A+ E + +G+N
Sbjct: 188 RDEGLHCDFACMLFRQ-------MANKPCQDDAHQIISDAVDIETAFFQEALKTPLLGMN 240
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ S Y+QF+A+R +G ++ NPF +M I ++ + NFFE RV+EYQ+
Sbjct: 241 SDSMRLYIQFVADRLLDALGYAKMYNVA-NPFDFMDN-ISIEGKTNFFERRVSEYQRMGV 298
>gi|110802082|ref|YP_699620.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
perfringens SM101]
gi|110682583|gb|ABG85953.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
perfringens SM101]
Length = 344
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I ++K E P ++TKE +++ R M+ EIA+ H + G+N
Sbjct: 218 RDENTHLWLFRSIIKELKEEIPEVFTKELKEELREMMRTGVEHEIAWGHYVIGDNVTGIN 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
E+Y+++I N R IGLEPLF+ Y ENP PW+ D + + +FFE + T Y +
Sbjct: 278 KNLIERYIKYIGNLRAKAIGLEPLFEGYNENPAPWVDYYADANQVKTDFFEAKSTAYAKA 337
Query: 120 AELKWD 125
L D
Sbjct: 338 GALIDD 343
>gi|330998673|ref|ZP_08322403.1| ribonucleoside-diphosphate reductase, beta subunit [Parasutterella
excrementihominis YIT 11859]
gi|329576534|gb|EGG58042.1| ribonucleoside-diphosphate reductase, beta subunit [Parasutterella
excrementihominis YIT 11859]
Length = 327
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV---G 59
DE+LH I + + IENP LWT +++ + + LE A+ +
Sbjct: 193 DETLHTESMIRLFREYIIENPELWTDSLKKRIYDIAEKMIELEDAFIDLAFGVNDMSKQN 252
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L+ + Y+++I +RR +G++ +FK NP PW+ ++ NFFE RV +Y +G
Sbjct: 253 LSPADVKAYIRWICDRRLAAMGMKEIFKVNVNPLPWVDSML-GVTHTNFFENRVVDYAKG 311
Query: 120 A-ELKW 124
A W
Sbjct: 312 ALSGSW 317
>gi|282861024|ref|ZP_06270089.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. ACTE]
gi|282563682|gb|EFB69219.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. ACTE]
Length = 340
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H+NF +V++ ++ E P L+ QQ+ ML EA E+ + + +G G+N
Sbjct: 214 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLREAVEAELQFGRDLCGEGLPGMN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S QY++ +A++R ++G L+ +ENPF +M E+ +++ NFFE R + YQ E
Sbjct: 274 TESMRQYLECVADQRLTRLGFPALYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331
Query: 122 LK 123
Sbjct: 332 GS 333
>gi|167648664|ref|YP_001686327.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter sp.
K31]
gi|167351094|gb|ABZ73829.1| Ribonucleoside-diphosphate reductase [Caulobacter sp. K31]
Length = 346
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDESLH I + + E T E ++E A+ G
Sbjct: 197 IRDESLHCEGIIKLYHAFNAET-KCVTPEVAADIVECCKSVVIMEDAFIDLAFEAGEIQG 255
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ +QY++FIA+ R Q+ L ++ ENP PW+ ++ + NFFE R TEY +
Sbjct: 256 MTPHDIKQYIRFIADWRLRQLHLPEVYGIKENPLPWLQSLLSGVEHANFFEARATEYSKA 315
Query: 120 A-ELKW 124
A +W
Sbjct: 316 ATTGQW 321
>gi|303258316|ref|ZP_07344319.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderiales
bacterium 1_1_47]
gi|302858762|gb|EFL81850.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderiales
bacterium 1_1_47]
Length = 328
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV---G 59
DE+LH I + + IENP LWT +++ + + LE A+ +
Sbjct: 194 DETLHTESMIRLFREYIIENPELWTDSLKKRIYDIAEKMIELEDAFIDLAFGVNDMSKQN 253
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L+ + Y+++I +RR +G++ +FK NP PW+ ++ NFFE RV +Y +G
Sbjct: 254 LSPADVKAYIRWICDRRLAAMGMKEIFKVNVNPLPWVDSML-GVTHTNFFENRVVDYAKG 312
Query: 120 A-ELKW 124
A W
Sbjct: 313 ALSGSW 318
>gi|320008647|gb|ADW03497.1| Ribonucleoside-diphosphate reductase [Streptomyces flavogriseus
ATCC 33331]
Length = 338
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H+NF +V++ ++ E P L+ E +Q+ ML EA E+ + + G G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPDLFDDELRQQVTDMLKEAVEAELQFGRDLCGDGLPGMN 271
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S QY++ +A++R ++G L+ +ENPF +M E+ +++ NFFE R + YQ E
Sbjct: 272 TESMRQYLECVADQRLTRLGFPALYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329
Query: 122 LK 123
Sbjct: 330 GS 331
>gi|18311342|ref|NP_563276.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
perfringens str. 13]
gi|110801267|ref|YP_697050.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
perfringens ATCC 13124]
gi|168205189|ref|ZP_02631194.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
perfringens E str. JGS1987]
gi|168210336|ref|ZP_02635961.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
perfringens B str. ATCC 3626]
gi|168213271|ref|ZP_02638896.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
perfringens CPE str. F4969]
gi|168216675|ref|ZP_02642300.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
perfringens NCTC 8239]
gi|169347055|ref|ZP_02865997.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
perfringens C str. JGS1495]
gi|182625797|ref|ZP_02953564.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
perfringens D str. JGS1721]
gi|18146026|dbj|BAB82066.1| ribonucleoside-diphosphate reductase beta subunit [Clostridium
perfringens str. 13]
gi|110675914|gb|ABG84901.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
perfringens ATCC 13124]
gi|169296738|gb|EDS78867.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
perfringens C str. JGS1495]
gi|170663363|gb|EDT16046.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
perfringens E str. JGS1987]
gi|170711548|gb|EDT23730.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
perfringens B str. ATCC 3626]
gi|170715235|gb|EDT27417.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
perfringens CPE str. F4969]
gi|177908953|gb|EDT71440.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
perfringens D str. JGS1721]
gi|182381151|gb|EDT78630.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
perfringens NCTC 8239]
Length = 344
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I ++K E P ++TKE +++ R M+ EIA+ H + G+N
Sbjct: 218 RDENTHLWLFRSIIKELKEEIPEVFTKELKEELREMVRTGVEHEIAWGHYVIGDNVTGIN 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
E+Y+++I N R IGLEPLF+ Y ENP PW+ D + + +FFE + T Y +
Sbjct: 278 KNLIERYIKYIGNLRVKAIGLEPLFEGYNENPAPWVDYYADANQVKTDFFEAKSTAYAKA 337
Query: 120 AELKWD 125
L D
Sbjct: 338 GALIDD 343
>gi|262263187|dbj|BAI48096.1| ribonucleotide reductase M2 [Sus scrofa]
Length = 355
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 9/114 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N
Sbjct: 247 RDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMN 299
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
+QY++F+A+R ++G +F ENPF +M E I L+ + NFFE RV E
Sbjct: 300 CTLMKQYIEFVADRLMLELGFGKVF-RVENPFDFM-ENISLEGKTNFFEKRVGE 351
>gi|253827828|ref|ZP_04870713.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
canadensis MIT 98-5491]
gi|313142391|ref|ZP_07804584.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
canadensis MIT 98-5491]
gi|253511234|gb|EES89893.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
canadensis MIT 98-5491]
gi|313131422|gb|EFR49039.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
canadensis MIT 98-5491]
Length = 341
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN +K E+P L+TK+ +++ M EA +E A+ +GL
Sbjct: 217 RDEVTHLILFQNMINSVKKESPELFTKDLEEEVIEMFREAVKVETAWGEYITQGQILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
+ ++Y++++A+ R +IGL L+ ++P W+ + + NFFE VT Y +G+
Sbjct: 277 SEIIQEYIKYLADERLRRIGLPTLYN-AKHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 INFDD 340
>gi|50237508|gb|AAT71841.1| ribonucleotide reductase small chain [Rock bream iridovirus]
Length = 312
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + Q + K Q + ++ +A +E A+ E + +G+N
Sbjct: 188 RDEGLHCDFACMLFRQ-------MANKPCQDDAHEIISDAVDIETAFFREALKTPLLGMN 240
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ S + Y+QF+A+R +G ++ NPF +M I ++ + NFFE RV+EYQ+
Sbjct: 241 SDSMKLYIQFVADRLLDALGYAKMYNVG-NPFDFMDN-ISIEGKTNFFERRVSEYQRMGV 298
>gi|304321610|ref|YP_003855253.1| ribonucleoside-diphosphate reductase subunit beta [Parvularcula
bermudensis HTCC2503]
gi|303300512|gb|ADM10111.1| ribonucleoside-diphosphate reductase, beta subunit [Parvularcula
bermudensis HTCC2503]
Length = 340
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDESLH + + ++ E L T LE + G
Sbjct: 197 IRDESLHCEGMVRLFHEFARETGAL-TPAVADDIVDCCKTVVDLEDKFIELAFEAGEVEG 255
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ + Y++ IA+ R Q+GL P+F +P PW+ E+++ + NFFE R TEY +G
Sbjct: 256 MTPDDIKAYIRHIADWRLSQLGLPPVFAADNHPLPWLREILNGVEHANFFEARATEYSKG 315
Query: 120 AE-LKW 124
A +W
Sbjct: 316 ATRGEW 321
>gi|153875510|ref|ZP_02003277.1| ribonucleotide-diphosphate reductase beta subunit [Beggiatoa sp.
PS]
gi|152068026|gb|EDN66723.1| ribonucleotide-diphosphate reductase beta subunit [Beggiatoa sp.
PS]
Length = 374
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 57/125 (45%), Positives = 80/125 (64%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
RDE+LH + G+ +I QI EN LW Q++SR ++ EA LE YAH +MP G VGL
Sbjct: 251 RDENLHSSNGLWLIKQIIQENHELWDSTMQERSRAIVSEAVKLETDYAHASMPEGGIVGL 310
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+ ++ F+A+ C +G++PLF+ E+P PW+SE +L E NFFE RV EYQ G+
Sbjct: 311 PVKTYIKFSHFVADNICKNLGIKPLFRVREHPMPWISEY-ELNHEVNFFEGRVREYQTGS 369
Query: 121 ELKWD 125
+L WD
Sbjct: 370 QLTWD 374
>gi|224418874|ref|ZP_03656880.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
canadensis MIT 98-5491]
Length = 340
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN +K E+P L+TK+ +++ M EA +E A+ +GL
Sbjct: 216 RDEVTHLILFQNMINSVKKESPELFTKDLEEEVIEMFREAVKVETAWGEYITQGQILGLT 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
+ ++Y++++A+ R +IGL L+ ++P W+ + + NFFE VT Y +G+
Sbjct: 276 SEIIQEYIKYLADERLRRIGLPTLYN-AKHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 334
Query: 121 ELKWD 125
D
Sbjct: 335 INFDD 339
>gi|62421216|gb|AAX82336.1| ribonucleotide reductase small chain [Orange-spotted grouper
iridovirus]
Length = 312
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + Q + K Q + ++ +A +E A+ E + +G+N
Sbjct: 188 RDEGLHCDFACMLFRQ-------MANKPCQDDAHEIISDAVDIETAFFREALKTPLLGMN 240
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ S + Y+QF+A+R +G ++ NPF +M I ++ + NFFE RV+EYQ+
Sbjct: 241 SDSMKLYIQFVADRLLDALGYAKMYNVG-NPFDFMDN-ISIEGKTNFFERRVSEYQRMGV 298
>gi|331086748|ref|ZP_08335825.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
bacterium 9_1_43BFAA]
gi|330409914|gb|EGG89349.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
bacterium 9_1_43BFAA]
Length = 347
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +++ +++ E P L+++E +++ R M+ E EIA+ H + GL+
Sbjct: 219 RDENTHLWLFTNILRELRKELPELFSEEKEKEYRQMIREGCEQEIAWGHYVIGDAVSGLS 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N RC +GL P+++ E W+S+ + + +FFE + T Y
Sbjct: 279 CDMITDYVKYLGNLRCKNLGLAPIYEGHEKEPESMGWVSQFSNANMIKTDFFEAKSTAYA 338
Query: 118 QGAELKWD 125
+ + L D
Sbjct: 339 KSSALVDD 346
>gi|269865524|ref|XP_002651954.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063427|gb|EED42101.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 205
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + I + ++ EA +E + E++P +G+N
Sbjct: 83 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 133
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G
Sbjct: 134 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 189
>gi|325663145|ref|ZP_08151595.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
bacterium 4_1_37FAA]
gi|325470599|gb|EGC73829.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
bacterium 4_1_37FAA]
Length = 347
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +++ +++ E P L+++E +++ R M+ E EIA+ H + GL+
Sbjct: 219 RDENTHLWLFTNILRELRKELPELFSEEKEKEYRQMIREGCEQEIAWGHYVIGDAVSGLS 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N RC +GL P+++ E W+S+ + + +FFE + T Y
Sbjct: 279 CDMITDYVKYLGNLRCKNLGLAPIYEGHEKEPESMGWVSQFSNANMIKTDFFEAKSTAYA 338
Query: 118 QGAELKWD 125
+ + L D
Sbjct: 339 KSSALVDD 346
>gi|297192180|ref|ZP_06909578.1| ribonucleoside-diphosphate reductase subunit beta protein
[Streptomyces pristinaespiralis ATCC 25486]
gi|197720175|gb|EDY64083.1| ribonucleoside-diphosphate reductase subunit beta protein
[Streptomyces pristinaespiralis ATCC 25486]
Length = 340
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H+NF +V++ ++ E P L+ E +Q+ ML EA E+ + + +G G+N
Sbjct: 214 RDETMHMNFAFEVVDTVRKEEPELFDDELRQQVTDMLKEAVEAELQFGRDLCGEGLPGMN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S +Y+Q +A++R ++G P++ ++NPF +M E+ +++ NFFE R + YQ E
Sbjct: 274 TESMREYLQCVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 331
Query: 122 LK 123
Sbjct: 332 GS 333
>gi|330467634|ref|YP_004405377.1| ribonucleoside-diphosphate reductase [Verrucosispora maris
AB-18-032]
gi|328810605|gb|AEB44777.1| Ribonucleoside-diphosphate reductase [Verrucosispora maris
AB-18-032]
Length = 342
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 77/126 (61%), Gaps = 4/126 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES+H+ F DV++ ++ E P L+ E +Q+ R ML EA E+ +A + + +G G+
Sbjct: 216 RDESMHMAFAFDVVDTVRAEEPDLFDAEMEQQVRDMLAEAVDCEVQFAADLLEQGVSGMP 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
QY+Q +A+RR +G+ P++ + NPF +M E+ D+++ NFFE RV+ YQ G
Sbjct: 276 LADMRQYLQHVADRRLAMLGIAPMYG-STNPFAFM-ELQDVQELSNFFERRVSAYQVGVT 333
Query: 120 AELKWD 125
+ +D
Sbjct: 334 GTVAFD 339
>gi|50955339|ref|YP_062627.1| ribonucleotide-diphosphate reductase subunit beta [Leifsonia xyli
subsp. xyli str. CTCB07]
gi|50951821|gb|AAT89522.1| ribonucleoside-diphosphate reductase, beta chain [Leifsonia xyli
subsp. xyli str. CTCB07]
Length = 329
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 47/125 (37%), Positives = 73/125 (58%), Gaps = 4/125 (3%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLHL FGI++I + ENP L T EF + + M+ +A +E Y + +P G +GL
Sbjct: 205 VRDESLHLKFGINLILTVLEENPDLQTPEFAAEIKQMILDAVEMEEQYNRDLLPGGILGL 264
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY---Q 117
NA QY++++A+RR ++G E +K + NP WM+ D + NFFE+ T Y
Sbjct: 265 NANYINQYVKYLADRRLEELGFEAEYKVS-NPAKWMATANDTLELVNFFESTNTSYESNA 323
Query: 118 QGAEL 122
+ +
Sbjct: 324 KASSG 328
>gi|224438210|ref|ZP_03659145.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
cinaedi CCUG 18818]
gi|313144656|ref|ZP_07806849.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
cinaedi CCUG 18818]
gi|313129687|gb|EFR47304.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
cinaedi CCUG 18818]
Length = 348
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL +IN ++ E PHL+T +++ M +A +E + +GL
Sbjct: 224 RDEVTHLLVFQQMINALRKEQPHLFTPSLEEEVIAMFQKAVEIESVWGEYITQGQILGLT 283
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
A +Y+Q++A+ R +GL ++ +++NP W+ + ++ NFFE +VT Y +G+
Sbjct: 284 AEIIREYIQYLADMRLRAVGLREIY-HSKNPIKWVEQFASFNDQKTNFFEAKVTNYSKGS 342
Query: 121 ELKWD 125
D
Sbjct: 343 INFDD 347
>gi|182419335|ref|ZP_02950587.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
butyricum 5521]
gi|237666940|ref|ZP_04526925.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
butyricum E4 str. BoNT E BL5262]
gi|182376666|gb|EDT74238.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
butyricum 5521]
gi|237658139|gb|EEP55694.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
butyricum E4 str. BoNT E BL5262]
Length = 344
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I +++ EN L+T+E + + R M+ EI + H + G+N
Sbjct: 218 RDENTHLWLFRNIIKELQNENAELFTEEIKNELREMMKTGVEQEILWGHYVIGDKIQGIN 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
E+Y++++ N+R +I LEPLF+ + NP PW+ + + +FFE R T Y +
Sbjct: 278 KKLIEEYIKYLGNKRLKEINLEPLFEGHDVNPAPWVDRQSNANSVKTDFFEARSTAYAKA 337
Query: 120 AELKWD 125
A L D
Sbjct: 338 ATLVDD 343
>gi|314055235|ref|YP_004063573.1| ribonucleoside-diphosphate reductase small subunit-possible host
origin [Ostreococcus tauri virus 2]
gi|313575126|emb|CBI70139.1| ribonucleoside-diphosphate reductase small subunit-possible host
origin [Ostreococcus tauri virus 2]
Length = 408
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 65/124 (52%), Gaps = 12/124 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH F +++ ++ + + ++ EA +E + + +P +G+N
Sbjct: 287 RDEGLHQEFAVELFKTLR-------NRPTTETIHAIVKEAVEIEKGFILDALPCNLIGMN 339
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +Y++++++R Q+G+ P++ +NPF +M E I L + NFFE RV +Y +
Sbjct: 340 SEKMSEYIEYVSDRLLKQVGVPPIWN-AKNPFDFM-ENISLDGKTNFFEKRVGDY---GK 394
Query: 122 LKWD 125
L D
Sbjct: 395 LDDD 398
>gi|329847182|ref|ZP_08262210.1| ribonucleotide reductase, small chain family protein [Asticcacaulis
biprosthecum C19]
gi|328842245|gb|EGF91814.1| ribonucleotide reductase, small chain family protein [Asticcacaulis
biprosthecum C19]
Length = 352
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDESLH I + + E L TK Q +E + G
Sbjct: 200 VRDESLHCEGIIKLYHAFAKETKAL-TKSVQDDIIDCCKTVVTMEDKFIDLAFEMGPVQG 258
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ + Y+++IA+ R Q+ L ++ ENP PW+ ++ + NFFE R TEY +
Sbjct: 259 MTPDDIKAYIRYIADWRLRQLNLPEVYGGVKENPLPWLQVLLSGVEHANFFEARATEYSK 318
Query: 119 GA-ELKW 124
A +W
Sbjct: 319 AATTGQW 325
>gi|182436093|ref|YP_001823812.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces griseus subsp. griseus NBRC 13350]
gi|326776718|ref|ZP_08235983.1| Ribonucleoside-diphosphate reductase [Streptomyces cf. griseus
XylebKG-1]
gi|178464609|dbj|BAG19129.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces griseus subsp. griseus NBRC 13350]
gi|326657051|gb|EGE41897.1| Ribonucleoside-diphosphate reductase [Streptomyces cf. griseus
XylebKG-1]
Length = 338
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H+NF +V++ ++ E P L+ QQ+ ML EA E+ + + +G G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPDLFDDALQQQVTDMLKEAVEAELQFGRDLCGEGLPGMN 271
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S QY++ +A++R ++G ++ +ENPF +M E+ +++ NFFE R + YQ E
Sbjct: 272 TESMRQYLECVADQRLARLGFPTVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329
Query: 122 LK 123
Sbjct: 330 GS 331
>gi|237752265|ref|ZP_04582745.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
winghamensis ATCC BAA-430]
gi|229376507|gb|EEO26598.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
winghamensis ATCC BAA-430]
Length = 343
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E PHL+TK+ ++ M EA +E + +GL
Sbjct: 219 RDEVTHLLLFQNMINSLRKEMPHLFTKDLIEEVLEMFREAVRVESTWGEYITQGQILGLT 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
+ +Y++++A+ R ++GL L+ +P W+ + + NFFE VT Y +G+
Sbjct: 279 SEIIHEYIRYLADNRLTRVGLPALYN-ARHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 337
Query: 121 ELKWD 125
D
Sbjct: 338 INFDD 342
>gi|254796877|ref|YP_003081714.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
risticii str. Illinois]
gi|254590113|gb|ACT69475.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
risticii str. Illinois]
Length = 286
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH N + +EN + + + + R + E A+ G
Sbjct: 153 VRDETLHSNSITKLFRTFLLEN-DIDKLKLEAEIREICDAMVHHEDAFIDLAFEMGDVEG 211
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A ++Y+++IAN R Q+G +++ NP W+ V++ + NFFE + TEY +
Sbjct: 212 LKASEVKEYIRYIANLRLKQLGFSEIYEQKVNPLLWLEAVLNTVEHTNFFENKATEYSKA 271
Query: 120 AE-LKWD 125
A WD
Sbjct: 272 ATKGTWD 278
>gi|155370749|ref|YP_001426283.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
virus FR483]
gi|155124069|gb|ABT15936.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
virus FR483]
Length = 348
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH FG + +++ K + + ++ EA E + E +P +G+N
Sbjct: 224 RDEGLHQQFGELLYSKL-------ENKLSLAQVKAIVEEAVANEKEFICEAIPCRMIGMN 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + NPF +M E+I L+ + NFFE RV+EYQ+
Sbjct: 277 SELMGQYLEFVADRIFVALGHPKQYN-ATNPFDFM-ELISLEGKSNFFERRVSEYQRPGV 334
Query: 122 LK 123
+
Sbjct: 335 MN 336
>gi|295691241|ref|YP_003594934.1| Ribonucleoside-diphosphate reductase [Caulobacter segnis ATCC
21756]
gi|295433144|gb|ADG12316.1| Ribonucleoside-diphosphate reductase [Caulobacter segnis ATCC
21756]
Length = 346
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDESLH + I + + E TK LE + G
Sbjct: 198 IRDESLHCDGIIKLYHAFNKETG-AVTKAVADDIVDCCKHVVGLEDKFIDLAFEAGEIQG 256
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ + Y++FIA+ R Q+ L ++ ENP PW+ ++ + NFFE R TEY +
Sbjct: 257 MTPDDIKSYIRFIADWRLRQLQLPEVYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 316
Query: 120 AE-LKW 124
A W
Sbjct: 317 ATKGSW 322
>gi|78776214|ref|YP_392529.1| ribonucleotide-diphosphate reductase subunit beta [Sulfurimonas
denitrificans DSM 1251]
gi|78496754|gb|ABB43294.1| Ribonucleoside-diphosphate reductase [Sulfurimonas denitrificans
DSM 1251]
Length = 340
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E P L+ ++ +++ M EA LE+A+ +GL
Sbjct: 215 RDEVTHLVLFQNLINSLRKERPDLFNEKLKEEVIEMFKEAVALEVAWGKYITGGQILGLT 274
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
EQY+Q++A+ R +G L+ T NP W+ + ++ NFFE V Y +G+
Sbjct: 275 DAIIEQYIQYLADDRLTSVGFAKLYNVT-NPIKWVDDFSKFNDQKTNFFEGTVANYSKGS 333
Query: 121 ELKWD 125
D
Sbjct: 334 LTFDD 338
>gi|239944172|ref|ZP_04696109.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces roseosporus NRRL 15998]
gi|239990628|ref|ZP_04711292.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces roseosporus NRRL 11379]
gi|291447643|ref|ZP_06587033.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
roseosporus NRRL 15998]
gi|291350590|gb|EFE77494.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
roseosporus NRRL 15998]
Length = 338
Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H+NF +V++ ++ E P L+ E QQ+ ML EA E+ + + +G G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPDLFDDELQQQVTDMLKEAVEAELQFGRDLCGEGLPGMN 271
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S QY++ +A++R ++G ++ +ENPF +M E+ +++ NFFE R + YQ E
Sbjct: 272 TESMRQYLECVADQRLARLGFPTVYG-SENPFSFM-ELQGVQELTNFFERRPSAYQVAVE 329
Query: 122 LK 123
Sbjct: 330 GS 331
>gi|282849773|ref|ZP_06259157.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
parvula ATCC 17745]
gi|282580710|gb|EFB86109.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
parvula ATCC 17745]
Length = 342
Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++I +++ E P L+T E + K M+ + EIA+ +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
E+Y++++AN R IGL L+ ENP W+ +L + +FFE +VT Y +
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKENPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333
Query: 120 AELKWD 125
A +D
Sbjct: 334 AAFDFD 339
>gi|313683656|ref|YP_004061394.1| ribonucleotide reductase [Sulfuricurvum kujiense DSM 16994]
gi|313156516|gb|ADR35194.1| ribonucleotide reductase [Sulfuricurvum kujiense DSM 16994]
Length = 339
Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T+E ++ M +A LE A+ +GL
Sbjct: 215 RDEVTHLVLFQNIINTLRRERSDLFTEELIEEVYDMFRKAVELETAWGKYITQGQILGLT 274
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
EQY+Q++A++R +GL+PL+ + +P W+ + ++ NFFE VT Y +G+
Sbjct: 275 NEIVEQYIQYLADQRLTAVGLKPLYNVS-HPIKWVDDFSKFNDQKTNFFEGTVTNYSKGS 333
Query: 121 ELKWD 125
L +D
Sbjct: 334 -LSFD 337
>gi|317122809|ref|YP_004102812.1| ribonucleoside-diphosphate reductase [Thermaerobacter marianensis
DSM 12885]
gi|315592789|gb|ADU52085.1| Ribonucleoside-diphosphate reductase [Thermaerobacter marianensis
DSM 12885]
Length = 336
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 43/120 (35%), Positives = 71/120 (59%), Gaps = 1/120 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
++DESLHL+FGI +I + E+P L T EF ++ + ++ A LE Y +P+ +G+
Sbjct: 214 LKDESLHLSFGIHLITTLLEEHPELMTPEFAREVKGLILRAVELERDYNRALLPRPILGV 273
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A Y++++ +RR ++GL P F T NP WM+ +D+ + NFFE R Y+ A
Sbjct: 274 SADYLNAYIEYVTDRRLDELGLGPHFG-TPNPAQWMATEVDVPEIVNFFEARNIHYEVAA 332
>gi|32266105|ref|NP_860137.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
hepaticus ATCC 51449]
gi|32262154|gb|AAP77203.1| ribonucleoside diphosphate reductase [Helicobacter hepaticus ATCC
51449]
Length = 349
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++I+ ++ E HL+T +++ M +A +E + +GL
Sbjct: 225 RDEVTHLLLFQNMISSLRKEQGHLFTPSLEEEVVEMFKKAVEIESQWGEYITQGQILGLT 284
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
+ +Y+Q++A+ R +GL L+ ++NP W+ + ++ NFFE +VT Y +G+
Sbjct: 285 SEIIREYIQYLADARLKAVGLPQLYG-SKNPIKWVDQFASFNDQKTNFFEAKVTNYSKGS 343
Query: 121 ELKWD 125
D
Sbjct: 344 INFDD 348
>gi|160942848|ref|ZP_02090088.1| hypothetical protein FAEPRAM212_00325 [Faecalibacterium prausnitzii
M21/2]
gi|158445900|gb|EDP22903.1| hypothetical protein FAEPRAM212_00325 [Faecalibacterium prausnitzii
M21/2]
Length = 347
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I +++ E P L+T E Q R M+ E EIA+ H + GLN
Sbjct: 219 RDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWGHYVIGDDIPGLN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N R +G L+ E W+S+ D + +FFE R T Y
Sbjct: 279 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 338
Query: 118 QGAELKWD 125
+ L D
Sbjct: 339 KSTALIDD 346
>gi|159040364|ref|YP_001539617.1| ribonucleoside-diphosphate reductase [Salinispora arenicola
CNS-205]
gi|157919199|gb|ABW00627.1| Ribonucleoside-diphosphate reductase [Salinispora arenicola
CNS-205]
Length = 350
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 78/126 (61%), Gaps = 4/126 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES+H+ F DV++ I+ E P L+ + +++ + M+ EA E +A + + +G GL+
Sbjct: 224 RDESMHMAFAFDVVDTIRAEEPDLFDADLERQIKDMVTEAVDCEAQFAEDLLEQGVSGLS 283
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
+Y+Q +A+RR +G+ P++ ++NPF +M E+ D+++ NFFE RV+ YQ G
Sbjct: 284 LADMREYLQHVADRRLVTLGIAPIYG-SQNPFAFM-ELQDVQELSNFFERRVSAYQVGVS 341
Query: 120 AELKWD 125
+ +D
Sbjct: 342 GSVTFD 347
>gi|323143005|ref|ZP_08077711.1| ribonucleoside-diphosphate reductase, beta subunit [Succinatimonas
hippei YIT 12066]
gi|322417199|gb|EFY07827.1| ribonucleoside-diphosphate reductase, beta subunit [Succinatimonas
hippei YIT 12066]
Length = 331
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 61
DE+LH I + + +NP LW + + ++ + LE ++ + L
Sbjct: 201 DETLHTESMIKLFREYIEQNPQLWNDDLKSTIYSIAEKMVELEDSFIDLAFGVNQMQKLA 260
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA- 120
++Y++FIA+RR +G++ +F +NP PW+ ++ NFFE RV +Y +GA
Sbjct: 261 KEDVKKYIRFIADRRLSAMGMKAIFNEKKNPLPWVDAML-GVTHTNFFENRVVDYAKGAL 319
Query: 121 ELKW 124
W
Sbjct: 320 SGDW 323
>gi|313894221|ref|ZP_07827786.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
oral taxon 158 str. F0412]
gi|313441045|gb|EFR59472.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
oral taxon 158 str. F0412]
Length = 342
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++I +++ E P L+T E ++K M+ + T EIA+ +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEEKITDMIRQGTENEIAWGQYITDDKILGLN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
E+Y++++AN R IGL L+ +NP W+ +L + +FFE +VT Y +
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333
Query: 120 AELKWD 125
A +D
Sbjct: 334 AAFDFD 339
>gi|313115920|ref|ZP_07801347.1| ribonucleoside-diphosphate reductase, beta subunit
[Faecalibacterium cf. prausnitzii KLE1255]
gi|310621684|gb|EFQ05212.1| ribonucleoside-diphosphate reductase, beta subunit
[Faecalibacterium cf. prausnitzii KLE1255]
Length = 347
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I +++ E P L+T E Q R M+ E EIA+ H + GLN
Sbjct: 219 RDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWGHYVIGDDIPGLN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N R +G L+ E W+S+ D + +FFE R T Y
Sbjct: 279 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 338
Query: 118 QGAELKWD 125
+ L D
Sbjct: 339 KSTALIDD 346
>gi|291562343|emb|CBL41159.1| Ribonucleotide reductase, beta subunit [butyrate-producing
bacterium SS3/4]
Length = 346
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I +++ E P L+T Q R M+ E EIA+ H + GLN
Sbjct: 218 RDENTHLWLFRNIITELQKEQPELFTAGSVQALREMMREGVEQEIAWGHYVIGDDIPGLN 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N R +G L+ E W+S+ D + +FFE R T Y
Sbjct: 278 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 337
Query: 118 QGAELKWD 125
+ L D
Sbjct: 338 KSTALIDD 345
>gi|295103295|emb|CBL00839.1| Ribonucleotide reductase, beta subunit [Faecalibacterium
prausnitzii SL3/3]
Length = 347
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I +++ E P L+T E Q R M+ E EIA+ H + GLN
Sbjct: 219 RDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWGHYVIGDDIPGLN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N R +G L+ E W+S+ D + +FFE R T Y
Sbjct: 279 RQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVKTDFFEARSTAYA 338
Query: 118 QGAELKWD 125
+ L D
Sbjct: 339 KSTALIDD 346
>gi|313903043|ref|ZP_07836438.1| Ribonucleoside-diphosphate reductase [Thermaerobacter subterraneus
DSM 13965]
gi|313466767|gb|EFR62286.1| Ribonucleoside-diphosphate reductase [Thermaerobacter subterraneus
DSM 13965]
Length = 336
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
++DESLHL+FGI +I + E+P L T F ++ + ++ A LE Y +P+ +G+
Sbjct: 214 LKDESLHLSFGIHLITALLEEHPELMTPAFAREVKGLILRAVELERDYNRALLPRPILGV 273
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A Y++++ +RR ++GL P F T NP WM+ +D+ + NFFE R Y+ A
Sbjct: 274 SADYLNAYVEYVTDRRLDELGLGPHFG-TPNPAKWMATEVDVPEIVNFFEARNIHYEVAA 332
>gi|269798663|ref|YP_003312563.1| ribonucleotide reductase [Veillonella parvula DSM 2008]
gi|294792661|ref|ZP_06757808.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
6_1_27]
gi|269095292|gb|ACZ25283.1| ribonucleotide reductase [Veillonella parvula DSM 2008]
gi|294456560|gb|EFG24923.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
6_1_27]
Length = 342
Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++I +++ E P L+T E + K M+ + EIA+ +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
E+Y++++AN R IGL L+ +NP W+ +L + +FFE +VT Y +
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333
Query: 120 AELKWD 125
A +D
Sbjct: 334 AAFDFD 339
>gi|329888543|ref|ZP_08267141.1| ribonucleotide reductase, small chain family protein [Brevundimonas
diminuta ATCC 11568]
gi|328847099|gb|EGF96661.1| ribonucleotide reductase, small chain family protein [Brevundimonas
diminuta ATCC 11568]
Length = 348
Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDESLH I + + E TK +E + G
Sbjct: 201 VRDESLHCEGIIKLYHAFNKETG-AVTKAVADDIVDCCKTVIEMEDKFIDLAFEMGPVNG 259
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ + Y++FIA+ R Q+ L ++ TENP PW+ ++ + NFFE R TEY +
Sbjct: 260 MTPDDIKAYIRFIADWRLRQLHLPEVYGVTENPLPWLQALLSGVEHANFFEARATEYSKA 319
Query: 120 AE 121
A
Sbjct: 320 AT 321
>gi|155122339|gb|ABT14207.1| hypothetical protein MT325_M653L [Paramecium bursaria chlorella
virus MT325]
Length = 326
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH FG + +++ K + + ++ EA E + E +P +G+N
Sbjct: 202 RDEGLHQQFGELLYSKL-------ENKLSLAQVKAIVEEAVANEKEFICEAIPCRMIGMN 254
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+A+R +G + NPF +M E+I L+ + NFFE RV+EYQ+
Sbjct: 255 SELMGQYLEFVADRIFVALGHPKQYN-ATNPFDFM-ELISLEGKSNFFERRVSEYQRPGV 312
Query: 122 LK 123
+
Sbjct: 313 MN 314
>gi|303228685|ref|ZP_07315510.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
atypica ACS-134-V-Col7a]
gi|303230495|ref|ZP_07317254.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
atypica ACS-049-V-Sch6]
gi|302514861|gb|EFL56844.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
atypica ACS-049-V-Sch6]
gi|302516665|gb|EFL58582.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
atypica ACS-134-V-Col7a]
Length = 342
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++I +++ E P L+T E + K M+ + EIA+ +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
E+Y++++AN R IGL L+ +NP W+ +L + +FFE +VT Y +
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333
Query: 120 AELKWD 125
A +D
Sbjct: 334 AAFDFD 339
>gi|197322443|ref|YP_002154716.1| putative ribonucleotide reductase small subunit [Feldmannia species
virus]
gi|197130510|gb|ACH46846.1| putative ribonucleotide reductase small subunit [Feldmannia species
virus]
Length = 342
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH + + N +K P + +AT +E + E +P +G+N
Sbjct: 217 RDEGLHAEGSVMIYNHLKHRLP-------VAVVHDIFGQATTIEKEFIREALPVSLIGIN 269
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A + Y+++I++ ++G LF ++NPF WM+ +I ++ + NFFE RV EY +
Sbjct: 270 AGTMSTYIEYISDFWLEKLGYPKLFN-SKNPFEWMT-MIGMEGKSNFFEGRVAEYSKAGS 327
Query: 122 LK 123
+
Sbjct: 328 MT 329
>gi|88608725|ref|YP_506404.1| ribonucleotide-diphosphate reductase subunit beta [Neorickettsia
sennetsu str. Miyayama]
gi|88600894|gb|ABD46362.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
sennetsu str. Miyayama]
Length = 322
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
+RDE+LH N + +EN + + + + R + + E A+ G
Sbjct: 189 VRDETLHSNSITKLFRTFLLENN-IDKFKLEAEIREICNAMVHHEDAFIDLAFEMGDVEG 247
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L A ++Y+++IAN R Q+G +++ NP W+ V++ + NFFE + TEY +
Sbjct: 248 LKASEVKEYIRYIANLRLKQLGFSEIYEQKVNPLLWLEAVLNTVEHTNFFENKATEYSKA 307
Query: 120 AE-LKWD 125
A WD
Sbjct: 308 ATKGTWD 314
>gi|34482564|emb|CAE09564.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN [Wolinella
succinogenes]
Length = 283
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN +K E P L+TK +++ M +A +E A+ +GL
Sbjct: 159 RDEVTHLLIFQNMINALKKERPDLFTKSLEEEVVEMFRKAVAVESAWGDYITQGQILGLT 218
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
+ +Y+Q++A+ R ++G+ L+ ++P W+ + + + NFFE VT Y +G+
Sbjct: 219 SEIIHEYIQYLADDRLKRVGMPILYN-AKHPIKWVDQFSSFNEQKTNFFEGNVTNYAKGS 277
Query: 121 ELKWD 125
D
Sbjct: 278 INFDD 282
>gi|238018468|ref|ZP_04598894.1| hypothetical protein VEIDISOL_00295 [Veillonella dispar ATCC 17748]
gi|237864939|gb|EEP66229.1| hypothetical protein VEIDISOL_00295 [Veillonella dispar ATCC 17748]
Length = 342
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++I +++ E P L+T E + K M+ + EIA+ +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWGQYITDDKILGLN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
E+Y++++AN R IGL L+ +NP W+ +L + +FFE +VT Y +
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333
Query: 120 AELKWD 125
A +D
Sbjct: 334 AAFDFD 339
>gi|16124515|ref|NP_419079.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter
crescentus CB15]
gi|221233200|ref|YP_002515636.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter
crescentus NA1000]
gi|13421393|gb|AAK22247.1| ribonucleoside-diphosphate reductase, beta subunit [Caulobacter
crescentus CB15]
gi|220962372|gb|ACL93728.1| ribonucleoside-diphosphate reductase beta chain [Caulobacter
crescentus NA1000]
Length = 347
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDESLH + I + + E TK +E + G
Sbjct: 198 IRDESLHCDGIIKLYHAFNKETG-AVTKAVADDIVDCCKTVVGMEDNFIDLAFEAGDIQG 256
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ + Y++F+A+ R Q+ L ++ ENP PW+ ++ + NFFE R TEY +
Sbjct: 257 MTPDDIKAYIRFVADWRLRQLHLPEVYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 316
Query: 120 AE-LKW 124
A +W
Sbjct: 317 ATKGQW 322
>gi|68304258|ref|YP_249726.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
gi|67973087|gb|AAY84053.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
Length = 318
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F N+ E K + K +M EA +E + +P +G+N
Sbjct: 194 RDEGLHTDFACLYYNKYIPE----KNKLSKTKVLSMFVEAVDIEKDFFTNALPVAMLGMN 249
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ S +Y++F+A+R ++G + F NPF +M+ I L+ + NFFE RV EY++
Sbjct: 250 SQSMCEYIEFVADRLLFELGYDKHFNTA-NPFEFMNN-ISLEGKTNFFEKRVGEYKRFGA 307
Query: 122 LK 123
Sbjct: 308 AN 309
>gi|307328555|ref|ZP_07607729.1| Ribonucleoside-diphosphate reductase [Streptomyces violaceusniger
Tu 4113]
gi|306885823|gb|EFN16835.1| Ribonucleoside-diphosphate reductase [Streptomyces violaceusniger
Tu 4113]
Length = 340
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES+H+ F V++ ++ E P L+ E +Q+ ML EA E+ +A + G G+N
Sbjct: 214 RDESMHMEFAFSVVDTVREEEPDLFDDELRQQVTDMLKEAVEAELQFARDLCGDGLPGMN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S ++Y+Q +A++R ++G +F +ENPF +M E+ ++++ NFFE R + YQ E
Sbjct: 274 TASMQEYLQCVADQRLMRLGFPAVFG-SENPFSFM-ELQNVQELTNFFERRASAYQVAVE 331
Query: 122 LK 123
Sbjct: 332 GS 333
>gi|294794440|ref|ZP_06759576.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
3_1_44]
gi|294454770|gb|EFG23143.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
3_1_44]
Length = 342
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++I +++ E P L+T E + K M+ + T EIA+ +GLN
Sbjct: 214 RDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGTENEIAWGQYITDDKILGLN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
E+Y++++AN R IGL L+ +NP W+ +L + +FFE +VT Y +
Sbjct: 274 NVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKA 333
Query: 120 AELKWD 125
A +D
Sbjct: 334 AAFDFD 339
>gi|131840053|ref|YP_001096062.1| ORF23 [Cyprinid herpesvirus 3]
gi|84181618|gb|ABC55221.1| hypothetical protein [Cyprinid herpesvirus 3]
gi|109706628|gb|ABG42854.1| ORF23 [Cyprinid herpesvirus 3]
gi|129560539|dbj|BAF48834.1| ribonucleotide reductase small chain [Cyprinid herpesvirus 3]
Length = 335
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 8/124 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL K +++ R ++ EA +E + +++P VG+N
Sbjct: 208 RDEGLHRDFACLLFS------SHLRHKPSKERVRAIITEAVEIEKEFLTQSLPVSLVGMN 261
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+Y+Q++A+ Q+GL L+ T PF +M E I L+ + NFFE RV +YQ
Sbjct: 262 HDLMCKYIQYVADHLLCQMGLSRLYN-TPCPFDFM-ENISLEGKTNFFEKRVADYQVKTT 319
Query: 122 LKWD 125
D
Sbjct: 320 STVD 323
>gi|227871657|ref|ZP_03990072.1| ribonucleoside-diphosphate reductase [Oribacterium sinus F0268]
gi|227842499|gb|EEJ52714.1| ribonucleoside-diphosphate reductase [Oribacterium sinus F0268]
Length = 347
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL F +++ ++K E P L+ + + M+ + EIA+ + GLN
Sbjct: 219 RDENTHLWFFRNMLLELKKEEPELFDEAHIAEITEMVKKGVEQEIAWGQYVIGDSIPGLN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
E Y++++ N R +GL L++ E W+S+ D + +FFE R T Y
Sbjct: 279 GKMVEDYIRYLGNLRYRSLGLPNLYEGYEKEPESMKWVSQYADANMVKTDFFEARSTAYA 338
Query: 118 QGAELKWD 125
+ ++ D
Sbjct: 339 KSTAIEDD 346
>gi|318060206|ref|ZP_07978929.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actG]
gi|318077113|ref|ZP_07984445.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actF]
Length = 345
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 73/126 (57%), Gaps = 4/126 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H++F DV++ ++ E P L+ + + + + ML A E+ +A + G G+N
Sbjct: 219 RDETMHMSFAFDVVDTVRKEEPELFDDKLEAEVKEMLAGAVDAELQFARDLCGDGLPGMN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
S +Y+Q +A++R ++G P++ + NPF +M E+ +++ NFFE R + YQ
Sbjct: 279 TESMREYLQCVADQRLVRLGFSPVYG-SSNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 336
Query: 120 AELKWD 125
+ +D
Sbjct: 337 GSVSFD 342
>gi|302521843|ref|ZP_07274185.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. SPB78]
gi|302430738|gb|EFL02554.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. SPB78]
Length = 345
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 73/126 (57%), Gaps = 4/126 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H++F DV++ ++ E P L+ + + + + ML A E+ +A + G G+N
Sbjct: 219 RDETMHMSFAFDVVDTVRKEEPELFDDKLEAEVKEMLAGAVDAELQFARDLCGDGLPGMN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
S +Y+Q +A++R ++G P++ + NPF +M E+ +++ NFFE R + YQ
Sbjct: 279 TESMREYLQCVADQRLVRLGFSPVYG-SSNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 336
Query: 120 AELKWD 125
+ +D
Sbjct: 337 GSVSFD 342
>gi|313768358|ref|YP_004062038.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
gi|312599054|gb|ADQ91078.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
Length = 388
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 66/124 (53%), Gaps = 12/124 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH F +++ ++ K + +++ EA +E + + +P +G+N
Sbjct: 267 RDEGLHQEFAVELFKLLR-------NKPSTETIHSIVKEAVEIEKNFILDALPCNLIGMN 319
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +Y++++++R Q+G P++ ++NPF +M E I L + NFFE RV +Y +
Sbjct: 320 SEKMSEYIEYVSDRLLKQVGQPPIWN-SKNPFDFM-ENISLDGKTNFFEKRVGDY---GK 374
Query: 122 LKWD 125
L D
Sbjct: 375 LDDD 378
>gi|282174133|ref|YP_003358235.1| ORF96 [Anguillid herpesvirus 1]
gi|281308976|gb|ADA57859.1| ORF96 [Anguillid herpesvirus 1]
Length = 328
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + H+ K ++ ++ EA +E + E +P +G+N
Sbjct: 202 RDEGLHCDFACLLFK------DHILGKPGYERVSQIVTEAVEIEKEFLSEALPVRLLGIN 255
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
Y++F+A+R +G + + +NPF +M I ++ + NFFE V++Y++
Sbjct: 256 CEQMCSYIEFVADRLLAALGFPKRY-HVKNPFGFMES-ISMEGKTNFFEKNVSQYKK 310
>gi|227498392|ref|ZP_03928542.1| ribonucleoside-diphosphate reductase [Acidaminococcus sp. D21]
gi|226903854|gb|EEH89772.1| ribonucleoside-diphosphate reductase [Acidaminococcus sp. D21]
Length = 342
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL +++ +++ E P L+TKE M+ + EI + +GLN
Sbjct: 214 RDEVTHLILFQNILRELRHERPDLFTKEQDAHIADMIRQGAENEIKWGQYITDDKILGLN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
E+Y++++AN R IGL PL+ ++NP W+ +L + +FFE +VT Y +
Sbjct: 274 NGLIEKYIKYLANIRLEAIGLAPLYPEISQNPMEWIESFSNLNGTKTDFFEAKVTNYTKA 333
Query: 120 AELKWD 125
A +D
Sbjct: 334 AAFDFD 339
>gi|225873704|ref|YP_002755163.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium
capsulatum ATCC 51196]
gi|225791613|gb|ACO31703.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium
capsulatum ATCC 51196]
Length = 340
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES HL F +V+N ++ + P LW + + MLHEA E +A + + G GL+
Sbjct: 214 RDESCHLEFAFEVVNVVRSQEPDLWDAQLEADIVEMLHEAVDAETQFAEDLLSGGVAGLS 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY+ ++A+ R ++G+ P F +NPF +M E+ D+++ NFFE RV+ YQ
Sbjct: 274 VRDMRQYLGYVADSRLQRLGIAPAFGV-KNPFSFM-ELQDVQELTNFFERRVSAYQTAVA 331
Query: 122 LK 123
+
Sbjct: 332 GE 333
>gi|51891459|ref|YP_074150.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium
thermophilum IAM 14863]
gi|51855148|dbj|BAD39306.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium
thermophilum IAM 14863]
Length = 346
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ +++N ++ E P L+T + R M+ +A E+A+A + GL+
Sbjct: 220 RDEITHVAVFQNILNGLRQERPQLFTPQLDADLRAMIRQAAEHEMAWAAYCVGNRIQGLS 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
+ Y++ +A++R +G EPL+ NP W+ +L + +FFETRVT Y +
Sbjct: 280 GEVLQGYVKHLADQRARALGFEPLYGNHPNPIKWVESFSNLNQTKADFFETRVTNYAKST 339
Query: 121 ELKWD 125
+ D
Sbjct: 340 NIDLD 344
>gi|6969682|gb|AAF33894.1| TF4L [Vaccinia virus Tian Tan]
Length = 319
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE L +F + HL ++ R+++ +A +E + +P +G+N
Sbjct: 195 RDEGLRCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFLTAALPVKLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
E Y++F+A+R ++G + ++ T NPF +M E I L+ + NFFE RV EYQQ
Sbjct: 248 CEMMETYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFFEKRVGEYQQMGV 305
Query: 122 LK 123
+
Sbjct: 306 MS 307
>gi|329939692|ref|ZP_08288993.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
griseoaurantiacus M045]
gi|329301262|gb|EGG45157.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
griseoaurantiacus M045]
Length = 347
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H++F DV++ ++ E P L+ +E ++ ML EA E+ +A + G G+N
Sbjct: 221 RDETMHMSFAFDVVDTVRKEEPGLFDEELGRQVTDMLREAVEAELQFARDLCGDGLPGMN 280
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S QY+Q +A++R ++G P++ +ENPF +M E+ +++ NFFE R + YQ E
Sbjct: 281 TESMRQYLQCVADQRLVRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRASAYQVAVE 338
Query: 122 LK 123
Sbjct: 339 GS 340
>gi|323692021|ref|ZP_08106269.1| ribonucleoside-diphosphate reductase [Clostridium symbiosum
WAL-14673]
gi|323503944|gb|EGB19758.1| ribonucleoside-diphosphate reductase [Clostridium symbiosum
WAL-14673]
Length = 347
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I +++ E P L+++E R M+ E EIA+ + GL
Sbjct: 219 RDENTHLWLFGSIIRELQTEEPSLFSREKTDCYREMIREGCEQEIAWGCYAIGDEVPGLT 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N RC +G EPL+ + W+S+ + + +FFE R T Y
Sbjct: 279 KQMITDYIRYLGNLRCSNLGFEPLYDGYVHEPETMAWVSQYSNANMIKTDFFEARSTAYA 338
Query: 118 QGAELKWD 125
+ + L D
Sbjct: 339 KSSALVDD 346
>gi|323486976|ref|ZP_08092290.1| hypothetical protein HMPREF9474_04041 [Clostridium symbiosum
WAL-14163]
gi|323399688|gb|EGA92072.1| hypothetical protein HMPREF9474_04041 [Clostridium symbiosum
WAL-14163]
Length = 347
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I +++ E P L+++E R M+ E EIA+ + GL
Sbjct: 219 RDENTHLWLFGSIIRELQTEEPSLFSREKTDCYREMIREGCEQEIAWGCYAIGDEVPGLT 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N RC +G EPL+ + W+S+ + + +FFE R T Y
Sbjct: 279 KQMITDYIRYLGNLRCSNLGFEPLYDGYAHEPETMAWVSQYSNANMIKTDFFEARSTAYA 338
Query: 118 QGAELKWD 125
+ + L D
Sbjct: 339 KSSALVDD 346
>gi|238023979|ref|YP_002908211.1| Ribonucleotide reductase subunit beta [Burkholderia glumae BGR1]
gi|237878644|gb|ACR30976.1| Ribonucleotide reductase, beta subunit [Burkholderia glumae BGR1]
Length = 337
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 50/124 (40%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
MRDE LH FGI VI Q+ E + + + EA E AYA + +G
Sbjct: 216 MRDEVLHCGFGIRVIRQLLEEE---HLRLDPHAVQQIWEEAEAAERAYAQYILRDPILGY 272
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A + +FIANRR Q+ + F N PW+ E +L+KEKNFFETRVT+YQ G
Sbjct: 273 SAELHCEQFRFIANRRATQLSMPAPFPGATNALPWLDEQANLRKEKNFFETRVTDYQSGG 332
Query: 121 ELKW 124
L W
Sbjct: 333 ALDW 336
>gi|165969130|ref|YP_001651030.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
gi|164663626|gb|ABY65846.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
Length = 339
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH NF N+ E + + + M EA +E + +P +G+N
Sbjct: 215 RDEGLHTNFACLYYNEYIDERDKMSS----AEILDMFVEAVNIEKEFFTSALPCDLLGMN 270
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ + +Y++F+A+R ++ F T NPF +M+ I L+ + NFFE RV EY++
Sbjct: 271 SRAMCEYIEFVADRLLTELQQPKHFN-TPNPFNFMNN-ISLEGKTNFFERRVGEYKRFGA 328
Query: 122 LKW 124
Sbjct: 329 GAD 331
>gi|269866693|ref|XP_002652360.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220062665|gb|EED41696.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 211
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + I + ++ EA +E + E++P +G+N
Sbjct: 89 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 139
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G
Sbjct: 140 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 195
>gi|322510876|gb|ADX06189.1| putative ribonucleotide reductase small subunit [Organic Lake
phycodnavirus 2]
Length = 324
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 70/118 (59%), Gaps = 9/118 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+LH F + + N+++ + +K R ++ EA +E + + +P +G+N
Sbjct: 201 RDEALHTEFAVYLYNRLEKKLNK-------KKVREIIEEAVTIEKEFIVDALPCRMIGMN 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ QY++F+A+R Q+G + ++ T NPF +M E+I L+++ NFFE+RV+EY
Sbjct: 254 SELMTQYIEFVADRLMMQLGCDVIY-ATNNPFDFM-ELISLEQKTNFFESRVSEYSLA 309
>gi|311696539|gb|ADP99412.1| ribonucleotide-diphosphate reductase beta subunit [marine bacterium
HP15]
Length = 352
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/124 (41%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H +FG+ V+NQI E + R M E+ E AYA + +G
Sbjct: 232 LRDEAMHFSFGLKVVNQIVEEEN---ITFDPKAVREMWDESEAAEKAYADYILRDPILGY 288
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A + +F+ANRR +GLE F +N PW+ E L+KEKNFFETRV EYQ GA
Sbjct: 289 SAEYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFFETRVIEYQTGA 348
Query: 121 ELKW 124
+L+W
Sbjct: 349 QLEW 352
>gi|209170936|ref|YP_002268082.1| agip52 [Agrotis ipsilon multiple nucleopolyhedrovirus]
gi|208436527|gb|ACI28754.1| ribonucleotide reductase-2B [Agrotis ipsilon multiple
nucleopolyhedrovirus]
Length = 313
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F E K +M EA +E + +P +G+N
Sbjct: 191 RDEGLHTDFACLYYKTRVTE------KLDSDTILSMFKEAVAIEKEFFTAALPVELLGMN 244
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A S +Y++F+A+R Q+G F NPF +M+ I L+ + NFFE RV EY++
Sbjct: 245 AQSMCEYIEFVADRLLVQLGQPKYFN-ARNPFEFMNN-ISLEGKTNFFEKRVGEYKRFGA 302
Query: 122 LKW 124
+
Sbjct: 303 GED 305
>gi|154505112|ref|ZP_02041850.1| hypothetical protein RUMGNA_02625 [Ruminococcus gnavus ATCC 29149]
gi|153794591|gb|EDN77011.1| hypothetical protein RUMGNA_02625 [Ruminococcus gnavus ATCC 29149]
Length = 347
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I ++K E P L+T E + + ML E EIA+ H + GL
Sbjct: 219 RDENTHLWLFRNMILEMKKELPELFTPEHIEILKEMLKEGVRQEIAWGHYVIGNQIAGLT 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
+Y+Q++ N R +G +P++ + W+S+ + + +FFE + T Y
Sbjct: 279 KEMITEYIQYLGNLRFTNLGFDPIYPDQTQEPDSMRWVSQYSNANMVKTDFFEAKSTAYA 338
Query: 118 QGAELKWD 125
+ L D
Sbjct: 339 KSTALIDD 346
>gi|302542646|ref|ZP_07294988.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
hygroscopicus ATCC 53653]
gi|302460264|gb|EFL23357.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
himastatinicus ATCC 53653]
Length = 343
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 73/126 (57%), Gaps = 4/126 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES+H+ F V++ ++ E P L+ + +++ ML EA E+ +AH+ G G+N
Sbjct: 217 RDESMHMEFAFSVVDTVREEEPDLFDDDLERQVTDMLKEAVEAELQFAHDLCGDGLPGMN 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
S Y++ +A++R ++G +F +ENPF +M E+ D+++ NFFE R + YQ
Sbjct: 277 TESMRAYLECVADQRLARLGFPAVFG-SENPFSFM-ELQDVQELTNFFERRASAYQVAVE 334
Query: 120 AELKWD 125
+ +D
Sbjct: 335 GSVSFD 340
>gi|161760549|ref|NP_906664.2| ribonucleotide-diphosphate reductase subunit beta [Wolinella
succinogenes DSM 1740]
Length = 341
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN +K E P L+TK +++ M +A +E A+ +GL
Sbjct: 217 RDEVTHLLIFQNMINALKKERPDLFTKSLEEEVVEMFRKAVAVESAWGDYITQGQILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
+ +Y+Q++A+ R ++G+ L+ ++P W+ + + + NFFE VT Y +G+
Sbjct: 277 SEIIHEYIQYLADDRLKRVGMPILYN-AKHPIKWVDQFSSFNEQKTNFFEGNVTNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 INFDD 340
>gi|42523460|ref|NP_968840.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
bacteriovorus HD100]
gi|39575666|emb|CAE79833.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
bacteriovorus HD100]
Length = 336
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 74/126 (58%), Gaps = 4/126 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES+H+ F I+V+ + E P L+ ++ + ML +A E+ +AH+ + G GL+
Sbjct: 210 RDESMHMAFAIEVVKTARKEEPELFNQQMEDMVVQMLEDAIECEMEFAHDVLNLGVAGLS 269
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
A QY+++ A++R + + P + +NPF +M E+ D+++ NFFE RV+ YQ G
Sbjct: 270 AKDMRQYLEYCADQRLESLNIAPRYNV-KNPFIFM-ELQDMQELANFFERRVSAYQTGVS 327
Query: 120 AELKWD 125
+ +D
Sbjct: 328 GAVAFD 333
>gi|152993970|ref|YP_001359691.1| ribonucleotide-diphosphate reductase subunit beta [Sulfurovum sp.
NBC37-1]
gi|151425831|dbj|BAF73334.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp.
NBC37-1]
Length = 339
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN K E P L+TKE M +A LE + +GL
Sbjct: 215 RDEVTHLLLFQNMINATKRERPELFTKELIDDVYQMFRDAVKLECEWGTYITQGQILGLT 274
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
EQY+Q++A++R H +GLE ++ E+P W+ ++ NFFE VT Y +G+
Sbjct: 275 NEIIEQYIQYLADKRLHAVGLEKIYNV-EHPIKWVDNFSQFNDQKTNFFEGNVTNYSKGS 333
Query: 121 ELKWD 125
D
Sbjct: 334 LDLDD 338
>gi|269865627|ref|XP_002651990.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063361|gb|EED42066.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 290
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 11/118 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + I + ++ EA +E + E++P +G+N
Sbjct: 168 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 218
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R T YQ+G
Sbjct: 219 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERRETNYQKG 274
>gi|295836584|ref|ZP_06823517.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. SPB74]
gi|197697282|gb|EDY44215.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. SPB74]
Length = 345
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 74/126 (58%), Gaps = 4/126 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H++F DV++ ++ E P L+ E +Q+ + ML A E+ +A + G G+N
Sbjct: 219 RDETMHMSFAFDVVDTVRKEEPELFDAELEQEVKDMLDGAVNAELQFARDLCGDGLPGMN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
S +Y+Q +A++R ++G P++ + NPF +M E+ +++ NFFE R + YQ
Sbjct: 279 TESMREYLQCVADQRLQRLGFAPVYG-SSNPFSFM-ELQGVQELTNFFERRPSAYQVAVE 336
Query: 120 AELKWD 125
+ +D
Sbjct: 337 GSVSFD 342
>gi|74229799|ref|YP_309003.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
gi|72259713|gb|AAZ67484.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
Length = 318
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F N+ + L + K M EA +E + +P +G+N
Sbjct: 194 RDEGLHTDFACLYYNKYIAKEDKL----SESKVLNMFKEAVDIEKDFFTNALPVAMLGMN 249
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A S +Y++F+A+R ++G E FK T NPF +M+ I L+ + NFFE RV EY++
Sbjct: 250 AHSMCEYIEFVADRLLIELGYEKYFK-TLNPFEFMNN-ISLEGKTNFFEKRVGEYKRFGA 307
Query: 122 LK 123
Sbjct: 308 AN 309
>gi|315452596|ref|YP_004072866.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter felis
ATCC 49179]
gi|315131648|emb|CBY82276.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter felis
ATCC 49179]
Length = 347
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL +I+ +K E P L++K+ ++ M EA LE + + LN
Sbjct: 223 RDEVTHLALFQSMIHTLKKERPDLFSKDLVEEILEMFKEAVDLESTWGRVITQGEILDLN 282
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ Y++++A+ R H IGL ++ +T++P W+ + + NFFE RV+ Y +G+
Sbjct: 283 PVTLRAYIEYLADTRLHAIGLPKIY-HTKHPMRWVDQFSSFNSQRSNFFEARVSNYSKGS 341
>gi|269865926|ref|XP_002652096.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063168|gb|EED41960.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 330
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + I + ++ EA +E + E++P +G+N
Sbjct: 219 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 269
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G
Sbjct: 270 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 325
>gi|313844096|ref|YP_004061759.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
gi|312599481|gb|ADQ91503.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
Length = 408
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 66/117 (56%), Gaps = 9/117 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH F +++ ++I K + +++ EA +E + + +P +G+N
Sbjct: 287 RDEGLHQEFAVELFKLLRI-------KPTTETIHSIVKEAVEIEKGFILDALPCALIGMN 339
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ +Y++++++R QIG+ P++ ++NPF +M E I L + NFFE RV +Y +
Sbjct: 340 SEKMSEYIEYVSDRLLKQIGVPPIWN-SKNPFDFM-ENISLDGKTNFFEKRVGDYGK 394
>gi|120556760|ref|YP_961111.1| ribonucleoside-diphosphate reductase [Marinobacter aquaeolei VT8]
gi|120326609|gb|ABM20924.1| Ribonucleoside-diphosphate reductase [Marinobacter aquaeolei VT8]
Length = 352
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H +FG+ V+NQI E + R M E+ E+AYA+ + +G
Sbjct: 232 LRDEAMHFSFGLKVVNQILEEE---KITLDPKAVREMWDESEAAEMAYANYVLRDPILGY 288
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A + +F+ANRR +GLE F +N PW+ E L+KEKNFFETRV EYQ GA
Sbjct: 289 SAEYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFFETRVIEYQTGA 348
Query: 121 ELKW 124
+L+W
Sbjct: 349 QLEW 352
>gi|254517517|ref|ZP_05129573.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium sp.
7_2_43FAA]
gi|226911266|gb|EEH96467.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium sp.
7_2_43FAA]
Length = 344
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +++ ++++E P ++T E + + + M+ A EI++ + + G+N
Sbjct: 218 RDENTHLWLFRNILKELQLEQPEIFTDEVKNQLKEMMKTAVEHEISWGNYVIGDNIQGIN 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
Y++++ N R IGL+ +++ + NP W+ + D + +FFE + T Y +
Sbjct: 278 KNLINDYIKYLGNLRMKAIGLDAIYEGHDNNPAAWVDILSDANSVKTDFFEAKSTAYAKA 337
Query: 120 AELKWD 125
L D
Sbjct: 338 GALIDD 343
>gi|226950223|ref|YP_002805314.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum A2 str. Kyoto]
gi|226843961|gb|ACO86627.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum A2 str. Kyoto]
Length = 342
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++I ++K ENPH++T+E +++ R M+ EI + +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENPHIFTEELEEEFRQMMRIGVEHEIQWGQYVTNNEILGLN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
E+Y+++++N R IGL+PL+ + ++P W+ L + +FFE +VT Y +
Sbjct: 274 DELIEKYIKYLSNLRLVAIGLKPLYLEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333
Query: 120 AELKWD 125
A +D
Sbjct: 334 AAFDFD 339
>gi|115378653|ref|ZP_01465803.1| ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
aurantiaca DW4/3-1]
gi|115364319|gb|EAU63404.1| ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
aurantiaca DW4/3-1]
Length = 288
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES H+ F + I + E P L+ Q M+ EA E +A + + G GL+
Sbjct: 158 RDESTHMAFAFEAIRVARQEEPDLFDARMQADVVAMMREAVECETLFAQDLLSGGVAGLS 217
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
QY++++A++R +GL P+F +N P+M + D+++ NFFE RV+ YQ
Sbjct: 218 VQEMRQYLEYVADQRLTMLGLAPVF-RVKNSLPFMD-LQDVQELTNFFERRVSAYQVA 273
>gi|38683666|gb|AAR26843.1| FirrV-1-A19 [Feldmannia irregularis virus a]
Length = 342
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 11/126 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH + + N +K P + +A LE + E++P +G+N
Sbjct: 217 RDEGLHAEGSVMIYNHLKHRLP-------VAVVHDIFTDAVALEKEFIRESLPVSLIGIN 269
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A + Y++++++ ++G LF T+NPF WM+ +I ++ + NFFE RV EY +
Sbjct: 270 ADTMSSYIEYVSDFWIQRLGYPKLFG-TKNPFEWMT-MIGMEGKSNFFEGRVAEYAKAGS 327
Query: 122 L--KWD 125
+ + D
Sbjct: 328 MTNEDD 333
>gi|148273612|ref|YP_001223173.1| ribonucleotide-diphosphate reductase subunit beta [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|170782700|ref|YP_001711034.1| ribonucleotide-diphosphate reductase subunit beta [Clavibacter
michiganensis subsp. sepedonicus]
gi|147831542|emb|CAN02508.1| putative ribonucleoside-diphosphate reductase beta subunit
[Clavibacter michiganensis subsp. michiganensis NCPPB
382]
gi|169157270|emb|CAQ02455.1| ribonucleoside-diphosphate reductase beta subunit [Clavibacter
michiganensis subsp. sepedonicus]
Length = 331
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/116 (40%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLHL FGI++I + ENP L T+EF + + M+ +A +E Y + +P G +GL
Sbjct: 206 VRDESLHLKFGINLILTVLEENPDLQTEEFAAEIKQMILDAVEMEEQYNRDLLPNGILGL 265
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
NA QY++++A+RR ++G E +K + NP WM+ D + NFFE+ T Y
Sbjct: 266 NANYINQYVKYLADRRLEELGFEAEYKVS-NPAKWMATANDTLQLVNFFESTNTSY 320
>gi|312599293|gb|ADQ91316.1| hypothetical protein BpV2_149c [Bathycoccus sp. RCC1105 virus BpV2]
Length = 387
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 9/117 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H F +++ N +K K + ++ +A +E + + +P +G+N
Sbjct: 266 RDEGMHQEFAVELFNMLK-------NKPSGEIIEEIIRDAVTIEKEFITDALPCSLIGMN 318
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ +Y++++A+R Q+G + ++ T+NPF +M E I L + NFFE RV +Y +
Sbjct: 319 SSKMSEYIEYVADRLSKQVGHDKIWN-TKNPFDFM-ENISLDGKTNFFEKRVGDYGK 373
>gi|215401441|ref|YP_002332744.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
gi|209483982|gb|ACI47415.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
Length = 313
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH NF N + K M EA +E+ + E +P+ VG+N
Sbjct: 191 RDEGLHTNFACLYYNT------RVDQKLDVPTVSDMFAEAVAIEMEFFAEALPESLVGMN 244
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +Y++F+A+R Q+ ++ +TENPF +M+ I L+ + NFFE RV EY++
Sbjct: 245 AEMMRKYIEFVADRLLVQLKYPKIY-HTENPFEFMNN-ISLEGKTNFFEKRVGEYKRFGA 302
Query: 122 LKW 124
+
Sbjct: 303 GED 305
>gi|269864946|ref|XP_002651751.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|269865852|ref|XP_002652068.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|269866233|ref|XP_002652201.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220062966|gb|EED41855.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063214|gb|EED41988.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063944|gb|EED42305.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 226
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + I + ++ EA +E + E++P +G+N
Sbjct: 104 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 154
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G
Sbjct: 155 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 210
>gi|167760514|ref|ZP_02432641.1| hypothetical protein CLOSCI_02888 [Clostridium scindens ATCC 35704]
gi|167661880|gb|EDS06010.1| hypothetical protein CLOSCI_02888 [Clostridium scindens ATCC 35704]
Length = 347
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +++ ++K E P L+T+ ++ R M+ E EI++ H + GLN
Sbjct: 219 RDENTHLWLFRNILLELKKEEPQLFTESRIEEYREMIKEGCQQEISWGHYVIGDDIQGLN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+Q++ N RC +G P+++ + W+S+ + + +FFE R T Y
Sbjct: 279 RDMVTDYIQYLGNLRCTNLGFAPIYEGHVKEPDSMSWVSQFSNANMIKTDFFEARSTAYA 338
Query: 118 QGAELKWD 125
+ + L D
Sbjct: 339 KSSALVDD 346
>gi|257456224|ref|ZP_05621421.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
vincentii ATCC 35580]
gi|257446310|gb|EEV21356.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
vincentii ATCC 35580]
Length = 351
Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I++++ E P L+T E + R+M+ E EIA+ H + GL
Sbjct: 223 RDENTHLWLFRSIIHELQKEEPQLFTPENNELFRSMIREGCEQEIAWGHYVIGDDIPGLT 282
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+Q++ N RC +G EPL++ + E P W+S+ + + +FFE + T Y
Sbjct: 283 RGMVTDYIQYLGNLRCENLGFEPLYEGHREEPASMSWVSQYSNANLIKTDFFEAKSTAYA 342
Query: 118 QGAELKWD 125
+ + LK D
Sbjct: 343 KSSALKDD 350
>gi|269864629|ref|XP_002651641.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220064151|gb|EED42415.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 277
Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + I + ++ EA +E + E++P +G+N
Sbjct: 155 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 205
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G
Sbjct: 206 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 261
>gi|152989800|ref|YP_001355522.1| ribonucleotide-diphosphate reductase subunit beta [Nitratiruptor
sp. SB155-2]
gi|151421661|dbj|BAF69165.1| ribonucleoside-diphosphate reductase, beta subunit [Nitratiruptor
sp. SB155-2]
Length = 341
Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN +K E P L+TKE M A LE ++ +GL
Sbjct: 217 RDEVTHLLIFQNMINTVKKERPELFTKELIDDVYKMFEGAVDLETSWGKYITQGQILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
EQY++++A+ R ++GLEP++ E+P W+ + ++ NFFE VT Y +G+
Sbjct: 277 DEIIEQYIKYLADDRLKRVGLEPMYNV-EHPIKWVDDFSKFNDQKTNFFEGNVTNYSKGS 335
Query: 121 ELKWD 125
L +D
Sbjct: 336 -LDFD 339
>gi|149375674|ref|ZP_01893443.1| Ribonucleotide reductase, beta subunit [Marinobacter algicola
DG893]
gi|149360076|gb|EDM48531.1| Ribonucleotide reductase, beta subunit [Marinobacter algicola
DG893]
Length = 352
Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 3/124 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H +FG+ V+NQI E + R M E+ E AYA+ + +G
Sbjct: 232 LRDEAMHFSFGLKVVNQILEEEN---ITLDPKAVRDMWDESEAAETAYANYILRDPILGY 288
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A + +F+ANRR +GLE F +N PW+ E L+KEKNFFETRV EYQ GA
Sbjct: 289 SAQYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFFETRVIEYQTGA 348
Query: 121 ELKW 124
+L+W
Sbjct: 349 QLEW 352
>gi|313793687|gb|EFS41718.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL110PA1]
gi|327456018|gb|EGF02673.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL092PA1]
Length = 328
Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLHL FG+++I + ENP + T EF + M+ + +E Y + +P+G G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGIRGM 263
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
NA Y++++A+RR ++G EP + NP WM+ D + NFFE T Y
Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEY-RVANPAKWMATANDTLQVVNFFEATNTSY 318
>gi|319902178|ref|YP_004161906.1| ribonucleotide reductase [Bacteroides helcogenes P 36-108]
gi|319417209|gb|ADV44320.1| ribonucleotide reductase [Bacteroides helcogenes P 36-108]
Length = 347
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I ++K E P L+ + + M+ E EIA+ + GL+
Sbjct: 219 RDENTHLWLFRNIILELKKEEPELFVPDKVKVYEEMMREGVKQEIAWGQYVIGDNIQGLS 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
E Y+ ++ N R +G PL++ + W+S+ + + +FFE + T Y
Sbjct: 279 RKMLEDYIHYLGNLRWKSLGYAPLYEDNQTEPESMHWVSQYSNANMVKTDFFEAKSTAYA 338
Query: 118 QGAELKWD 125
+ L+ D
Sbjct: 339 KSTALEDD 346
>gi|210616053|ref|ZP_03290925.1| hypothetical protein CLONEX_03144 [Clostridium nexile DSM 1787]
gi|210149961|gb|EEA80970.1| hypothetical protein CLONEX_03144 [Clostridium nexile DSM 1787]
Length = 355
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +++ ++K E P L+T+++ + R+M+ E EI + H + GLN
Sbjct: 227 RDENTHLWLFRNILIELKKEQPDLFTEQYIDEYRSMIKEGCEQEIKWGHYVIGDDVQGLN 286
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+Q++ N RC +G P+++ E W+S+ + + +FFE R T Y
Sbjct: 287 REMITDYVQYLGNLRCTNLGFAPIYEGHETEPESMRWVSQYSNANAIKTDFFEARSTAYA 346
Query: 118 QGAELKWD 125
+ + L D
Sbjct: 347 KSSALVDD 354
>gi|162452149|ref|YP_001614516.1| ribonucleotide-diphosphate reductase [Sorangium cellulosum 'So ce
56']
gi|161162731|emb|CAN94036.1| Ribonucleotide-diphosphate reductase [Sorangium cellulosum 'So ce
56']
Length = 339
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES H+ F +V++ + E P L+ + M+ EA E +A + + G G++
Sbjct: 213 RDESAHMRFAFEVVSTARREEPELFDAGLARSILDMMDEAIACEARFAEDLLGAGVAGMS 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +Y++F A++R +G+ + +NPF +M + D+++ NFFE RV+ YQ G
Sbjct: 273 ARDVRRYLEFCADQRLATLGMPKRYG-AKNPFSFMD-LQDVQEVTNFFERRVSAYQVGVS 330
Query: 122 LK 123
+
Sbjct: 331 GE 332
>gi|269863618|ref|XP_002651286.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220064807|gb|EED42770.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 332
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + I + ++ EA +E + E++P +G+N
Sbjct: 219 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 269
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G
Sbjct: 270 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 325
>gi|320585888|gb|EFW98567.1| ribonucleotide reductase small subunit [Grosmannia clavigera
kw1407]
Length = 378
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 9/114 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + +K + +Q ++ +A +E + E +P +G+N
Sbjct: 256 RDEGLHTDFACLLFSHLK-------NRPSKQLIEEIIVDAVKIEQEFLTEALPCALLGMN 308
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 115
+ +QY++F+A+R +G + ++ + NPF +M E I L + NFFE RV E
Sbjct: 309 STLMKQYIEFVADRLLVALGNDKVYN-STNPFDFM-ENISLGGKTNFFEKRVPE 360
>gi|314918862|gb|EFS82693.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL050PA1]
gi|314921071|gb|EFS84902.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL050PA3]
Length = 328
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLHL FG+++I + ENP + T EF + M+ + +E Y + +P+G +G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
NA Y++++A+RR ++G EP + NP WM+ D + NFFE T Y
Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEY-RVANPAKWMATANDTLQVVNFFEATNTSY 318
>gi|289425969|ref|ZP_06427716.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes SK187]
gi|289153512|gb|EFD02226.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes SK187]
gi|313763766|gb|EFS35130.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL013PA1]
gi|313802998|gb|EFS44206.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL110PA2]
gi|313816916|gb|EFS54630.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL059PA1]
gi|313829718|gb|EFS67432.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL063PA2]
gi|313839374|gb|EFS77088.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL086PA1]
gi|314916474|gb|EFS80305.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL005PA4]
gi|314932316|gb|EFS96147.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL067PA1]
gi|314956590|gb|EFT00842.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL027PA1]
gi|314959472|gb|EFT03574.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL002PA1]
gi|314964864|gb|EFT08964.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL082PA1]
gi|314968630|gb|EFT12728.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL037PA1]
gi|315079174|gb|EFT51177.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL053PA2]
gi|315100241|gb|EFT72217.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL059PA2]
gi|315102565|gb|EFT74541.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL046PA1]
gi|315109517|gb|EFT81493.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL030PA2]
gi|327455890|gb|EGF02545.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL087PA3]
gi|327458042|gb|EGF04697.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL083PA2]
gi|328757204|gb|EGF70820.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL087PA1]
gi|328757585|gb|EGF71201.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL025PA2]
Length = 328
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLHL FG+++I + ENP + T EF + M+ + +E Y + +P+G +G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
NA Y++++A+RR ++G EP + NP WM+ D + NFFE T Y
Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEY-RVANPAKWMATANDTLQVVNFFEATNTSY 318
>gi|228861726|ref|YP_002854746.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
gi|226425174|gb|ACO53586.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
Length = 339
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH NF N+ E+ L + ++ M EA +E + +P +G+N
Sbjct: 215 RDEGLHTNFACLYYNEYIPEHDKLSS----ERILDMFIEAVEIEKEFFKTALPCSLLGMN 270
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S +Y++F+A+R + F NPF +M+ I ++ + NFFE RV EY++
Sbjct: 271 TESMCRYIEFVADRLLVDLNQPKHF-MASNPFNFMTN-ISMEGKTNFFERRVGEYRRFGA 328
Query: 122 LKW 124
+
Sbjct: 329 GQD 331
>gi|254449372|ref|ZP_05062814.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
proteobacterium HTCC5015]
gi|198261018|gb|EDY85321.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
proteobacterium HTCC5015]
Length = 404
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 50/124 (40%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
MRDE +H +FG+ V QI E + + R M E E YA + +G
Sbjct: 284 MRDEVMHASFGLRVARQIMREEN---IQPDPKAMREMWDECEAAEEGYARYLLRDPILGY 340
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A +FIANRR +++ LE F EN PW+ E +++KEKNFFETRVTEYQ G
Sbjct: 341 SAEDHVNQFRFIANRRANKLSLEEPFPGAENALPWLDEQANMRKEKNFFETRVTEYQVGG 400
Query: 121 ELKW 124
L W
Sbjct: 401 GLTW 404
>gi|300706309|ref|XP_002995432.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
gi|239604534|gb|EEQ81761.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
Length = 325
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 11/118 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++PH ++ EA +E + ++P +G+N
Sbjct: 202 RDEGLHCDFACLLNQYLINKSPH---------ILDIVKEAVEIEKEFLGVSLPVNLIGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
QY++F+A+R +GLE + T NPF +M E I L + NFF+ R ++YQ+
Sbjct: 253 CKLMCQYIEFVADRLLINLGLEKYYN-TLNPFDFM-ENISLVGKTNFFDKRESQYQKA 308
>gi|283768723|ref|ZP_06341634.1| ribonucleoside-diphosphate reductase, beta subunit [Bulleidia
extructa W1219]
gi|283104509|gb|EFC05882.1| ribonucleoside-diphosphate reductase, beta subunit [Bulleidia
extructa W1219]
Length = 348
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +++ +++ E P L+T Q + M+HE EIA+ + GLN
Sbjct: 220 RDENTHLWLFRNILLELQKEEPELFTDSNIQMIKDMIHEGVQQEIAWGQYVIGNNIPGLN 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
+ E Y++++ N R +GL L++ E W+ + D + +FFE RVT Y
Sbjct: 280 SQMVEDYIKYLGNTRFATLGLGNLYEGYEEEPETMRWVKQYSDANMVKTDFFEARVTAYA 339
Query: 118 QGAELKWD 125
+ + ++ D
Sbjct: 340 KSSAIEDD 347
>gi|290343623|ref|YP_003494990.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1]
gi|260161038|emb|CAY39739.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1]
Length = 389
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH F +++ ++ + ++ EA +E + + +P +G+N
Sbjct: 268 RDEGLHQEFAVELFKTLR-------NRPGVDTIHAIVREAVDIEKGFILDALPCNLIGMN 320
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +Y++++++R QIG+ ++ ++NPF +M E I L + NFFE RV +Y +
Sbjct: 321 SEKMSEYIEYVSDRLLKQIGVPTIWN-SKNPFDFM-ENISLDGKTNFFEKRVGDY---GK 375
Query: 122 LKWD 125
L D
Sbjct: 376 LDDD 379
>gi|163955147|ref|YP_001648251.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
gi|163638596|gb|ABY27955.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
Length = 322
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH F +++ ++ + ++ EA +E + + +P +G+N
Sbjct: 201 RDEGLHQEFAVELFKTLR-------NRPGVDTIHAIVREAVEIEKGFILDALPCNLIGMN 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ +Y++++++R QIG+ ++ ++NPF +M E I L + NFFE RV +Y +
Sbjct: 254 SEKMSEYIEYVSDRLLKQIGVPTIWN-SKNPFDFM-ENISLDGKTNFFEKRVGDY---GK 308
Query: 122 LKWD 125
L D
Sbjct: 309 LDDD 312
>gi|256825983|ref|YP_003149943.1| ribonucleotide reductase subunit beta [Kytococcus sedentarius DSM
20547]
gi|256689376|gb|ACV07178.1| ribonucleotide reductase, beta subunit [Kytococcus sedentarius DSM
20547]
Length = 365
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 72/126 (57%), Gaps = 4/126 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES+H+ F +V+ ++ E P L+ E + R ML EA E +A + + G GL+
Sbjct: 239 RDESMHMAFAFEVVETVRSEEPDLFDAEMAGQVRQMLMEAVDAEAQFAEDLLGMGVAGLS 298
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
Y++ +A+RR Q+G+ ++ T+NP +M E+ D+++ NFFE RV+ YQ G
Sbjct: 299 VADMRAYLENVADRRAVQLGMPEIYG-TKNPLAFM-ELQDVQELSNFFERRVSAYQVGVE 356
Query: 120 AELKWD 125
+ +D
Sbjct: 357 GSVSFD 362
>gi|227485717|ref|ZP_03916033.1| ribonucleoside-diphosphate reductase [Anaerococcus lactolyticus
ATCC 51172]
gi|227236272|gb|EEI86287.1| ribonucleoside-diphosphate reductase [Anaerococcus lactolyticus
ATCC 51172]
Length = 352
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +IN +K E P L+T E R ML E EI + + GL+
Sbjct: 224 RDENTHLWLFRSLINDLKKERPDLFTPEATIVYRDMLKEGVRQEIEWGKYAIGDNIAGLS 283
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117
E Y++++ N R +G +PLF+ W+ E D + + +FFE +VT Y
Sbjct: 284 TTMIEDYIKYLGNLRAKGLGFDPLFEGYTEIPQSMKWVDEYSDPNRVKTDFFEAKVTAYS 343
Query: 118 QGAELKWD 125
+ + ++ D
Sbjct: 344 KSSIIEDD 351
>gi|242309209|ref|ZP_04808364.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pullorum MIT 98-5489]
gi|239524250|gb|EEQ64116.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pullorum MIT 98-5489]
Length = 341
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN K E+P +TK+ +++ M EA +EIA+ +GL
Sbjct: 217 RDEVTHLLLFQNMINSTKKESPEFFTKDLEEEVLEMFREAVKVEIAWGEYITQGQILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGA 120
A ++Y++++A+ R ++GL L+ ++P W+ + + NFFE VT Y +G+
Sbjct: 277 AEIIQEYIKYLADDRLRRVGLPVLYN-AKHPIKWVDSFSSFNEQKTNFFEGNVTNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 INFDD 340
>gi|145596896|ref|YP_001161193.1| ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
gi|145306233|gb|ABP56815.1| Ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
Length = 350
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 77/126 (61%), Gaps = 4/126 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES+H+ F DV++ ++ E P L+ + +++ + M+ EA E+ +A + + +G GL+
Sbjct: 224 RDESMHMAFAFDVVDTVRAEEPDLFDADLERQVKEMVAEAVDCEVQFAEDLLEQGVSGLS 283
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
+Y+Q +A+RR +G+ P++ NPF +M E+ D+++ NFFE RV+ YQ G
Sbjct: 284 LADMREYLQHVADRRLVTLGIAPMYGSA-NPFAFM-ELQDVQELSNFFERRVSAYQMGVS 341
Query: 120 AELKWD 125
+ +D
Sbjct: 342 GSVTFD 347
>gi|269864962|ref|XP_002651756.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|269866721|ref|XP_002652369.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220062645|gb|EED41686.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063933|gb|EED42300.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 135
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + I + ++ EA +E + E++P +G+N
Sbjct: 13 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 63
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
QY++F+A+R +G + ++ + NPF +M E I L+ + NFFE R YQ+G
Sbjct: 64 CKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFFERREANYQKG 119
>gi|310823070|ref|YP_003955428.1| ribonucleoside-diphosphate reductase subunit beta [Stigmatella
aurantiaca DW4/3-1]
gi|309396142|gb|ADO73601.1| Ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
aurantiaca DW4/3-1]
Length = 336
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES H+ F + I + E P L+ Q M+ EA E +A + + G GL+
Sbjct: 206 RDESTHMAFAFEAIRVARQEEPDLFDARMQADVVAMMREAVECETLFAQDLLSGGVAGLS 265
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
QY++++A++R +GL P+F +N P+M + D+++ NFFE RV+ YQ
Sbjct: 266 VQEMRQYLEYVADQRLTMLGLAPVF-RVKNSLPFMD-LQDVQELTNFFERRVSAYQVA 321
>gi|50843560|ref|YP_056787.1| ribonucleotide-diphosphate reductase subunit beta
[Propionibacterium acnes KPA171202]
gi|282854887|ref|ZP_06264221.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes J139]
gi|289427904|ref|ZP_06429608.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes J165]
gi|295131638|ref|YP_003582301.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes SK137]
gi|50841162|gb|AAT83829.1| ribonucleoside-diphosphate reductase beta chain [Propionibacterium
acnes KPA171202]
gi|282582033|gb|EFB87416.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes J139]
gi|289158787|gb|EFD06987.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes J165]
gi|291376691|gb|ADE00546.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes SK137]
gi|313771782|gb|EFS37748.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL074PA1]
gi|313808408|gb|EFS46875.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL087PA2]
gi|313810605|gb|EFS48319.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL083PA1]
gi|313813765|gb|EFS51479.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL025PA1]
gi|313818171|gb|EFS55885.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL046PA2]
gi|313821029|gb|EFS58743.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL036PA1]
gi|313823899|gb|EFS61613.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL036PA2]
gi|313827161|gb|EFS64875.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL063PA1]
gi|313831646|gb|EFS69360.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL007PA1]
gi|313834800|gb|EFS72514.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL056PA1]
gi|314924366|gb|EFS88197.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL001PA1]
gi|314927054|gb|EFS90885.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL036PA3]
gi|314961874|gb|EFT05975.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL002PA2]
gi|314965892|gb|EFT09991.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL082PA2]
gi|314974996|gb|EFT19091.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL053PA1]
gi|314977908|gb|EFT22002.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL045PA1]
gi|314979603|gb|EFT23697.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL072PA2]
gi|314981613|gb|EFT25706.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL110PA3]
gi|314984684|gb|EFT28776.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL005PA1]
gi|314988338|gb|EFT32429.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL005PA2]
gi|314990428|gb|EFT34519.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL005PA3]
gi|315082361|gb|EFT54337.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL078PA1]
gi|315083809|gb|EFT55785.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL027PA2]
gi|315087306|gb|EFT59282.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL002PA3]
gi|315089724|gb|EFT61700.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL072PA1]
gi|315092253|gb|EFT64229.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL110PA4]
gi|315094826|gb|EFT66802.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL060PA1]
gi|315095599|gb|EFT67575.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL038PA1]
gi|315104692|gb|EFT76668.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL050PA2]
gi|315107754|gb|EFT79730.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL030PA1]
gi|327326613|gb|EGE68401.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL096PA3]
gi|327332877|gb|EGE74609.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL096PA2]
gi|327335278|gb|EGE76988.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL097PA1]
gi|327447704|gb|EGE94358.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL043PA2]
gi|327448579|gb|EGE95233.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL043PA1]
gi|327449568|gb|EGE96222.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL013PA2]
gi|328757395|gb|EGF71011.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL020PA1]
gi|328762002|gb|EGF75508.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL099PA1]
Length = 328
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLHL FG+++I + ENP + T EF + M+ + +E Y + +P+G +G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
NA Y++++A+RR ++G EP + NP WM+ D + NFFE T Y
Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEY-RVVNPAKWMATANDTLQVVNFFEATNTSY 318
>gi|327328671|gb|EGE70431.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL103PA1]
Length = 328
Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLHL FG+++I + ENP + T EF + M+ + +E Y + +P+G +G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGILGM 263
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
NA Y++++A+RR ++G EP + NP WM+ D + NFFE T Y
Sbjct: 264 NADYVNDYVKYLADRRLEELGFEPEY-RIVNPAKWMATANDTLQVVNFFEATNTSY 318
>gi|212697417|ref|ZP_03305545.1| hypothetical protein ANHYDRO_01987 [Anaerococcus hydrogenalis DSM
7454]
gi|325846383|ref|ZP_08169352.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
gi|212675609|gb|EEB35216.1| hypothetical protein ANHYDRO_01987 [Anaerococcus hydrogenalis DSM
7454]
gi|325481567|gb|EGC84607.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
Length = 352
Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +IN +K E P L+T E ++ ++L E EIA+ + GLN
Sbjct: 224 RDENTHLWLFRSMINDLKEERPDLFTDELKEFYLSLLKEGVEQEIAWGKYAIGDEIQGLN 283
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117
+ E Y++++ N R +GL +++ E W+SE D + + +FFE +V+ Y
Sbjct: 284 SQMIEDYIKYLGNLRAKGLGLGKIYEGYEEEPQSMKWVSEYSDPNQVKTDFFEGKVSAYS 343
Query: 118 QGAELKWD 125
+ + ++ D
Sbjct: 344 KSSVIEDD 351
>gi|153940168|ref|YP_001392091.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum F str. Langeland]
gi|170756361|ref|YP_001782419.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum B1 str. Okra]
gi|152936064|gb|ABS41562.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum F str. Langeland]
gi|169121573|gb|ACA45409.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum B1 str. Okra]
gi|322807123|emb|CBZ04697.1| ribonucleotide reductase of class Ia (aerobic),beta subunit
[Clostridium botulinum H04402 065]
Length = 342
Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++I ++K EN H++T+E +++ R M+ EI + +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRMGVEHEIQWGQYVTNNEILGLN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
E+Y+++++N R IGL+PL+ ++P W+ L + +FFE +VT Y +
Sbjct: 274 DELIEKYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333
Query: 120 AELKWD 125
A +D
Sbjct: 334 AAFDFD 339
>gi|168702494|ref|ZP_02734771.1| ribonucleoside-diphosphate reductase, beta subunit [Gemmata
obscuriglobus UQM 2246]
Length = 332
Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats.
Identities = 43/121 (35%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES H+ F VI+ ++ E P L+ E + + ML EA E A+A + + +G GL+
Sbjct: 206 RDESAHMAFAFRVIDTVRREEPDLFDAELEAQIVAMLREAVECETAFARDVLGQGVAGLS 265
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
Y++++A+RR +G+ P+F +NPF +M + D+++ NFFE RV+ YQ G
Sbjct: 266 LADLRSYLEYVADRRLESLGIAPVFG-AKNPFGFMD-LQDVQELTNFFERRVSAYQLGVT 323
Query: 122 L 122
Sbjct: 324 G 324
>gi|168179222|ref|ZP_02613886.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum NCTC 2916]
gi|182669722|gb|EDT81698.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum NCTC 2916]
Length = 342
Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++I ++K EN H++T+E +++ R M+ EI + +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRIGVEHEIQWGQYVTNNEILGLN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
E+Y+++++N R IGL+PL+ ++P W+ L + +FFE +VT Y +
Sbjct: 274 DELIERYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333
Query: 120 AELKWD 125
A +D
Sbjct: 334 AAFDFD 339
>gi|302867100|ref|YP_003835737.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
gi|315506490|ref|YP_004085377.1| ribonucleotide reductase [Micromonospora sp. L5]
gi|302569959|gb|ADL46161.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
gi|315413109|gb|ADU11226.1| ribonucleotide reductase [Micromonospora sp. L5]
Length = 342
Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 78/126 (61%), Gaps = 4/126 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES+H+ F DV+ ++ E P L+ E +++ + ML EA E+++A + + +G G++
Sbjct: 216 RDESMHMAFAFDVVETVRAEEPDLFDDEMERQVKEMLAEAVECEVSFAEDLLGQGVPGMS 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
+Y+Q +A+RR +G+ P++ + NPF +M E+ D+++ NFFE RV+ YQ G
Sbjct: 276 LADMREYLQHVADRRLAVLGIAPMYG-SGNPFAFM-ELQDVQELSNFFERRVSAYQVGVT 333
Query: 120 AELKWD 125
+ +D
Sbjct: 334 GSVTFD 339
>gi|311898297|dbj|BAJ30705.1| putative ribonucleoside-diphosphate reductase subunit beta
[Kitasatospora setae KM-6054]
Length = 339
Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 74/126 (58%), Gaps = 4/126 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES+H++F V++ ++ E P L+ + ++ ML EA E+ +A + +G G+N
Sbjct: 213 RDESMHMDFAFSVVDTVREEEPDLFDDKMARQVTEMLEEAVEAELQFARDLCGEGLPGMN 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG-- 119
S +Y+Q +A++R ++GL + + NPF +M E+ ++++ NFFE RV+ YQ
Sbjct: 273 TESMREYLQAVADQRLARLGLPIRYG-STNPFGFM-ELQNVQELTNFFERRVSAYQIAVE 330
Query: 120 AELKWD 125
+ +D
Sbjct: 331 GSVSFD 336
>gi|73974202|ref|XP_858105.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
inducible) isoform 4 [Canis familiaris]
Length = 374
Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQ---KSRTMLHEATLL-------------E 45
RDE LH +F + + + +E + + EA ++ +
Sbjct: 226 RDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQVSREAYMISTSLFLEIATCRSK 285
Query: 46 IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 105
+ E +P G +G+N +QY++F+A+R ++G +F ENPF +M E I L+ +
Sbjct: 286 HEFLTEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGK 343
Query: 106 KNFFETRVTEYQQGAEL 122
NFFE RV EYQ+ A +
Sbjct: 344 TNFFEKRVAEYQRFAVM 360
>gi|22788780|ref|NP_690492.1| Rr2 [Heliothis zea virus 1]
gi|22671540|gb|AAN04367.1|AF451898_72 Rr2 [Heliothis zea virus 1]
Length = 333
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F I + P + +K ++ +A +E + E++P +G+N
Sbjct: 205 RDEGLHCDFAILLFRNYLR--PEC--RSSDEKVINIVTDAVRIEQEFLTESLPVSMIGMN 260
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+Y++F+A+R +++ ++ +NPF +M+ I L+ + NFFE +V+EY++
Sbjct: 261 CKLMCEYIEFVADRLLYELIGRKIYN-AKNPFDFMTS-ISLEGKTNFFEKKVSEYKRYGV 318
Query: 122 L 122
Sbjct: 319 G 319
>gi|221633388|ref|YP_002522613.1| ribonucleotide-diphosphate reductase subunit beta [Thermomicrobium
roseum DSM 5159]
gi|221156578|gb|ACM05705.1| ribonucleoside-diphosphate reductase, beta subunit [Thermomicrobium
roseum DSM 5159]
Length = 328
Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
++DESLHL+FGI +I I E+P + + F ++ R ++ A LE AY +P+ +GL
Sbjct: 207 LKDESLHLSFGIHLITTILEEHPEIMSAAFGRQLRELILRAVELEEAYNRAVLPEPLIGL 266
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+A +Y+++IA+RR ++GL F NP WM +D+ + NFFE R Y+ G
Sbjct: 267 DADVLNRYVRYIADRRLEELGLPIAFG-EPNPLRWMVAQVDMPEIVNFFEARNIHYEVG 324
>gi|170761039|ref|YP_001788131.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum A3 str. Loch Maree]
gi|169408028|gb|ACA56439.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum A3 str. Loch Maree]
Length = 342
Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++I ++K EN H++T+E +++ R M+ EI + +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRMGVEHEIQWGQYVTNNEILGLN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
E+Y+++++N R IGL+PL+ ++P W+ L + +FFE +VT Y +
Sbjct: 274 DELIERYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDGFSKLNSTKTDFFEAKVTNYTKA 333
Query: 120 AELKWD 125
A +D
Sbjct: 334 AAFDFD 339
>gi|187932511|ref|YP_001884520.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
botulinum B str. Eklund 17B]
gi|187720664|gb|ACD21885.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum B str. Eklund 17B]
Length = 344
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I +++ ENP +T + + + R M+H EI + H + G+N
Sbjct: 218 RDENTHLWLFRNIIKELQSENPESFTADLKNELREMMHIGVENEILWGHYVIGDKIQGIN 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
E Y++++ N+R +IGLEPLF Y ENP W+ V + + +FFE + T Y +
Sbjct: 278 KKLIEDYIKYLGNKRLKEIGLEPLFSGYEENPATWVDVVANSNSVKTDFFEAKSTAYAKV 337
Query: 120 AELKWD 125
+ L D
Sbjct: 338 STLIDD 343
>gi|257067181|ref|YP_003153437.1| ribonucleotide-diphosphate reductase subunit beta [Anaerococcus
prevotii DSM 20548]
gi|256799061|gb|ACV29716.1| Ribonucleoside-diphosphate reductase [Anaerococcus prevotii DSM
20548]
Length = 352
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +IN +K E L+ E Q R ML E EIA+ ++ GLN
Sbjct: 224 RDENTHLWLFRSLINDLKKEREDLFVPELQNYYREMLKEGVEQEIAWGKYSIGNSIAGLN 283
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
E Y++++ N R +GLEPL++ + W+ E D + +FFE +VT Y
Sbjct: 284 EKMIEDYIKYLGNLRAKGLGLEPLYEGYKEIPESMKWVDEYSDPNGVKTDFFEAKVTAYS 343
Query: 118 QGAELKWD 125
+ + ++ D
Sbjct: 344 KSSIIEDD 351
>gi|320536436|ref|ZP_08036471.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
phagedenis F0421]
gi|320146705|gb|EFW38286.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
phagedenis F0421]
Length = 363
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I +++ E P L+T E + R M+ E EI + H + GLN
Sbjct: 235 RDENTHLWLFRSIIQELQKEEPQLFTPENIEMFRAMIKEGCEQEIKWGHYVIGDDIPGLN 294
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+Q++ N RC +G EPL++ + E P W+S+ + + +FFE + T Y
Sbjct: 295 KQMITDYIQYLGNLRCENLGFEPLYEGHREEPASMSWVSQYSNANLIKTDFFEAKSTAYA 354
Query: 118 QGAELKWD 125
+ + + D
Sbjct: 355 KSSAMVDD 362
>gi|150015087|ref|YP_001307341.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
beijerinckii NCIMB 8052]
gi|149901552|gb|ABR32385.1| Ribonucleoside-diphosphate reductase [Clostridium beijerinckii
NCIMB 8052]
Length = 344
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I +++ ENP L+T+E + + R M+ EI + H + G+N
Sbjct: 218 RDENTHLWLFRNIIKELQNENPELFTEEVKNELRNMMKIGVEQEILWGHYVIGDKIQGIN 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
E Y++++ N+R +I L PLF + +NP W+ + + + +FFE R T Y +
Sbjct: 278 KQLIENYIKYLGNKRLKEINLSPLFKEQDKNPASWVDTLSNANSVKTDFFEARSTAYAKV 337
Query: 120 AELKWD 125
L D
Sbjct: 338 TTLIDD 343
>gi|28493649|ref|NP_787810.1| ribonucleotide-diphosphate reductase subunit beta [Tropheryma
whipplei str. Twist]
gi|28572842|ref|NP_789622.1| ribonucleotide-diphosphate reductase subunit beta [Tropheryma
whipplei TW08/27]
gi|28410975|emb|CAD67360.1| ribonucleotide-diphosphate reductase small chain [Tropheryma
whipplei TW08/27]
gi|28476691|gb|AAO44779.1| ribonucleotide reductase beta chain [Tropheryma whipplei str.
Twist]
Length = 327
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/116 (39%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLHL FGI++I + ENP L T +F + R M+ +E Y H+ +P G +GL
Sbjct: 205 VRDESLHLKFGINLILTVLEENPDLQTSDFADEIRGMIIAGVEMEEEYNHDLLPNGILGL 264
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
N+ QY++++A+RR ++G +P + T NP WM+ D + NFFE T Y
Sbjct: 265 NSGYINQYVKYLADRRLEELGFDPEYNVT-NPAKWMATANDTFELVNFFEAINTSY 319
>gi|229827460|ref|ZP_04453529.1| hypothetical protein GCWU000182_02849 [Abiotrophia defectiva ATCC
49176]
gi|229788398|gb|EEP24512.1| hypothetical protein GCWU000182_02849 [Abiotrophia defectiva ATCC
49176]
Length = 354
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++I ++ ENP ++T E + + R M+ TL EI + +G+N
Sbjct: 226 RDEITHLVLFQNIIRELMKENPEIFTDELKGELREMVKVGTLNEIEWGQYVTNNEILGIN 285
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
E+Y+++++N R IGL F TENP W+ +L + +FFE +VT Y +
Sbjct: 286 NELIERYIKYLSNLRLRAIGLPVWFPEITENPMAWIESFSNLNATKTDFFEAKVTNYTKA 345
Query: 120 AELKWD 125
A +D
Sbjct: 346 AAFDFD 351
>gi|326792202|ref|YP_004310023.1| ribonucleotide reductase [Clostridium lentocellum DSM 5427]
gi|326542966|gb|ADZ84825.1| ribonucleotide reductase [Clostridium lentocellum DSM 5427]
Length = 342
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++I ++K ENP L+T+ ++ R M+ EIA+ +G+N
Sbjct: 214 RDEITHLVVFQNIIKELKKENPELFTESMIEEFREMMRVGVEHEIAWGQYVTANEIMGIN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
+ Y+++++N+R IGLE L+ T +P W+ L + +FFE +VT Y +
Sbjct: 274 DQLIDAYIKYLSNQRLKAIGLEELYPEITTHPMAWIDSFSKLNNTKTDFFEAKVTNYTKA 333
Query: 120 AELKWD 125
A +D
Sbjct: 334 AAFDFD 339
>gi|288800286|ref|ZP_06405744.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
oral taxon 299 str. F0039]
gi|288332499|gb|EFC70979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
oral taxon 299 str. F0039]
Length = 347
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I ++K E P L+T + M+ E EIA+ + GLN
Sbjct: 219 RDENTHLWLFRNIIQELKKEEPDLFTPDKVAVYEAMMREGVEQEIAWGQYVIGNDIQGLN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
A + Y++++ N R H +G + L+ P W+S+ + + +FFE + T Y
Sbjct: 279 AQMVDDYIRYLGNLRWHSLGFDYLYEDNRTEPENMRWVSQYSNANMVKTDFFEAKSTAYA 338
Query: 118 QGAELKWD 125
+ L+ D
Sbjct: 339 KSTALEDD 346
>gi|325475472|gb|EGC78653.1| ribonucleoside-diphosphate reductase [Treponema denticola F0402]
Length = 351
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I +++ E P L+T + + R M+ E EIA+ + + GLN
Sbjct: 223 RDENTHLWLFRSMIQELQKEEPQLFTPQNVELFRGMIREGCEQEIAWGNYVIGNDIPGLN 282
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117
+ Y+Q++ N RC +G P++ + W+S+ + + +FFE + T Y
Sbjct: 283 SQMITDYIQYLGNLRCENLGFAPIYDGHKEEPQSMSWVSQYSNANLIKTDFFEAKSTAYA 342
Query: 118 QGAELKWD 125
+ + + D
Sbjct: 343 KSSAMVDD 350
>gi|168184457|ref|ZP_02619121.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum Bf]
gi|237796249|ref|YP_002863801.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
botulinum Ba4 str. 657]
gi|182672468|gb|EDT84429.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum Bf]
gi|229263158|gb|ACQ54191.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum Ba4 str. 657]
Length = 342
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++I ++K EN H++T+E +++ R M+ EI + +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRIGVEHEIQWGQYVTNNEILGLN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
E+Y+++++N R IGL+PL+ + ++P W+ L + +FFE +VT Y +
Sbjct: 274 DELIERYIKYLSNLRLVAIGLKPLYLEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333
Query: 120 AELKWD 125
A +D
Sbjct: 334 AAFDFD 339
>gi|53713986|ref|YP_099978.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
fragilis YCH46]
gi|52216851|dbj|BAD49444.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
fragilis YCH46]
Length = 349
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I ++K E P L+T + + M+ E EIA+ + GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWGQYVIGDQIQGLN 280
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+ F+ N R +G PL++ W+S+ + + +FFE + T Y
Sbjct: 281 RQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340
Query: 118 QGAELKWD 125
+ L+ D
Sbjct: 341 KSTALEDD 348
>gi|253567022|ref|ZP_04844473.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
3_2_5]
gi|265764336|ref|ZP_06092904.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
2_1_16]
gi|15290503|gb|AAK92210.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
fragilis 638R]
gi|251944146|gb|EES84655.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
3_2_5]
gi|263256944|gb|EEZ28290.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
2_1_16]
gi|301163665|emb|CBW23219.1| putative ribonucleoside-diphosphate reductase beta chain
[Bacteroides fragilis 638R]
Length = 349
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I ++K E P L+T + + M+ E EIA+ + GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWGQYVIGDQIQGLN 280
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+ F+ N R +G PL++ W+S+ + + +FFE + T Y
Sbjct: 281 RQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340
Query: 118 QGAELKWD 125
+ L+ D
Sbjct: 341 KSTALEDD 348
>gi|148380773|ref|YP_001255314.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum A str. ATCC 3502]
gi|153932443|ref|YP_001385057.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum A str. ATCC 19397]
gi|153934989|ref|YP_001388527.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum A str. Hall]
gi|148290257|emb|CAL84376.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
botulinum A str. ATCC 3502]
gi|152928487|gb|ABS33987.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum A str. ATCC 19397]
gi|152930903|gb|ABS36402.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum A str. Hall]
Length = 342
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++I ++K EN H++T+E +++ R M+ EI + +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKNENLHIFTEELEEEFRQMMRMGVEHEIQWGQYVTNNEILGLN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
E+Y+++++N R IGL+PL+ ++P W+ L + +FFE +VT Y +
Sbjct: 274 DELIEKYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333
Query: 120 AELKWD 125
A +D
Sbjct: 334 AAFDFD 339
>gi|60682187|ref|YP_212331.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
fragilis NCTC 9343]
gi|60493621|emb|CAH08410.1| putative ribonucleoside-diphosphate reductase beta chain
[Bacteroides fragilis NCTC 9343]
Length = 349
Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I ++K E P L+T + + M+ E EIA+ + GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWGQYVIGDQIQGLN 280
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+ F+ N R +G PL++ W+S+ + + +FFE + T Y
Sbjct: 281 RQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340
Query: 118 QGAELKWD 125
+ L+ D
Sbjct: 341 KSTALEDD 348
>gi|108763495|ref|YP_633213.1| ribonucleoside-diphosphate reductase subunit beta [Myxococcus
xanthus DK 1622]
gi|108467375|gb|ABF92560.1| ribonucleoside-diphosphate reductase, beta subunit [Myxococcus
xanthus DK 1622]
Length = 349
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES H+ F + I + E P L+ + ++ ML EA E +A + + G +GL+
Sbjct: 219 RDESAHMAFAFESIQVARKEEPDLFDAQMERDVVAMLREAVECETQFAQDLLSGGVMGLS 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
Y++++A++R +G+ P+F T+NP +M + D+++ NFFE RV+ YQ
Sbjct: 279 VQDMRGYLEYVADQRLQMLGMTPVFG-TKNPLHFMD-LQDVQELTNFFERRVSSYQVA 334
>gi|271967540|ref|YP_003341736.1| ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
43021]
gi|270510715|gb|ACZ88993.1| Ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
43021]
Length = 331
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES+H+ F V++ ++ E P L+ + + M+ EA E+A+A + G G+N
Sbjct: 205 RDESMHMEFAFSVVDTVRAEEPDLFDDKLGAQVTQMIEEAVEAELAFAADLCGDGMSGMN 264
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY++++A++R ++ + NPF +M E+ D+++ NFFE RV+ YQ E
Sbjct: 265 VEQMRQYLEYVADQRLVRLRFPVRYGTA-NPFAFM-ELQDVQELANFFERRVSAYQVAVE 322
Query: 122 LK 123
Sbjct: 323 GN 324
>gi|256545921|ref|ZP_05473276.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
vaginalis ATCC 51170]
gi|256398343|gb|EEU11965.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
vaginalis ATCC 51170]
Length = 352
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +IN +K E P L+T E ++ ++L E EIA+ + GLN
Sbjct: 224 RDENTHLWLFRSMINDLKEERPDLFTDELKEFYLSLLKEGVEQEIAWGKYAIGDEIQGLN 283
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117
+ E Y++++ N R +GL +++ E+ W+SE D + + +FFE +V+ Y
Sbjct: 284 SQMIEDYIKYLGNLRAKGLGLGTIYEGYEDEPQSMKWVSEYSDPNQVKTDFFEGKVSAYS 343
Query: 118 QGAELKWD 125
+ + ++ D
Sbjct: 344 KSSVIEDD 351
>gi|225386408|ref|ZP_03756172.1| hypothetical protein CLOSTASPAR_00155 [Clostridium asparagiforme
DSM 15981]
gi|225047489|gb|EEG57735.1| hypothetical protein CLOSTASPAR_00155 [Clostridium asparagiforme
DSM 15981]
Length = 347
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I ++K E P L++ E + + M+ E EIA+ H + GL
Sbjct: 219 RDENTHLWLLRNMILELKKEEPQLFSPETVEMLKAMVEEGVEQEIAWGHYVIGDRISGLT 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
+Y++++ N R +G EPL++ E W+ + + + +FFE + T Y
Sbjct: 279 REMVTEYIRYLGNLRWTSLGFEPLYEGYEEEPESMKWVGQYSNANMVKTDFFEAKSTAYA 338
Query: 118 QGAELKWD 125
+ L D
Sbjct: 339 KSTALVDD 346
>gi|47213103|emb|CAF89523.1| unnamed protein product [Tetraodon nigroviridis]
Length = 407
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K Q ++ A +E + E +P +G+N
Sbjct: 295 RDEGLHCDFACLMFK-------HLLHKPSAQTVGAIIRNAVEIEQEFLTEALPVKLIGMN 347
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
++Y++F ++ ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 348 CQLMKRYIEF-------------IY-RAENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 392
Query: 122 L 122
+
Sbjct: 393 M 393
>gi|281204152|gb|EFA78348.1| ribonucleotide reductase-related protein [Polysphondylium pallidum
PN500]
Length = 323
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH F + +++ K + +++ +A E + +++P +G+N
Sbjct: 199 RDEGLHCQFACLLYSKLV-------NKLDAKTIESIIRDAVDCEKEFITQSLPVDLIGMN 251
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+Y++F+A+ +G + ++ NPF WM E+I + NFFE R T Y
Sbjct: 252 NRLMSEYIEFVADHLIVALGYKKIYNTA-NPFDWM-ELISIDTRTNFFEHRNTSYTIPGV 309
>gi|27375117|ref|NP_766646.1| ribonucleotide-diphosphate reductase subunit beta [Bradyrhizobium
japonicum USDA 110]
gi|27348253|dbj|BAC45271.1| ribonucleoside-diphosphate reductase beta subunit [Bradyrhizobium
japonicum USDA 110]
Length = 360
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 14/138 (10%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDESLH I + ++ E T+ + + LE + G
Sbjct: 212 VRDESLHCEGIIKLFHEWHRETG-AVTRPVRDDIVDVAKTMVKLEENFVELAFGLGKIEG 270
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----------NPFPWMSEVIDLKKEKNF 108
+ Y++++A+ R Q+ + P+F + E +P PW+ E+++ + NF
Sbjct: 271 MLPEHIHAYVRYVADWRLAQLRIAPVFGFFEAKEGGFTQLKAHPLPWLVEILNGVEHANF 330
Query: 109 FETRVTEYQQGAE-LKWD 125
FE R TEY + A WD
Sbjct: 331 FEQRATEYSKAASRGSWD 348
>gi|237678830|emb|CAQ57557.1| NrdB protein [Bradyrhizobium elkanii]
Length = 360
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 14/138 (10%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDESLH I + ++ E T+ + + LE + G
Sbjct: 212 VRDESLHCEGIIKLFHEWNRETG-AVTRSVRDDIVDVAKTMVKLEENFVDLAFGLGKIEG 270
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----------NPFPWMSEVIDLKKEKNF 108
+ Y++++A+ R Q+ + P+F + E +P PW+ E+++ + NF
Sbjct: 271 MRPEQIHTYVRYVADWRLTQLRIAPVFGFFEAKEGGFTQLKAHPLPWLVEILNGVEHANF 330
Query: 109 FETRVTEYQQGAE-LKWD 125
FE R TEY + A WD
Sbjct: 331 FEQRATEYSKAASRGSWD 348
>gi|331083185|ref|ZP_08332301.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
bacterium 6_1_63FAA]
gi|330404574|gb|EGG84114.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
bacterium 6_1_63FAA]
Length = 347
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I Q+K E P L+TKE Q + ML E EIA+ H + G++
Sbjct: 219 RDENTHLWLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAWGHYVLGDDIPGIS 278
Query: 62 APSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
+Y++++ N R +G + P ++ W+S + + +FFE + T Y
Sbjct: 279 KEMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVKTDFFEAKSTAYA 338
Query: 118 QGAELKWD 125
+ L D
Sbjct: 339 KSTALLDD 346
>gi|9634266|ref|NP_037805.1| ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
exigua MNPV]
gi|6960505|gb|AAF33575.1|AF169823_45 ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
exigua MNPV]
Length = 313
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH NF N + K M EA +E+ + E +P+ VG+N
Sbjct: 191 RDEGLHTNFACLYYNT------RVDQKLDAPTVNDMFSEAVAIEMEFFAEALPESLVGMN 244
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +Y++F+A+R Q+ ++ YTENPF +M+ I L+ + NFFE RV EY++
Sbjct: 245 ANMMRKYIEFVADRLLVQLKYPKMY-YTENPFEFMNN-ISLEGKTNFFEKRVGEYKRFGA 302
Query: 122 LKW 124
+
Sbjct: 303 GED 305
>gi|282879357|ref|ZP_06288101.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
buccalis ATCC 35310]
gi|282881358|ref|ZP_06290037.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
timonensis CRIS 5C-B1]
gi|281298554|gb|EFA90979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
buccalis ATCC 35310]
gi|281304764|gb|EFA96845.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
timonensis CRIS 5C-B1]
Length = 347
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I ++K E P ++T E + M+ E EIA+ + GLN
Sbjct: 219 RDENTHLWLFRNIIKELKKEEPEMFTPEKVKVYEEMMREGVRQEIAWGQYVIGNDIQGLN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENP---FPWMSEVIDLKK-EKNFFETRVTEYQ 117
A Y+ ++ N R H +G + L++ + W+++ D + +FFE + T Y
Sbjct: 279 AQMVTDYIHYLGNLRWHSLGFDYLYEDNQKEPEDMKWVAQYSDPNMVKTDFFEAKSTAYA 338
Query: 118 QGAELKWD 125
+ ++ D
Sbjct: 339 KSTAIEDD 346
>gi|260589755|ref|ZP_05855668.1| ribonucleoside-diphosphate reductase, beta subunit [Blautia
hansenii DSM 20583]
gi|260539995|gb|EEX20564.1| ribonucleoside-diphosphate reductase, beta subunit [Blautia
hansenii DSM 20583]
Length = 359
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I Q+K E P L+TKE Q + ML E EIA+ H + G++
Sbjct: 231 RDENTHLWLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAWGHYVLGDDIPGIS 290
Query: 62 APSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
+Y++++ N R +G + P ++ W+S + + +FFE + T Y
Sbjct: 291 KEMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVKTDFFEAKSTAYA 350
Query: 118 QGAELKWD 125
+ L D
Sbjct: 351 KSTALLDD 358
>gi|255008714|ref|ZP_05280840.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
fragilis 3_1_12]
gi|313146449|ref|ZP_07808642.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
fragilis 3_1_12]
gi|313135216|gb|EFR52576.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
fragilis 3_1_12]
Length = 349
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I ++K E P L+T + + M+ E EI + + GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPELFTSDRVKVYEAMMREGVKQEIEWGQYVIGDEIQGLN 280
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
E Y+ ++ N R +G PL++ W+S+ + + +FFE + T Y
Sbjct: 281 KKMIEDYIHYLGNLRWTSLGFTPLYEDNLKEPESMRWVSQYSNANMVKTDFFEAKSTAYA 340
Query: 118 QGAELKWD 125
+ L+ D
Sbjct: 341 KSTALEDD 348
>gi|265756566|ref|ZP_06090772.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
3_1_33FAA]
gi|263233754|gb|EEZ19369.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
3_1_33FAA]
Length = 349
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I ++K E P L+T + + M+ E EI + + GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWGQYVIGDNIQGLN 280
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
E Y+Q++ N R +G PL++ W+S+ + + +FFE + T Y
Sbjct: 281 WKMIEDYIQYLGNLRWSSLGFGPLYEENHKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340
Query: 118 QGAELKWD 125
+ L+ D
Sbjct: 341 KSTALEDD 348
>gi|90592764|ref|YP_529717.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
gi|71559214|gb|AAZ38213.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
Length = 313
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F N + K +M EA +E + +P +G+N
Sbjct: 191 RDEGLHTDFACLYYNT------RVHDKLAPDTVLSMFKEAVAIEKEFFTAALPAALLGMN 244
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A S Y++F+A+R Q+ F + NPF +M+ I L+ + NFFE RV EY++
Sbjct: 245 AQSMCDYIEFVADRLLVQLHQPKHF-HARNPFEFMNN-ISLEGKTNFFEKRVGEYKRFGA 302
Query: 122 LKW 124
Sbjct: 303 GDD 305
>gi|118474076|ref|YP_891239.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
fetus subsp. fetus 82-40]
gi|118413302|gb|ABK81722.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
fetus subsp. fetus 82-40]
Length = 340
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E P L+T E + K M +A LEI + +G
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFTSEVEAKIYEMFKKAGDLEIEWGKYITGNQIMGFT 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
E+Y+ ++ + R IGL+ L+ ++P W+ + ++ NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDDRLTSIGLKKLYN-AKHPIKWVDDFAKFNDQKSNFFESKVTNYSKGS 334
Query: 121 ELKWD 125
D
Sbjct: 335 LTFDD 339
>gi|160881347|ref|YP_001560315.1| ribonucleoside-diphosphate reductase [Clostridium phytofermentans
ISDg]
gi|160430013|gb|ABX43576.1| Ribonucleoside-diphosphate reductase [Clostridium phytofermentans
ISDg]
Length = 342
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL +++ ++++E ++TK +++ R M+ EIA+ +G+N
Sbjct: 214 RDEITHLVLFQNIMKELRVEQKEMFTKGLEEELREMMRTGVEHEIAWGQYVTDNQILGIN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
+QY+++++N+R +GLE L+ T++P W+ ++ + +FFE +VT Y +
Sbjct: 274 NELIDQYIKYLSNQRLRAVGLEILYPEITKHPMEWIESFSNINSTKTDFFEAKVTNYTKA 333
Query: 120 AELKWD 125
A +D
Sbjct: 334 AVFDFD 339
>gi|239628850|ref|ZP_04671881.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239518996|gb|EEQ58862.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 347
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I ++K E P L+T + + ML E EI + + GL
Sbjct: 219 RDENTHLWLFRSMIGELKKEEPGLFTPDNVKMLEDMLREGVSQEIEWGCYVIGDEVPGLT 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N R +G EPL++ W+++ + + +FFE + T Y
Sbjct: 279 KDMVSSYIKYLGNLRWTGLGFEPLYEGYGKEPESMAWVNQYSNANMVKTDFFEAKSTAYA 338
Query: 118 QGAELKWD 125
+ A + D
Sbjct: 339 KSAAIIDD 346
>gi|83592781|ref|YP_426533.1| ribonucleotide-diphosphate reductase subunit beta [Rhodospirillum
rubrum ATCC 11170]
gi|83575695|gb|ABC22246.1| Ribonucleoside-diphosphate reductase [Rhodospirillum rubrum ATCC
11170]
Length = 358
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 14/138 (10%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVG 59
+RDESLH I + ++ E L TK + + LE + G
Sbjct: 206 VRDESLHCQGIIRLFHEWNRETGAL-TKPVRDDILDVATTMVGLEEKFVDLAFELGAIEG 264
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKY-----------TENPFPWMSEVIDLKKEKNF 108
+ A + Y++++A+ R Q+ L L+ + +P PW+ E+++ + NF
Sbjct: 265 MRAEDIKSYVRYVADWRLTQLKLPILYGHFRETEAGYEQLRPHPLPWLVEILNGVEHANF 324
Query: 109 FETRVTEYQQGA-ELKWD 125
FE R TEY + A + WD
Sbjct: 325 FEQRSTEYSKAATQGAWD 342
>gi|325478871|gb|EGC81981.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
prevotii ACS-065-V-Col13]
Length = 352
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +IN ++ E L+TKE ++ R ML E EIA+ + GL+
Sbjct: 224 RDENTHLWLFRSLINDLRKEREDLFTKEHKEYYRNMLKEGVEQEIAWGKYAIGDNIAGLS 283
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
E Y++++ N R +GLE L++ + W+ E D + +FFE +VT Y
Sbjct: 284 EKMIEDYIKYLGNLRAKGLGLEALYEGYTEIPDSMKWVDEYSDPNAVKTDFFEAKVTAYS 343
Query: 118 QGAELKWD 125
+ + ++ D
Sbjct: 344 KSSIIEDD 351
>gi|126664354|ref|ZP_01735338.1| Ribonucleotide reductase, beta subunit [Marinobacter sp. ELB17]
gi|126630680|gb|EBA01294.1| Ribonucleotide reductase, beta subunit [Marinobacter sp. ELB17]
Length = 352
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H +FG+ V+NQI E + R M E+ E YA+ + +G
Sbjct: 232 LRDEAMHFSFGLKVVNQILEEEN---ISFDPKAVRDMWDESEAAESDYANYILRDPILGY 288
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
+A + +F+ANRR + L F +N PW+ E ++KEKNFFETRV EYQ GA
Sbjct: 289 SAEYHIEQFRFVANRRARTVNLPEPFPGAKNVSPWLEEQATMRKEKNFFETRVIEYQTGA 348
Query: 121 ELKW 124
+L+W
Sbjct: 349 QLEW 352
>gi|288817346|ref|YP_003431693.1| ribonucleotide reductase beta subunit [Hydrogenobacter thermophilus
TK-6]
gi|288786745|dbj|BAI68492.1| ribonucleotide reductase beta subunit [Hydrogenobacter thermophilus
TK-6]
gi|308750953|gb|ADO44436.1| ribonucleotide reductase [Hydrogenobacter thermophilus TK-6]
Length = 342
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ ++I IK ENP L+T E ++ AT EI + +G+N
Sbjct: 218 RDELTHVTLFRNIIQTIKQENPELFTPELEKWVYEFFKYATDAEIKWGQYVTQNQILGIN 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
++Y++++AN R Q+G +PL+ TENP W+ + + + +FF+ + Y +
Sbjct: 278 NTLIDRYIKYLANLRLTQLGYKPLYPEITENPMKWIDQFRTINDTKTDFFQAKPQTYAKR 337
Query: 120 AELKW 124
+ELKW
Sbjct: 338 SELKW 342
>gi|19074323|ref|NP_585829.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
cuniculi GB-M1]
gi|51701822|sp|Q8SRR2|RIR2_ENCCU RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|19068965|emb|CAD25433.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
cuniculi GB-M1]
Length = 325
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 11/118 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH F + +K + + + ++ +A +E + E++P +G+N
Sbjct: 202 RDEGLHCEFACLLHYHLKKK---------CNRIKEVVMDAVEIEKKFLSESLPVNLIGMN 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+Y++F+A+R +G E ++ NPF +M E I L + NFF+ R ++YQ+
Sbjct: 253 CNLMCRYIEFVADRLLENLGEERVYN-ATNPFDFM-ENISLVGKTNFFDKRESQYQKA 308
>gi|313768143|ref|YP_004061574.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
gi|312599750|gb|ADQ91771.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
Length = 387
Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H F +++ N +K K Q ++ +A +E + + +P +G+N
Sbjct: 266 RDEGMHQEFAVELFNMLK-------NKPSQNTIEEIIRDAVSIEKEFITDALPCSLIGMN 318
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ +Y++++A+R Q+G ++ T+NPF +M E I L + NFFE RV +Y +
Sbjct: 319 SGKMSEYIEYVADRLSKQVGHNKIWN-TKNPFDFM-ENISLDGKTNFFEKRVGDYGK 373
>gi|150005609|ref|YP_001300353.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
vulgatus ATCC 8482]
gi|254884474|ref|ZP_05257184.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
4_3_47FAA]
gi|294778581|ref|ZP_06744003.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides
vulgatus PC510]
gi|319640834|ref|ZP_07995547.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
3_1_40A]
gi|149934033|gb|ABR40731.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
vulgatus ATCC 8482]
gi|254837267|gb|EET17576.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
4_3_47FAA]
gi|294447530|gb|EFG16108.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides
vulgatus PC510]
gi|317387646|gb|EFV68512.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
3_1_40A]
Length = 349
Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I ++K E P L+T + + M+ E EI + + GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWGQYVIGDNIQGLN 280
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
E Y+Q++ N R +G PL++ W+S+ + + +FFE + T Y
Sbjct: 281 RKMIEDYIQYLGNLRWSSLGFGPLYEENHKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340
Query: 118 QGAELKWD 125
+ L+ D
Sbjct: 341 KSTALEDD 348
>gi|57168357|ref|ZP_00367491.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
coli RM2228]
gi|305432773|ref|ZP_07401932.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
coli JV20]
gi|57020165|gb|EAL56839.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
coli RM2228]
gi|304444170|gb|EFM36824.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
coli JV20]
Length = 340
Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E P L+ + K M +A LEI + +G
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNENNINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
E+Y+ ++ ++R I L+ ++ ++P W+ + ++ NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLVAINLDKIYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334
Query: 121 ELKWD 125
D
Sbjct: 335 ISFDD 339
>gi|323343338|ref|ZP_08083565.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
oralis ATCC 33269]
gi|323095157|gb|EFZ37731.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
oralis ATCC 33269]
Length = 349
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +++ ++K E P ++T E + M+ E EIA+ + GLN
Sbjct: 221 RDENTHLWLFRNILQELKKEEPKMFTPEKVKVYEEMMREGVRQEIAWGQYVIGDEVPGLN 280
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+ ++ N R H +G L+ W+S+ + + +FFE + T Y
Sbjct: 281 TKMVSDYIHYLGNLRWHSLGFGYLYDENIQEPENMKWVSQYSNANMVKTDFFEAKSTAYA 340
Query: 118 QGAELKWD 125
+ L+ D
Sbjct: 341 KSTALEDD 348
>gi|322378346|ref|ZP_08052803.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
suis HS1]
gi|322379688|ref|ZP_08054002.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
suis HS5]
gi|321147887|gb|EFX42473.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
suis HS5]
gi|321149232|gb|EFX43675.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
suis HS1]
Length = 342
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL+ ++IN ++ E L++ E + M +A LE A+ + L+
Sbjct: 218 RDELTHLHLFQNMINTLRKERSDLFSPELIAEVNEMFKQAVDLESAWGAYITQGEMLDLS 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
Y +++A+ R +GL L+ ++NP W+ + + NFFE +V+ Y +G+
Sbjct: 278 PQILRTYTEYLADTRLAVVGLPKLYN-SQNPIKWVDQFANFNSHRSNFFEAKVSNYSKGS 336
>gi|320527966|ref|ZP_08029132.1| ribonucleoside-diphosphate reductase, beta subunit [Solobacterium
moorei F0204]
gi|320131592|gb|EFW24156.1| ribonucleoside-diphosphate reductase, beta subunit [Solobacterium
moorei F0204]
Length = 349
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES HL +++ +++ E P L+T E Q R M++ EIA+ H + GLN
Sbjct: 221 RDESTHLWLFRNILVELQKEEPELFTPENIQMIREMMNTGVEQEIAWGHYVIGDEIPGLN 280
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N R +G L+ +Y E P W+ + D + +FFE R + Y
Sbjct: 281 KQMVTDYIKYLGNTRFATLGFGNLYEEYAEEPESMKWVKQYSDANMVKTDFFEARPSAYA 340
Query: 118 QGAELKWD 125
+ ++ D
Sbjct: 341 KSGAIEDD 348
>gi|291303011|ref|YP_003514289.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
DSM 44728]
gi|290572231|gb|ADD45196.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
DSM 44728]
Length = 338
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES H+NF V++ ++ E P L+ E + M+ EA E+ +A + +G G+
Sbjct: 212 RDESCHMNFAFSVVDVVRNEEPELFDDELTEAVTRMIEEAVAAELQFARDLCGEGMPGMT 271
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++++A++R ++G+ + ++NPF +M + D+++ NFFE R T YQ
Sbjct: 272 VNDMKSYLEYVADQRLTRLGMPVRYG-SKNPFGFM-ALQDVQELTNFFERRPTAYQVAVG 329
Query: 122 LKWD 125
D
Sbjct: 330 GTVD 333
>gi|317472120|ref|ZP_07931452.1| ribonucleotide reductase [Anaerostipes sp. 3_2_56FAA]
gi|316900524|gb|EFV22506.1| ribonucleotide reductase [Anaerostipes sp. 3_2_56FAA]
Length = 347
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +++ ++K E P L+ + R M+ + EI + H + GL
Sbjct: 219 RDENTHLWLFKNILLELKKEEPSLFHPDCINDYRRMIKKGCEQEIRWGHYVIGDEIQGLK 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
E+Y++++ N RC +G EP++ +E W+S+ + + +FFE + T Y
Sbjct: 279 KEMVEEYIRYLGNLRCQNLGFEPIYPGSETEPESMSWVSQFSNANMIKTDFFEAKSTAYA 338
Query: 118 QGAELKWD 125
+ + L D
Sbjct: 339 KSSALVDD 346
>gi|212693366|ref|ZP_03301494.1| hypothetical protein BACDOR_02879 [Bacteroides dorei DSM 17855]
gi|237710423|ref|ZP_04540904.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
9_1_42FAA]
gi|237726931|ref|ZP_04557412.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
D4]
gi|212664010|gb|EEB24584.1| hypothetical protein BACDOR_02879 [Bacteroides dorei DSM 17855]
gi|229433787|gb|EEO43864.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
dorei 5_1_36/D4]
gi|229455145|gb|EEO60866.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
9_1_42FAA]
Length = 349
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I ++K E P L+T + + M+ E EI + + GLN
Sbjct: 221 RDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWGQYVIGDNIQGLN 280
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
E Y+Q++ N R +G PL++ W+S+ + + +FFE + T Y
Sbjct: 281 RKMIEDYIQYLGNLRWSSLGFGPLYEENHKEPESMHWVSQYSNANMVKTDFFEAKSTAYA 340
Query: 118 QGAELKWD 125
+ L+ D
Sbjct: 341 KSTALEDD 348
>gi|291165654|gb|EFE27703.1| ribonucleoside-diphosphate reductase, beta subunit [Filifactor
alocis ATCC 35896]
Length = 348
Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I ++K E P L+T E + R M+ + EI +A+ + GL
Sbjct: 220 RDENSHLWLFRSIILELKKEEPELFTPENIEVFRNMIRQGVEEEIKWANYVIGDHIKGLT 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
E Y++++ N RC +G EP+++ W+SE D + +FFE +V+ Y
Sbjct: 280 MQMVEDYLKYLGNLRCRGLGFEPIYEGYQREPESMSWVSEYSDPNAIKTDFFEGKVSAYA 339
Query: 118 QGAELKWD 125
+ + ++ D
Sbjct: 340 KSSVIEDD 347
>gi|160937686|ref|ZP_02085046.1| hypothetical protein CLOBOL_02576 [Clostridium bolteae ATCC
BAA-613]
gi|158439331|gb|EDP17083.1| hypothetical protein CLOBOL_02576 [Clostridium bolteae ATCC
BAA-613]
Length = 347
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I +++ E P L+T + R+ML E EI + + GL
Sbjct: 219 RDENTHLWLFRSMIAELRKEEPQLFTPKMVDMLRSMLEEGVAQEIQWGCYVIGDDVPGLT 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N R +G L++ Y E P W+++ + + +FFE + T Y
Sbjct: 279 REMVTDYIRYLGNLRWSGLGFGTLYEGYDEEPQSMKWVNQYSNANMVKTDFFEAKSTAYA 338
Query: 118 QGAELKWD 125
+ A + D
Sbjct: 339 KSAAIVDD 346
>gi|118197598|ref|YP_874310.1| ribonucleotide reductase small subunit [Ecotropis obliqua NPV]
gi|113472593|gb|ABI35800.1| ribonucleotide reductase small subunit [Ecotropis obliqua NPV]
Length = 341
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F N N L Q+ +M EA +E + +P +G+N
Sbjct: 217 RDEGLHTDFACMYYNNYIPINEKL----SPQQILSMFIEAVDIEKEFFTTALPCYLLGIN 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A +Y++F+A+R ++ F T NPF +M+ I L+ + NFFE RV EY++
Sbjct: 273 ATEMCKYIEFVADRLLVELRQPKHFN-TPNPFNFMTN-ISLEGKTNFFERRVGEYKRFGA 330
Query: 122 LKW 124
+
Sbjct: 331 GQD 333
>gi|258648774|ref|ZP_05736243.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
tannerae ATCC 51259]
gi|260851104|gb|EEX70973.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
tannerae ATCC 51259]
Length = 350
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++ ++K E P ++T + R M+ + EI + + GL
Sbjct: 222 RDENTHLWLFRSILLELKKEAPEMFTPDKVDVYRQMIAQGVEEEIKWGEYVLGDKIEGLT 281
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
+ Y++++ N R +G +PL+ Y + P W+S+ + + +FFE R T Y
Sbjct: 282 SEMIRDYIKYLGNLRTTSLGFDPLYDGYDKEPPSMSWVSQYSNANMIKTDFFEARSTAYA 341
Query: 118 QGAELKWD 125
+ + L D
Sbjct: 342 KSSALIDD 349
>gi|57505748|ref|ZP_00371674.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
upsaliensis RM3195]
gi|57016021|gb|EAL52809.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
upsaliensis RM3195]
Length = 340
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E P L+ ++ K +M A LEI + +G
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNEQNIDKIYSMFKRAGELEIKWGKYITQNQIMGFT 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
E+Y+ ++ ++R I L+ ++ ++P W+ + ++ NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLIAINLDKIYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334
Query: 121 ELKWD 125
D
Sbjct: 335 ISFDD 339
>gi|303237757|ref|ZP_07324316.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
disiens FB035-09AN]
gi|302482043|gb|EFL45079.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
disiens FB035-09AN]
Length = 349
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I ++K E P L+T E M+ E EIA+ + GL
Sbjct: 221 RDENTHLWLFRNIIVELKQEQPELFTPERIAVYEEMMREGVRQEIAWGQYVIGDKVQGLT 280
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENP---FPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+ ++ N R +G L+++ +N W+++ + K + +FFE + T Y
Sbjct: 281 QQMVADYIHYLGNLRWRSLGFGNLYEHNQNEPDDMQWVAQYSNANKVKTDFFEAKSTAYA 340
Query: 118 QGAELKWD 125
+ L D
Sbjct: 341 KSTALIDD 348
>gi|328950373|ref|YP_004367708.1| Ribonucleoside-diphosphate reductase [Marinithermus hydrothermalis
DSM 14884]
gi|328450697|gb|AEB11598.1| Ribonucleoside-diphosphate reductase [Marinithermus hydrothermalis
DSM 14884]
Length = 332
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
++DESLHL+FG+ +I E + T ++ R ++ EA LE AY +P+ +GL
Sbjct: 211 LKDESLHLSFGLHLITGFLEEYSEVMTPRLAREVRGLILEAVQLERAYNQALLPRPILGL 270
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+A + Y++++A+RR ++GLE F T NP WM+ +D+ + NFFE T Y+ G
Sbjct: 271 SAETLNAYVEYVADRRLEELGLEAAFG-TPNPAKWMATEVDVPEIVNFFEAVNTSYEVG 328
>gi|227501022|ref|ZP_03931071.1| ribonucleoside-diphosphate reductase [Anaerococcus tetradius ATCC
35098]
gi|227216795|gb|EEI82193.1| ribonucleoside-diphosphate reductase [Anaerococcus tetradius ATCC
35098]
Length = 352
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +IN +K E L+ E Q R ML E EIA+ + GLN
Sbjct: 224 RDENTHLWLFRSLINDLKKEREDLFVPELQNYYRNMLKEGVEQEIAWGKYAIGNEIAGLN 283
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
E Y++++ N R +GLE L+ W+ E D + +FFE +VT Y
Sbjct: 284 EKMIEDYIKYLGNLRAKGLGLEALYEGFDEIPESMKWVDEYSDPNGVKTDFFEAKVTAYS 343
Query: 118 QGAELKWD 125
+ + ++ D
Sbjct: 344 KSSIIEDD 351
>gi|167748341|ref|ZP_02420468.1| hypothetical protein ANACAC_03085 [Anaerostipes caccae DSM 14662]
gi|167652333|gb|EDR96462.1| hypothetical protein ANACAC_03085 [Anaerostipes caccae DSM 14662]
Length = 358
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +++ ++K E P L+ + R M+ + EI + H + GL
Sbjct: 230 RDENTHLWLFKNILLELKKEEPSLFHPDCINDYRRMIKKGCEQEIRWGHYVIGDEIQGLK 289
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
E+Y++++ N RC +G EP++ +E W+S+ + + +FFE + T Y
Sbjct: 290 KEMVEEYIRYLGNLRCQNLGFEPIYPGSETEPESMSWVSQFSNANMIKTDFFEAKSTAYA 349
Query: 118 QGAELKWD 125
+ + L D
Sbjct: 350 KSSALVDD 357
>gi|223983469|ref|ZP_03633655.1| hypothetical protein HOLDEFILI_00935 [Holdemania filiformis DSM
12042]
gi|223964641|gb|EEF68967.1| hypothetical protein HOLDEFILI_00935 [Holdemania filiformis DSM
12042]
Length = 348
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I +++ E P L+T E +Q R ML + EI + + GLN
Sbjct: 220 RDENTHLWLFRSMILELRKEEPQLFTPEREQLYREMLKQGVEEEIEWGCAILGDEIPGLN 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N R I LE L+ E W+S+ + + +FFE R + Y
Sbjct: 280 KTMIRDYIRYLGNLRAKAIHLEILYPGEEEEPASMKWVSQYANANLIKTDFFEARSSAYA 339
Query: 118 QGAELKWD 125
+ + LK D
Sbjct: 340 KASALKDD 347
>gi|42525851|ref|NP_970949.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
denticola ATCC 35405]
gi|41815901|gb|AAS10830.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
denticola ATCC 35405]
Length = 351
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I +++ E P L+T + + R M+ E EIA+ + GLN
Sbjct: 223 RDENTHLWLFRSMIQELQKEEPQLFTPQNVELFRAMIKEGCEQEIAWGDYVIGNDIPGLN 282
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
+ Y+Q++ N RC +G P++ + E P W S+ + + +FFE + T Y
Sbjct: 283 SQMITDYIQYLGNLRCENLGFAPIYDGHREEPQSMSWASQYSNANLIKTDFFEAKSTAYA 342
Query: 118 QGAELKWD 125
+ + + D
Sbjct: 343 KSSAMVDD 350
>gi|157164305|ref|YP_001467763.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
concisus 13826]
gi|112800348|gb|EAT97692.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
concisus 13826]
Length = 340
Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E P L+T E + K M +A LEI + +G
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFTPETEAKIYDMFEKAGNLEIKWGKYITQNQIMGFT 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
EQY+ ++ ++R IGL+ + +P W+ + ++ NFFE +VT Y +G+
Sbjct: 276 DDIIEQYIHYLIDQRLVAIGLKRKYNVA-HPIKWVDDFAKFNDQKSNFFEAKVTNYSKGS 334
Query: 121 ELKWD 125
D
Sbjct: 335 ISFDD 339
>gi|298207002|ref|YP_003715181.1| probable ribonucleoside-diphosphate reductase small chain
[Croceibacter atlanticus HTCC2559]
gi|83849636|gb|EAP87504.1| probable ribonucleoside-diphosphate reductase small chain
[Croceibacter atlanticus HTCC2559]
Length = 325
Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H +F + + N+ HL K +++ R ++ +A +E + E++P +G+N
Sbjct: 198 RDEGMHCDFAVHLHNK------HLVNKVSKERIREIIVDALNIEREFITESLPASLIGMN 251
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F+ +R ++ E + NPF +M +I L+ + NFFE RV +YQ+
Sbjct: 252 SNLMTQYLEFVTDRLLLELECEKEYNTA-NPFDFMD-MISLQGKTNFFEKRVGDYQKAGV 309
Query: 122 LKWD 125
+ D
Sbjct: 310 MDQD 313
>gi|224539244|ref|ZP_03679783.1| hypothetical protein BACCELL_04146 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519126|gb|EEF88231.1| hypothetical protein BACCELL_04146 [Bacteroides cellulosilyticus
DSM 14838]
Length = 349
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I ++K E P L+T + Q M+ E EI + + GLN
Sbjct: 221 RDENTHLWLFRSIILELKKEEPELFTPDKVQIYENMMREGVKQEIEWGQYVIGDNIQGLN 280
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+ ++ N R +G PL+++ W+ + + + +FFE + T Y
Sbjct: 281 RQMIADYIHYLGNLRWSSLGNPPLYEHNRKEPESMHWVLQYSNANMVKTDFFEAKSTAYA 340
Query: 118 QGAELKWD 125
+ L+ D
Sbjct: 341 KSTALEDD 348
>gi|254521240|ref|ZP_05133295.1| ribonucleoside-diphosphate reductase, beta subunit
[Stenotrophomonas sp. SKA14]
gi|219718831|gb|EED37356.1| ribonucleoside-diphosphate reductase, beta subunit
[Stenotrophomonas sp. SKA14]
Length = 339
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES H+ F + + ++ E P L+ E +Q+ ML EA E+ +A + + G G++
Sbjct: 213 RDESAHMEFAFESVRVVREEEPDLFDDEMKQQVYDMLAEAIECEVQFAEDVLSGGVAGIS 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY+Q A++ ++G+E + NP P+M E+ D+++ NFFE RV+ YQ G +
Sbjct: 273 TRDMRQYLQHCADQHFAKLGMEKKYNVR-NPLPFM-ELQDVQELTNFFERRVSAYQVGVQ 330
Query: 122 LK 123
+
Sbjct: 331 GE 332
>gi|190572323|ref|YP_001970168.1| putative ribonucleotide diphosphate reductase, small chain
[Stenotrophomonas maltophilia K279a]
gi|190010245|emb|CAQ43853.1| putative ribonucleotide diphosphate reductase, small chain
[Stenotrophomonas maltophilia K279a]
Length = 339
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES H+ F + + ++ E P L+ +E +Q+ ML EA E+ +A + + G G++
Sbjct: 213 RDESAHMEFAFESVRVVREEEPDLFDEEMKQQVYDMLAEAIECEVQFAEDVLSGGVAGIS 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY+Q A++ ++G+E + NP P+M E+ D+++ NFFE RV+ YQ G +
Sbjct: 273 TRDMRQYLQHCADQHFAKLGMEKKYNVR-NPLPFM-ELQDVQELTNFFERRVSAYQVGVQ 330
Query: 122 LK 123
+
Sbjct: 331 GE 332
>gi|210631890|ref|ZP_03297102.1| hypothetical protein COLSTE_00992 [Collinsella stercoris DSM 13279]
gi|210159815|gb|EEA90786.1| hypothetical protein COLSTE_00992 [Collinsella stercoris DSM 13279]
Length = 352
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I +++ E P L+T E + R ML E EIA+ + GL
Sbjct: 224 RDENTHLWLFRNIILELQKEEPQLFTSENVEMLRQMLEEGVRQEIAWGRYVLGDAIPGLT 283
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
E Y++++ N R +G L++ Y P W+S+ + + +FFE + T Y
Sbjct: 284 GDMVEGYIKYLGNLRWSSLGFGQLYEGYRSEPEDMAWVSQYSNANMVKTDFFEAKSTAYA 343
Query: 118 QGAELKWD 125
+ L D
Sbjct: 344 KSTALVDD 351
>gi|260912588|ref|ZP_05919119.1| ribonucleoside-diphosphate reductase [Prevotella sp. oral taxon 472
str. F0295]
gi|260633300|gb|EEX51459.1| ribonucleoside-diphosphate reductase [Prevotella sp. oral taxon 472
str. F0295]
Length = 348
Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I+++K E P +T E + M+ E EIA+ + GLN
Sbjct: 220 RDENTHLWLFRNIIHEMKKEEPEYFTPEKVKLYEEMMREGVRQEIAWGQYVIGDEVQGLN 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N R +G LF+ E P W+S+ + + +FFE + T Y
Sbjct: 280 GQMVNDYIRYLGNMRWRSLGFGNLFEDNIEEPENMRWVSQYANANMVKTDFFEAKSTAYA 339
Query: 118 QGAELKWD 125
+ ++ D
Sbjct: 340 KSTAIEDD 347
>gi|154149104|ref|YP_001405803.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
hominis ATCC BAA-381]
gi|153805113|gb|ABS52120.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
hominis ATCC BAA-381]
Length = 340
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E P L+ + K M +A LEI + +GL
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNDKNIAKIYEMFEKAGELEIKWGKYITQNQIMGLT 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
E+Y+ ++ + R IGL + +P W+ + ++ NFFE++VT Y +G+
Sbjct: 276 DEIIEEYIHYLVDNRLSAIGLNKKYN-ARHPIKWVDDFAKFNDQKSNFFESKVTNYSKGS 334
Query: 121 ELKWD 125
L +D
Sbjct: 335 -LNFD 338
>gi|315637824|ref|ZP_07893014.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
upsaliensis JV21]
gi|315482065|gb|EFU72679.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
upsaliensis JV21]
Length = 340
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E P L+ ++ K +M A LEI + +G
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFNEQNIDKIYSMFKRAGELEIKWGKYITQNQIMGFT 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
E+Y+ ++ ++R I L+ ++ ++P W+ + ++ NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLIAINLDRIYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334
Query: 121 ELKWD 125
D
Sbjct: 335 ISFDD 339
>gi|15639047|ref|NP_218493.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
pallidum subsp. pallidum str. Nichols]
gi|189025287|ref|YP_001933059.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
pallidum subsp. pallidum SS14]
gi|6093976|sp|O83092|RIR2_TREPA RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
AltName: Full=Ribonucleotide reductase small subunit
gi|3322311|gb|AAC65049.1| ribonucleoside-diphosphate reductase, subunit beta (nrdB)
[Treponema pallidum subsp. pallidum str. Nichols]
gi|189017862|gb|ACD70480.1| ribonucleoside-diphosphate reductase, subunit beta [Treponema
pallidum subsp. pallidum SS14]
gi|291059468|gb|ADD72203.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
pallidum subsp. pallidum str. Chicago]
Length = 351
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I +++ E P ++T + R M+ E EI + + GLN
Sbjct: 223 RDENTHLWLFRSIIQELQKEEPQVFTARNVRLFRDMIREGCEQEIKWGDYVIGDQIPGLN 282
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N RC +G EPL++ W+S+ + + +FFE + T Y
Sbjct: 283 RHMVADYIRYLGNLRCENLGFEPLYEGHRVEPESMSWVSQYSNANLIKTDFFEAKSTAYA 342
Query: 118 QGAELKWD 125
+ + + D
Sbjct: 343 KSSAMVDD 350
>gi|118443949|ref|YP_878438.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
novyi NT]
gi|118134405|gb|ABK61449.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
novyi NT]
Length = 342
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++I ++K ENP ++T+ ++ R M+ EI + +G+N
Sbjct: 214 RDEITHLILFQNIIKELKNENPDIFTESIMEEFRMMMKMGVEHEIKWGQYVTNNEILGIN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
E+Y+++++N R + IGLE L+ TE+P W+ L + +FFE +VT Y +
Sbjct: 274 DNLIEKYIKYLSNLRLNAIGLEVLYPEITEHPMEWIENFSKLNNTKTDFFEAKVTNYTKA 333
Query: 120 AELKWD 125
A +D
Sbjct: 334 AAFDFD 339
>gi|282598964|ref|YP_003358881.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
subunit beta [Deftia phage phiW-14]
gi|257219034|gb|ACV50049.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
subunit beta [Deftia phage phiW-14]
Length = 346
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE +H+ + ++ E+P L T E +++ + E + K + +
Sbjct: 205 LRDEGIHVEGSSLLYRKVMGEHPWLMTDEHKKQVYDLARAVVAAEDLFLDLAFKKYQLTM 264
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK---NFFETRVTEYQ 117
+ Y++++ NRR Q+G + +F+ P PW+ E++ K NFFETRV YQ
Sbjct: 265 TKDESKAYVRYMMNRRLLQLGHKAIFEVQGIPCPWIEEILGGAGGKRDSNFFETRVDNYQ 324
Query: 118 QGAEL 122
L
Sbjct: 325 ASGAL 329
>gi|187778605|ref|ZP_02995078.1| hypothetical protein CLOSPO_02200 [Clostridium sporogenes ATCC
15579]
gi|187772230|gb|EDU36032.1| hypothetical protein CLOSPO_02200 [Clostridium sporogenes ATCC
15579]
Length = 342
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++I ++K ENP+++T+E +++ R M+ EI + +GLN
Sbjct: 214 RDEVTHLVLFQNIIKELKSENPNIFTEELEEEFREMMRMGVEHEIKWGQYVTNNEILGLN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
++Y+++++N R IGL+PL+ ++P W+ L + +FFE +VT Y +
Sbjct: 274 DELIDKYIKYLSNLRLTAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFEAKVTNYTKA 333
Query: 120 AELKWD 125
A +D
Sbjct: 334 AVFDFD 339
>gi|47208564|emb|CAF96041.1| unnamed protein product [Tetraodon nigroviridis]
Length = 352
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 23/143 (16%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTML---------------------HE 40
RDE LH F + + + + K+ K+ ++
Sbjct: 199 RDEGLHCTFACLLYSYLVKKPSEDRVKDIITKAVSIEQVGGSYRSMDGNKPNREVLIKDA 258
Query: 41 ATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
+ E +P +G+N +QY++F+A+R +GL ++ ENPF +M E I
Sbjct: 259 TCFCLQEFLTEALPVDLIGMNRCLMKQYIEFVADRLFADLGLAKMYN-AENPFDFM-EAI 316
Query: 101 DLKKEKNFFETRVTEYQQGAELK 123
L+ + NFFE RV EYQ+ +
Sbjct: 317 SLEGKTNFFEKRVAEYQRFGIMS 339
>gi|86149605|ref|ZP_01067835.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
jejuni subsp. jejuni CF93-6]
gi|86151167|ref|ZP_01069382.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
jejuni subsp. jejuni 260.94]
gi|86153704|ref|ZP_01071907.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
jejuni subsp. jejuni HB93-13]
gi|88597173|ref|ZP_01100408.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
jejuni subsp. jejuni 84-25]
gi|121613260|ref|YP_999944.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
jejuni subsp. jejuni 81-176]
gi|157414529|ref|YP_001481785.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
jejuni subsp. jejuni 81116]
gi|167004901|ref|ZP_02270659.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
jejuni subsp. jejuni 81-176]
gi|218561895|ref|YP_002343674.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
jejuni subsp. jejuni NCTC 11168]
gi|283955655|ref|ZP_06373148.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
jejuni subsp. jejuni 1336]
gi|315123818|ref|YP_004065822.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
jejuni subsp. jejuni ICDCCJ07001]
gi|85839873|gb|EAQ57132.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
jejuni subsp. jejuni CF93-6]
gi|85841514|gb|EAQ58761.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
jejuni subsp. jejuni 260.94]
gi|85842665|gb|EAQ59877.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
jejuni subsp. jejuni HB93-13]
gi|87250215|gb|EAQ73173.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
jejuni subsp. jejuni 81-176]
gi|88190234|gb|EAQ94208.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
jejuni subsp. jejuni 84-25]
gi|112359601|emb|CAL34386.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
jejuni subsp. jejuni NCTC 11168]
gi|157385493|gb|ABV51808.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
jejuni subsp. jejuni 81116]
gi|283792880|gb|EFC31656.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
jejuni subsp. jejuni 1336]
gi|284925507|gb|ADC27859.1| ribonucleoside-diphosphate reductase subunit beta [Campylobacter
jejuni subsp. jejuni IA3902]
gi|307747171|gb|ADN90441.1| Ribonucleoside-diphosphate reductase subunit beta [Campylobacter
jejuni subsp. jejuni M1]
gi|315017540|gb|ADT65633.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
jejuni subsp. jejuni ICDCCJ07001]
gi|315928159|gb|EFV07477.1| ribonucleotide reductase, small chain family protein [Campylobacter
jejuni subsp. jejuni DFVF1099]
gi|315932030|gb|EFV10983.1| ribonucleotide reductase, small chain family protein [Campylobacter
jejuni subsp. jejuni 327]
Length = 340
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E P L+ E K M +A LEI + +G
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
E+Y+ ++ ++R I L+ L+ ++P W+ + ++ NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334
Query: 121 ELKWD 125
D
Sbjct: 335 ISFDD 339
>gi|283955349|ref|ZP_06372848.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
jejuni subsp. jejuni 414]
gi|283793109|gb|EFC31879.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
jejuni subsp. jejuni 414]
Length = 340
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E P L+ E K M +A LEI + +G
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
E+Y+ ++ ++R I L+ L+ ++P W+ + ++ NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334
Query: 121 ELKWD 125
D
Sbjct: 335 ISFDD 339
>gi|205356539|ref|ZP_03223302.1| ribonucleoside diphosphate reductase beta chain [Campylobacter
jejuni subsp. jejuni CG8421]
gi|205345544|gb|EDZ32184.1| ribonucleoside diphosphate reductase beta chain [Campylobacter
jejuni subsp. jejuni CG8421]
Length = 340
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E P L+ E K M +A LEI + +G
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
E+Y+ ++ ++R I L+ L+ ++P W+ + ++ NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334
Query: 121 ELKWD 125
D
Sbjct: 335 ISFDD 339
>gi|325261084|ref|ZP_08127822.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
D5]
gi|324032538|gb|EGB93815.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
D5]
Length = 347
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++ ++K E P L+T E +K R+M+ E EI + H + GLN
Sbjct: 219 RDENTHLWLFRSILMELKKEEPWLFTAEKTEKYRSMIREGCEQEIRWGHYVIGDDIQGLN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+Q++ N RC + LEP+++ E W+S+ + + +FFE R T Y
Sbjct: 279 REMITDYIQYLGNLRCRGLELEPVYEGHEKEPESMSWVSQFSNANMIKTDFFEARSTAYA 338
Query: 118 QGAELKWD 125
+ + L D
Sbjct: 339 KSSALVDD 346
>gi|11544904|emb|CAC17630.1| class I ribonucleotide-diphosphate reductase small subunit chain
[Streptomyces jumonjinensis]
Length = 322
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H+NF +V++ ++ E P L+ QQ+ ML EA E+ + + G G+N
Sbjct: 213 RDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLQEAVEAELQFGSDLCGDGLPGMN 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113
S +Y+Q +A++R ++G P++ +ENPF +M E+ +++ NFFE R
Sbjct: 273 TESMREYLQCVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFERRP 322
>gi|57237291|ref|YP_178304.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
jejuni RM1221]
gi|148926379|ref|ZP_01810063.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
jejuni subsp. jejuni CG8486]
gi|57166095|gb|AAW34874.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
jejuni RM1221]
gi|145844771|gb|EDK21876.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
jejuni subsp. jejuni CG8486]
gi|315057661|gb|ADT71990.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Campylobacter jejuni subsp. jejuni S3]
Length = 340
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E P L+ E K M +A LEI + +G
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
E+Y+ ++ ++R I L+ L+ ++P W+ + ++ NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334
Query: 121 ELKWD 125
D
Sbjct: 335 ISFDD 339
>gi|289449785|ref|YP_003474451.1| ribonucleoside-diphosphate reductase subunit beta [Clostridiales
genomosp. BVAB3 str. UPII9-5]
gi|289184332|gb|ADC90757.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridiales
genomosp. BVAB3 str. UPII9-5]
Length = 400
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++++++++E P L++ E ++ R M+ E EIA+ H + GL
Sbjct: 272 RDENTHLWLFRNILSELQVERPDLFSAELVEEYRAMIKEGAEQEIAWGHYVLGDDIPGLT 331
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+Q++AN R +G ++ + W+S+ D + +FFE + T Y
Sbjct: 332 RQMVTDYIQYLANLRAQNLGFAYIYPDNHSEPASMSWISQYSDANMVKTDFFEAKSTAYA 391
Query: 118 QGAELKWD 125
+ + D
Sbjct: 392 KSTAMIDD 399
>gi|299144102|ref|ZP_07037182.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
sp. oral taxon 386 str. F0131]
gi|298518587|gb|EFI42326.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
sp. oral taxon 386 str. F0131]
Length = 346
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I ++K E L+T+E + + ML E EI + + G+
Sbjct: 218 RDENTHLWLFRNIIQELKKEEVELFTEERINEYKCMLMEGVRQEIEWGQYVIGDNIQGIT 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
A + Y++++ N R IG LF N W+SE + + + +FFE +V+ Y
Sbjct: 278 AQMVKDYIEYLGNLRSRSIGFGNLFDRNIEEPNSMKWVSEYSNPNEIKTDFFEGKVSAYS 337
Query: 118 QGAELKWD 125
+ + + D
Sbjct: 338 KSSVFEDD 345
>gi|73979723|ref|XP_856346.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain
(Ribonucleotide reductase small chain) isoform 3 [Canis
familiaris]
Length = 381
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 22/122 (18%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +Q+ + ++ A +E + E +P +G+N
Sbjct: 269 RDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFLTEALPVKLIGMN 321
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+ ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 322 CTLMKQYIEFVFR--------------VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGV 366
Query: 122 LK 123
+
Sbjct: 367 MS 368
>gi|330837704|ref|YP_004412345.1| ribonucleotide reductase [Spirochaeta coccoides DSM 17374]
gi|329749607|gb|AEC02963.1| ribonucleotide reductase [Spirochaeta coccoides DSM 17374]
Length = 360
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++ +++ E P ++T + R M+ + EIA+ H + VGLN
Sbjct: 232 RDETTHLWLFRSILREMQKEEPAMFTPNLVDEYRAMIKQGADQEIAWGHYVIGDDIVGLN 291
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+Q++ N RC +G +P+++ + + P W+ + + + +FFE R T Y
Sbjct: 292 KDMVTDYIQYLGNLRCTDLGFQPIYEGHDKEPETMKWVGQYSNANLIKTDFFEARNTAYA 351
Query: 118 QGAELKWD 125
+ L D
Sbjct: 352 KSTSLLDD 359
>gi|319936387|ref|ZP_08010803.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
sp. 29_1]
gi|319808502|gb|EFW05054.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
sp. 29_1]
Length = 346
Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I +++ E P L+T + + R M+ EIA+ + GL
Sbjct: 218 RDENTHLWLFRNMILELQKEEPDLFTPDKIEVYRDMMKRGVEEEIAWGQYVLGDRIEGLT 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+ ++ N R + EPLF+ W+S + + +FFE R + Y
Sbjct: 278 MKMVSDYIHYLGNFRAQALNFEPLFEDYMQEPESMKWVSIYSNANDIKTDFFEARSSAYA 337
Query: 118 QGAELKWD 125
+ + L+ D
Sbjct: 338 KSSALEDD 345
>gi|302386033|ref|YP_003821855.1| ribonucleotide reductase [Clostridium saccharolyticum WM1]
gi|302196661|gb|ADL04232.1| ribonucleotide reductase [Clostridium saccharolyticum WM1]
Length = 368
Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I +++ E P L+++E + RTM+ E EIA+ + GL
Sbjct: 240 RDENTHLWLFRNIILELEKEEPKLFSRERIEVYRTMIKEGCEQEIAWGCYAIGDEVPGLT 299
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+ ++ N RC +G +++ + + P W+++ + + +FFE + T Y
Sbjct: 300 KEMITDYIMYLGNLRCASLGWGRIYEGHDKEPESMSWVNQFSNANLIKTDFFEAKSTAYA 359
Query: 118 QGAELKWD 125
+ + L D
Sbjct: 360 KSSALLDD 367
>gi|149916691|ref|ZP_01905193.1| putative ribonucleoside-diphosphate reductase beta chain
[Plesiocystis pacifica SIR-1]
gi|149822408|gb|EDM81797.1| putative ribonucleoside-diphosphate reductase beta chain
[Plesiocystis pacifica SIR-1]
Length = 356
Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES H+ F VI+ ++ + P L+ E + M+ EA E+A+A + + G GL
Sbjct: 230 RDESAHMAFAFSVIDVVRDQEPELFDAELEAAVVEMIEEAVACEVAFAEDLLGLGVAGLT 289
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
Y+++ A++R ++G+ + + NP +M E+ D+ + NFFE RV+ YQ G
Sbjct: 290 VADLRAYLEYCADQRLQRLGMATRYG-STNPLSFM-ELQDIPELANFFERRVSAYQHGVS 347
Query: 122 LKWD 125
D
Sbjct: 348 GTID 351
>gi|153952438|ref|YP_001397460.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
jejuni subsp. doylei 269.97]
gi|152939884|gb|ABS44625.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
jejuni subsp. doylei 269.97]
Length = 340
Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN + E P L+ E K M +A LEI + +G
Sbjct: 216 RDEITHLLLFQNMINSVHKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
E+Y+ ++ ++R I L+ L+ ++P W+ + ++ NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334
Query: 121 ELKWD 125
D
Sbjct: 335 ISFDD 339
>gi|255323570|ref|ZP_05364700.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
showae RM3277]
gi|255299284|gb|EET78571.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
showae RM3277]
Length = 340
Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E P L+T E + K M A LEI + +G
Sbjct: 216 RDEITHLLLFQNMINSVRTERPDLFTPETEAKIYDMFERAGELEIKWGKYITQNQIMGFT 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
EQY++++ ++R IGL+ + +P W+ + ++ NFFE +VT Y +G+
Sbjct: 276 DDIIEQYIRYLIDQRLVAIGLKRRYNVP-HPIKWVDDFAKFNDQKSNFFEAKVTNYSKGS 334
Query: 121 ELKWD 125
D
Sbjct: 335 ISFDD 339
>gi|317011285|gb|ADU85032.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori SouthAfrica7]
Length = 341
Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E ++ +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLIDEVIEMFKKAVEIEASWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKIYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|296082342|emb|CBI21347.3| unnamed protein product [Vitis vinifera]
Length = 227
Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
Query: 17 QIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI 72
QI IEN H L K +++ + ++ ++ +E + + +P VG+N+ QY++F+
Sbjct: 102 QIAIENIHSEILLRNKLSEERVKAIVADSVDIEREFVCDALPCALVGMNSALMSQYIEFV 161
Query: 73 ANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELK 123
A+R +G ++ + NPF WM E+I L+ + NFFE RV EYQ+ + +
Sbjct: 162 ADRLLGALGYGKMYNVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKASVMS 210
>gi|109947017|ref|YP_664245.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
acinonychis str. Sheeba]
gi|109714238|emb|CAJ99246.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
acinonychis str. Sheeba]
Length = 341
Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E ++ +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLIDEVIEMFKKAVKIEASWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKIYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|268678691|ref|YP_003303122.1| ribonucleoside-diphosphate reductase [Sulfurospirillum deleyianum
DSM 6946]
gi|268616722|gb|ACZ11087.1| Ribonucleoside-diphosphate reductase [Sulfurospirillum deleyianum
DSM 6946]
Length = 340
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN K E P L+T + K M +A LEI + +G
Sbjct: 216 RDEITHLLLFQNMINTTKKERPDLFTDALKAKVYEMFQKAGDLEIEWGKYITQNQIMGFT 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
E Y+ ++ + R +G + L+ +P W+ + ++ NFFE V+ Y +G+
Sbjct: 276 DDIIETYIHYLVDDRLTAVGFDKLYN-ASHPIKWVDDFSKFNDQKTNFFEGNVSNYSKGS 334
Query: 121 ELKWD 125
L +D
Sbjct: 335 -LSFD 338
>gi|320107274|ref|YP_004182864.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
gi|319925795|gb|ADV82870.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
Length = 346
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES HL F +V+ ++ + P LW E +++ M+ EA E +A + + G GL+
Sbjct: 220 RDESAHLEFAFEVVQVVRAQEPDLWDTELERQVVVMMEEAIDAEAQFAEDLLSGGVAGLS 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
QY+ ++A+ R ++G+ F +NPF +M E+ D+++ NFFE RV+ YQ
Sbjct: 280 VRDMRQYLGYVADSRLERLGIGAHFN-AKNPFSFM-ELQDVQELTNFFERRVSAYQTA 335
>gi|296271635|ref|YP_003654266.1| ribonucleoside-diphosphate reductase [Arcobacter nitrofigilis DSM
7299]
gi|296095810|gb|ADG91760.1| Ribonucleoside-diphosphate reductase [Arcobacter nitrofigilis DSM
7299]
Length = 339
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN + E P L+T E + K R M +A LE A+ +G
Sbjct: 215 RDEVTHLLLFQNMINSTRKERPDLFTPELEVKVRAMFRKAVELEAAWGAYITQGQILGFT 274
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
QY+Q++A++R +G +P + ++P PW+ + NFFE V Y +G+
Sbjct: 275 DGIITQYIQYLADKRLDAVGYKPEYNV-KHPIPWVDGYSSFNDQRTNFFEGNVVNYSKGS 333
Query: 121 ELKWD 125
+ +D
Sbjct: 334 -IDFD 337
>gi|223039245|ref|ZP_03609535.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
rectus RM3267]
gi|222879606|gb|EEF14697.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
rectus RM3267]
Length = 340
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E P L+T E + K M A LEI + +G
Sbjct: 216 RDEITHLLLFQNMINSVRTERPDLFTSEMEAKIYDMFKRAGELEIKWGKYITQNQIMGFT 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
EQY++++ ++R IGL+ + +P W+ + ++ NFFE +VT Y +G+
Sbjct: 276 DDIIEQYIRYLIDQRLVAIGLKRRYD-ARHPIKWVDDFAKFNDQKSNFFEAKVTNYSKGS 334
Query: 121 ELKWD 125
D
Sbjct: 335 ISFDD 339
>gi|109287926|ref|YP_654620.1| hypothetical protein MIV048L [Invertebrate iridescent virus 3]
gi|123878658|sp|Q197B2|RIR2_IIV3 RecName: Full=Probable ribonucleoside-diphosphate reductase small
subunit 048L; AltName: Full=Ribonucleotide reductase
small subunit
gi|106073549|gb|ABF82078.1| hypothetical protein MIV048L [Aedes taeniorhynchus iridescent
virus]
Length = 376
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 3 DESLHLNFGIDVINQIKIEN-PHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVGL 60
DE+ H N +++ + + +EN H+ + + R + LE + L
Sbjct: 250 DETHHTNSMMELFSTLVVENKSHIRLGVLEARVRDTARKIVQLEDGFIDLAFSMGEMRQL 309
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
A + Y+++I NRR +G PL+ ENP PW+ ++++ NFFE + TEY + +
Sbjct: 310 TADDVKSYIRYITNRRLQTMGYLPLYSVVENPLPWVEDLLNAPSHTNFFENKPTEYAKAS 369
Query: 121 -ELKW 124
W
Sbjct: 370 LTGDW 374
>gi|288928561|ref|ZP_06422408.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
oral taxon 317 str. F0108]
gi|288331395|gb|EFC69979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
oral taxon 317 str. F0108]
Length = 348
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I+++K E P +T E + M+ E EIA+ + GLN
Sbjct: 220 RDENTHLWLFRNIIHEMKKEEPEYFTPEKVKVYEEMMREGVRQEIAWGQYVIGDEVQGLN 279
Query: 62 APSCEQYMQFIANRRCHQIGLEP-LFKYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
A Y++++ N R +G L E P W+++ + + +FFE + T Y
Sbjct: 280 AQMVNDYIRYLGNMRWRSLGFGNLLEDNIEEPENMRWVAQYANANMVKTDFFEAKSTAYA 339
Query: 118 QGAELKWD 125
+ ++ D
Sbjct: 340 KSTAIEDD 347
>gi|307565004|ref|ZP_07627521.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
amnii CRIS 21A-A]
gi|307346317|gb|EFN91637.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
amnii CRIS 21A-A]
Length = 347
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I ++K E P L+T E M+ E EIA+ + GL
Sbjct: 219 RDENTHLWLFRNIIVELKQEEPDLFTPEKVAVYEEMMREGVRQEIAWGQYVIGNDVQGLT 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N R +G + LF+ + P W+++ + + +FFE + T Y
Sbjct: 279 QQMVYDYIRYLGNLRWKSLGFDYLFEDNQAEPADMQWVAQYSNANMVKTDFFEAKSTAYA 338
Query: 118 QGAELKWD 125
+ L D
Sbjct: 339 KSTALIDD 346
>gi|225568010|ref|ZP_03777035.1| hypothetical protein CLOHYLEM_04083 [Clostridium hylemonae DSM
15053]
gi|225163184|gb|EEG75803.1| hypothetical protein CLOHYLEM_04083 [Clostridium hylemonae DSM
15053]
Length = 355
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++ ++K E P L+ E + R M+ E EI + H + GL
Sbjct: 227 RDENTHLWLFRSMLQELKKEEPQLFAAEDIKMYRQMIREGCEQEIRWGHYVIGDKIQGLT 286
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N RC +G E +++ + W+ + + + +FFE + T Y
Sbjct: 287 KDMITSYIRYLGNLRCTGLGFERIYEGYDTIPESMRWVEQYSNANLIKTDFFEAKSTAYA 346
Query: 118 QGAELKWD 125
+ + L D
Sbjct: 347 KSSALVDD 354
>gi|15613065|ref|NP_241368.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
halodurans C-125]
gi|14195134|sp|Q9KFH7|RIR2_BACHD RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
AltName: Full=Ribonucleotide reductase small subunit
gi|10173115|dbj|BAB04221.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
halodurans C-125]
Length = 345
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH+ ++ ++ +E P L T+E + +T L +A LE + + G+N
Sbjct: 217 RDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLMKAADLEKDWFRYIIGDKIPGIN 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
E Y+ FIAN+R Q+G+E + + NP W+ D+ + +FFE + +Y +
Sbjct: 277 PEDMETYISFIANKRAVQLGMEKPYPEIKHNPMKWIRAYEDVNSGKSDFFEQKSRQYAKV 336
Query: 120 AE 121
+
Sbjct: 337 SA 338
>gi|304439119|ref|ZP_07399038.1| ribonucleotide-diphosphate reductase beta subunit [Peptoniphilus
duerdenii ATCC BAA-1640]
gi|304372478|gb|EFM26065.1| ribonucleotide-diphosphate reductase beta subunit [Peptoniphilus
duerdenii ATCC BAA-1640]
Length = 347
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I +K E P L+T+E ++ R +L EIA+ + GL
Sbjct: 219 RDENTHLWLFRSIILDLKKEQPELFTEEKVEEYRALLKYGVEEEIAWGKYVIGDDIQGLT 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLK-KEKNFFETRVTEYQ 117
+ E Y++++ N R +G EPL++ + W+++ D+ + +FFE +VT Y
Sbjct: 279 SKMVEDYIKYLGNLRATNLGFEPLYEGYDKEVESMKWVTQYADINLLKTDFFEAKVTAYS 338
Query: 118 QGAELKWD 125
+ A ++ D
Sbjct: 339 KSAIIEDD 346
>gi|317014473|gb|ADU81909.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori Gambia94/24]
Length = 341
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E ++ +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKIYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|269105083|ref|ZP_06157778.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268160718|gb|EEZ39216.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 310
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 10/126 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K QQ+ + EA +E + E +P +G+N
Sbjct: 190 RDEGLHFSFSALLFKTL------GQGKVTQQEFEEICREAVSIEKEFVTEALPVDLIGMN 243
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA- 120
A QY++ A+ G +P+F Y +NPF +M ++D++ + NFFE RVTEY++
Sbjct: 244 AELMCQYIEHTADVIAGLFGFDPIF-YAKNPFDYM-RLLDMEGKTNFFEKRVTEYKRPQD 301
Query: 121 -ELKWD 125
+L +D
Sbjct: 302 RQLSFD 307
>gi|313836278|gb|EFS73992.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL037PA2]
gi|314928743|gb|EFS92574.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL044PA1]
gi|314971220|gb|EFT15318.1| ribonucleoside-diphosphate reductase, beta subunit
[Propionibacterium acnes HL037PA3]
gi|328906508|gb|EGG26283.1| ribonucleotide-diphosphate reductase subunit beta
[Propionibacterium sp. P08]
Length = 324
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 69/116 (59%), Gaps = 5/116 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLHL FG+++I + ENP + T EF + M+ + +E Y + +P+G G+
Sbjct: 204 VRDESLHLKFGMNLILTVLEENPDIATDEFAVEIHDMILKGVEMEAQYNRDMLPRGIPGM 263
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
NA Y++++A+RR ++GLEP + + NP WM+ D + NFFET T Y
Sbjct: 264 NAD----YVKYLADRRLEELGLEPEY-HVANPAKWMATANDTLQLVNFFETTNTSY 314
>gi|225712968|gb|ACO12330.1| Ribonucleoside-diphosphate reductase small chain [Lepeophtheirus
salmonis]
Length = 335
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 66/127 (51%), Gaps = 12/127 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H +F + + HL K + ++ E +E + +++P G +G+N
Sbjct: 209 RDEGSHTDFACLLYS-------HLENKLDPKYVLQIIKEGVEIEKEFVADSLPVGLIGMN 261
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ--- 118
A + Y++F+A+ + +E + +T+NPF +M I + + NFF+ RV+EYQ+
Sbjct: 262 AKMMKNYIEFVADNLLENLNIEK-YYHTKNPFNFMDN-ISMTGKTNFFDKRVSEYQRPFV 319
Query: 119 GAELKWD 125
+E + D
Sbjct: 320 ASEKEND 326
>gi|310831442|ref|YP_003970085.1| putative ribonucleoside-diphosphate reductase small subunit
[Cafeteria roenbergensis virus BV-PW1]
gi|309386626|gb|ADO67486.1| putative ribonucleoside-diphosphate reductase small subunit
[Cafeteria roenbergensis virus BV-PW1]
Length = 326
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 9/118 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H ++ I + + ++ K Q+K + M +A E + E++P +G+N
Sbjct: 201 RDEGMHCDYSIMLYHMLQ-------NKLSQEKIQQMFKDAVETERIFICESLPCSLLGMN 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
A EQY++F+A++ ++G +FK +NPF WM E I ++ + NFFE R T+YQ+
Sbjct: 254 ADLMEQYIKFVADQLIIKLGYNKIFKV-DNPFTWM-EAISIEGKTNFFEHRPTQYQRA 309
>gi|289548460|ref|YP_003473448.1| ribonucleoside-diphosphate reductase [Thermocrinis albus DSM 14484]
gi|289182077|gb|ADC89321.1| Ribonucleoside-diphosphate reductase [Thermocrinis albus DSM 14484]
Length = 342
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H++ ++I +K ENP L+T E ++ + A EI + +G+N
Sbjct: 218 RDELTHVSLFRNIILTLKKENPELFTPEMEKWVKEFFRYAASEEIKWGQYVTRNQILGIN 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
++Y++++AN R QIG EP+F TENP W+ + + +FF+ + Y +
Sbjct: 278 DQLIDRYIKYLANLRLTQIGYEPVFPDVTENPMKWIDTFRTINDTKTDFFQAKPQTYAKR 337
Query: 120 AELKW 124
+ELKW
Sbjct: 338 SELKW 342
>gi|188588149|ref|YP_001919720.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
botulinum E3 str. Alaska E43]
gi|251778737|ref|ZP_04821657.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum E1 str. 'BoNT E Beluga']
gi|188498430|gb|ACD51566.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum E3 str. Alaska E43]
gi|243083052|gb|EES48942.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum E1 str. 'BoNT E Beluga']
Length = 344
Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I +++ ENP +T + + + + M+ EI + H + G+N
Sbjct: 218 RDENTHLWLFRNIIKELQSENPESFTTDLKNELKEMMRIGVENEILWGHYVIGDKIQGIN 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
E Y++++ N+R +IGL LF+ + ENP W+ V + + +FFE + T Y +
Sbjct: 278 KKLIEDYIKYLGNKRLKEIGLGMLFEGFEENPATWVDVVANSNSVKTDFFEAKSTAYAKV 337
Query: 120 AELKWD 125
+ L D
Sbjct: 338 STLIDD 343
>gi|315635423|ref|ZP_07890689.1| ribonucleotide-diphosphate reductase beta subunit [Arcobacter
butzleri JV22]
gi|315480181|gb|EFU70848.1| ribonucleotide-diphosphate reductase beta subunit [Arcobacter
butzleri JV22]
Length = 339
Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E P L+T+E ++ R M +A LE ++ +G
Sbjct: 215 RDEVTHLLLFQNMINSVRKERPDLFTQELEETVRAMFRKAVDLEASWGAYITQGQILGFT 274
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
QY++++A+RR +G + + ++P PW+ + NFFE V Y +G+
Sbjct: 275 DGIIRQYIEYLADRRLEAVGYKAEYGV-KHPIPWVDGYASFNDQRTNFFEGNVVNYSKGS 333
Query: 121 ELKWD 125
+ +D
Sbjct: 334 -IDFD 337
>gi|154174558|ref|YP_001409201.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
curvus 525.92]
gi|112803525|gb|EAU00869.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
curvus 525.92]
Length = 340
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T E ++K M +A LEI + +G
Sbjct: 216 RDEITHLLLFQNMINSVRAERSDLFTPEMEEKIYDMFEKAGNLEIKWGRYITQNQIMGFT 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
E+Y+ ++ ++R IGL+ + ++P W+ + ++ NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLVAIGLKRKYN-AKHPIKWVDDFAKFNDQKSNFFESKVTNYSKGS 334
Query: 121 ELKWD 125
L +D
Sbjct: 335 -LSFD 338
>gi|282860353|ref|ZP_06269421.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
bivia JCVIHMP010]
gi|282586851|gb|EFB92088.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
bivia JCVIHMP010]
Length = 347
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I ++K E P L+T E M+ E EIA+ + GL
Sbjct: 219 RDENTHLWLFRNMIIELKQEEPELFTPEKVAIYEAMMREGVAQEIAWGQYVIGNEVQGLT 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENP---FPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N R +G + LF+ + W+++ + + +FFE + T Y
Sbjct: 279 QQMVSDYIRYLGNLRWKSLGFDYLFEDNQTEPTDMEWVAQYSNANMVKTDFFEAKSTAYA 338
Query: 118 QGAELKWD 125
+ L D
Sbjct: 339 KSTALIDD 346
>gi|257458932|ref|ZP_05624052.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
gracilis RM3268]
gi|257443636|gb|EEV18759.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
gracilis RM3268]
Length = 340
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+ K K M A LEI + +G
Sbjct: 216 RDEITHLLLFQNMINSVRKERADLFNKRNVDKIYEMFETAGNLEIDWGKYITDNQIMGFT 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
E+Y+ ++ ++R IGLE + ++P W+ + ++ NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLLAIGLEKRYD-AKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334
Query: 121 ELKWD 125
L +D
Sbjct: 335 -LSFD 338
>gi|222824493|ref|YP_002576067.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
lari RM2100]
gi|222539714|gb|ACM64815.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
lari RM2100]
Length = 340
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+ K M +A LEI + +G
Sbjct: 216 RDEITHLLLFQNMINSVRKERADLFNDTNVSKIYDMFKKAGELEIKWGKYITQNQIMGFT 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQGA 120
E+Y+ ++ ++R I L+ ++ ++P W+ + ++ NFFE++VT Y +G+
Sbjct: 276 DDIIEEYIHYLVDQRLIAINLDKIYNV-KHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS 334
Query: 121 ELKWD 125
L +D
Sbjct: 335 -LSFD 338
>gi|56555145|gb|AAV98100.1| RR2 protein [Shrimp white spot syndrome virus]
Length = 328
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F ++ + ++ P +++ ++ EA +E + ++P VG+N
Sbjct: 226 RDEGLHRDFACMLLKKGFVDTP------SRERILEIVTEAVRIEQEFLTVSLPVKLVGMN 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 112
QY++F+A++ ++GLE + T NPFP+M I L+ + NFFE R
Sbjct: 280 CKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN-ISLENKTNFFEKR 328
>gi|313887688|ref|ZP_07821370.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
harei ACS-146-V-Sch2b]
gi|312846297|gb|EFR33676.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
harei ACS-146-V-Sch2b]
Length = 346
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I ++K E P ++T E +K + ML + EIA+ + GLN
Sbjct: 218 RDENTHLWLFRSIILEMKKEEPEIFTDENIEKYKEMLKKGVEEEIAWGKYVIGDEIKGLN 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
E Y+ ++ N R +G LF W+SE D + + +FFE R + Y
Sbjct: 278 EKMIEDYIMYLGNLRSRNLGFGNLFDENIDEPESMKWVSEYSDPNQIKTDFFEARPSAYS 337
Query: 118 QGAELKWD 125
+ + ++ D
Sbjct: 338 KSSVIEDD 345
>gi|308184827|ref|YP_003928960.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori SJM180]
gi|308060747|gb|ADO02643.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori SJM180]
Length = 341
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E+++ +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEVSWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|168186576|ref|ZP_02621211.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum C str. Eklund]
gi|169295422|gb|EDS77555.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
botulinum C str. Eklund]
Length = 342
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++I ++K EN ++T+ ++ R M+ EI + +G+N
Sbjct: 214 RDEITHLILFQNIIKELKNENLDIFTESIIEEFRMMMKTGVEHEIKWGQYVTNNEILGIN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
E+Y+++++N R + IGLE L+ TE+P W+ L + +FFE +VT Y +
Sbjct: 274 NNLIEKYIKYLSNLRLNAIGLEVLYPEITEHPMEWIENFSKLNNTKTDFFEAKVTNYTKA 333
Query: 120 AELKWD 125
A +D
Sbjct: 334 AAFDFD 339
>gi|157736292|ref|YP_001488975.1| ribonucleotide-diphosphate reductase subunit beta [Arcobacter
butzleri RM4018]
gi|157698146|gb|ABV66306.1| ribonucleoside-diphosphate reductase, beta chain [Arcobacter
butzleri RM4018]
Length = 339
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E P L+T E ++ R M +A LE ++ +G
Sbjct: 215 RDEVTHLLLFQNMINSVRKERPDLFTSELEETVRAMFRKAVDLEASWGAYITQGQILGFT 274
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
QY++++A+RR +G + + ++P PW+ + NFFE V Y +G+
Sbjct: 275 DGIIRQYIEYLADRRLEAVGYKAEYGV-KHPIPWVDGYASFNDQRTNFFEGNVVNYSKGS 333
Query: 121 ELKWD 125
+ +D
Sbjct: 334 -IDFD 337
>gi|315586979|gb|ADU41360.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
pylori 35A]
Length = 341
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E ++ +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|254779643|ref|YP_003057749.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori B38]
gi|254001555|emb|CAX29573.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
reductase small subunit) [Helicobacter pylori B38]
Length = 341
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E ++ +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|15612081|ref|NP_223733.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori J99]
gi|11387046|sp|Q9ZKC3|RIR2_HELPJ RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
AltName: Full=Ribonucleotide reductase small subunit
gi|4155613|gb|AAD06604.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 BETA CHAIN [Helicobacter
pylori J99]
gi|307637755|gb|ADN80205.1| Ribonucleotide reductase of classIa beta subunit [Helicobacter
pylori 908]
gi|325996356|gb|ADZ51761.1| Ribonucleotide reductase of class Ia beta subunit [Helicobacter
pylori 2018]
gi|325997944|gb|ADZ50152.1| Ribonucleosidase diphosphate reductase beta subunit [Helicobacter
pylori 2017]
Length = 341
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E ++ +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|322510501|gb|ADX05815.1| putative ribonucleotide reductase small subunit [Organic Lake
phycodnavirus 1]
Length = 324
Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 70/118 (59%), Gaps = 9/118 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+LH F + + ++++ + +E + EA ++E + E++P +G+N
Sbjct: 201 RDEALHTEFAVHLFHKLEKKINKKKIREIIE-------EAVVIEKEFIVESLPCRLIGMN 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ QY++++A+R Q+G E ++ T NPF +M E+I L+++ NFFE+RV+EY
Sbjct: 254 SDLMTQYIEYVADRLMIQLGCEEIY-RTNNPFDFM-ELISLEQKTNFFESRVSEYSLA 309
>gi|269963257|ref|ZP_06177590.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
gi|269832005|gb|EEZ86131.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
Length = 310
Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K QQ+ + EA +E + E +P +G+N
Sbjct: 190 RDEGLHFSFSALLFKTL------GQGKVTQQEFEEICREAVSIEKEFVTEALPVDLIGMN 243
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA- 120
A QY++ A+ G P+F ENPF +M ++D++ + NFFE RVTEY++
Sbjct: 244 AELMCQYIEHTADVIAGLFGFTPIFG-AENPFDYM-RLLDMEGKTNFFEKRVTEYKRPQD 301
Query: 121 -ELKWD 125
+L +D
Sbjct: 302 RQLSFD 307
>gi|11544907|emb|CAC17632.1| class I ribonucleotide-diphosphate reductase small chain
[Streptomyces microflavus]
Length = 321
Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H+NF +V++ ++ E P L+ Q++ ML EA E+ + + +G G+N
Sbjct: 212 RDETMHMNFAFEVVDTVRKEEPELFDDALQEQVTAMLKEAVEAELQFGRDLCGEGLPGMN 271
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113
S +Y+Q +A++R ++G P++ +ENPF +M E+ +++ NFFE R
Sbjct: 272 TESMREYLQCVADQRLTRLGFAPVYG-SENPFAFM-ELQGVQELTNFFERRP 321
>gi|323487827|ref|ZP_08093085.1| ribonucleotide-diphosphate reductase subunit beta [Planococcus
donghaensis MPA1U2]
gi|323398561|gb|EGA91349.1| ribonucleotide-diphosphate reductase subunit beta [Planococcus
donghaensis MPA1U2]
Length = 348
Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F I + ENP L T E Q T + +A LE +A + GL+
Sbjct: 220 RDEMQHAYFIAQFIRIMLTENPELHTDENIQYIYTTIDKAVQLEKEWAQYILAD-IEGLD 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM----SEVIDLKKEKNFFETRVTEYQ 117
+Y++++AN+R Q+GL+ L++ NP PW+ ++++ + +FFE + Y
Sbjct: 279 LVEFGEYVEYLANKRLRQLGLDNLYEERSNPMPWIQVFGDDMMN-DTKSDFFEQKSRTYT 337
Query: 118 QGAELK 123
+ ++
Sbjct: 338 KVSQTN 343
>gi|229816571|ref|ZP_04446870.1| hypothetical protein COLINT_03629 [Collinsella intestinalis DSM
13280]
gi|229807906|gb|EEP43709.1| hypothetical protein COLINT_03629 [Collinsella intestinalis DSM
13280]
Length = 352
Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I +++ E P L++ E R ML E EIA+ + GL
Sbjct: 224 RDENTHLWLFRSIILELQKEEPQLFSNENVTMLREMLEEGVRQEIAWGRYVLGDAIPGLT 283
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
E Y++++ N R +G L++ Y P W+S+ + + +FFE + T Y
Sbjct: 284 GDMVEGYIKYLGNLRWSSLGFGQLYEGYRTEPADMAWVSQYSNANMVKTDFFEAKSTAYA 343
Query: 118 QGAELKWD 125
+ L D
Sbjct: 344 KSTALVDD 351
>gi|317012862|gb|ADU83470.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori Lithuania75]
Length = 341
Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E ++ +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEASWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|332180128|gb|AEE15816.1| ribonucleotide reductase [Treponema brennaborense DSM 12168]
Length = 346
Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I ++K E P ++T+E ML E EI + + GL
Sbjct: 218 RDENTHLWLFKNIILELKKERPDMFTEEKVASYAEMLKEGVRQEIEWGEYVIGDDIPGLT 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+ ++ N R + PL+ + P W+S + + +FFE R T Y
Sbjct: 278 RKMVRDYITYLGNLRWTNLDFPPLYPGFDTEPEDMAWVSAYSNANMVKTDFFEARSTAYA 337
Query: 118 QGAELKWD 125
+ L D
Sbjct: 338 KSTALVDD 345
>gi|325831705|ref|ZP_08164922.1| ribonucleoside-diphosphate reductase, beta subunit [Eggerthella sp.
HGA1]
gi|325486576|gb|EGC89025.1| ribonucleoside-diphosphate reductase, beta subunit [Eggerthella sp.
HGA1]
Length = 347
Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +++ ++K E P L+T E ++ R M+ E EI + H + GLN
Sbjct: 219 RDENTHLWLFRNILLELKEEEPELFTPELVEEYRAMIKEGCEQEIRWGHYAIGDEVAGLN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+Q++ N RC Q+G EPL++ E W+S+ + + +FFE R T Y
Sbjct: 279 KQMVTDYIQYLGNLRCTQLGFEPLYEGHEREPESMSWVSQFSNANMIKTDFFEARSTAYA 338
Query: 118 QGAELKWD 125
+ + L D
Sbjct: 339 KSSALVDD 346
>gi|260591988|ref|ZP_05857446.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
veroralis F0319]
gi|260536272|gb|EEX18889.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
veroralis F0319]
Length = 348
Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I ++K E P ++T+E + M+ E EIA+ + GLN
Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTEEKVKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENP---FPWMSEVIDLKK-EKNFFETRVTEYQ 117
+ Y++++ N R +G L+ + W+ + + + +FFE R T Y
Sbjct: 280 SQMVSDYIRYLGNLRWSGLGFGFLYPDNQKEPENMKWVGQYSNANMVKTDFFEARSTAYA 339
Query: 118 QGAELKWD 125
+ L D
Sbjct: 340 KSTALIDD 347
>gi|62866936|gb|AAY17359.1| ribonucleotide reductase small subunit [Haemonchus contortus]
Length = 374
Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DE +H + I IK K Q++ ++ +A +E + E++P +G+N
Sbjct: 250 DEGVHAISHVCCIQHIK-------NKLSQERIYYIIRDAVAIEQEFLSESLPVDMIGMNC 302
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
QY++++A+ ++G E + K ++NPF +M E I + + NFFE +V+EYQ+ L
Sbjct: 303 RLMCQYIEYVADHLLVELGCEKICK-SKNPFDFM-ENISIDGKTNFFEKKVSEYQRPGVL 360
Query: 123 K 123
Sbjct: 361 S 361
>gi|188527870|ref|YP_001910557.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori Shi470]
gi|188144110|gb|ACD48527.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori Shi470]
gi|308063873|gb|ADO05760.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori Sat464]
Length = 341
Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E ++ +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|261838422|gb|ACX98188.1| ribonucleoside-diphosphate reductase 1 beta subunit [Helicobacter
pylori 51]
Length = 341
Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E ++ +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|297380266|gb|ADI35153.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori v225d]
gi|308062365|gb|ADO04253.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori Cuz20]
gi|317180823|dbj|BAJ58609.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori F32]
Length = 341
Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E ++ +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|313900116|ref|ZP_07833616.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
HGF2]
gi|312955168|gb|EFR36836.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
HGF2]
Length = 347
Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I +++ E P L+T+E ++ + ML EI + + GL
Sbjct: 219 RDENTHLWLFRSMILELQKEEPQLFTEELIEEYKDMLRHGVEEEIRWGEYVIGNHIEGLT 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+ ++ N R + +G L+ EN W+S + + +FFE R + Y
Sbjct: 279 MEMVSDYIHYLGNLRSNSLGFGSLYDGFENEPKSMEWVSMYANANLIKTDFFEARSSAYA 338
Query: 118 QGAELKWD 125
+ + L D
Sbjct: 339 KSSALVDD 346
>gi|308183194|ref|YP_003927321.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori PeCan4]
gi|308065379|gb|ADO07271.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori PeCan4]
Length = 341
Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E ++ +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|317178607|dbj|BAJ56395.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori F30]
Length = 341
Score = 99.3 bits (246), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E ++ +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|210135249|ref|YP_002301688.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori P12]
gi|210133217|gb|ACJ08208.1| ribonucleoside-diphosphate reductase 1 beta subunit [Helicobacter
pylori P12]
Length = 341
Score = 99.3 bits (246), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E ++ +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|255658865|ref|ZP_05404274.1| ribonucleoside-diphosphate reductase, beta subunit [Mitsuokella
multacida DSM 20544]
gi|260849270|gb|EEX69277.1| ribonucleoside-diphosphate reductase, beta subunit [Mitsuokella
multacida DSM 20544]
Length = 347
Score = 99.3 bits (246), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +++ ++ E P L+T E ++ R M+ E EIA+ + GLN
Sbjct: 219 RDENTHLWLFRNILRDLRAEEPDLFTPEREEMMREMIREGVRQEIAWGKYAIGNEVEGLN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLK-KEKNFFETRVTEYQ 117
E Y+ ++ N R IGL L++ E W+S+ + + +F E R T Y
Sbjct: 279 EKMIEDYVHYLGNARAESIGLGTLYEGFEEEPSSMRWVSQYANPNFIKTDFIEGRSTAYA 338
Query: 118 QGAELKWD 125
+ L D
Sbjct: 339 KSTALVDD 346
>gi|317009697|gb|ADU80277.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori India7]
Length = 341
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E + +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|208434985|ref|YP_002266651.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
pylori G27]
gi|208432914|gb|ACI27785.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
pylori G27]
Length = 341
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E + +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|194363985|ref|YP_002026595.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
R551-3]
gi|194346789|gb|ACF49912.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
R551-3]
Length = 339
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES H++F + ++ I+ E P L+ + +Q ML EA E+ +A + + G G++
Sbjct: 213 RDESAHMDFAFECVDVIREEEPDLFDDKMKQDVYDMLAEAIECEVQFAEDVLSGGVAGIS 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
QY+Q A+ H++G+E + NP +M E+ D+++ NFFE R + YQ G +
Sbjct: 273 TRDMRQYLQHCADNHFHRLGMERKYNVR-NPLSFM-ELQDVQELTNFFERRASAYQVGVQ 330
Query: 122 LK 123
+
Sbjct: 331 GE 332
>gi|217032591|ref|ZP_03438080.1| hypothetical protein HPB128_159g17 [Helicobacter pylori B128]
gi|298735909|ref|YP_003728434.1| ribonucleoside-diphosphate reductase subunit beta [Helicobacter
pylori B8]
gi|216945727|gb|EEC24352.1| hypothetical protein HPB128_159g17 [Helicobacter pylori B128]
gi|298355098|emb|CBI65970.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
pylori B8]
Length = 341
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E + +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|167756571|ref|ZP_02428698.1| hypothetical protein CLORAM_02108 [Clostridium ramosum DSM 1402]
gi|237733862|ref|ZP_04564343.1| ribonucleotide-diphosphate reductase subunit beta [Mollicutes
bacterium D7]
gi|167702746|gb|EDS17325.1| hypothetical protein CLORAM_02108 [Clostridium ramosum DSM 1402]
gi|229382943|gb|EEO33034.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
sp. D7]
Length = 346
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++I +++ E P L+T E + R ML EIA+ + GL
Sbjct: 218 RDENTHLWLFRNMIIELQKEEPTLFTPEKIEVYRNMLKRGVEEEIAWGQYVLGNRIEGLT 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+ ++ N R + EPL++ E W+S + + +FFE + T Y
Sbjct: 278 MDMVSDYIHYLGNLRAFSLNFEPLYEGFETEPEAMKWVSIYSNANNIKTDFFEAKSTAYA 337
Query: 118 QGAELKWD 125
+ + ++ D
Sbjct: 338 KSSAIEDD 345
>gi|303389600|ref|XP_003073032.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
intestinalis ATCC 50506]
gi|303302176|gb|ADM11672.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
intestinalis ATCC 50506]
Length = 326
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH F + + + ++ + ++ +A +E + E++P +G+N
Sbjct: 202 RDEGLHCEFACLLHRRYLK--------QKCKRVKEVVMDAVEVEKRFLSESLPVDLIGMN 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+Y++F+A+ + E ++ +T NPF +M E I L + NFF+ R ++YQ+
Sbjct: 254 CQLMCKYIEFVADTLLENLEEEKIY-HTPNPFDFM-ENISLVGKTNFFDKRESQYQKA 309
>gi|291239432|ref|XP_002739627.1| PREDICTED: hCG23833-like [Saccoglossus kowalevskii]
Length = 309
Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 9/117 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH F + +IK P K R ++ E +E + + K +G+N
Sbjct: 190 RDEGLHCTFACTMYGKIKPRLPD-------TKVRKIVLEGCEVEKLFVKHALRKPLLGMN 242
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y+ F+ + +G E F NPFP+M I ++ + NFFE RVTEY +
Sbjct: 243 SHLMETYVNFVTDNLLTDLGYEKEFGV-NNPFPFMDN-ISMQGKTNFFERRVTEYTR 297
>gi|15606660|ref|NP_214040.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5]
gi|18202109|sp|O67475|RIR2_AQUAE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
AltName: Full=Ribonucleotide reductase small subunit;
Contains: RecName: Full=Aae nrdB intein; AltName:
Full=Aae RIR2 intein
gi|2983879|gb|AAC07431.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5]
Length = 696
Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Query: 5 SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPS 64
+ H+ ++IN ++ ENP L+T E ++ A EI + +G+N
Sbjct: 575 NCHVTLFRNIINTLRKENPELFTPEIEKWIVEYFKYAVNEEIKWGQYVTQNQILGINDVL 634
Query: 65 CEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK-EKNFFETRVTEYQQGAEL 122
E+Y++++ N R QIG +P++ TENP W+ E + + +FF+ + Y + EL
Sbjct: 635 IERYIKYLGNLRITQIGFDPIYPEVTENPLKWIDEFRKINNTKTDFFQAKPQTYSKANEL 694
Query: 123 KW 124
KW
Sbjct: 695 KW 696
>gi|217034470|ref|ZP_03439882.1| hypothetical protein HP9810_890g15 [Helicobacter pylori 98-10]
gi|216943072|gb|EEC22549.1| hypothetical protein HP9810_890g15 [Helicobacter pylori 98-10]
gi|317177841|dbj|BAJ55630.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori F16]
Length = 341
Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E + +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIESLWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|163801385|ref|ZP_02195284.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
AND4]
gi|159174874|gb|EDP59674.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
AND4]
Length = 310
Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K QQ+ + EA +E + E +P +G+N
Sbjct: 190 RDEGLHFSFSALLFKTL------GQGKVTQQEFEEICREAVSIEKEFVTEALPVDLIGMN 243
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA- 120
A QY++ A+ G P F +ENPF +M ++D++ + NFFE RVTEY++
Sbjct: 244 AELMCQYIEHTADVIADLFGFNPAFG-SENPFDYM-RLLDMEGKTNFFEKRVTEYKRPQD 301
Query: 121 -ELKWD 125
+L +D
Sbjct: 302 RQLSFD 307
>gi|288801822|ref|ZP_06407264.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
melaninogenica D18]
gi|302344783|ref|YP_003813136.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
melaninogenica ATCC 25845]
gi|288335864|gb|EFC74297.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
melaninogenica D18]
gi|302149273|gb|ADK95535.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
melaninogenica ATCC 25845]
Length = 348
Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I ++K E P ++T E + M+ E EIA+ + GLN
Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTPEKIKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENP---FPWMSEVIDLKK-EKNFFETRVTEYQ 117
A Y++++ N R +G L+ + W+ + + + +FFE + T Y
Sbjct: 280 AQMVSDYIRYLGNLRWSGLGFGFLYDDNQKEPENMKWVGQYSNANMVKTDFFEAKSTAYA 339
Query: 118 QGAELKWD 125
+ L D
Sbjct: 340 KSTALIDD 347
>gi|325268390|ref|ZP_08135022.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
multiformis DSM 16608]
gi|324989244|gb|EGC21195.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
multiformis DSM 16608]
Length = 348
Score = 98.5 bits (244), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I ++K E P ++T + + M+ E EIA+ + GLN
Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTPDRIKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N R +G L+ + P W+ + + + +FFE + T Y
Sbjct: 280 EQMVSDYIRYLGNLRWSGLGFGFLYDDNRKEPENMKWVGQYSNANMVKTDFFEAKSTAYA 339
Query: 118 QGAELKWD 125
+ L D
Sbjct: 340 KSTALADD 347
>gi|261839822|gb|ACX99587.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori 52]
Length = 341
Score = 98.5 bits (244), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E + +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|108563454|ref|YP_627770.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori HPAG1]
gi|107837227|gb|ABF85096.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
pylori HPAG1]
Length = 341
Score = 98.5 bits (244), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E + +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|15644992|ref|NP_207162.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori 26695]
gi|2500210|sp|P55983|RIR2_HELPY RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
AltName: Full=Ribonucleotide reductase small subunit
gi|2313466|gb|AAD07432.1| ribonucleoside diphosphate reductase, beta subunit (nrdB)
[Helicobacter pylori 26695]
Length = 341
Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E + +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|207092116|ref|ZP_03239903.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori HPKX_438_AG0C1]
Length = 341
Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E + +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|317182342|dbj|BAJ60126.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori F57]
Length = 341
Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E L+T + + M +A +E + +GL
Sbjct: 217 RDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWGDYITQGKILGLT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQGA 120
+ EQY+QF+A+ R ++G+ ++ ++P W+ ++ NFFE RV+ Y +G+
Sbjct: 277 SSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRSNFFEARVSNYAKGS 335
Query: 121 ELKWD 125
D
Sbjct: 336 VSFDD 340
>gi|253582918|ref|ZP_04860136.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
varium ATCC 27725]
gi|251835124|gb|EES63667.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
varium ATCC 27725]
Length = 348
Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ ++ +I+ ENP + ++ M +A EI + + + +G+
Sbjct: 220 RDELSHVVIFQHLLKEIRNENPDFFND---EEIYDMFRKAVEQEINWTNHIIGNQILGIT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ EQY +++AN R IGL+P++ + +NP+ +++ D + + NFFE VT Y
Sbjct: 277 EETTEQYTKWLANERLRSIGLKPIYDGFNKNPYKHLTKFADTEGEGNVKANFFEGTVTSY 336
Query: 117 QQGAELK-WD 125
+ + WD
Sbjct: 337 NMSSSIDGWD 346
>gi|257792030|ref|YP_003182636.1| ribonucleotide-diphosphate reductase subunit beta [Eggerthella
lenta DSM 2243]
gi|317488666|ref|ZP_07947206.1| ribonucleotide reductase [Eggerthella sp. 1_3_56FAA]
gi|257475927|gb|ACV56247.1| Ribonucleoside-diphosphate reductase [Eggerthella lenta DSM 2243]
gi|316912225|gb|EFV33794.1| ribonucleotide reductase [Eggerthella sp. 1_3_56FAA]
Length = 347
Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +++ ++K E P L+ E ++ R M+ E EI + H + GLN
Sbjct: 219 RDENTHLWLFRNILLELKEEEPELFAPELVEEYRAMIKEGCEQEIRWGHYAIGDDVAGLN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+Q++ N RC Q+G EPL++ E W+S+ + + +FFE R T Y
Sbjct: 279 KQMVTDYIQYLGNLRCAQLGFEPLYEGHEREPESMSWVSQFSNANMIKTDFFEARSTAYA 338
Query: 118 QGAELKWD 125
+ + L D
Sbjct: 339 KSSALVDD 346
>gi|51869996|ref|YP_073549.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate
China]
gi|51858204|gb|AAU10888.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate
China]
Length = 374
Score = 98.1 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 3/126 (2%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVG 59
+RDE++H+ + I E P + TK+F + T+ E LE A+
Sbjct: 250 IRDENVHVEGLCKLFKTIVSEYPFILTKDFYKAVETLQQEVLKLETAFVDLVFIEDKLKN 309
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
L Y+++I RR Q+GL +NP W+S +I + NFFE RVTEY G
Sbjct: 310 LKRVDVINYVKYILQRRTVQLGLSNKTDL-QNPILWVSWLISGRDVTNFFENRVTEYDVG 368
Query: 120 A-ELKW 124
E W
Sbjct: 369 GLEGDW 374
>gi|325859841|ref|ZP_08172971.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
denticola CRIS 18C-A]
gi|325482767|gb|EGC85770.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
denticola CRIS 18C-A]
Length = 348
Score = 98.1 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I ++K E P ++T + + M+ E EIA+ + GLN
Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTPDRIKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N R +G L+ + P W+ + + + +FFE + T Y
Sbjct: 280 EQMVSDYIRYLGNLRWSGLGFGFLYDDNRKEPENMKWVGQYSNANMVKTDFFEAKSTAYA 339
Query: 118 QGAELKWD 125
+ L D
Sbjct: 340 KSTALVDD 347
>gi|163781846|ref|ZP_02176846.1| ribonucleotide reductase beta chain [Hydrogenivirga sp. 128-5-R1-1]
gi|159883066|gb|EDP76570.1| ribonucleotide reductase beta chain [Hydrogenivirga sp. 128-5-R1-1]
Length = 350
Score = 98.1 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ ++I ++ E P L++ E ++ A EI + +G+N
Sbjct: 226 RDELTHVTLFRNMILNLQKEQPELFSPEIKKWIAEYFRYAIDQEIKWGQYVTQDQILGIN 285
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK-EKNFFETRVTEYQQG 119
++Y++++ N R QIGLEPL+ TENP W+ + + + +FF+ + Y +
Sbjct: 286 NQLIDRYIKYLGNLRITQIGLEPLYPEITENPMKWIDDFRKINNTKTDFFQRKPQTYAKA 345
Query: 120 AELKW 124
ELKW
Sbjct: 346 NELKW 350
>gi|317062933|ref|ZP_07927418.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
ulcerans ATCC 49185]
gi|313688609|gb|EFS25444.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
ulcerans ATCC 49185]
Length = 353
Score = 98.1 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ ++ +I+ ENP + ++ +M +A EI + + + +G+
Sbjct: 225 RDELSHVVIFQHLLKEIRNENPDFFND---EEIYSMFRKAVEQEINWTNHIIGNQILGIT 281
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ EQY +++AN R IGL+P+++ + +NP+ +++ D + + NFFE VT Y
Sbjct: 282 EETTEQYTKWLANERLRSIGLKPIYEGFNKNPYKHLTKFADTEGEGNVKANFFEGTVTSY 341
Query: 117 QQGAELK-WD 125
+ + WD
Sbjct: 342 NMSSSIDGWD 351
>gi|119360103|gb|ABL66780.1| At5g40942 [Arabidopsis thaliana]
Length = 231
Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 17 QIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI 72
QI IEN H L TK + + + ++ +A +E + + + VG+N QY++F+
Sbjct: 103 QIAIENIHSEILLRTKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMNRELMSQYIEFV 162
Query: 73 ANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELK 123
A+R +G ++ T NPF WM E+I L+ + NFFE RV EYQ+ + +
Sbjct: 163 ADRLLAALGCGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGEYQKASVMS 211
>gi|229495919|ref|ZP_04389645.1| ribonucleoside-diphosphate reductase, beta subunit [Porphyromonas
endodontalis ATCC 35406]
gi|229317232|gb|EEN83139.1| ribonucleoside-diphosphate reductase, beta subunit [Porphyromonas
endodontalis ATCC 35406]
Length = 346
Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I +++ E P L+T E + + M+ E L EIA+ + GL
Sbjct: 218 RDENTHLWLFRSMILELRREQPELFTPEREAEFLEMIREGALQEIAWGKYVIGDEIEGLT 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117
+ Y+ ++AN R +GL +F E W+S+ + + +FFE + + Y
Sbjct: 278 SQMVSDYIMYLANLRSANLGLGVIFPGHEEEPASMSWVSQYSNSNLIKTDFFEAKPSAYA 337
Query: 118 QGAELKWD 125
+ A ++ D
Sbjct: 338 KSASIEDD 345
>gi|229542075|ref|ZP_04431135.1| Ribonucleoside-diphosphate reductase [Bacillus coagulans 36D1]
gi|229326495|gb|EEN92170.1| Ribonucleoside-diphosphate reductase [Bacillus coagulans 36D1]
Length = 347
Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 4/125 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++I + E+P L T F E+ LE ++ + G++
Sbjct: 219 RDELEHGRFISELIRAVLSEHPELNTPAFSDWVYARFRESVDLETEWSEYVLQD-VEGID 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDL--KKEKNFFETRVTEYQQ 118
++++ AN+ IGL L+ + ENP W+ D + +FFE + Y +
Sbjct: 278 LEEMAGFIKYRANKMLRMIGLSELYPEHVENPMKWIRAYADNFDATKTDFFEQKSRSYTK 337
Query: 119 GAELK 123
++L
Sbjct: 338 VSDLN 342
>gi|257468678|ref|ZP_05632772.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
ulcerans ATCC 49185]
Length = 348
Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ ++ +I+ ENP + ++ +M +A EI + + + +G+
Sbjct: 220 RDELSHVVIFQHLLKEIRNENPDFFND---EEIYSMFRKAVEQEINWTNHIIGNQILGIT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ EQY +++AN R IGL+P+++ + +NP+ +++ D + + NFFE VT Y
Sbjct: 277 EETTEQYTKWLANERLRSIGLKPIYEGFNKNPYKHLTKFADTEGEGNVKANFFEGTVTSY 336
Query: 117 QQGAELK-WD 125
+ + WD
Sbjct: 337 NMSSSIDGWD 346
>gi|327312835|ref|YP_004328272.1| ribonucleoside-diphosphate reductase subunit beta [Prevotella
denticola F0289]
gi|326946303|gb|AEA22188.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
denticola F0289]
Length = 348
Score = 97.3 bits (241), Expect = 5e-19, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I ++K E P ++T + + M+ E EIA+ + GLN
Sbjct: 220 RDENTHLWLFRSIILELKKEEPDMFTSDKIKVYEDMMREGVRQEIAWGQYVIGNDVQGLN 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y++++ N R +G L+ + P W+ + + + +FFE + T Y
Sbjct: 280 EQMVSDYIRYLGNLRWSGLGFGFLYDDNRKEPENMKWVGQYSNANMVKTDFFEAKSTAYA 339
Query: 118 QGAELKWD 125
+ L D
Sbjct: 340 KSTALVDD 347
>gi|306819883|ref|ZP_07453537.1| ribonucleotide-diphosphate reductase beta subunit [Eubacterium
yurii subsp. margaretiae ATCC 43715]
gi|304552130|gb|EFM40067.1| ribonucleotide-diphosphate reductase beta subunit [Eubacterium
yurii subsp. margaretiae ATCC 43715]
Length = 347
Score = 97.3 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++ ++K E H++T+E R M+ + EI +A + GL+
Sbjct: 219 RDENTHLWLFRSILLELKKEEAHIFTQENINLFRNMIKQGVEEEIRWAKYAIGDNIQGLS 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
E Y++++ N RC +G + +++ E W+SE D + +FFE +V+ Y
Sbjct: 279 MSMIEDYLKYLGNLRCKGLGFDNIYEGYEKEPESMSWVSEYSDPNAIKTDFFEAKVSAYA 338
Query: 118 QGAELKWD 125
+ ++ D
Sbjct: 339 KSTVIEDD 346
>gi|224372455|ref|YP_002606827.1| ribonucleotide-diphosphate reductase subunit beta [Nautilia
profundicola AmH]
gi|223589410|gb|ACM93146.1| ribonucleoside-diphosphate reductase, beta subunit [Nautilia
profundicola AmH]
Length = 346
Score = 97.3 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H ++ +IK E P L+T E + + ML+ A LE + +G++
Sbjct: 219 RDEVTHTLLFANIFKEIKKEFPDLFTPEVIKNIKDMLYAAYELERDWGWYITNDEILGMS 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKK-EKNFFETRVTEYQQ 118
+++ Q++AN+R +GL+ LF +NP W + + NFFE V Y +
Sbjct: 279 KELIDRFTQYLANKRAQAMGLDLLFPEVGLKNPISWFDGFSSFNEQKTNFFEGNVVNYSK 338
Query: 119 GAELKWD 125
G+ D
Sbjct: 339 GSLNLDD 345
>gi|309775830|ref|ZP_07670824.1| ribonucleoside-diphosphate reductase, beta subunit
[Erysipelotrichaceae bacterium 3_1_53]
gi|308916368|gb|EFP62114.1| ribonucleoside-diphosphate reductase, beta subunit
[Erysipelotrichaceae bacterium 3_1_53]
Length = 347
Score = 97.3 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I +++ E PHL+T+E Q+ + ML EI + + GL
Sbjct: 219 RDENTHLWLFRSMILELQKEEPHLFTEELIQEYKDMLRHGVEEEIRWGEYVIGNNIEGLT 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-EKNFFETRVTEYQ 117
Y+ ++ N R + +G L++ E W+S + + +FFE R + Y
Sbjct: 279 MEMVSDYIHYLGNLRSNSLGFGSLYEGFESEPKSMEWVSMYANANLIKTDFFEARSSAYA 338
Query: 118 QGAELKWD 125
+ + L D
Sbjct: 339 KSSALVDD 346
>gi|288554979|ref|YP_003426914.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
pseudofirmus OF4]
gi|288546139|gb|ADC50022.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
pseudofirmus OF4]
Length = 344
Score = 96.9 bits (240), Expect = 7e-19, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH+ +V ++ E+P L +E + + L A LE+ + + + + G+
Sbjct: 216 RDEQLHVYLFTNVFKELLEEHPELNNREMESFVKQSLTTAVELELKWYNYIIGEQIEGVT 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
+ Y++FIAN+R Q+G + +F + N F W+ D+ + +FFE + +Y +
Sbjct: 276 SDEMGSYLKFIANKRAKQLGYDHIFPEHRTNVFKWIKAYEDVNAAKSDFFEQKSRQYAKV 335
Query: 120 AE 121
+
Sbjct: 336 SS 337
>gi|237749822|ref|ZP_04580302.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
bilis ATCC 43879]
gi|229374572|gb|EEO24963.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
bilis ATCC 43879]
Length = 351
Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL +I + E P L+T+ Q + M +A LE ++ +GL
Sbjct: 226 RDEITHLTIFQQMIISTRKERPDLFTQALQDEVMEMFRQAVDLESSWGEYITQGQILGLT 285
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEYQQG 119
A QY++++A++R + L+ T+NP W+ E ++ + NFFE +V Y +G
Sbjct: 286 AKIIRQYIEYLADKRLKAVDYPILYN-TQNPIQWVDEQVNFNNQRTNFFEAKVRNYTRG 343
>gi|169824933|ref|YP_001692544.1| ribonucleotide-diphosphate reductase subunit beta [Finegoldia magna
ATCC 29328]
gi|167831738|dbj|BAG08654.1| ribonucleoside-diphosphate reductase beta subunit [Finegoldia magna
ATCC 29328]
Length = 354
Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I +K E P L+T+E + + M+ + EI +A + + GL+
Sbjct: 226 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWAKYVIGEKIQGLS 285
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117
E Y++++ N R +G ++ E W+SE D K + +FFE + + Y
Sbjct: 286 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 345
Query: 118 QGAELKWD 125
+ A ++ D
Sbjct: 346 KSAIIEDD 353
>gi|297736972|emb|CBI26173.3| unnamed protein product [Vitis vinifera]
Length = 312
Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + P QK ++HEA +E + E +P +G+N
Sbjct: 171 RDEGLHCDFACLLYSLLQKQLP-------WQKVHHIVHEAVEIETQFVCEALPCALIGMN 223
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK 103
A QY++F+A+R +G E + ENPF WM E I L+
Sbjct: 224 ATLMSQYIKFVADRLLVALGYERKYNV-ENPFDWM-EFISLQ 263
>gi|156564205|ref|YP_001429715.1| nrd beta subunit [Bacillus phage 0305phi8-36]
gi|154622902|gb|ABS83782.1| nrd beta subunit [Bacillus phage 0305phi8-36]
Length = 352
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F +I ++ ENP L T+E Q L EA E +A E + GL+
Sbjct: 224 RDEMQHAYFIGLLIRRLLTENPELNTQENAQYIVDSLKEAVATEKEWAGEILAD-IEGLD 282
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW---MSEVIDLKKEKNFFETRVTEYQQ 118
+ Y++++AN+R Q+G++ +++ NP PW S+ + + + FE + +Y
Sbjct: 283 LEEFDHYIEYLANKRVRQLGMDNIYEERGNPMPWIQVFSDEMMEHTKTDQFENKSRDYSG 342
Query: 119 GAELK 123
+
Sbjct: 343 ATKKN 347
>gi|158430770|pdb|2RCC|A Chain A, Crystal Structure Of Putative Class I Ribonucleotide
Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
A Resolution
gi|158430771|pdb|2RCC|B Chain B, Crystal Structure Of Putative Class I Ribonucleotide
Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
A Resolution
gi|158430772|pdb|2RCC|C Chain C, Crystal Structure Of Putative Class I Ribonucleotide
Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
A Resolution
Length = 346
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH+ ++ ++ +E P L T+E + +T L +A LE + + G+N
Sbjct: 218 RDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLXKAADLEKDWFRYIIGDKIPGIN 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
E Y+ FIAN+R Q+G E + + NP W+ D+ + +FFE + +Y +
Sbjct: 278 PEDXETYISFIANKRAVQLGXEKPYPEIKHNPXKWIRAYEDVNSGKSDFFEQKSRQYAKV 337
Query: 120 AE 121
+
Sbjct: 338 SA 339
>gi|149194868|ref|ZP_01871962.1| ribonucleotide-diphosphate [Caminibacter mediatlanticus TB-2]
gi|149135027|gb|EDM23509.1| ribonucleotide-diphosphate [Caminibacter mediatlanticus TB-2]
Length = 346
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H ++ +IK E P L+T E + + ML+ A LE + +GL+
Sbjct: 219 RDEVTHTLLFANIFKEIKKEFPDLFTPEVIRNIKDMLYAAYELERDWGFYITNDEILGLS 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKK-EKNFFETRVTEYQQ 118
+++ +++AN+R H +GLE LF +NP W + + NFFE V Y +
Sbjct: 279 KELIDRFTKYLANKRAHAMGLELLFPEIGLKNPISWFDSFSSFNEQKTNFFEGNVVNYSK 338
Query: 119 GAELKWD 125
G+ D
Sbjct: 339 GSLNLDD 345
>gi|167462363|ref|ZP_02327452.1| ribonucleoside-diphosphate reductase beta subunit [Paenibacillus
larvae subsp. larvae BRL-230010]
Length = 343
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H+ + ++ ENP L +E + R +A LEIA++ + F G+
Sbjct: 215 RDEEIHVRLFTQIFRELIAENPELDNEETHEFVRQTFRKAAELEIAWSEYIIGDRFDGVT 274
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEV-IDLKKEKNFFETRVTEYQQG 119
+ ++Y++F+AN+R +++G+E F+ + N W+ + + +FFE+RVT+Y +
Sbjct: 275 SRDLDKYVRFMANKRVNELGIERPFEGHRRNNLRWIKAYEENDAGKTDFFESRVTQYVKV 334
Query: 120 A 120
+
Sbjct: 335 S 335
>gi|302379704|ref|ZP_07268189.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
magna ACS-171-V-Col3]
gi|302312611|gb|EFK94607.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
magna ACS-171-V-Col3]
Length = 347
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I +K E P L+T+E + + M+ + EI +A + + GL+
Sbjct: 219 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWAKYVIGEKIQGLS 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117
E Y++++ N R +G ++ E W+SE D K + +FFE + + Y
Sbjct: 279 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 338
Query: 118 QGAELKWD 125
+ A ++ D
Sbjct: 339 KSAIIEDD 346
>gi|303234233|ref|ZP_07320879.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
magna BVS033A4]
gi|302494774|gb|EFL54534.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
magna BVS033A4]
Length = 347
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I +K E P L+T+E + + M+ + EI +A + + GL+
Sbjct: 219 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWAKYVIGEKIQGLS 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117
E Y++++ N R +G ++ E W+SE D K + +FFE + + Y
Sbjct: 279 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 338
Query: 118 QGAELKWD 125
+ A ++ D
Sbjct: 339 KSAIIEDD 346
>gi|160947324|ref|ZP_02094491.1| hypothetical protein PEPMIC_01258 [Parvimonas micra ATCC 33270]
gi|158446458|gb|EDP23453.1| hypothetical protein PEPMIC_01258 [Parvimonas micra ATCC 33270]
Length = 349
Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++ +++ E P L+T+E + M+ EIA+ + + GL
Sbjct: 218 RDENTHLWLFKKMLLELQNEEPELFTEEKVAVYKDMIKTGVEQEIAWGKYVLGENIPGLT 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-EKNFFETRVTEYQ 117
E Y++++ N R + L+ Y E P W+SE D + +FFE + + Y
Sbjct: 278 IQMVEDYIKYLGNLRSTALNFGKLYDGYDEEPESMKWVSEYSDPNAIKTDFFEAKPSAYS 337
Query: 118 QGAELKWD 125
+ + + D
Sbjct: 338 KSSVIDDD 345
>gi|297587320|ref|ZP_06945965.1| ribonucleotide-diphosphate reductase beta subunit [Finegoldia magna
ATCC 53516]
gi|297575301|gb|EFH94020.1| ribonucleotide-diphosphate reductase beta subunit [Finegoldia magna
ATCC 53516]
Length = 354
Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I +K E P L+T+E + + M+ + + EI +A + + GL+
Sbjct: 226 RDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGSEAEIEWAKYVIGEKIQGLS 285
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117
E Y++++ N R +G ++ E W+SE D K + +FFE + + Y
Sbjct: 286 IKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIKTDFFEAKPSAYS 345
Query: 118 QGAELKWD 125
+ A ++ D
Sbjct: 346 KSAIIEDD 353
>gi|73974200|ref|XP_858061.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
inducible) isoform 3 [Canis familiaris]
Length = 338
Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 22/121 (18%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K +++ R ++ A +E + E +P G +G+N
Sbjct: 226 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++F+ ENPF +M E I L+ + NFFE RV EYQ+ A
Sbjct: 279 CVLMKQYIEFVFQ--------------AENPFDFM-ENISLEGKTNFFEKRVAEYQRFAV 323
Query: 122 L 122
+
Sbjct: 324 M 324
>gi|50288235|ref|XP_446546.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525854|emb|CAG59473.1| unnamed protein product [Candida glabrata]
Length = 335
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RD + +F + HL TK + ++ EA +E A+ +MP +G++
Sbjct: 202 RDRGFYADFACLLF-------AHLKTKPNPKIIEQIITEAVEIEKAHYRNSMPIEKLGMD 254
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+QY++ +A++ G E + NPFP+M E + + NFFE +V++YQ+ +
Sbjct: 255 LKEIDQYIESVADKLLVSFGNEKFYN-ATNPFPFMEEATSI-GKTNFFEKKVSDYQKASA 312
Query: 122 LK 123
Sbjct: 313 TS 314
>gi|13358428|ref|NP_078636.1| Ribonucleotide reductase small subunit [Lymphocystis disease virus
1]
Length = 378
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK--GFV 58
+RDE++H+ + E + T+EF R + E LE +
Sbjct: 251 IRDENIHVEGLCKLFKTFISEYSFILTEEFFSAVRKIQAEVLQLETDFIILLFTNITEIK 310
Query: 59 GLNAPSCEQYMQFIANRRCHQIGL-EPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
GL Y+++I RR Q+GL E NP W+S +I + NFFE RVTEY
Sbjct: 311 GLTKLCMINYVKYILQRRTEQLGLLESTEVLLTNPIDWISWLIAGRNITNFFENRVTEYD 370
Query: 118 QGA-ELKW 124
+ E W
Sbjct: 371 ICSLEGDW 378
>gi|293401949|ref|ZP_06646089.1| ribonucleoside-diphosphate reductase, beta subunit
[Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304607|gb|EFE45856.1| ribonucleoside-diphosphate reductase, beta subunit
[Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 347
Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL +I +++ E P L+T ++ + ML EI + + GL
Sbjct: 219 RDENTHLWLFRSMILELQKEEPQLFTPALVEEYKDMLRYGVEEEIRWGSYVIGNDIEGLT 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-EKNFFETRVTEYQ 117
+Y+ ++ N R +G L++ E W+S + + +FFE R + Y
Sbjct: 279 MQMVREYIYYLGNLRSTSLGFGTLYEGYEKEPASMEWVSMYANANLIKTDFFEARSSAYA 338
Query: 118 QGAELKWD 125
+ + L D
Sbjct: 339 KSSALVDD 346
>gi|328722535|ref|XP_001944897.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Acyrthosiphon pisum]
Length = 345
Score = 94.6 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K ++ +A +E + + VG++
Sbjct: 232 RDEGLHTDFACLLFK-------HLDQKPPLTVITHIICKAVTIEQYFLTNALLVKMVGMS 284
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 113
+Y++F+A+R +++G ++ + NPFP+M ++ + + N FE RV
Sbjct: 285 CEKMAEYIEFVADRLLNELGCPAVY-RSSNPFPFMD-LLSQQGKTNGFEKRV 334
>gi|194319980|pdb|2VUX|A Chain A, Human Ribonucleotide Reductase, Subunit M2 B
gi|194319981|pdb|2VUX|B Chain B, Human Ribonucleotide Reductase, Subunit M2 B
Length = 326
Score = 94.6 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + +L K +++ R ++ +A +E + E +P G +G+N
Sbjct: 230 RDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 282
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
+QY++F+A+R ++G +F ENPF +M E I L+ + N
Sbjct: 283 CILMKQYIEFVADRLLVELGFSKVF-QAENPFDFM-ENISLEGKTN 326
>gi|228861279|ref|YP_002854302.1| ribonucleotide reductase small subunit [Soft-shelled turtle
iridovirus]
gi|45550045|gb|AAS67856.1| ribonucleotide reductase small subunit [Rana grylio virus 9506]
gi|194307559|gb|ACF42289.1| ribonucleotide reductase small subunit [Soft-shelled turtle
iridovirus]
Length = 387
Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 5/129 (3%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58
+RDE++H+ + + E P + TK+ + + LE A+ +
Sbjct: 252 VRDENIHVEGVSKLFETLNSEYPWVVTKDLIELFKEDAERVAELEEAFVDLAFQECGPVC 311
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE--NPFPWMSEVIDLKKEKNFFETRVTEY 116
GL + Y+ ++ N R +GL L + P PW+ +ID NFFE VTEY
Sbjct: 312 GLEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDGADLTNFFENHVTEY 371
Query: 117 QQGA-ELKW 124
+ G W
Sbjct: 372 ETGGLTGSW 380
>gi|113200701|ref|YP_717864.1| ribonucleotide reductase subunit B [Synechococcus phage syn9]
gi|76574600|gb|ABA47165.1| ribonucleotide reductase subunit B [Synechococcus phage syn9]
Length = 387
Score = 94.2 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 2 RDESLHLNFGIDVINQIKI-ENPHLWTKEFQQKS--RTMLHEATLLEIAYAHETMPK-GF 57
RDE+ HL +++N+ + ++P + +++ M E +A
Sbjct: 247 RDENQHLVITQNILNKWREGDDPEMAIIAKEEEVNVVDMFKRTVNEEKRWADYLFKDGSM 306
Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN Y+++IANRR IGL+P++ NP PW ++ K ++N ET +
Sbjct: 307 IGLNDRLLHNYVEWIANRRMKAIGLKPIYDIPAKNNPLPWTEHWLNSKGQQNAPQETEIE 366
Query: 115 EYQQGAELKW 124
Y G +
Sbjct: 367 SYVVGGIKQD 376
>gi|326783148|ref|YP_004323545.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM2]
gi|310005566|gb|ADO99954.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM2]
Length = 394
Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 7/130 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQK---SRTMLHEATLLEIAYAHETMPK-GF 57
RDES HL +I + + + + +++ M A E A+A
Sbjct: 254 RDESQHLVLTQQIIKKWQDGDDEEMVRIAEEEKPNVLKMFQNAVEEEKAWAQYLFKNGSM 313
Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY++F ANRR IGL+P++ NP PW ++ K ++N ET +
Sbjct: 314 IGLNEKLLGQYVEFTANRRMKAIGLDPIYDISPRNNPLPWTQYWLNSKGQQNAPQETEIE 373
Query: 115 EYQQGAELKW 124
Y G +
Sbjct: 374 SYVIGGIKQD 383
>gi|56418235|gb|AAV91049.1| ribonucleotide reductase beta subunit [Grouper iridovirus]
Length = 384
Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF--V 58
+RDE++H+ + + E P L T++ + + A LE A+
Sbjct: 253 VRDENIHVEGVSRLFETLCAEYPWLMTEKLVRDCKKDAERAAELEFAFIDLAFSYCPALD 312
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPWMSEVIDLKKEKNFFETRVTEY 116
GL S + Y+ ++ N R +GL L +ENP PW+ +I+ NFFE VTEY
Sbjct: 313 GLTPSSVKNYVLYVINLRASHMGLPKLMASAPSENPLPWVKWLIEGADLTNFFENHVTEY 372
Query: 117 QQGA-ELKW 124
+ G W
Sbjct: 373 ETGGLTGSW 381
>gi|49237365|ref|YP_031646.1| ribonucleoside diphosphate reductase beta subunit-like protein
[Frog virus 3]
gi|47060183|gb|AAT09727.1| ribonucleoside diphosphate reductase beta subunit-like protein
[Frog virus 3]
Length = 387
Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 5/129 (3%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58
+RDE++H+ + + E P + TK+ + + LE A+ +
Sbjct: 252 VRDENIHVEGVSKLFETLNSEYPWVVTKDLIELFKEDAERVAELEEAFVDLAFQECGPVC 311
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE--NPFPWMSEVIDLKKEKNFFETRVTEY 116
GL + Y+ ++ N R +GL L + P PW+ +ID NFFE VTEY
Sbjct: 312 GLEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDGADLTNFFENHVTEY 371
Query: 117 QQGA-ELKW 124
+ G W
Sbjct: 372 ETGGLTGSW 380
>gi|56692684|ref|YP_164142.1| ribonucleoside-diphosphate reductase beta subunit [Singapore
grouper iridovirus]
gi|42517396|gb|AAS18062.1| ribonucleoside-diphosphate reductase beta subunit [Singapore
grouper iridovirus]
Length = 384
Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF--V 58
+RDE++H+ + + E P L T++ + + A LE A+
Sbjct: 253 VRDENIHVEGVSRLFETLCAEYPWLMTEKLVRDCKKDAERAAELEFAFIDLAFSYCPALD 312
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPWMSEVIDLKKEKNFFETRVTEY 116
GL S + Y+ ++ N R +GL L +ENP PW+ +I+ NFFE VTEY
Sbjct: 313 GLTPSSVKNYVLYVINLRASHMGLPKLMASAPSENPLPWVKWLIEGADLTNFFENHVTEY 372
Query: 117 QQGA-ELKW 124
+ G W
Sbjct: 373 ETGGLTGSW 381
>gi|239826135|ref|YP_002948759.1| ribonucleoside-diphosphate reductase [Geobacillus sp. WCH70]
gi|239806428|gb|ACS23493.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. WCH70]
Length = 346
Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H++ + ++ E P T E Q R +A LEI +A+ + G++
Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYNTPELAQFVRETFIKAAKLEIEWANYIIGNDIDGID 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118
Y++F AN R HQ+G + F Y NP W+ ++ + +FFE + +Y +
Sbjct: 278 MHDLSAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGKSDFFEQKSRQYTK 336
>gi|160915703|ref|ZP_02077911.1| hypothetical protein EUBDOL_01712 [Eubacterium dolichum DSM 3991]
gi|158432179|gb|EDP10468.1| hypothetical protein EUBDOL_01712 [Eubacterium dolichum DSM 3991]
Length = 353
Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ HL ++ ++K E P L+T E + + ML E+ +A + + GL
Sbjct: 225 RDENTHLWLFRSILLELKKEEPQLFTPEHIEIYKGMLKHGVEEEVKWAEYVLGERMEGLT 284
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLK-KEKNFFETRVTEYQ 117
Y+ ++ N R + +G L+ E W+S + + +FFE + T Y
Sbjct: 285 MEMVADYIHYLGNLRSNALGFGSLYDGYEKEPASMEWVSMYSNANIIKTDFFEAKSTAYA 344
Query: 118 QGAELKWD 125
+ + L D
Sbjct: 345 KSSALVDD 352
>gi|23100542|ref|NP_694009.1| ribonucleotide-diphosphate reductase subunit beta [Oceanobacillus
iheyensis HTE831]
gi|22778775|dbj|BAC15043.1| ribonucleoside-diphosphate reductase beta subunit [Oceanobacillus
iheyensis HTE831]
Length = 347
Score = 93.9 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++ ENP EF ++ LEI ++H + G++
Sbjct: 219 RDELEHGRFITELFRATLEENPSHNNAEFIDWIYDRFQQSVELEIEWSHYVL-NKLEGID 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDL--KKEKNFFETRVTEYQQ 118
+ Y+++ AN+ +GLE L+ + ENP W+ +D + +FFE + +Y +
Sbjct: 278 MDDMDGYIKYRANKMLRMMGLEELYPQHVENPMKWVRAYVDNFDGTKTDFFEQKSRQYTK 337
Query: 119 GAELK 123
++L
Sbjct: 338 TSDLN 342
>gi|326782198|ref|YP_004322599.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM1]
gi|310004405|gb|ADO98798.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM1]
Length = 395
Score = 93.5 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 7/130 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQK---SRTMLHEATLLEIAYAHETMPK-GF 57
RDES HL +I + + + + +++ M A E A+A
Sbjct: 255 RDESQHLVLTQQIIKKWQDGDDEEMVRIAEEEKSNVLKMFKNAVEEEKAWASYLFKNGSM 314
Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY++F ANRR IGL+P++ NP PW ++ K ++N ET +
Sbjct: 315 IGLNEKLLGQYVEFTANRRMKAIGLDPIYDISPRNNPLPWTQYWLNSKGQQNAPQETEIE 374
Query: 115 EYQQGAELKW 124
Y G +
Sbjct: 375 SYVIGGIKQD 384
>gi|326782458|ref|YP_004322858.1| ribonucleotide reductase A subunit [Synechococcus phage S-ShM2]
gi|310003406|gb|ADO97803.1| ribonucleotide reductase A subunit [Synechococcus phage S-ShM2]
Length = 386
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 2 RDESLHLNFGIDVINQIKI-ENPHLWTKEFQQK--SRTMLHEATLLEIAYAHETMPK-GF 57
RDES HL +++ + ++P + +++ M + E A+A
Sbjct: 246 RDESQHLVITQNILKNWRDGDDPEMQQIALEEEENVIKMFAKTVDEEKAWAEYLFKDGSM 305
Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++IANRR IGL+P++ NP PW ++ K ++N ET +
Sbjct: 306 IGLNDRLLSQYVEWIANRRMKAIGLKPMYNVPAKSNPLPWTEHWLNSKGQQNAPQETEIE 365
Query: 115 EYQQGAELKW 124
Y G +
Sbjct: 366 SYVIGGIKQD 375
>gi|319655055|ref|ZP_08009124.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
2_A_57_CT2]
gi|317393250|gb|EFV74019.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
2_A_57_CT2]
Length = 345
Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H++ + + +I ENP L T E + + A LEI +A + + G+
Sbjct: 217 RDEQIHVDLFVKIFKEILQENPELNTNELSKFVQETFKRAAELEIEWARDVIGSKTEGIL 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118
E Y++F AN RC+Q+G E F+ Y NP W+ + + +FFE + +Y +
Sbjct: 277 LSDVEAYIKFYANIRCNQLGYERPFEGYRTNPLRWIVAYEQVDHGKSDFFEQKSRQYTK 335
>gi|61806369|ref|YP_214728.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM4]
gi|61563913|gb|AAX46968.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM4]
Length = 387
Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 2 RDESLHLNFGIDVINQI-KIENPHLWTKEFQQK--SRTMLHEATLLEIAYAHETM-PKGF 57
RDES HL ++ + ++P + ++K + M E A+A
Sbjct: 247 RDESQHLVITQQILKKWADGDDPEMQEIAKEEKSFVKDMFRNTVNEEKAWADYLFKEGSM 306
Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLNA Y+++IANRR IGL+P++ NP PW ++ K ++N ET +
Sbjct: 307 IGLNARLLNNYVEWIANRRMKAIGLDPIYDQPLRNNPLPWTEHWLNSKGQQNAPQETEIE 366
Query: 115 EYQQGAELKW 124
Y G +
Sbjct: 367 SYVIGGIKQD 376
>gi|89097912|ref|ZP_01170799.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
NRRL B-14911]
gi|89087414|gb|EAR66528.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
NRRL B-14911]
Length = 353
Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH++ + + +I E P TKE + + + EA LEI +A + G+
Sbjct: 224 RDEQLHVDLFVKIFREILDEYPEQNTKELAEFAESTFREAAYLEIEWARSIIGDKISGIL 283
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
E+Y++F AN R +Q+G F+ + NP W+ ++ + +FFE + +Y +
Sbjct: 284 IGDVEEYIRFYANVRSNQLGFNRPFEGSRTNPLRWIKAYEEVDLGKSDFFEQKPRQYVKV 343
Query: 120 AELK 123
+
Sbjct: 344 NTVD 347
>gi|157325080|ref|YP_001468505.1| gp125 [Listeria phage A511]
gi|66732769|gb|AAY53360.1| gp57 [Listeria phage P100]
gi|66733088|gb|AAY52906.1| gp125 [Listeria phage A511]
Length = 343
Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++I I ENP L T E A LE A++ E + G++
Sbjct: 215 RDELAHSKFISELIRAIVGENPELQTDELNDYVYASFRHAVELEQAWSSEVLQG-IEGID 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
Y+++ AN+ +GL+P++ +TEN W+ D + + +FFE R + Y++
Sbjct: 274 VEEMLDYVKYRANKMLGMLGLQPMYQGHTENSMTWIKAYADNFTETKTDFFEMRNSSYKK 333
>gi|331035505|gb|AEC53062.1| ribonucleotide reductase subunit B [Synechococcus phage S-CRM01]
Length = 381
Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKS---RTMLHEATLLEIAYAHETMP-KGF 57
RDE+ HL ++IN + + K + ++ ++ A E A+A
Sbjct: 241 RDENQHLFLTQNIINNWRNNDDPEMKKIYNEEIDHTTSLFEAAVDQEKAWAQYLFKTGSM 300
Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GL+ Y+++IANRR IG++P++ NP PWM + K +N ET +
Sbjct: 301 IGLSEKLLCNYVEWIANRRMKAIGIKPIYEIPANSNPLPWMDHWLKSKGVQNAPQETEIE 360
Query: 115 EYQQGA 120
Y G
Sbjct: 361 SYIVGG 366
>gi|257453171|ref|ZP_05618470.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
3_1_5R]
gi|317059706|ref|ZP_07924191.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
sp. 3_1_5R]
gi|313685382|gb|EFS22217.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
sp. 3_1_5R]
Length = 344
Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ +I +IK ENP+ + + ++ R M A EI + + +G+
Sbjct: 216 RDELSHVVLFQKIIREIKAENPNFFQE---EEIRMMFQTAVEQEILWTEHIIGNRVLGIT 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ E Y +++AN R IGL P++ +T+NP+ + D + + NFFE VT Y
Sbjct: 273 TETTEAYTKWLANERLRTIGLAPMYDGFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSY 332
Query: 117 QQGAELK-WD 125
+ + WD
Sbjct: 333 NMSSSIDGWD 342
>gi|225734460|gb|ACO25228.1| hypothetical protein [Epizootic haematopoietic necrosis virus]
Length = 387
Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 5/129 (3%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58
+RDE++H+ + + E P + ++ + + LE A+ +
Sbjct: 252 VRDENMHVEGVSKLFETLNSEYPWVVNEDLIELFKEDAERVAELEEAFVDLAFQECGPVC 311
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE--NPFPWMSEVIDLKKEKNFFETRVTEY 116
GL + Y+ ++ N R +GL L + P PW+ +ID NFFE VTEY
Sbjct: 312 GLEPKQVKDYVLYVINLRASNMGLPRLIERAPEACPIPWVKWLIDGADLTNFFENHVTEY 371
Query: 117 QQGA-ELKW 124
+ G W
Sbjct: 372 ETGGLTGSW 380
>gi|257467364|ref|ZP_05631675.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
gonidiaformans ATCC 25563]
gi|315918494|ref|ZP_07914734.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
gonidiaformans ATCC 25563]
gi|313692369|gb|EFS29204.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
gonidiaformans ATCC 25563]
Length = 344
Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ +I +IK ENP +++ R M A EI + + +G+
Sbjct: 216 RDELSHVVLFQKIIREIKAENP---NFFQEEEIRMMFQTAVEQEILWTEHIIGNRVLGIT 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ E Y +++AN R IGL P++ +T+NP+ + D + + NFFE VT Y
Sbjct: 273 TETTEAYTKWLANERLRTIGLAPMYDGFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSY 332
Query: 117 QQGAELK-WD 125
+ + WD
Sbjct: 333 NMSSSIDGWD 342
>gi|488081|gb|AAA56996.1| ribonucleoside-diphosphate reductase small subunit [Drosophila
melanogaster]
Length = 214
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + +++ ++ +A +E + + +P +G+N
Sbjct: 120 RDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMN 172
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 105
QY++F+A+R ++G+ ++ T+NPF +M E+I L +
Sbjct: 173 CDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGK 214
>gi|9629745|ref|NP_045237.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 4]
gi|2605963|gb|AAC59535.1| 20 [Equid herpesvirus 4]
Length = 320
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H N + N K + + EA +E + PK L+
Sbjct: 202 RDEAIHTNASCCIYNNYLGGF----EKPAPTRIYALFSEAVNIECEFLLSHAPKSTHLLD 257
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ Y+++ A+R +IGL PLF + P + + ++K NFFE R T Y
Sbjct: 258 IEAIICYVRYSADRLLGEIGLSPLFNAPKPPPSFPLAFMTVEKHTNFFERRSTAYS 313
>gi|1710396|sp|P50644|RIR2_EHV4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|515833|emb|CAA53101.1| ribonucleoside-diphosphate reductase [Equid herpesvirus 4]
Length = 320
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H N + N K + + EA +E + PK L+
Sbjct: 202 RDEAIHTNASCCIYNNYLGGF----EKPAPTRIYALFSEAVNIECEFLLSHAPKSSHLLD 257
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ Y+++ A+R +IGL PLF + P + + ++K NFFE R T Y
Sbjct: 258 IEAIICYVRYSADRLLGEIGLSPLFNAPKPPPSFPLAFMTVEKHTNFFERRSTAYS 313
>gi|297530897|ref|YP_003672172.1| ribonucleotide reductase [Geobacillus sp. C56-T3]
gi|297254149|gb|ADI27595.1| ribonucleotide reductase [Geobacillus sp. C56-T3]
Length = 346
Score = 91.9 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H++ + ++ E P T E R +A LEI +A E + G++
Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYRTPELSDFVRETFTKAAELEIEWAGEIIGNDIDGID 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118
E Y++F AN R HQ+G + F Y NP W+ ++ + +FFE + +Y +
Sbjct: 278 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGKSDFFEQKPRQYTK 336
>gi|167461830|ref|ZP_02326919.1| ribonucleoside-diphosphate reductase beta subunit [Paenibacillus
larvae subsp. larvae BRL-230010]
gi|322383591|ref|ZP_08057349.1| ribonucleotide-diphosphate reductase subunit beta-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321152059|gb|EFX44995.1| ribonucleotide-diphosphate reductase subunit beta-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 343
Score = 91.9 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ H F +V + + P L T E Q + +A LE +AH + G++
Sbjct: 215 RDEAQHAYFFGEVFKLLLTDFPELNTSERIQYVYDTIDQAVKLEEKWAHYVL-NQIDGID 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID---LKKEKNFFETRVTEYQQ 118
+Y++FIAN+R +GL+P ++ +N PW+ D + + +FFE + Y +
Sbjct: 274 LDDFSRYIRFIANKRLKTMGLQPAYEGVDNCMPWIRPFSDEALNQTKTDFFEAKSRTYAK 333
Query: 119 GA 120
+
Sbjct: 334 VS 335
>gi|56419447|ref|YP_146765.1| ribonucleoside-diphosphate reductase subunit beta [Geobacillus
kaustophilus HTA426]
gi|56379289|dbj|BAD75197.1| ribonucleoside-diphosphate reductase beta subunit [Geobacillus
kaustophilus HTA426]
Length = 346
Score = 91.9 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H++ + ++ E P T E R +A LEI +A E + G++
Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYRTPELADFVRNTFMKAAELEIEWAREIIGNDIDGID 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118
E Y++F AN R HQ+G + F Y NP W+ ++ + +FFE + +Y +
Sbjct: 278 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGKSDFFEQKPRQYTK 336
>gi|326784480|ref|YP_004325029.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM7]
gi|310004513|gb|ADO98905.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM7]
Length = 388
Score = 91.9 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 8/131 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDES HL ++ ++P + +E Q+ M E A+A+
Sbjct: 247 RDESQHLVLTQQILKNWTEGKDDPEMKEIAEEEQETVEQMFKACVDEEKAWANYLFKEGS 306
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRV 113
+GLN Y+++IANRR IGL+P++ NP PW ++ K ++N ET +
Sbjct: 307 MIGLNERLLHNYVEWIANRRMKAIGLKPIYDQPLRNNPLPWTEHWLNSKGQQNAPQETEI 366
Query: 114 TEYQQGAELKW 124
Y G +
Sbjct: 367 ESYVVGGIKQD 377
>gi|295401051|ref|ZP_06811025.1| Ribonucleoside-diphosphate reductase [Geobacillus
thermoglucosidasius C56-YS93]
gi|312112173|ref|YP_003990489.1| ribonucleotide reductase [Geobacillus sp. Y4.1MC1]
gi|294976844|gb|EFG52448.1| Ribonucleoside-diphosphate reductase [Geobacillus
thermoglucosidasius C56-YS93]
gi|311217274|gb|ADP75878.1| ribonucleotide reductase [Geobacillus sp. Y4.1MC1]
Length = 346
Score = 91.9 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H++ + ++ E P T E + + +A LEI +A+ + G++
Sbjct: 218 RDEHIHVDLFAKIFKEVLSEYPEYNTPELAEFVQATFTKAAELEIEWANYIIGNDIDGID 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118
Y++F AN R HQ+G E F Y NP W+ ++ + +FFE + +Y +
Sbjct: 278 MHDLSAYIKFYANVRAHQLGFERPFAGYRTNPLRWIKAYEEVDLGKSDFFEQKSRQYTK 336
>gi|261419130|ref|YP_003252812.1| ribonucleoside-diphosphate reductase [Geobacillus sp. Y412MC61]
gi|319765947|ref|YP_004131448.1| ribonucleotide reductase [Geobacillus sp. Y412MC52]
gi|261375587|gb|ACX78330.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. Y412MC61]
gi|317110813|gb|ADU93305.1| ribonucleotide reductase [Geobacillus sp. Y412MC52]
Length = 346
Score = 91.9 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H++ + ++ E P T E R +A LEI +A E + G++
Sbjct: 218 RDEHIHVDLFAKIFKEVLNEYPEYRTPELSDFVRETFTKAAELEIEWAGEIIGNDIDGID 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118
E Y++F AN R HQ+G + F Y NP W+ ++ + +FFE + +Y +
Sbjct: 278 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGKSDFFEQKPRQYTK 336
>gi|45686047|ref|YP_003810.1| unknown [Ambystoma tigrinum virus]
gi|37722471|gb|AAP33216.1| unknown [Ambystoma tigrinum stebbensi virus]
Length = 387
Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 5/129 (3%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58
+RDE++H+ + + E P + T++ + + LE A+ +
Sbjct: 252 VRDENIHVEGVSKLFETLNSEYPWVVTEDLIELFKEDAERVAELEEAFVDLAFQECGPVC 311
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE--NPFPWMSEVIDLKKEKNFFETRVTEY 116
GL + Y+ ++ N R +GL L + P PW+ +ID NFFE VTEY
Sbjct: 312 GLEPKQVKDYVLYVINLRASNMGLPRLIERAPEACPIPWVKWLIDGADLTNFFENHVTEY 371
Query: 117 QQGA-ELKW 124
+ G W
Sbjct: 372 ETGGLTGSW 380
>gi|61806080|ref|YP_214440.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM2]
gi|61374589|gb|AAX44586.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM2]
gi|265525292|gb|ACY76089.1| NrdB [Prochlorococcus phage P-SSM2]
Length = 384
Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 2 RDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-GF 57
RDE+ HL +++N + ++P + KE +Q + M + E +A
Sbjct: 244 RDENQHLAITQNILNNWRKGDDPEMVEIMKEEEQWTYQMFEKCVNEEKMWAEYLFKDGSM 303
Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY++++ANRR IG++P++ NP PW I K + ET V
Sbjct: 304 IGLNDKLLHQYVEWVANRRMRSIGMKPVYDIAAKNNPLPWTEHWISSKGLQVAPQETEVE 363
Query: 115 EYQQGAELKW 124
Y G +
Sbjct: 364 SYIVGGIKQD 373
>gi|326782536|ref|YP_004323092.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM1]
gi|310002750|gb|ADO97149.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM1]
Length = 386
Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Query: 2 RDESLHLNFGIDVINQIKI-ENPHLWTKEFQQK--SRTMLHEATLLEIAYAHETM-PKGF 57
RDES HL +++ + K ++P + +++ M E +A
Sbjct: 246 RDESQHLVITQNILRKWKEGDDPEMAVIAKEEQPFVAEMFKRTVNEEKMWADYLFKQGSM 305
Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN Y+++IANRR IGL+P+F NP PW ++ K ++N ET +
Sbjct: 306 IGLNDRLLHNYVEWIANRRMKAIGLDPIFDVPAKNNPLPWTEHWLNSKGQQNAPQETEIE 365
Query: 115 EYQQGAELKW 124
Y G +
Sbjct: 366 SYVVGGIKQD 375
>gi|326781924|ref|YP_004322326.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM2]
gi|310003114|gb|ADO97512.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM2]
Length = 397
Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 2 RDESLHLNFGIDVINQI-KIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-GF 57
RDE+ HL +++N+ + ++P + KE ++ + A E +A
Sbjct: 257 RDENQHLAITQNILNKWAQGDDPEMKQIMKEEEEWTYKAFDNAVNEEKRWADYLFKDGSM 316
Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN +QY++++ANRR IGL+P + + NP PW I K + ET V
Sbjct: 317 IGLNDKLLQQYVEWVANRRLKAIGLKPQYDIAASANPLPWTQHWISSKGLQVAPQETEVE 376
Query: 115 EYQQGAELKW 124
Y G +
Sbjct: 377 SYVVGGIKQD 386
>gi|18656506|gb|AAL77807.1|AF389451_14 ribonucleoside-diphosphate reductase beta subunit [Tiger frog
virus]
Length = 387
Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 5/129 (3%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-- 58
+RDE++H+ + + E P + TK+ + + LE A+ +
Sbjct: 252 VRDENIHVEGVSKLFETLNSEYPWVVTKDIIELFKEDAERVAELEEAFVDLAFQECGPVC 311
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE--NPFPWMSEVIDLKKEKNFFETRVTEY 116
L + Y+ ++ N R +GL L + P PW+ +ID NFFE VTEY
Sbjct: 312 ELEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDGADLTNFFENHVTEY 371
Query: 117 QQGA-ELKW 124
+ G W
Sbjct: 372 ETGGLTGSW 380
>gi|310830452|ref|YP_003965553.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
polymyxa SC2]
gi|309249919|gb|ADO59485.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
polymyxa SC2]
Length = 342
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ H F ++ Q+ I+ P L T++ + + EA E +A + G G++
Sbjct: 214 RDENQHCYFFAELYKQLLIDFPQLNTEQNKTFVYNFMDEAVRHETEWAEYVL-DGIEGID 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID---LKKEKNFFETRVTEYQQ 118
Y++ IAN R +GL ++ N PW+ D + FE + Y +
Sbjct: 273 LDEFRGYIRHIANNRLRLMGLPAAYEGVSNTMPWIRPFSDEALNDTLTDQFEAKPRTYTK 332
Query: 119 GAE-LKWD 125
++ WD
Sbjct: 333 ASQDNDWD 340
>gi|326783875|ref|YP_004324269.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM7]
gi|310003887|gb|ADO98282.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM7]
Length = 388
Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 7/130 (5%)
Query: 2 RDESLHLNFGIDVINQIKI-ENPHLWTKEFQQK--SRTMLHEATLLEIAYAHETM-PKGF 57
RDE+ HL +++ ++P + +++ M A E +A
Sbjct: 248 RDENQHLVLTQNILKNWMNGDDPEMKQIADEERNNVIGMFRNAVEEEKEWAEYLFSGGSM 307
Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++IAN+R +G +P++ NP PW I K + ET V
Sbjct: 308 IGLNDKLLNQYVEWIANKRMKALGFDPIYDQPLRNNPLPWTQHWISSKGLQVAPQETEVE 367
Query: 115 EYQQGAELKW 124
Y G +
Sbjct: 368 SYVVGGIKQD 377
>gi|254523600|ref|ZP_05135655.1| ribonucleoside-diphosphate reductase, beta subunit
[Stenotrophomonas sp. SKA14]
gi|219721191|gb|EED39716.1| ribonucleoside-diphosphate reductase, beta subunit
[Stenotrophomonas sp. SKA14]
Length = 346
Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++I I ENP L T E A LE ++ E + G G++
Sbjct: 218 RDELAHTKFISELIRAIIGENPELQTNELTAYVHQAFEHAIELETQWSSEVL-DGIDGID 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
+Y+++ AN+ +G+E L+ T+N PW+ D + + +FFE R Y++
Sbjct: 277 VEEMTRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336
>gi|294501621|ref|YP_003565321.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
megaterium QM B1551]
gi|295706969|ref|YP_003600044.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
megaterium DSM 319]
gi|294351558|gb|ADE71887.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
megaterium QM B1551]
gi|294804628|gb|ADF41694.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
megaterium DSM 319]
Length = 347
Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH+ + ++ ENP T+E + EA LEI +A + + F G+
Sbjct: 217 RDEQLHVGLFEKIFKEVLNENPAYRTEELETFVVETFQEAARLEIEWAESVIGEKFDGIT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEP---LFKYTENPFPWMSEVIDLK-KEKNFFETRVTEYQ 117
+QY++++AN+RC+Q+G ENP W+ ++ + +FFE + +Y
Sbjct: 277 MKELQQYIEYMANKRCNQLGFGRAAFPEAPIENPLRWIIAYQEVDLGKTDFFEQKSRQYT 336
Query: 118 QGAELK 123
+ ++
Sbjct: 337 KASDAN 342
>gi|237738278|ref|ZP_04568759.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
mortiferum ATCC 9817]
gi|229420158|gb|EEO35205.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
mortiferum ATCC 9817]
Length = 348
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ +I +++ ENP+ + + M +A EI++ + + +G+
Sbjct: 220 RDELSHVVIFQQMIKEVQNENPNFFDENI---IYEMFEKAVEQEISWTNHIIGGNILGIT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ E Y +++AN R IGL+PL++ Y +NP+ + D + + NFFE VT Y
Sbjct: 277 EKTTESYTKWLANERLKSIGLQPLYEGYEKNPYKHLERFADTEGEGNVKANFFEGTVTSY 336
Query: 117 QQGAELK-WD 125
+ ++ WD
Sbjct: 337 NMSSSVEGWD 346
>gi|285016983|ref|YP_003374694.1| ribonucleotide-diphosphate reductase beta subunit protein
[Xanthomonas albilineans GPE PC73]
gi|283472201|emb|CBA14708.1| probable ribonucleotide-diphosphate reductase beta subunit protein
[Xanthomonas albilineans]
Length = 346
Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++I I EN L T E A LE ++ E + G G++
Sbjct: 218 RDELAHTKFISELIRAIIGENAELQTNELTDYVHQAFEHAIRLETEWSSEVL-DGIEGID 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
QY+++ AN+ +G+E L+ ++N PW+ D + + +FFE R Y++
Sbjct: 277 VDEMIQYVKYRANKMSGMLGIEKLYTGASDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336
>gi|170587050|ref|XP_001898292.1| ribonucleotide reductase 2 [Brugia malayi]
gi|158594687|gb|EDP33271.1| ribonucleotide reductase 2, putative [Brugia malayi]
Length = 288
Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQ-------------QKSRTMLHEATLLEIAYAH 50
E++H +I+ + ++F +K +M + + Y
Sbjct: 145 ENIHSEMYSKMIDTYIRDQKQKKFRKFCVTLCFLEINLSNYKKFTSMFNACIDAKQEYLT 204
Query: 51 ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFE 110
E +P +G+N QY++++A+ ++ ++ +++NPF +M I ++ + NFFE
Sbjct: 205 EALPVDLIGINCKLMCQYIEYVADHLLTELHCAKIY-HSDNPFDFMER-ISIEAKTNFFE 262
Query: 111 TRVTEYQQGAELK 123
RV+EYQ+ L
Sbjct: 263 KRVSEYQKAGVLS 275
>gi|310639978|ref|YP_003944736.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
polymyxa SC2]
gi|309244928|gb|ADO54495.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
polymyxa SC2]
Length = 343
Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ H F +V Q+ + P L TKE M++ A LE +AH T+ K G++
Sbjct: 214 RDENQHCYFFAEVFKQLLADFPELNTKENMDYVYRMINRAVELETNWAHYTL-KEVRGID 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID---LKKEKNFFETRVTEYQ 117
Y++++AN R +G++ ++ + N PW+ D + +FFE + Y
Sbjct: 273 LNELSDYIKYMANMRLRLLGMDKAYEGVDINSMPWIKPFSDEALNATKTDFFEAKSRNYG 332
Query: 118 QGA 120
+
Sbjct: 333 KVG 335
>gi|216905873|ref|YP_002333501.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 9]
gi|216410027|dbj|BAH02445.1| small subunit of ribonucleotide reductase [Equid herpesvirus 9]
Length = 321
Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N K ++ + EA +E + P+ L+
Sbjct: 203 RDEAIHTRASCCIYNNYLGGF----EKPEPKRIYELFSEAVNIECEFLLSHAPQNSHLLD 258
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
Y+++ A+R +IGL PLF + + + ++K NFFE R T Y
Sbjct: 259 IGEIISYVRYSADRLLGEIGLSPLFNAPKPSTSFPLAFMTVEKHTNFFERRSTAYS 314
>gi|315304277|ref|ZP_07874626.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
ivanovii FSL F6-596]
gi|313627356|gb|EFR96140.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
ivanovii FSL F6-596]
Length = 349
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F +VI I ENP L T E + + A LE ++ E M G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTDELVEYTHEAFRHAVELETEWSEEVMQG-IEGID 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
Y+++ AN+ +G+ L+ ++EN W+ D + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSENTMTWIKAYADNFTETKTDFFEMRNSSYKK 339
>gi|308067265|ref|YP_003868870.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
reductase small subunit) [Paenibacillus polymyxa E681]
gi|305856544|gb|ADM68332.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
reductase small subunit) [Paenibacillus polymyxa E681]
Length = 343
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ H F +V Q+ + P L TKE M++ A LE +AH T+ K G++
Sbjct: 214 RDENQHCYFFAEVFKQLLSDFPELNTKENTDYVYRMINRAVELETNWAHYTL-KEVRGID 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID---LKKEKNFFETRVTEYQ 117
Y++++AN R +G++ ++ + N PW+ D + +FFE + Y
Sbjct: 273 LNELSDYIKYMANMRLRLLGMDKAYEGVDVNCMPWIKPFSDEALNATKTDFFEAKSRNYG 332
Query: 118 QGA 120
+
Sbjct: 333 KVG 335
>gi|297582631|ref|YP_003698411.1| ribonucleoside-diphosphate reductase [Bacillus selenitireducens
MLS10]
gi|297141088|gb|ADH97845.1| Ribonucleoside-diphosphate reductase [Bacillus selenitireducens
MLS10]
Length = 347
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F + + ++P L T+E Q + A LE +A + G++
Sbjct: 219 RDEMQHAYFMSQFVRILLTDHPELNTRENVQYVYDAMASAAGLEQEWAAVILAD-IDGID 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL---KKEKNFFETRVTEYQQ 118
Y++++ N+R Q+GL LF +NP PW+ D + + +FFE + Y +
Sbjct: 278 LGEFNGYVEYLVNKRLRQLGLSNLFPERDNPMPWIHVFSDTMMNQTKSDFFEQKSRSYTK 337
>gi|330949821|gb|EGH50081.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae Cit 7]
Length = 65
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 41/61 (67%), Positives = 47/61 (77%)
Query: 65 CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELKW 124
E Y++FIANRR QIGL+ + T NPFPWMSE++DLKKEKNFFETRV EYQ G L W
Sbjct: 5 MEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGGALSW 64
Query: 125 D 125
D
Sbjct: 65 D 65
>gi|50313261|ref|YP_053065.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 1]
gi|132625|sp|P28847|RIR2_EHV1B RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|42795147|gb|AAS45904.1| small subunit of ribonucleotide reductase [Equid herpesvirus 1]
gi|49617004|gb|AAT67277.1| ribonucleotide reductase RR2 [Equid herpesvirus 1]
Length = 321
Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 12/120 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N K ++ + EA +E + P+ L+
Sbjct: 203 RDEAIHTRASCCIYNNYLGGF----EKPEPKRIYELFSEAVNIECEFLLSHAPQYSHLLD 258
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ Y+++ A+R +IGL PLF + P +M+ ++K NFFE R T Y
Sbjct: 259 IGAIISYVRYSADRLLGEIGLSPLFNAPKPSPSFPLAFMT----VEKHTNFFERRSTAYS 314
>gi|329922162|ref|ZP_08277907.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
sp. HGF5]
gi|328942352|gb|EGG38619.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
sp. HGF5]
Length = 370
Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ H F +V Q+ + P L TKE + A LE +AH T+ G++
Sbjct: 241 RDENQHCYFFAEVFKQLLKDFPELNTKENIDYLYRTIDRAVELETNWAHYTLSN-VRGID 299
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID---LKKEKNFFETRVTEYQ 117
Y+++IANRR +GLE ++ + N PW+ D + +FFE + Y
Sbjct: 300 LNELSDYIKYIANRRITMMGLEKAYEGVDVNCMPWIKPFSDEALNATKTDFFEAKSRNYG 359
Query: 118 QGA 120
+
Sbjct: 360 KVG 362
>gi|190574752|ref|YP_001972597.1| ribonucleotide-diphosphate reductase subunit beta [Stenotrophomonas
maltophilia K279a]
gi|190012674|emb|CAQ46302.1| putative ribonucleoside-diphosphate reductase beta chain
[Stenotrophomonas maltophilia K279a]
Length = 346
Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++I I ENP L T E A LE ++ E + G G++
Sbjct: 218 RDELAHTKFISELIRAIIGENPELQTNELTAYVHQSFEHAIELETQWSSEVL-DGIDGID 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
+Y+++ AN+ +G+E L+ T+N PW+ D + + +FFE R Y++
Sbjct: 277 VDEMVRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336
>gi|138894466|ref|YP_001124919.1| ribonucleoside-diphosphate reductase subunit beta [Geobacillus
thermodenitrificans NG80-2]
gi|196247935|ref|ZP_03146637.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. G11MC16]
gi|134265979|gb|ABO66174.1| Ribonucleoside-diphosphate reductase beta subunit [Geobacillus
thermodenitrificans NG80-2]
gi|196212719|gb|EDY07476.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. G11MC16]
Length = 344
Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H++ + ++ E P T E +R+ +A LEI +A E + G++
Sbjct: 216 RDEHIHVDLFAKIFKEVLNEYPEYRTPELADFARSTFMKAAELEIEWAGEIIGNDIDGID 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK-KEKNFFETRVTEYQQ 118
E Y++F AN R HQ+G + F Y NP W+ ++ + +FFE + +Y +
Sbjct: 276 LADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGKSDFFEQKPRQYTK 334
>gi|317130866|ref|YP_004097148.1| ribonucleotide reductase [Bacillus cellulosilyticus DSM 2522]
gi|315475814|gb|ADU32417.1| ribonucleotide reductase [Bacillus cellulosilyticus DSM 2522]
Length = 345
Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ ++ ++ E P L +++ + + + LEI +A + G++
Sbjct: 217 RDEQHHVYLFANIFKELMHEYPELNSEKTHRFVQETFKKGAELEINWAKYIIGDQMEGID 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
E Y++F+AN+R +++G+E F+ Y NP W+ D+ + +FFE + +Y +
Sbjct: 277 IGDLEAYIKFMANKRVNELGVERPFEGYRNNPMRWIKIYEDVNSGKTDFFEQKSRQYTKV 336
Query: 120 A 120
+
Sbjct: 337 S 337
>gi|194366071|ref|YP_002028681.1| ribonucleotide-diphosphate reductase subunit beta [Stenotrophomonas
maltophilia R551-3]
gi|194348875|gb|ACF51998.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
R551-3]
Length = 346
Score = 90.0 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++I I ENP L T E A LE ++ E + G G++
Sbjct: 218 RDELAHTKFISELIRAIIGENPELQTNELTAYVHQSFEHAIELETQWSSEVL-DGIDGID 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
+Y+++ AN+ +G+E L+ T+N PW+ D + + +FFE R Y++
Sbjct: 277 VDEMVRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKTDFFEMRNASYKK 336
>gi|299822182|ref|ZP_07054068.1| ribonucleotide-diphosphate reductase subunit beta [Listeria grayi
DSM 20601]
gi|299815711|gb|EFI82949.1| ribonucleotide-diphosphate reductase subunit beta [Listeria grayi
DSM 20601]
Length = 349
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F +VI I ENP L T E + A LE ++ E M G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTDELVAYTHDAFRHAVELETIWSEEVMEG-IEGID 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
Y+++ AN+ +G+ L+ ++EN W+ D + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSENTMTWIKAYADNFTETKTDFFEMRNSSYKK 339
>gi|16801322|ref|NP_471590.1| ribonucleotide-diphosphate reductase subunit beta [Listeria innocua
Clip11262]
gi|16414770|emb|CAC97486.1| lin2258 [Listeria innocua Clip11262]
Length = 349
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F +VI I ENP L T+E + + A LE ++ E + G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWSEEVLQG-IEGID 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339
>gi|326783480|ref|YP_004324017.1| ribonucleotide reductase A subunit [Synechococcus phage Syn19]
gi|310004983|gb|ADO99373.1| ribonucleotide reductase A subunit [Synechococcus phage Syn19]
Length = 388
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENP---HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF- 57
RDES HL +++ + + L +E Q M E A+A+ G
Sbjct: 248 RDESQHLVITQNILRKWSEGDDPEMKLIAQEEQSYVTEMFKRTVEEEKAWANYLFRDGSL 307
Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN Y+++IANRR +G++P++ NP PW ++ K ++N ET +
Sbjct: 308 IGLNDRLLYNYVEWIANRRMKAVGIKPIYDIPAKNNPLPWTEHWLNSKGQQNAPQETEIE 367
Query: 115 EYQQGAELKW 124
Y G +
Sbjct: 368 SYVVGGIKQD 377
>gi|326567429|gb|EGE17544.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
catarrhalis BC1]
Length = 361
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPK-GFV 58
RDE+LHLN ++ + E+ T+ + + + A E A+ +
Sbjct: 225 RDEALHLNGTQHILTLLVKEHEDYQTITQTCKDEIYDIFESAYEQERAWIDYLFKDGSMI 284
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTEYQ 117
GLN QY+Q+I + R IGLEP+F T+NP PW++ + + ET +T Y
Sbjct: 285 GLNKEILTQYLQYITDIRMSAIGLEPVFN-TKNPIPWINNWLSSDNVQVAPQETEITSYV 343
Query: 118 QG 119
G
Sbjct: 344 VG 345
>gi|326564074|gb|EGE14316.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
catarrhalis 103P14B1]
gi|326570555|gb|EGE20595.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
catarrhalis BC8]
gi|326573198|gb|EGE23167.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
catarrhalis CO72]
Length = 361
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPK-GFV 58
RDE+LHLN ++ + E+ T+ + + + A E A+ +
Sbjct: 225 RDEALHLNGTQHILTLLVKEHEDYQTITQTCKDEIYDIFESAYEQERAWIDYLFKDGSMI 284
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTEYQ 117
GLN QY+Q+I + R IGLEP+F T+NP PW++ + + ET +T Y
Sbjct: 285 GLNKEILTQYLQYITDIRMSAIGLEPVFN-TKNPIPWINNWLSSDNVQVAPQETEITSYV 343
Query: 118 QG 119
G
Sbjct: 344 VG 345
>gi|313622843|gb|EFR93161.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
innocua FSL J1-023]
Length = 349
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F +VI I ENP L T+E + + A LE ++ E + G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWSEEVLQG-IEGID 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339
>gi|289435502|ref|YP_003465374.1| ribonucleoside-diphosphate reductase beta chain [Listeria seeligeri
serovar 1/2b str. SLCC3954]
gi|289171746|emb|CBH28292.1| ribonucleoside-diphosphate reductase beta chain [Listeria seeligeri
serovar 1/2b str. SLCC3954]
gi|313632343|gb|EFR99385.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
seeligeri FSL N1-067]
gi|313636848|gb|EFS02469.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
seeligeri FSL S4-171]
Length = 349
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F +VI I ENP L T+E + + A LE ++ E + G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVDLETEWSEEVLQG-IEGID 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339
>gi|261404531|ref|YP_003240772.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. Y412MC10]
gi|261280994|gb|ACX62965.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. Y412MC10]
Length = 343
Score = 89.2 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ H F +V Q+ + P L TKE + A LE +AH T+ G++
Sbjct: 214 RDENQHCYFFAEVFKQLLKDFPELNTKENIDYLYRTIDRAVELETNWAHYTLSN-VRGID 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID---LKKEKNFFETRVTEYQ 117
Y+++IANRR +GLE ++ + N PW+ D + +FFE + Y
Sbjct: 273 LNELSDYIKYIANRRITMMGLEKAYEGVDVNCMPWIKPFSDEALNATKTDFFEAKSRNYG 332
Query: 118 QGA 120
+
Sbjct: 333 KVG 335
>gi|315283233|ref|ZP_07871471.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
marthii FSL S4-120]
gi|313613124|gb|EFR87028.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
marthii FSL S4-120]
Length = 349
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F +VI I ENP L T E + + A LE ++ E + G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTDELVEYTHEAFRHAVELETEWSEEVLQG-IEGID 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339
>gi|16804193|ref|NP_465678.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
monocytogenes EGD-e]
gi|116873587|ref|YP_850368.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|217963685|ref|YP_002349363.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
monocytogenes HCC23]
gi|224500181|ref|ZP_03668530.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
monocytogenes Finland 1988]
gi|224501047|ref|ZP_03669354.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
monocytogenes FSL R2-561]
gi|254826956|ref|ZP_05231643.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
NrdB [Listeria monocytogenes FSL N3-165]
gi|254831409|ref|ZP_05236064.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
monocytogenes 10403S]
gi|255028522|ref|ZP_05300473.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
monocytogenes LO28]
gi|284802601|ref|YP_003414466.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
monocytogenes 08-5578]
gi|284995743|ref|YP_003417511.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
monocytogenes 08-5923]
gi|290893101|ref|ZP_06556089.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
NrdB [Listeria monocytogenes FSL J2-071]
gi|16411624|emb|CAD00232.1| lmo2154 [Listeria monocytogenes EGD-e]
gi|116742465|emb|CAK21589.1| ribonucleoside-diphosphate reductase beta chain [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|217332955|gb|ACK38749.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
monocytogenes HCC23]
gi|258599337|gb|EEW12662.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
NrdB [Listeria monocytogenes FSL N3-165]
gi|284058163|gb|ADB69104.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
monocytogenes 08-5578]
gi|284061210|gb|ADB72149.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
monocytogenes 08-5923]
gi|290557263|gb|EFD90789.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
NrdB [Listeria monocytogenes FSL J2-071]
gi|307571740|emb|CAR84919.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
monocytogenes L99]
Length = 349
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F +VI I ENP L T+E + + A LE ++ E + G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVLQG-IEGID 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339
>gi|255023762|ref|ZP_05295748.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
monocytogenes FSL J1-208]
Length = 284
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F +VI I ENP L T E + + A LE ++ E + G++
Sbjct: 156 RDELAHSKFISEVIRAILGENPELQTDELVEYTHDAFRHAVELETEWSEEVLQG-IEGID 214
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++
Sbjct: 215 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 274
>gi|47095728|ref|ZP_00233334.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
monocytogenes str. 1/2a F6854]
gi|254899145|ref|ZP_05259069.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
monocytogenes J0161]
gi|254912714|ref|ZP_05262726.1| ribonucleoside-diphosphate reductase [Listeria monocytogenes J2818]
gi|254937041|ref|ZP_05268738.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
NrdB [Listeria monocytogenes F6900]
gi|47015871|gb|EAL06798.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
monocytogenes str. 1/2a F6854]
gi|258609644|gb|EEW22252.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
NrdB [Listeria monocytogenes F6900]
gi|293590709|gb|EFF99043.1| ribonucleoside-diphosphate reductase [Listeria monocytogenes J2818]
Length = 349
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F +VI I ENP L T+E + + A LE ++ E + G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVLQG-IEGID 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339
>gi|46908387|ref|YP_014776.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
monocytogenes str. 4b F2365]
gi|47091823|ref|ZP_00229618.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
monocytogenes str. 4b H7858]
gi|226224761|ref|YP_002758868.1| ribonucleoside-diphosphate reductase, subunit beta [Listeria
monocytogenes Clip81459]
gi|254825283|ref|ZP_05230284.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
NrdB [Listeria monocytogenes FSL J1-194]
gi|254853280|ref|ZP_05242628.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
NrdB [Listeria monocytogenes FSL R2-503]
gi|254931734|ref|ZP_05265093.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
NrdB [Listeria monocytogenes HPB2262]
gi|255519998|ref|ZP_05387235.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
monocytogenes FSL J1-175]
gi|300764038|ref|ZP_07074034.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
monocytogenes FSL N1-017]
gi|46881658|gb|AAT04953.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
monocytogenes serotype 4b str. F2365]
gi|47019834|gb|EAL10572.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
monocytogenes str. 4b H7858]
gi|225877223|emb|CAS05937.1| Putative ribonucleoside-diphosphate reductase, subunit beta
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|258606640|gb|EEW19248.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
NrdB [Listeria monocytogenes FSL R2-503]
gi|293583289|gb|EFF95321.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
NrdB [Listeria monocytogenes HPB2262]
gi|293594529|gb|EFG02290.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
NrdB [Listeria monocytogenes FSL J1-194]
gi|300515379|gb|EFK42430.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
monocytogenes FSL N1-017]
gi|313617790|gb|EFR90013.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
innocua FSL S4-378]
gi|328465961|gb|EGF37142.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
monocytogenes 1816]
gi|328472177|gb|EGF43048.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
monocytogenes 220]
Length = 349
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F +VI I ENP L T+E + + A LE ++ E + G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWSEEVLQG-IEGID 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 339
>gi|270000178|gb|ACZ57936.1| m015L [Myxoma virus]
Length = 103
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 32 QKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN 91
++ +++ EA ++E + E +P +G+N QY++F+A+R ++G +F N
Sbjct: 2 ERVASIIKEAVVIEQRFLTEALPVRLIGMNCELMCQYIEFVADRLIAELGYSKIF-SATN 60
Query: 92 PFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
PF +M E I L+ + NFFE RV++YQ+ +
Sbjct: 61 PFDFM-ENISLEGKTNFFEKRVSDYQRMGVV 90
>gi|255018022|ref|ZP_05290148.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
monocytogenes FSL F2-515]
Length = 267
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F +VI I ENP L T+E + + A LE ++ E + G++
Sbjct: 139 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVLQG-IEGID 197
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++
Sbjct: 198 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 257
>gi|195953600|ref|YP_002121890.1| Ribonucleoside-diphosphate reductase [Hydrogenobaculum sp. Y04AAS1]
gi|195933212|gb|ACG57912.1| Ribonucleoside-diphosphate reductase [Hydrogenobaculum sp. Y04AAS1]
Length = 319
Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
++DE+ HL FGI ++N++ + K K R ++ EA +E YA MP+ +GL
Sbjct: 209 LKDETRHLAFGIYLLNELLKDKNKNDYK---DKFRVLMEEAVDIETEYARVAMPEKIIGL 265
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
+ + Y++++A+RR +G + ++ +NP W++ DL NFFE +V +Y
Sbjct: 266 SFETYTSYVKYLADRRMRSLGFDAIYGQ-KNPMKWLTTQTDLPDLTNFFEAKV-DY 319
>gi|326784253|ref|YP_004324793.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM5]
gi|310003484|gb|ADO97880.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM5]
Length = 388
Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Query: 2 RDESLHLNFGIDVINQIKI-ENPHLWTKEFQQ--KSRTMLHEATLLEIAYAHETM-PKGF 57
RDES HL +++ + K ++P + ++ + M E +A
Sbjct: 248 RDESQHLVITQNILRKWKEGDDPEMKEIAKEEKGWVQHMFERTVNEEKVWADYLFKQGSM 307
Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN Y+++IANRR IGL+P+F NP PW ++ K ++N ET +
Sbjct: 308 IGLNDRLLHNYVEWIANRRMKSIGLDPMFDIPAKNNPLPWTEHWLNSKGQQNAPQETEIE 367
Query: 115 EYQQGAELKW 124
Y G +
Sbjct: 368 SYVVGGIKQD 377
>gi|326782933|ref|YP_004323331.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-RSM4]
gi|310004192|gb|ADO98586.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-RSM4]
Length = 388
Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 7/130 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQK---SRTMLHEATLLEIAYAHETM-PKGF 57
RDES HL +++ + + +++ M E +A+
Sbjct: 248 RDESQHLVITQNILKNWAKGDDSEMAEIAKEEKPFVVDMFKRTVEEEKTWANYLFREGSM 307
Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN Y+++IANRR IGL+P+F NP PW ++ K ++N ET +
Sbjct: 308 IGLNDRLLHNYVEWIANRRMKAIGLDPVFDQVARNNPLPWTQHWLNSKGQQNAPQETEIE 367
Query: 115 EYQQGAELKW 124
Y G +
Sbjct: 368 SYVVGGIKQD 377
>gi|253574542|ref|ZP_04851883.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
sp. oral taxon 786 str. D14]
gi|251846247|gb|EES74254.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
sp. oral taxon 786 str. D14]
Length = 343
Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ H F +V Q+ I+ P L TKE + + A LE +AH T+ K G++
Sbjct: 214 RDENQHCYFFAEVFKQLLIDYPELNTKENIDYAYRTIDRAVELETNWAHYTL-KNVPGID 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID---LKKEKNFFETRVTEYQ 117
Y+++IAN+R +GLE + N PW+ D + +FFE + Y
Sbjct: 273 LNELSDYIKYIANKRLTLMGLEKAYAGVDINCMPWIKPFSDEALNATKTDFFEAKSRNYG 332
Query: 118 QGA 120
+
Sbjct: 333 KVG 335
>gi|325103985|ref|YP_004273639.1| ribonucleotide reductase [Pedobacter saltans DSM 12145]
gi|324972833|gb|ADY51817.1| ribonucleotide reductase [Pedobacter saltans DSM 12145]
Length = 324
Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF-VGLN 61
DE LH N GI +IN+IK E P + +Q+ ++ E+ +E G +N
Sbjct: 194 DEQLHANAGIYIINKIKEEFPEYIDEAVEQEIYDIVTESINIEDEILGWIFENGDLEHIN 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+M++ + QIG + L+ +E +P W E I +FF R EY +
Sbjct: 254 RRDLLNFMKYRIDVSLQQIGFKKLYNVSETEYSPMVWFEEEIFANSLDDFFAKRPVEYTK 313
>gi|319785673|ref|YP_004145148.1| ribonucleotide reductase [Pseudoxanthomonas suwonensis 11-1]
gi|317464185|gb|ADV25917.1| ribonucleotide reductase [Pseudoxanthomonas suwonensis 11-1]
Length = 354
Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F +VI I ENP L T E A LE + E + G G++
Sbjct: 226 RDELAHTKFISEVIRAIVGENPELQTDELADYVHLAFRHAIELETQWTGEVL-DGIDGID 284
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
+Y+++ AN+ +G+E L+ + T+N PW+ D + + +FFE R Y++
Sbjct: 285 VDEMIRYVKYRANKMAGMLGIESLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 344
>gi|297724673|ref|NP_001174700.1| Os06g0257450 [Oryza sativa Japonica Group]
gi|255676900|dbj|BAH93428.1| Os06g0257450 [Oryza sativa Japonica Group]
Length = 162
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+N QY++F+A+R +G + ++ NPF WM E+I L+ + NFFE RV +YQ+
Sbjct: 83 MNGDLMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGDYQKA 140
Query: 120 AELK 123
+ +
Sbjct: 141 SVMS 144
>gi|58532963|ref|YP_195186.1| ribonucleotide reductase A subunit [Synechococcus phage S-PM2]
gi|58331430|emb|CAF34216.1| ribonucleotide reductase A subunit [Synechococcus phage S-PM2]
Length = 394
Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 2 RDESLHLNFGIDVINQIKI-ENPHLWTKEFQQK--SRTMLHEATLLEIAYAHETMPK-GF 57
RDES H+ ++IN+ K ++P + Q++ M + EI +A
Sbjct: 254 RDESQHMTITQNIINKWKAGDDPDMVEIAKQEENNVYDMFKKCVEEEIIWADYLFRDGSM 313
Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLNA ++Y+++ ANRR IG++ +F + NP PW + K + ET V
Sbjct: 314 IGLNAKLLQKYVEWTANRRMKAIGMKQIFDVPLSNNPLPWTEHWLSSKGLQVAPQETEVE 373
Query: 115 EYQQGAELKW 124
Y G +
Sbjct: 374 SYVIGGIKQD 383
>gi|326560494|gb|EGE10876.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
catarrhalis 7169]
gi|326570427|gb|EGE20467.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
catarrhalis BC8]
gi|326575699|gb|EGE25622.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
catarrhalis CO72]
gi|326577166|gb|EGE27060.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
catarrhalis O35E]
Length = 376
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN +IN ++ ++P + + Q+++ + A E A+A+
Sbjct: 237 RDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQEKAWANYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY++FI N R IGL +F+ NP PW++ + + ET +T
Sbjct: 297 MIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWINAWLSSDNVQVAPQETEITT 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|10834911|ref|NP_066872.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 3]
gi|5102912|dbj|BAA78729.1| UL40 protein [Marek's disease virus serotype 2 MDV2]
gi|5689312|dbj|BAA82936.1| UL40 product homolog [Marek's disease virus serotype 2 MDV2]
gi|10800005|dbj|BAB16550.1| UL40 protein [Gallid herpesvirus 3]
Length = 353
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 7/124 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H+ + N K + + + EA LE A+ P+ L+
Sbjct: 236 RDEAIHVEASCCIFKNYIAGN-----KPSTARIQALFSEAVDLECAFLRAAAPRDSRLLD 290
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S Y+++ A+R + + P++ + ++ NFFE R T Y
Sbjct: 291 IGSICSYVRYSADRLLRMLDVPPIYGEPSPAADFPLSLMSASNNTNFFERRSTAYS--GS 348
Query: 122 LKWD 125
+ D
Sbjct: 349 VSND 352
>gi|221105497|ref|XP_002169241.1| PREDICTED: similar to ribonucleoside-diphosphate reductase small
chain [Hydra magnipapillata]
Length = 363
Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 9/119 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
+DE +H FG + I + ++ ++ EA + ++ + + +G+N
Sbjct: 236 KDEGMHTIFGCVIYTFIIY-------RLSFEEICELMKEAVEICKSFTKDAICVDMIGMN 288
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
Y++++A+R +G E +F + F +M I + NFFE R TEYQ+
Sbjct: 289 VELMYNYIEYVADRLMVYLGYEKIFMTKIPDQFQFMDT-IGFLNKDNFFERRATEYQKA 346
>gi|326560111|gb|EGE10501.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
catarrhalis 46P47B1]
gi|326564174|gb|EGE14410.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
catarrhalis 12P80B1]
gi|326573404|gb|EGE23372.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
catarrhalis 101P30B1]
Length = 376
Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN +IN ++ ++P + + Q+++ + A E A+A+
Sbjct: 237 RDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQEKAWANYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY++FI N R IGL +F+ NP PW++ + + ET +T
Sbjct: 297 MIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWINAWLSSDNVQVAPQETEITT 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|325294459|ref|YP_004280973.1| ribonucleotide reductase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064907|gb|ADY72914.1| ribonucleotide reductase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 352
Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ + + E + K M A E ++ + + +G+N
Sbjct: 224 RDELTHVILFEHFMKDLTDE--EFKKYLPKDKIYEMFKVAVNQEQRFSKKVIGNKILGMN 281
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID----LKKEKNFFETRVTEYQ 117
S E+Y ++AN+R +GL+P+F T NP+ + + D + NFFE VT Y
Sbjct: 282 EKSIEEYTYYVANKRLKALGLDPIFPDTPNPYEHLERIADTGGEGNVKANFFEATVTSYN 341
Query: 118 QGAELK-WD 125
Q + ++ WD
Sbjct: 342 QASAVEGWD 350
>gi|209972895|ref|YP_002300342.1| gp4 [Bacillus phage SPO1]
gi|209871215|gb|ACI90971.1| gp4 [Bacillus phage SPO1]
Length = 346
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F V+ + E P L T+E M+ EA LEI Y+ + + GL+
Sbjct: 218 RDEVAHAYFFSQVLRYLMAERPELHTEENVNFIYDMMQEAADLEIEYSQKILHD-IPGLD 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM---SEVIDLKKEKNFFETRVTEYQQ 118
E Y++ + NRR +GL+ ++ EN PWM + + + + + FE + Y++
Sbjct: 277 LEELEGYIKSLCNRRLRGVGLDDIYAGVENSMPWMIAFDDGSNNQTKSDMFEQKSRNYKK 336
>gi|12084869|ref|NP_073334.1| ribonucleotide reductase subunit 2 [Meleagrid herpesvirus 1]
gi|11095873|gb|AAG30080.1|AF282130_43 UL40 ribonucleotide reductase small subunit [Meleagrid herpesvirus
1]
gi|12025152|gb|AAG45778.1|AF291866_45 UL40 ribonucleotide reductase, small subunit [Meleagrid herpesvirus
1]
Length = 355
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 7/124 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H+ + K + T+ EA LE + P+ +N
Sbjct: 238 RDEAIHVEASCCIFKNYLAG-----PKPTTARIHTLFKEAVRLECEFLRTAAPRTSNIIN 292
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y+++ A+R + + P++ + P + ++ NFFE R T Y
Sbjct: 293 IDAICSYVRYSADRLLRALDILPIYDEPKPPADFPLVLMSAASNTNFFERRNTAYS--GS 350
Query: 122 LKWD 125
+ D
Sbjct: 351 VSND 354
>gi|291461082|ref|ZP_06026838.2| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
periodonticum ATCC 33693]
gi|291379059|gb|EFE86577.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
periodonticum ATCC 33693]
Length = 348
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ ++ +IK + P ++ + +M A EI + + +G+
Sbjct: 220 RDELSHVVLFRSIVKEIKNDYPEFFSA---ETIYSMFKTAVEQEINWTEHIIGNRVLGIT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ + E Y +++AN R +GLEPL+ + +NP+ + D + + NFFE VT Y
Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336
Query: 117 QQGAELK 123
+ +
Sbjct: 337 NMSSSID 343
>gi|71276518|ref|ZP_00652793.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Dixon]
gi|71900741|ref|ZP_00682863.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
gi|170729741|ref|YP_001775174.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
fastidiosa M12]
gi|71162695|gb|EAO12422.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Dixon]
gi|71729511|gb|EAO31620.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
gi|167964534|gb|ACA11544.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa M12]
Length = 349
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F +VI I ENP L T A LE + E + G G++
Sbjct: 221 RDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWTGEVL-NGIDGID 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
+Y+++ AN+ +G+E L+ + T+N PW+ D + + +FFE R Y++
Sbjct: 280 VEEMIRYVKYRANKMAGMLGIETLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 339
>gi|326565416|gb|EGE15593.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
catarrhalis 103P14B1]
Length = 376
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN +IN ++ ++P + + Q+++ + A E A+A+
Sbjct: 237 RDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQEKAWANYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY++FI N R IGL +F+ NP PW++ + + ET +T
Sbjct: 297 MIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWINAWLSSDNVQVAPQETEITT 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|296113118|ref|YP_003627056.1| ribonucleoside-diphosphate reductase 1 subunit beta [Moraxella
catarrhalis RH4]
gi|295920812|gb|ADG61163.1| ribonucleoside-diphosphate reductase 1 subunit beta [Moraxella
catarrhalis RH4]
Length = 380
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN +IN ++ ++P + + Q+++ + A E A+A+
Sbjct: 241 RDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQEKAWANYLFKDGS 300
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY++FI N R IGL +F+ NP PW++ + + ET +T
Sbjct: 301 MIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWINAWLSSDNVQVAPQETEITT 360
Query: 116 YQQG 119
Y G
Sbjct: 361 YLVG 364
>gi|255928974|ref|YP_003097286.1| ribonucleotide reductase B subunit [Synechococcus phage S-RSM4]
gi|255705260|emb|CAR63249.1| ribonucleotide reductase B subunit [Synechococcus phage S-RSM4]
Length = 394
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 2 RDESLHLNFGIDVINQIKI-ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-GF 57
RDES H+ +++N+ K ++P + KE ++ M + E +A
Sbjct: 254 RDESQHMTITQNILNKWKEGDDPEMVQIAKEEEENVYDMFRQCVEEEKLWAEYLFKDGSI 313
Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN +Y+++ ANRR IGL+ +F + NP PW + K + ET V
Sbjct: 314 IGLNDKLLSKYVEWTANRRLKSIGLKAIFDTPVSNNPLPWTEHWLSSKGMQVAPQETEVE 373
Query: 115 EYQQGAELKW 124
Y G+ +
Sbjct: 374 SYLIGSIKQD 383
>gi|703073|gb|AAA80557.1| ribonucleotide reductase small subunit [Gallid herpesvirus 2]
Length = 354
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 7/124 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H+ + K + T+ EA +E + P+ +N
Sbjct: 237 RDEAIHVEASCCIFKNYLAG-----PKPTTARIHTLFKEAVTVECEFLRTAAPRTSNIIN 291
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y+++ A+R + + P++ + P + ++ NFFE R T Y
Sbjct: 292 IDAICSYVRYSADRLLRALDILPIYDEPKPPADFPLVLMSAASNTNFFERRNTAYS--GS 349
Query: 122 LKWD 125
+ D
Sbjct: 350 VSND 353
>gi|326784150|ref|YP_004324543.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn1]
gi|310004882|gb|ADO99273.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn1]
Length = 395
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 2 RDESLHLNFGIDVINQIKI-ENPHLWTKEFQQK--SRTMLHEATLLEIAYAHETMPK-GF 57
RDES H+ +++N+ K ++P + +++ M ++ E+ +A
Sbjct: 255 RDESQHMTITQNILNKWKQGDDPDMVEIAQEEEKNVYEMFNKCVEEEVIWADYLFRDGSM 314
Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLNA ++Y+++ ANRR IGL+P F + NP PW + + + ET V
Sbjct: 315 IGLNAKLLQKYVEWTANRRMKSIGLKPTFDAPLSNNPLPWTEHWLSSRGLQVAPQETEVE 374
Query: 115 EYQQGAELKW 124
Y G +
Sbjct: 375 SYVIGGIAQD 384
>gi|237738722|ref|ZP_04569203.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
sp. 2_1_31]
gi|229423825|gb|EEO38872.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
sp. 2_1_31]
Length = 344
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ ++ +IK + P ++ + +M A EI + + +G+
Sbjct: 216 RDELSHVVLFRSIVKEIKNDYPEFFSA---ETIYSMFKTAVEQEINWTEHIIGNRVLGIT 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ + E Y +++AN R +GLEPL+ + +NP+ + D + + NFFE VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332
Query: 117 QQGAELK 123
+ +
Sbjct: 333 NMSSSID 339
>gi|207345015|gb|EDZ71971.1| YGR180Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 224
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RD + +F + HL TK + ++ EA +E Y ++P G++
Sbjct: 97 RDRGAYTDFSCLLF-------AHLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMD 149
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S Y++F+A+ G E + NPF +M + + + FFE +V++YQ+ ++
Sbjct: 150 LKSIHTYIEFVADGLLQGFGNEKYYNAV-NPFEFMED-VATAGKTTFFEKKVSDYQKASD 207
Query: 122 LK 123
+
Sbjct: 208 MS 209
>gi|269468252|gb|EEZ79942.1| ribonucleotide-diphosphate reductase subunit beta [uncultured SUP05
cluster bacterium]
Length = 319
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + KE + + M EA E +A
Sbjct: 177 RDEALHLTGTQHMLNLMRDGKDDPDMEKIAKECENEVIQMFKEACEQEKDWAEYLFRDGS 236
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLNA +QY+++I N R + +GL+P+F + NP PW++ +D + ET +T
Sbjct: 237 MIGLNADILKQYLEYITNVRMNALGLKPIFDEHVTNPLPWINSWLDSDNVQVAPQETEIT 296
Query: 115 EY 116
Y
Sbjct: 297 SY 298
>gi|257454213|ref|ZP_05619483.1| ribonucleoside-diphosphate reductase, beta subunit [Enhydrobacter
aerosaccus SK60]
gi|257448386|gb|EEV23359.1| ribonucleoside-diphosphate reductase, beta subunit [Enhydrobacter
aerosaccus SK60]
Length = 377
Score = 87.3 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVIN--QIKIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN +IN Q ++P + ++ QQ++ + +A E A+A
Sbjct: 237 RDEALHLNGTQHMINLMQWGKDDPDMVEIAQDCQQQAIEIFKDAAEQEKAWAKYLFKNGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R IGL P+F NP PW++ + + E+ +T
Sbjct: 297 MIGLNENILVQYVEYITNLRMDAIGLPPIFAAIKNNPIPWINAWLSSDNVQVAPQESEIT 356
Query: 115 EY---QQGAELKWD 125
Y Q AEL D
Sbjct: 357 SYLVGQIDAELSDD 370
>gi|212638239|ref|YP_002314759.1| ribonucleotide-diphosphate reductase subunit beta [Anoxybacillus
flavithermus WK1]
gi|212559719|gb|ACJ32774.1| Ribonucleotide reductase, beta subunit [Anoxybacillus flavithermus
WK1]
Length = 345
Score = 87.3 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLW-TKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+DE H F ++ + ENP + F + EA E ++ + + G+
Sbjct: 216 KDELCHSYFISQLVRAVLWENPQIDENGAFSAWIYDYIDEAIRYETEWSRFVL-RDIDGI 274
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK---KEKNFFETRVTEYQ 117
+ E+Y++++ N+R +GL+ + EN PW+ D + +FFE R Y
Sbjct: 275 DVIEMEKYIEYLGNKRLRMLGLDDRYDADENSMPWIRVFSDENVNLGKTDFFEARPRSYT 334
Query: 118 QGAELK 123
+ ++
Sbjct: 335 KTTDVN 340
>gi|315644971|ref|ZP_07898099.1| Ribonucleoside-diphosphate reductase [Paenibacillus vortex V453]
gi|315279682|gb|EFU42984.1| Ribonucleoside-diphosphate reductase [Paenibacillus vortex V453]
Length = 343
Score = 87.3 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ H F +V Q+ + P L ++E + A LE +AH T+ G++
Sbjct: 214 RDENQHCYFFAEVFKQLLKDFPELNSQENIDYLYRTIDRAVELETNWAHYTLSN-VRGID 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID---LKKEKNFFETRVTEYQ 117
Y+++IANRR +GLE + N PW+ D + +FFE + Y
Sbjct: 273 LNELGDYIKYIANRRITMMGLEKAYQGVDVNCMPWIKPFSDEALNATKTDFFEAKSRNYG 332
Query: 118 QGA 120
+
Sbjct: 333 KVG 335
>gi|17567153|ref|NP_508269.1| hypothetical protein F19G12.2 [Caenorhabditis elegans]
gi|10864352|gb|AAG24065.1| Hypothetical protein F19G12.2 [Caenorhabditis elegans]
Length = 668
Score = 86.9 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 28 KEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 87
K + + +++E+ L+E + E++P +G+N +Y++F+A+ ++G +
Sbjct: 562 KPAESRITEIINESVLVEQDFVRESLPTNLIGMNQHMMCKYVEFVADLLLEELGYSKRYN 621
Query: 88 YTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELKWD 125
T+NPF +M E I ++ + NFFE RV+EYQ+ + +
Sbjct: 622 -TKNPFDFM-ENISIEGKTNFFEKRVSEYQRPEMMVDE 657
>gi|15837799|ref|NP_298487.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
fastidiosa 9a5c]
gi|28198393|ref|NP_778707.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
fastidiosa Temecula1]
gi|9106169|gb|AAF84007.1|AE003954_4 ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa
9a5c]
gi|28056463|gb|AAO28356.1| ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa
Temecula1]
Length = 346
Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F +VI I ENP L T A LE + E + G G++
Sbjct: 218 RDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWTGEVL-DGIDGID 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
+Y+++ AN+ +G++ L+ + T+N PW+ D + + +FFE R Y++
Sbjct: 277 VEEMIRYVKYRANKMAGMLGIQTLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 336
>gi|326783253|ref|YP_004323801.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn33]
gi|310005200|gb|ADO99589.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn33]
Length = 296
Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENP---HLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GF 57
RDES HL +++N+ + + + KE Q +M A E +A
Sbjct: 156 RDESQHLVLTQNILNKWRDGDDPEMDIIAKEEQSWVMSMFQRAVDEEKMWAEYLFKNGSM 215
Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN Y+++IANRR I ++P+F NP PW ++ K ++N ET +
Sbjct: 216 IGLNERLLHNYVEWIANRRMKAICIKPMFDIPAKNNPLPWTEHWLNSKGQQNAPQETEIE 275
Query: 115 EYQQGAELKW 124
Y G +
Sbjct: 276 SYVIGGIKQD 285
>gi|294782021|ref|ZP_06747353.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
sp. 1_1_41FAA]
gi|294481832|gb|EFG29601.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
sp. 1_1_41FAA]
Length = 344
Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ ++ +IK + P ++ + +M A EI + + +G+
Sbjct: 216 RDELSHVVLFRSIVKEIKNDYPEFFSA---ETIYSMFKTAVEQEINWTEHIIGNRVLGIT 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ + E Y +++AN R +GLEPL+ + +NP+ + D + + NFFE VT Y
Sbjct: 273 SQTTEVYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332
Query: 117 QQGAELK 123
+ +
Sbjct: 333 NMSSSID 339
>gi|163784572|ref|ZP_02179421.1| ribonucleotide-diphosphate [Hydrogenivirga sp. 128-5-R1-1]
gi|159880158|gb|EDP73813.1| ribonucleotide-diphosphate [Hydrogenivirga sp. 128-5-R1-1]
Length = 139
Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKGF-VGL 60
DESLHL GI+ I I ENP + +F + R + +A LE+ Y G+
Sbjct: 22 DESLHLQNGIEAILTIIEENPEIVDDIKFVENIRDTIIDAVELELNYLKTKFGGTTIFGV 81
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
+ E YM++IA+RR ++G +P F +NP ++ + D+KK NFFE TEY
Sbjct: 82 SYKELEMYMKYIADRRLEELGFDPQFNIQQNPLKFLQKE-DVKKLTNFFEVSSTEY 136
>gi|239502693|ref|ZP_04662003.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
baumannii AB900]
Length = 309
Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 2 RDE-SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
RDE HL+ +++ ++ EN ++T+ F K+ + ++ +EI++
Sbjct: 187 RDEEGTHLDLFAHMLDTLRHENKDVFTQSFWNKALEVFLTSSEMEISWGKYITKGVT--- 243
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPL-FKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQ 118
N + E Y++ +AN R QI + + +NPFPW+ + EKNFFETRVT+Y+
Sbjct: 244 NPKAIEDYIKHLANLRAEQIQAPFVPYPGVKNPFPWVEQFSKPNTSEKNFFETRVTDYKV 303
Query: 119 GAELKW 124
G L W
Sbjct: 304 GGALVW 309
>gi|332141553|ref|YP_004427291.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
macleodii str. 'Deep ecotype']
gi|327551575|gb|AEA98293.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
macleodii str. 'Deep ecotype']
Length = 376
Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMP-KG 56
RDE+LHL+ ++N ++P + +E ++++R + A E +A
Sbjct: 237 RDENLHLSSTQHILNLWAKGKDDPEMAQIAQECKEEARAIFMNAVEQEKEWADYLFKTGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++IAN+R IGL+ F + NP PWM+ ++ + E+ ++
Sbjct: 297 MIGLNKEILCQYVEYIANQRMSAIGLDTPFDISSNPLPWMNNYLNSDNVQVAPQESEISS 356
Query: 116 Y---QQGAELKWD 125
Y Q + + D
Sbjct: 357 YLVGQIDSAVSED 369
>gi|125745092|ref|YP_001033969.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 2]
gi|327488446|sp|Q77MS0|RIR2_GAHVM RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|7673151|gb|AAF66775.1|AF147806_39 ribonucleotide reductase small subunit [Gallid herpesvirus 2]
gi|10180745|gb|AAG14233.1|AF243438_48 UL40 ribonucleotide reductase small subunit-like protein [Gallid
herpesvirus 2]
gi|104304005|gb|ABF72280.1| HSV-1 UL40-like protein [Gallid herpesvirus 2]
gi|148806369|gb|ABR13125.1| UL40 [Gallid herpesvirus 2]
gi|194346388|gb|ACF49570.1| UL40 [synthetic construct]
gi|194750382|gb|ACF94859.1| UL40 [Gallid herpesvirus 2]
gi|237626230|gb|ACR02753.1| UL40 [synthetic construct]
gi|237626404|gb|ACR02926.1| UL40 [synthetic construct]
Length = 343
Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 50/124 (40%), Gaps = 7/124 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H+ + + K + + + EA +E A+ P+ L+
Sbjct: 226 RDEAIHVEASCCIFKNYL-----MGPKPSIGRVQELFKEAVQIECAFLRTAAPRNSQLLD 280
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y+++ A+R ++ + P++ + + ++ NFFE R T Y
Sbjct: 281 VEAICSYVRYSADRLLKELDMPPIYNEPKPTADFPLALMTASNNTNFFERRNTAYS--GS 338
Query: 122 LKWD 125
+ D
Sbjct: 339 VSND 342
>gi|215275538|sp|P0C8I0|RIR2_ASFK5 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
Length = 327
Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF---V 58
RDE +H +F +I+ P ++ +L EA L + K
Sbjct: 196 RDEGMHCSFACFLISNYLNNIPE------EKIIHKILKEAVELVDEFISYAFDKARGSVP 249
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117
G + QY+++ + C + + ++K ENPFP M++ ++ ++ NFFE R T+YQ
Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMLQCKSIYKV-ENPFPQMTKFFLNEVEKTNFFELRPTQYQ 308
>gi|148244629|ref|YP_001219323.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
Vesicomyosocius okutanii HA]
gi|146326456|dbj|BAF61599.1| ribonucleoside-diphosphate reductase beta subunit [Candidatus
Vesicomyosocius okutanii HA]
Length = 378
Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + KE +++ TM EA E +A
Sbjct: 237 RDEALHLTGTQHILNLMSDGKDDPDMKKIAKECEKEVITMFKEACEQEKDWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLNA +QY+++I N R + L P+F NP PW++ +D + ET +T
Sbjct: 297 MIGLNAKMLKQYLEYITNVRMKALNLSPVFDECINPLPWINHWLDSDNVQVAPQETEITS 356
Query: 116 Y 116
Y
Sbjct: 357 Y 357
>gi|71901120|ref|ZP_00683227.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
gi|182681036|ref|YP_001829196.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
fastidiosa M23]
gi|71729125|gb|EAO31249.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
gi|182631146|gb|ACB91922.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa M23]
gi|307579504|gb|ADN63473.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
fastidiosa subsp. fastidiosa GB514]
Length = 349
Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F +VI I ENP L T A LE + E + G G++
Sbjct: 221 RDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWTGEVL-DGIDGID 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
+Y+++ AN+ +G++ L+ + T+N PW+ D + + +FFE R Y++
Sbjct: 280 VEEMIRYVKYRANKMAGMLGIQTLYTETTDNVMPWIRAYADNFTETKTDFFEMRNASYKK 339
>gi|323337480|gb|EGA78728.1| Rnr4p [Saccharomyces cerevisiae Vin13]
Length = 328
Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RD + +F + HL TK + ++ EA +E Y ++P G++
Sbjct: 201 RDRGAYTDFSCLLF-------AHLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMD 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S Y++F+A+ G E + NPF +M + + + FFE +V++YQ+ ++
Sbjct: 254 LKSIHTYIEFVADGLLQGFGNEKYYNAV-NPFEFMED-VATAGKTTFFEKKVSDYQKASD 311
Query: 122 LK 123
+
Sbjct: 312 MS 313
>gi|254303614|ref|ZP_04970972.1| ribonucleoside-diphosphate reductase [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
gi|148323806|gb|EDK89056.1| ribonucleoside-diphosphate reductase [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
Length = 344
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ ++ +IK + P + +M A EIA+ + +G+
Sbjct: 216 RDELSHVVLFRSMVKEIKNDFP---NFFSAETIYSMFKTAVEQEIAWTEHIIGNRVLGIT 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ + E Y +++AN R +GLEPLF + +NP+ + D + + NFFE VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332
Query: 117 QQGAELK 123
+ +
Sbjct: 333 NMSSSID 339
>gi|256027986|ref|ZP_05441820.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
D11]
Length = 348
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ ++ +IK + P + +M A EIA+ + +G+
Sbjct: 220 RDELSHVVLFRSIVKEIKNDFP---NFFSAETVYSMFKTAVEQEIAWTEHIIGNRVLGIT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ + E Y +++AN R +GLEPLF + +NP+ + D + + NFFE VT Y
Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336
Query: 117 QQGAELK 123
+ +
Sbjct: 337 NMSSSID 343
>gi|239993885|ref|ZP_04714409.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
macleodii ATCC 27126]
Length = 376
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL+ ++N ++P + +E ++++R + A E +A
Sbjct: 237 RDENLHLSSTQHILNLWAKGKDDPEMAQIAEECKEEARAIFMNAVEQEKQWADYLFQNGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++IAN+R IGL+ F+ + NP PWM+ ++ + E+ ++
Sbjct: 297 MIGLNKEILCQYVEYIANQRMSAIGLDTPFEISSNPLPWMNNYLNSDNVQVAPQESEISS 356
Query: 116 Y---QQGAELKWD 125
Y Q + + D
Sbjct: 357 YLVGQIDSAVSED 369
>gi|237742881|ref|ZP_04573362.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
sp. 4_1_13]
gi|229430529|gb|EEO40741.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
sp. 4_1_13]
Length = 344
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ ++ +IK + P + +M A EI + + +G+
Sbjct: 216 RDELSHVVLFRSMVKEIKNDFP---NFFSAETIYSMFKTAVEQEITWTEHIIGNRVLGIT 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ + E Y +++AN R +GLEPL+ + +NP+ + D + + NFFE VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332
Query: 117 QQGAELK 123
+ +
Sbjct: 333 NMSSSID 339
>gi|218249013|ref|YP_002374384.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8801]
gi|218169491|gb|ACK68228.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8801]
Length = 344
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ +I + + PH + M A E + + + +G+
Sbjct: 216 RDELSHVRLYQKLIPEARKVFPH-----SVDQIYDMFDRAVKYECQWTNHIVGNNILGIT 270
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114
S EQY +++AN R IGL+PL+ Y ++P+ + D KK + NFFE VT
Sbjct: 271 EASTEQYTKYLANIRLRSIGLDPLYPDIKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 330
Query: 115 EYQQGAELK-WD 125
Y + + WD
Sbjct: 331 SYVMSSGITGWD 342
>gi|163786628|ref|ZP_02181076.1| ribonucleoside-diphosphate reductase , beta subunit 1
[Flavobacteriales bacterium ALC-1]
gi|159878488|gb|EDP72544.1| ribonucleoside-diphosphate reductase , beta subunit 1
[Flavobacteriales bacterium ALC-1]
Length = 429
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 6/130 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
++E++H +FGID+I IK ENP + E + R + EA E L
Sbjct: 298 KEENIHGDFGIDIIKIIKAENPTWFDAEHNEIVRELCREAFASESELVDWIFEAGELEFL 357
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQ 117
++++ N IG+E +F E W + I K +FF R Y
Sbjct: 358 PKDVINEFLKNRFNNSLESIGIEKVFDVDETLLTQTEWFDDEIIGTKHGDFFVKRSINYS 417
Query: 118 Q--GAELKWD 125
+ + D
Sbjct: 418 KRTKSITSDD 427
>gi|257062099|ref|YP_003139987.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8802]
gi|256592265|gb|ACV03152.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8802]
Length = 355
Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ +I + + PH + M A E + + + +G+
Sbjct: 227 RDELSHVRLYQKLIPEARKVFPH-----SVDQIYDMFDRAVKYECQWTNHIVGNNILGIT 281
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114
S EQY +++AN R IGL+PL+ Y ++P+ + D KK + NFFE VT
Sbjct: 282 EASTEQYTKYLANIRLRSIGLDPLYPDIKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 341
Query: 115 EYQQGAELK-WD 125
Y + + WD
Sbjct: 342 SYVMSSGITGWD 353
>gi|71280050|ref|YP_269047.1| ribonucleotide-diphosphate reductase subunit beta [Colwellia
psychrerythraea 34H]
gi|71145790|gb|AAZ26263.1| ribonucleotide reductase, beta subunit [Colwellia psychrerythraea
34H]
Length = 376
Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + ++E + + + + E +A
Sbjct: 237 RDEALHLTGTQHILNNWRSGKDDPEMKIISEELRDEGLQIFLDVVEQEKEWAQYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLNA QY+++I+N+R IG F NP PWM+ + + ET ++
Sbjct: 297 MIGLNADILNQYIEYISNQRLTAIGFGAPFDIKSNPLPWMNAYLVSDNVQVAPQETEISS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|289765931|ref|ZP_06525309.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
sp. D11]
gi|289717486|gb|EFD81498.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
sp. D11]
Length = 344
Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ ++ +IK + P + +M A EIA+ + +G+
Sbjct: 216 RDELSHVVLFRSIVKEIKNDFP---NFFSAETVYSMFKTAVEQEIAWTEHIIGNRVLGIT 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ + E Y +++AN R +GLEPLF + +NP+ + D + + NFFE VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332
Query: 117 QQGAELK 123
+ +
Sbjct: 333 NMSSSID 339
>gi|260497963|ref|ZP_05816079.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
sp. 3_1_33]
gi|260196471|gb|EEW94002.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
sp. 3_1_33]
Length = 344
Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ ++ +IK + P + +M A EIA+ + +G+
Sbjct: 216 RDELSHVVLFRSIVKEIKNDFP---NFFSAETVYSMFKTAVEQEIAWTEHIIGNRVLGIT 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ + E Y +++AN R +GLEPLF + +NP+ + D + + NFFE VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332
Query: 117 QQGAELK 123
+ +
Sbjct: 333 NMSSSID 339
>gi|67921622|ref|ZP_00515140.1| Ribonucleoside-diphosphate reductase [Crocosphaera watsonii WH
8501]
gi|67856734|gb|EAM51975.1| Ribonucleoside-diphosphate reductase [Crocosphaera watsonii WH
8501]
Length = 321
Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ +I + + PH ++ M A E + + + +G+
Sbjct: 193 RDELSHVRLYQKLIPEARKVFPH-----SVEQIYEMFDMAVNYECRWTNHIVGNNILGIT 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114
S E+Y +++AN R IGLEPL+ Y+++P+ + D KK + NFFE VT
Sbjct: 248 ESSTEKYTKYLANIRLRSIGLEPLYPEPKYSKSPYTHLERFSDTKKAAHTKANFFEATVT 307
Query: 115 EYQQGAELK-WD 125
Y + L WD
Sbjct: 308 SYVMSSGLTGWD 319
>gi|41387638|gb|AAS01682.1| ribonucleotide reductase small subunit [Gallid herpesvirus 2]
Length = 343
Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 49/124 (39%), Gaps = 7/124 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H+ + + K + + + EA +E A+ P L+
Sbjct: 226 RDEAIHVEASCCIFKNYL-----MGPKPSIGRVQELFKEAVQIECAFLRTAAPHNSQLLD 280
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y+++ A+R ++ + P++ + + ++ NFFE R T Y
Sbjct: 281 VEAICSYVRYSADRLLKELDMPPIYNEPKPTADFPLALMTASNNTNFFERRNTAYS--GS 338
Query: 122 LKWD 125
+ D
Sbjct: 339 VSND 342
>gi|78049716|ref|YP_365891.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|78038146|emb|CAJ25891.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 347
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++I I EN L E A LE + E + G G++
Sbjct: 219 RDELAHTKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
+Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337
>gi|149182583|ref|ZP_01861054.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
SG-1]
gi|148849719|gb|EDL63898.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
SG-1]
Length = 345
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH+ + ++ ENP T E + A LEI + + + GL
Sbjct: 217 RDEQLHVGLFEKIYKEVLHENPEYDTAELKVFGTQAFKRAAELEIEWGEQIIGNKIDGLL 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK-KEKNFFETRVTEYQQG 119
E Y++F+AN+R Q+G + F+ Y NP W+ ++ + +FFE + +Y +
Sbjct: 277 MSDLEAYIKFMANKRAEQMGFQAPFEGYRTNPLRWIVAYQEVDLGKTDFFEQKSRQYTKT 336
Query: 120 AELK 123
++
Sbjct: 337 SDAN 340
>gi|19703451|ref|NP_603013.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|19713529|gb|AAL94312.1| Ribonucleoside-diphosphate reductase beta chain [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
Length = 348
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ ++ +IK + P + +M A EI + + +G+
Sbjct: 220 RDELSHVVLFRSMVKEIKNDFP---NFFSAETIYSMFKTAVEQEITWTEHIIGNRVLGIT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ + E Y +++AN R +GLEPLF + +NP+ + D + + NFFE VT Y
Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336
Query: 117 QQGAELK 123
+ +
Sbjct: 337 NMSSSID 343
>gi|6321619|ref|NP_011696.1| Rnr4p [Saccharomyces cerevisiae S288c]
gi|1710402|sp|P49723|RIR4_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 2;
AltName: Full=Ribonucleotide reductase R2 subunit 2;
AltName: Full=Ribonucleotide reductase small subunit 2
gi|15826570|pdb|1JK0|B Chain B, Ribonucleotide Reductase Y2y4 Heterodimer
gi|52695527|pdb|1SMS|A Chain A, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer
From Saccharomyces Cerevisiae
gi|52695528|pdb|1SMS|B Chain B, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer
From Saccharomyces Cerevisiae
gi|915546|gb|AAB72236.1| Rnr4p [Saccharomyces cerevisiae]
gi|1323319|emb|CAA97206.1| RNR4 [Saccharomyces cerevisiae]
gi|285812375|tpg|DAA08275.1| TPA: Rnr4p [Saccharomyces cerevisiae S288c]
gi|323304781|gb|EGA58540.1| Rnr4p [Saccharomyces cerevisiae FostersB]
gi|323308943|gb|EGA62174.1| Rnr4p [Saccharomyces cerevisiae FostersO]
Length = 345
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RD + +F + HL TK + ++ EA +E Y ++P G++
Sbjct: 218 RDRGAYTDFSCLLF-------AHLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMD 270
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S Y++F+A+ G E + NPF +M + + + FFE +V++YQ+ ++
Sbjct: 271 LKSIHTYIEFVADGLLQGFGNEKYYNAV-NPFEFMED-VATAGKTTFFEKKVSDYQKASD 328
Query: 122 LK 123
+
Sbjct: 329 MS 330
>gi|332170225|gb|AEE19480.1| ATP-cone domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 425
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 6/130 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
++E +H +FGID+I IK ENP + E + M EA E L
Sbjct: 294 KEEQIHGDFGIDIIKIIKAENPEWFDAEHSATVQEMCKEAFKAESNIVDWIFEAGELDFL 353
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
++++ N+ IG+EP+F+ E W + I K +FF R Y
Sbjct: 354 PKALVNEFIKDRFNKSLTSIGIEPVFEVDETLLKDAEWFDDEIIGTKHGDFFVKRSVNYT 413
Query: 118 QGAE--LKWD 125
+ A+ + D
Sbjct: 414 KRAQSITEDD 423
>gi|296329016|ref|ZP_06871523.1| ribonucleotide-diphosphate reductase beta subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|296153909|gb|EFG94720.1| ribonucleotide-diphosphate reductase beta subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 348
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ ++ +IK + P + +M A EI + + +G+
Sbjct: 220 RDELSHVVLFRSMVKEIKNDFP---NFFSAETIYSMFKTAVEQEITWTEHIIGNRVLGIT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ + E Y +++AN R +GLEPLF + +NP+ + D + + NFFE VT Y
Sbjct: 277 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 336
Query: 117 QQGAELK 123
+ +
Sbjct: 337 NMSSSID 343
>gi|229916488|ref|YP_002885134.1| ribonucleotide-diphosphate reductase subunit beta [Exiguobacterium
sp. AT1b]
gi|229467917|gb|ACQ69689.1| Ribonucleoside-diphosphate reductase [Exiguobacterium sp. AT1b]
Length = 346
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLW-TKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
RDE H F ++ + ENP + +F Q + EA LEI + + + GL
Sbjct: 216 RDEMQHSYFISQLLRAVLTENPKIDENGQFSQFVYDTMAEAVDLEIEWCEYVL-RDLDGL 274
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID---LKKEKNFFETRVTEY 116
+ Y++++AN+R IGL L++ + E+ PW+ D + +FFE + Y
Sbjct: 275 DVSEMRDYVKYLANKRLRVIGLNDLYEGFDEDVMPWIRAYSDDSLNATKSDFFEQKSRSY 334
Query: 117 QQ 118
+
Sbjct: 335 AK 336
>gi|151943458|gb|EDN61769.1| ribonucleotide reductase [Saccharomyces cerevisiae YJM789]
gi|190406805|gb|EDV10072.1| ribonucleotide reductase [Saccharomyces cerevisiae RM11-1a]
gi|256270921|gb|EEU06048.1| Rnr4p [Saccharomyces cerevisiae JAY291]
gi|259146684|emb|CAY79941.1| Rnr4p [Saccharomyces cerevisiae EC1118]
gi|323333575|gb|EGA74969.1| Rnr4p [Saccharomyces cerevisiae AWRI796]
gi|323348450|gb|EGA82695.1| Rnr4p [Saccharomyces cerevisiae Lalvin QA23]
Length = 345
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RD + +F + HL TK + ++ EA +E Y ++P G++
Sbjct: 218 RDRGAYTDFSCLLF-------AHLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMD 270
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S Y++F+A+ G E + NPF +M + + + FFE +V++YQ+ ++
Sbjct: 271 LKSIHTYIEFVADGLLQGFGNEKYYNAV-NPFEFMED-VATAGKTTFFEKKVSDYQKASD 328
Query: 122 LK 123
+
Sbjct: 329 MS 330
>gi|51830370|gb|AAU09736.1| YGR180C [Saccharomyces cerevisiae]
Length = 345
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RD + +F + HL TK + ++ EA +E Y ++P G++
Sbjct: 218 RDRGAYTDFSCLLF-------AHLRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMD 270
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
S Y++F+A+ G E + NPF +M + + + FFE +V++YQ+ ++
Sbjct: 271 LKSIHTYIEFVADGLLQGFGNEKYYNAV-NPFEFMED-VATAGKTTFFEKKVSDYQKASD 328
Query: 122 LK 123
+
Sbjct: 329 MS 330
>gi|312162814|ref|YP_003933799.1| ribonucleotide reductase subunit 2 [Saimiriine herpesvirus 1]
gi|308096447|gb|ADO13787.1| ribonucleotide reductase subunit 2 [Saimiriine herpesvirus 1]
Length = 338
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N P K + + EA +EI + H P+ L+
Sbjct: 217 RDEAIHTTASCYIYNNYLTGYP----KPSTDRIHYLFREAVEIEIRFIHSQAPRDSHILD 272
Query: 62 APSCEQ---YMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
A + Q Y+ F A+R I L PLF + ++ +K NFFE+R T Y
Sbjct: 273 AAALRQIDNYVHFCADRLLKMIKLPPLFDAPAPDCSFPLALMFTEKHTNFFESRSTAYA- 331
Query: 119 GAELKW 124
G +
Sbjct: 332 GTVVND 337
>gi|256846215|ref|ZP_05551673.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
sp. 3_1_36A2]
gi|256719774|gb|EEU33329.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
sp. 3_1_36A2]
Length = 344
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ ++ +IK + P + +M A EI + + +G+
Sbjct: 216 RDELSHVVLFRSMVKEIKNDFP---NFFSAETIYSMFKTAVEQEITWTEHIIGNRVLGIT 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ + E Y +++AN R +GLEPLF + +NP+ + D + + NFFE VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332
Query: 117 QQGAELK 123
+ +
Sbjct: 333 NMSSSID 339
>gi|294784669|ref|ZP_06749957.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
sp. 3_1_27]
gi|294486383|gb|EFG33745.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
sp. 3_1_27]
Length = 344
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ ++ +IK + P + +M A EI + + +G+
Sbjct: 216 RDELSHVVLFRSMVKEIKNDFP---NFFSAETIYSMFKTAVEQEITWTEHIIGNRVLGIT 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ + E Y +++AN R +GLEPLF + +NP+ + D + + NFFE VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332
Query: 117 QQGAELK 123
+ +
Sbjct: 333 NMSSSID 339
>gi|284929768|ref|YP_003422290.1| ribonucleotide reductase, subunit beta [cyanobacterium UCYN-A]
gi|284810212|gb|ADB95909.1| ribonucleotide reductase, beta subunit [cyanobacterium UCYN-A]
Length = 354
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ +I + + PH ++ M A E + + + +G+
Sbjct: 226 RDELSHVRLYQKLIPEARKVFPH-----STEQIYEMFDTAVNHECRWTNHIVGSNILGIT 280
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114
S EQY +++AN R IGLEPL+ ++T++P+ + D KK + NFFE+ VT
Sbjct: 281 ESSTEQYTKYLANIRLRSIGLEPLYTGEEFTKSPYSHLERFSDTKKDGHTKANFFESTVT 340
Query: 115 EYQQGAELK-WD 125
Y + + WD
Sbjct: 341 SYVMSSGVSGWD 352
>gi|237743586|ref|ZP_04574067.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
sp. 7_1]
gi|229432617|gb|EEO42829.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
sp. 7_1]
Length = 344
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ ++ +IK + P + +M A EI + + +G+
Sbjct: 216 RDELSHVVLFRSMVKEIKNDFP---NFFSAETIYSMFKTAVEQEITWTEHIIGNRVLGIT 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ + E Y +++AN R +GLEPLF + +NP+ + D + + NFFE VT Y
Sbjct: 273 SQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSY 332
Query: 117 QQGAELK 123
+ +
Sbjct: 333 NMSSSID 339
>gi|70921511|ref|XP_734071.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56506464|emb|CAH78308.1| hypothetical protein PC000956.02.0 [Plasmodium chabaudi chabaudi]
Length = 87
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 48 YAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
+ ++P +G+N+ QY++F+A+R +G +F +++NPF WM +I L+ + N
Sbjct: 1 FLVWSLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVF-HSKNPFSWMD-LISLQGKTN 58
Query: 108 FFETRVTEYQQGAEL 122
FFE RV +YQ+ +
Sbjct: 59 FFEKRVADYQKSGVM 73
>gi|313607545|gb|EFR83848.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
monocytogenes FSL F2-208]
Length = 187
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F +VI I ENP L T+E + + A LE ++ E + G++
Sbjct: 59 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVLQG-IEGID 117
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
Y+++ AN+ +G+ L+ +++N W+ D + + +FFE R + Y++
Sbjct: 118 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 177
>gi|78486104|ref|YP_392029.1| ribonucleotide-diphosphate reductase subunit beta [Thiomicrospira
crunogena XCL-2]
gi|78364390|gb|ABB42355.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Thiomicrospira crunogena XCL-2]
Length = 377
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL+ +IN + ++P + KE ++K + EA E +A
Sbjct: 238 RDEALHLSGTQHLINILSEGKDDPEMMEIAKENEEKVYEIFREAAEQEKEWADYLFKDGS 297
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLNA + Y+++I N R I L P+F+ NP PWM+ + + E+ ++
Sbjct: 298 MIGLNASILKDYVEYITNTRIKAIKLNPIFENKSNPLPWMNNWLVSDNVQVAPQESEISS 357
Query: 116 Y---QQGAELKWD 125
Y Q + + D
Sbjct: 358 YLVGQVDSTVDKD 370
>gi|84998662|ref|XP_954052.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
reductase small chain [Theileria annulata]
gi|65305050|emb|CAI73375.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
reductase small chain, putative [Theileria annulata]
Length = 322
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 61/104 (58%), Gaps = 9/104 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +FG + + +K + P + + ++ EA ++E +Y +++P +G+N
Sbjct: 224 RDEGLHADFGCFIYHNLKHKLPE-------EAVQQIIKEAVVVERSYICDSLPCDLIGMN 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 105
+ QY++F+A+R +G+ P++ T NPF WM ++I ++ +
Sbjct: 277 SQLMTQYIEFVADRLLQSLGVRPVYNVT-NPFDWM-QLISVQVK 318
>gi|269861752|ref|XP_002650564.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220065950|gb|EED43491.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 106
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 28 KEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 87
++ EA +E + E++P +G+N QY++F+A+R +G + ++
Sbjct: 1 HNKCTVIEDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYN 60
Query: 88 YTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ NPF +M E I L+ + NFFE R YQ+G
Sbjct: 61 VS-NPFDFM-ENISLQGKTNFFERREANYQKG 90
>gi|326796346|ref|YP_004314166.1| ribonucleoside-diphosphate reductase [Marinomonas mediterranea
MMB-1]
gi|326547110|gb|ADZ92330.1| Ribonucleoside-diphosphate reductase [Marinomonas mediterranea
MMB-1]
Length = 377
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + +E +Q+ + EA E +A
Sbjct: 238 RDEALHLTGTQHMLNLMTSGKDDPEMAIIAQECRQEITDIFIEAAQQEKEWAKYLFKDGS 297
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLNA QY+++I+N R +GLEP F+ NP PW++ + + E ++
Sbjct: 298 MIGLNAEILGQYVEYISNVRMQAVGLEPAFETKSNPIPWINAWLVSDNVQVAPQEAEISS 357
Query: 116 YQQG 119
Y G
Sbjct: 358 YLVG 361
>gi|15079087|ref|NP_149839.1| 376L [Invertebrate iridescent virus 6]
gi|82012049|sp|Q91FE8|RIR2_IIV6 RecName: Full=Probable ribonucleoside-diphosphate reductase small
subunit 376L; AltName: Full=Ribonucleotide reductase
small subunit
gi|15042456|gb|AAK82236.1|AF303741_377 376L [Invertebrate iridescent virus 6]
Length = 360
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 56/148 (37%), Gaps = 26/148 (17%)
Query: 3 DESLHLNFGIDVINQIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-- 56
DE+ H I++ EN + Q+ + E LE A+ K
Sbjct: 205 DETQHTEGMIELFKVFVEENKTGDQPIRPSVLQETVYKIAKEMVGLEEAFIDLVFKKYKD 264
Query: 57 ----------------FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMS 97
F GL + Y+++IA+RR + +G + +F Y NP P +
Sbjct: 265 EPINDDNDLETKDNKDFFGLTPQRLKAYIKYIADRRLNLMGYKSIFNLEPYPTNPLPELE 324
Query: 98 EVIDLKKEKNFFETRVTEYQ-QGAELKW 124
+I+ NFFE R T+Y + W
Sbjct: 325 IMINAPTHTNFFENRSTDYANVSTKGTW 352
>gi|132618|sp|P26713|RIR2_ASFM2 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
Length = 327
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK---GFV 58
RDE +H +F +I+ P ++ +L EA L + + K
Sbjct: 196 RDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFINYAFDKARGRVP 249
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117
G + QY+++ + C + + ++ NPFP M++ ++ ++ NFFE R T+YQ
Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMMQCKSIYNVG-NPFPQMTKFFLNEVEKTNFFELRPTQYQ 308
>gi|294625675|ref|ZP_06704297.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|294664800|ref|ZP_06730124.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
gi|292600044|gb|EFF44159.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|292605431|gb|EFF48758.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
Length = 347
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++I I EN L + A LE + E + G G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
+Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337
>gi|159030376|emb|CAO91271.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 355
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ +I + PH ++ M A E + + + +G+
Sbjct: 227 RDELSHVRLYQKLIPEAMAIFPH-----SVEQIYEMFDSAVKHECCWTNHIVGNDILGIT 281
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114
S EQY +++AN R IGLEPL+ KY ++P+ + D KK + NFFE VT
Sbjct: 282 EYSTEQYTKYLANIRLKAIGLEPLYREEKYNKSPYNHLERFSDTKKEGHTKANFFEATVT 341
Query: 115 EYQQGAELK-WD 125
Y + L WD
Sbjct: 342 SYVMSSGLTGWD 353
>gi|289670858|ref|ZP_06491933.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
campestris pv. musacearum NCPPB4381]
Length = 349
Score = 85.0 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++I I EN L + A LE + E + G G++
Sbjct: 221 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
+Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++
Sbjct: 280 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 339
>gi|225849393|ref|YP_002729557.1| ribonucleoside-diphosphate reductase subunit beta
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225644764|gb|ACN99814.1| ribonucleoside-diphosphate reductase, beta subunit
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 326
Score = 85.0 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKGF-VGL 60
DESLHL GI+ I + ENP + F + R + +A LE+ Y G+
Sbjct: 209 DESLHLQNGIEAILTMVEENPEIVDDYNFVENIRQSIIDAVELELNYLKTKFGGTTIFGV 268
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
+ E+YM++IA+RR ++G +P F +NP ++ + D+KK NFFE TEY
Sbjct: 269 SYNELERYMKYIADRRLVELGFDPQFGIDQNPLKFLQKE-DVKKLTNFFEVSSTEY 323
>gi|126654703|ref|ZP_01726237.1| hypothetical protein CY0110_09717 [Cyanothece sp. CCY0110]
gi|126623438|gb|EAZ94142.1| hypothetical protein CY0110_09717 [Cyanothece sp. CCY0110]
Length = 352
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ +I + + PH ++ M A E + + + +G+
Sbjct: 224 RDELSHVRLYQKLIPEARKVFPH-----SVEQIYEMFDMAVNYECRWTNHIVGNNILGIT 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114
S E+Y +++AN R IGLEPL+ Y ++P+ + D KK + NFFE VT
Sbjct: 279 ESSTEKYTKYLANIRLRSIGLEPLYPEPKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 338
Query: 115 EYQQGAELK-WD 125
Y + + WD
Sbjct: 339 SYVMSSGVTGWD 350
>gi|51557509|ref|YP_068343.1| ribonucleotide reductase subunit 2 [Suid herpesvirus 1]
gi|1710400|sp|P50645|RIR2_SUHVK RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|437737|emb|CAA50977.1| ribonucleotide reductase [Suid herpesvirus 1]
gi|525265|emb|CAA56776.1| ribonucleotid reductase, small subunit [Suid herpesvirus 1]
gi|40253968|tpg|DAA02163.1| TPA_exp: small subunit of ribonucleotide reductase [Suid
herpesvirus 1]
gi|1090510|prf||2019240B ribonucleotide reductase:SUBUNIT=small
Length = 303
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + + N + P + + + + EA +E + P+ + L+
Sbjct: 185 RDEAIHTSASCCIYNNYLGDAP----RPDEARIHQLFAEAVEIECEFLRARAPRDSLLLD 240
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
P+ Y+++ A+R IG PLF + ++ +K NFFE R T Y G
Sbjct: 241 LPAIISYVRYSADRLLQAIGASPLFGAPAPAADFPMALMVAEKHTNFFERRSTNY-TGTV 299
Query: 122 LKW 124
+
Sbjct: 300 VND 302
>gi|86140897|ref|ZP_01059456.1| ribonucleoside-diphosphate reductase, beta subunit 1
[Leeuwenhoekiella blandensis MED217]
gi|85832839|gb|EAQ51288.1| ribonucleoside-diphosphate reductase, beta subunit 1
[Leeuwenhoekiella blandensis MED217]
Length = 427
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 4/124 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF-VGL 60
++E +H +FG+D+IN IK ENP + +E + M + E KG L
Sbjct: 296 KEEQIHGDFGVDIINIIKKENPEWFDEEHNNLIKEMCLNSFEAESKVVDWIFEKGELDFL 355
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQ 117
++++ N+ IGLE LF E W + I K +FF R Y
Sbjct: 356 PKAVINEFLKNRFNKSLEAIGLEKLFDIDEALLQETEWFDDEIIGTKHGDFFVKRSINYS 415
Query: 118 QGAE 121
+ +
Sbjct: 416 KRTQ 419
>gi|21244791|ref|NP_644373.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
axonopodis pv. citri str. 306]
gi|325927516|ref|ZP_08188754.1| ribonucleotide reductase, beta subunit [Xanthomonas perforans
91-118]
gi|21110489|gb|AAM38909.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
axonopodis pv. citri str. 306]
gi|325542109|gb|EGD13613.1| ribonucleotide reductase, beta subunit [Xanthomonas perforans
91-118]
Length = 347
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++I I EN L E A LE + E + G G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
+Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337
>gi|225850104|ref|YP_002730338.1| ribonucleoside-diphosphate reductase, beta subunit [Persephonella
marina EX-H1]
gi|225645787|gb|ACO03973.1| ribonucleoside-diphosphate reductase, beta subunit [Persephonella
marina EX-H1]
Length = 329
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKE-FQQKSRTMLHEATLLEIAYAHETMPKGF-VGL 60
DESLHL GI+ I I ENP + E F + + + +A LE+ Y G+
Sbjct: 212 DESLHLQNGIEAILTIVEENPEIVDDEKFVENIKETIIDAVELELNYLKTKFGGTTIFGV 271
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
+ E+YM++IA+RR ++G +P FK +NP ++ + D+KK NFFE TEY
Sbjct: 272 SYKELEKYMKYIADRRLEELGFDPQFKIDQNPLKFLQKE-DVKKLTNFFEVSSTEY 326
>gi|166710317|ref|ZP_02241524.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
oryzae pv. oryzicola BLS256]
Length = 347
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++I I EN L E A LE + E + G G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAINLETQWTAEVL-DGIDGID 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
+Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337
>gi|188578920|ref|YP_001915849.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|188523372|gb|ACD61317.1| ribonucleoside-diphosphate reductase, beta subunit [Xanthomonas
oryzae pv. oryzae PXO99A]
Length = 347
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++I I EN L E A LE + E + G G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
+Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337
>gi|157375444|ref|YP_001474044.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
sediminis HAW-EB3]
gi|157317818|gb|ABV36916.1| Ribonucleoside-diphosphate reductase [Shewanella sediminis HAW-EB3]
Length = 376
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLEIAYAHETMPK-G 56
RDE+LHL+ ++ N E Q+ R + + E +A
Sbjct: 237 RDEALHLSGTQHILKLWANGNDDPEMVEVCQELREAGRQVFLDVVEQEKEWADYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLNA +QY+++I+N R IG E F NP PW++ + + E+ +T
Sbjct: 297 MIGLNAEILKQYIEYISNNRMEAIGYEAPFAIKNNPLPWINTYLVSDNVQVAPQESEITS 356
Query: 116 Y---QQGAELKWD 125
Y Q A + D
Sbjct: 357 YLVGQVDATVSDD 369
>gi|58580098|ref|YP_199114.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
oryzae pv. oryzae KACC10331]
gi|84622097|ref|YP_449469.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
oryzae pv. oryzae MAFF 311018]
gi|58424692|gb|AAW73729.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae
pv. oryzae KACC10331]
gi|84366037|dbj|BAE67195.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae
pv. oryzae MAFF 311018]
Length = 347
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++I I EN L E A LE + E + G G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL-DGIDGID 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
+Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337
>gi|188996383|ref|YP_001930634.1| Ribonucleoside-diphosphate reductase [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931450|gb|ACD66080.1| Ribonucleoside-diphosphate reductase [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 326
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKGF-VGL 60
DESLHL GI+ I + ENP + +F + R + +A LE+ Y G+
Sbjct: 209 DESLHLQNGIEAILTMVEENPEIVDDYQFVENIRQSIIDAVELELNYLKTKFGGTTIFGV 268
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
+ E+YM++IA+RR ++G +P F +NP ++ + D+KK NFFE TEY
Sbjct: 269 SYGELERYMKYIADRRLIELGFDPQFGIDQNPLKFLQKE-DVKKLTNFFEVSSTEY 323
>gi|325919223|ref|ZP_08181270.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
19865]
gi|325923021|ref|ZP_08184721.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
19865]
gi|325546491|gb|EGD17645.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
19865]
gi|325550297|gb|EGD21104.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
19865]
Length = 347
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++I I EN L + A LE + E + G G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
+Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337
>gi|109898789|ref|YP_662044.1| ribonucleotide-diphosphate reductase subunit beta
[Pseudoalteromonas atlantica T6c]
gi|109701070|gb|ABG40990.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Pseudoalteromonas atlantica T6c]
Length = 376
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWTK--EFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++P + E+++++ + +A E +A
Sbjct: 237 RDENLHLTSTQHILNLWAKGKDDPEMAEIALEYKEEATNIFLDAVNQEKEWAEYLFQNGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY++FIAN R IGL+ F NP PWM+ ++ + E+ ++
Sbjct: 297 MIGLNKDILCQYVEFIANHRMSAIGLDQPFDIKNNPLPWMNNYLNSDNVQVAPQESEISS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|172036555|ref|YP_001803056.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
ATCC 51142]
gi|171698009|gb|ACB50990.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
ATCC 51142]
Length = 352
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ +I + + PH ++ M A E + + + +G+
Sbjct: 224 RDELSHVRLYQKLIPEARKVFPH-----SVEQIYEMFDMAVNYECRWTNHIVGNNILGIT 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114
S E+Y +++AN R IGLEPL+ Y ++P+ + D KK + NFFE VT
Sbjct: 279 ESSTEKYTKYLANIRLRSIGLEPLYPEPKYNKSPYTHLERFSDTKKEAHTKANFFEATVT 338
Query: 115 EYQQGAELK-WD 125
Y + + WD
Sbjct: 339 SYVMSSGVTGWD 350
>gi|120598753|ref|YP_963327.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
W3-18-1]
gi|146293170|ref|YP_001183594.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
putrefaciens CN-32]
gi|120558846|gb|ABM24773.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Shewanella sp. W3-18-1]
gi|145564860|gb|ABP75795.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Shewanella putrefaciens CN-32]
gi|319426318|gb|ADV54392.1| ribonucleotide reductase [Shewanella putrefaciens 200]
Length = 376
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN ++N ++ ++P + + QQ++ + +A E +A
Sbjct: 237 RDEALHLNSTQHILNIMQGGKDDPEMGEIAAQCQQEAYDLFLKAAEQEKEWAKYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY++FI N+R + L + + NP PWM ++ + E V+
Sbjct: 297 MIGLNEQILCQYVEFITNQRMKSVNLPQPYPESTNPLPWMKNWLESDAVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q + + D
Sbjct: 357 YLVGQIDSAVDGD 369
>gi|325914792|ref|ZP_08177129.1| ribonucleotide reductase, beta subunit [Xanthomonas vesicatoria
ATCC 35937]
gi|325538985|gb|EGD10644.1| ribonucleotide reductase, beta subunit [Xanthomonas vesicatoria
ATCC 35937]
Length = 349
Score = 84.2 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++I I EN L + A LE + E + G G++
Sbjct: 221 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
+Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++
Sbjct: 280 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 339
>gi|66770372|ref|YP_245134.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
campestris pv. campestris str. 8004]
gi|188993572|ref|YP_001905582.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
campestris pv. campestris str. B100]
gi|66575704|gb|AAY51114.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
campestris pv. campestris str. 8004]
gi|167735332|emb|CAP53546.1| Ribonucleoside-diphosphate reductase beta chain [Xanthomonas
campestris pv. campestris]
Length = 347
Score = 84.2 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++I I EN L + A LE + E + G G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
+Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337
>gi|257462865|ref|ZP_05627271.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
D12]
Length = 348
Score = 84.2 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ +I +IK +++ R M A EI + + +G+
Sbjct: 220 RDELSHVVLFQKIIREIKA---ENHNFFEEEEIRAMFRTAVEQEILWTEHIIGNRILGIT 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ E Y +++AN R IGL P++ ++T+NP+ + D + + NFFE VT Y
Sbjct: 277 TETTEAYTKWLANERLRTIGLAPMYEEFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSY 336
Query: 117 QQGAELK-WD 125
+ + WD
Sbjct: 337 NMSSSIDGWD 346
>gi|21233407|ref|NP_639324.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|21115247|gb|AAM43206.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
campestris pv. campestris str. ATCC 33913]
Length = 347
Score = 83.8 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++I I EN L + A LE + E + G G++
Sbjct: 219 RDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 277
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
+Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++
Sbjct: 278 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 337
>gi|296316020|ref|YP_003662484.1| ribonucleotide reductase subunit 2 [Bovine herpesvirus 5]
gi|40456143|gb|AAR86121.1| UL40 ribonucleotide reductase small subunit [Bovine herpesvirus 5]
Length = 315
Score = 83.8 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 6/123 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + + R + EA +E + P+G L+
Sbjct: 198 RDEAVHTTASCCIFNNYLGGE-----RPPPDRVRKLFREAVEIEREFIWSRAPRGSHILD 252
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y+++ A+R I L PLF + ++ +K NFFE R T Y G
Sbjct: 253 VEAISAYVEYSADRLLAAIHLPPLFGTPPPGTDFPLALMTAEKHTNFFERRSTTY-TGTV 311
Query: 122 LKW 124
+
Sbjct: 312 IND 314
>gi|118500933|gb|ABK97635.1| ribonucleoside diphosphate reductase beta subunit [Allochromatium
vinosum DSM 180]
Length = 280
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 54/81 (66%), Positives = 65/81 (80%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H+NFGIDVINQIKIENPHLWT +F+Q+ M+ EA LE YAH+TMP+G +GL
Sbjct: 200 LRDESMHMNFGIDVINQIKIENPHLWTPDFRQELVGMIREAVELEARYAHDTMPRGVLGL 259
Query: 61 NAPSCEQYMQFIANRRCHQIG 81
NA E Y+ FIANRRC QIG
Sbjct: 260 NAQMFEDYLHFIANRRCAQIG 280
>gi|269866968|ref|XP_002652448.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220062479|gb|EED41609.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 100
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 34 SRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF 93
+ ++ EA +E + E++P +G+N QY++F+A+R +G + ++ + NPF
Sbjct: 1 MKDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPF 59
Query: 94 PWMSEVIDLKKEKNFFETRVTEYQQG 119
+M E I L+ + NFFE R YQ+G
Sbjct: 60 DFM-ENISLQGKTNFFERREANYQKG 84
>gi|162849254|emb|CAN10143.1| Ribonucleotide reductase small subunit [African swine fever virus
Benin 97/1]
Length = 327
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK---GFV 58
RDE +H +F +I+ P ++ +L EA L + + K
Sbjct: 196 RDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFINYAFDKARGRVP 249
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117
G + QY+++ + C + + ++K NPFP M++ ++ ++ NFFE R T+YQ
Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMMQCKSIYKVG-NPFPQMTKFFLNEVEKTNFFELRPTQYQ 308
>gi|289664735|ref|ZP_06486316.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
campestris pv. vasculorum NCPPB702]
Length = 349
Score = 83.8 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++I I EN L E A LE + E + G G++
Sbjct: 221 RDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETVWTAEVL-DGIDGID 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 118
+Y+++ AN+ +G+E L++ +N PW+ D + + +FFE R Y++
Sbjct: 280 VDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFEMRNASYKK 339
>gi|162849427|emb|CAN10392.1| Ribonucleotide reductase small subunit [African swine fever virus
OURT 88/3]
gi|291289488|emb|CBH29145.1| BA71V-F334L [African swine fever virus E75]
gi|303398729|emb|CBW46710.1| F334L [African swine fever virus Georgia 2007/1]
Length = 334
Score = 83.8 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK---GFV 58
RDE +H +F +I+ P ++ +L EA L + + K
Sbjct: 203 RDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFINYAFDKARGRVP 256
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117
G + QY+++ + C + + ++K NPFP M++ ++ ++ NFFE R T+YQ
Sbjct: 257 GFSKEMLFQYIRYFTDNLCFMMQCKSIYKVG-NPFPQMTKFFLNEVEKTNFFELRPTQYQ 315
>gi|119485472|ref|ZP_01619800.1| hypothetical protein L8106_10031 [Lyngbya sp. PCC 8106]
gi|119457228|gb|EAW38354.1| hypothetical protein L8106_10031 [Lyngbya sp. PCC 8106]
Length = 359
Score = 83.8 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ +I + PH ++ M A E + + + + +G+
Sbjct: 231 RDELSHVRLYQKLIPEAMQTFPH-----SVEQIYEMFDTAVQHECRWTNHIVGRNILGIT 285
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114
S EQY +++AN R IGL+PL+ Y+++P+ + D KK + NFFE VT
Sbjct: 286 ETSTEQYTKYLANARLRSIGLKPLYTDPRYSKSPYTHLERFSDTKKEAHTKANFFEASVT 345
Query: 115 EYQQ-GAELKWD 125
Y WD
Sbjct: 346 SYVMSSGVGGWD 357
>gi|317060491|ref|ZP_07924976.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
sp. D12]
gi|313686167|gb|EFS23002.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
sp. D12]
Length = 344
Score = 83.8 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ +I +IK +++ R M A EI + + +G+
Sbjct: 216 RDELSHVVLFQKIIREIKA---ENHNFFEEEEIRAMFRTAVEQEILWTEHIIGNRILGIT 272
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK----EKNFFETRVTEY 116
+ E Y +++AN R IGL P++ ++T+NP+ + D + + NFFE VT Y
Sbjct: 273 TETTEAYTKWLANERLRTIGLAPMYEEFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSY 332
Query: 117 QQGAELK-WD 125
+ + WD
Sbjct: 333 NMSSSIDGWD 342
>gi|89092731|ref|ZP_01165684.1| ribonucleotide-diphosphate reductase beta subunit [Oceanospirillum
sp. MED92]
gi|89083243|gb|EAR62462.1| ribonucleotide-diphosphate reductase beta subunit [Oceanospirillum
sp. MED92]
Length = 376
Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N + ++P KE +Q + EA E +A
Sbjct: 237 RDEALHLTGTQHMLNIMASGADDPDYKDIAKECEQDVYNIFKEAAQQEKDWAQYLFREGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLNA Y+++I N R + LE +F +NP PWM+ + + E ++
Sbjct: 297 MIGLNAQILSDYVEYITNVRMKALNLEEIFPARQNPLPWMNAWLVSDNVQVAPQEAEISS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|118602534|ref|YP_903749.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)]
gi|118567473|gb|ABL02278.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Candidatus Ruthia magnifica str. Cm (Calyptogena
magnifica)]
Length = 378
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + L +KE Q + TM EA E +A
Sbjct: 237 RDEALHLTGTQHMLNLMSSGKDDLDMQKISKECQDEVITMFREACEQEKDWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLNA +QY+++I N R + L +F NP PW++ +D + ET +T
Sbjct: 297 MIGLNAQILKQYLEYITNVRMKALNLSLIFDECTNPLPWINHWLDSDNVQVAPQETEITS 356
Query: 116 Y 116
Y
Sbjct: 357 Y 357
>gi|307151334|ref|YP_003886718.1| ribonucleotide reductase [Cyanothece sp. PCC 7822]
gi|306981562|gb|ADN13443.1| ribonucleotide reductase [Cyanothece sp. PCC 7822]
Length = 355
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ +I + PH K M A E + + + +G+
Sbjct: 227 RDELSHVRLYQKIIAEAMQTFPH-----SVDKVYEMFDTAVHHECRWTNHIVGDNILGIT 281
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114
S EQY +++AN R IGL+PL+ KY ++P+ + D KK + NFFE VT
Sbjct: 282 ESSTEQYTKYLANIRLKAIGLKPLYADEKYQKSPYSHLERFSDTKKDAHTKANFFEATVT 341
Query: 115 EYQQGAELK-WD 125
Y + + WD
Sbjct: 342 SYVMSSGVTGWD 353
>gi|115691069|ref|XP_001203692.1| PREDICTED: similar to ribonuleotide reductase small subunit,
partial [Strongylocentrotus purpuratus]
gi|115735426|ref|XP_798682.2| PREDICTED: similar to ribonuleotide reductase small subunit,
partial [Strongylocentrotus purpuratus]
Length = 258
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 31/122 (25%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + HL + + ++ +A LE Y E +P +G+N
Sbjct: 165 RDEGLHCDFACLLFS-------HLNHPTPVSRIQEIIRDAVRLEEEYLSEALPVALIGMN 217
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A QY+QF+A+R ++ + NFFE RV EYQ+
Sbjct: 218 ARLMCQYIQFVADRLLMEL------------------------KSNFFEKRVGEYQKMNV 253
Query: 122 LK 123
+
Sbjct: 254 MT 255
>gi|166367085|ref|YP_001659358.1| ribonucleoside-diphosphate reductase beta chain [Microcystis
aeruginosa NIES-843]
gi|166089458|dbj|BAG04166.1| ribonucleoside-diphosphate reductase beta chain [Microcystis
aeruginosa NIES-843]
Length = 283
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ +I + H ++ M A E + + + +G+
Sbjct: 155 RDELSHVRLYQKLIPEAMATFSH-----SVEQIYEMFDTAVKHECRWTNHIVGNDILGIT 209
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVT 114
S EQY +++AN R IGLEPL+ KY ++P+ + D KK + NFFE VT
Sbjct: 210 EYSTEQYTKYLANIRLKAIGLEPLYREEKYNKSPYNHLERFSDTKKEGHTKANFFEATVT 269
Query: 115 EYQQGAELK-WD 125
Y + L WD
Sbjct: 270 SYVMSSGLTGWD 281
>gi|218442220|ref|YP_002380549.1| ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 7424]
gi|218174948|gb|ACK73681.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 7424]
Length = 355
Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ +I + PH ++ M A E + + + +G+
Sbjct: 227 RDELSHVRLYQRIIVEAMETFPH-----SVEQIYEMFDTAVQHECRWTNHIVGDNILGIT 281
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK----EKNFFETRVT 114
S EQY +++AN R + IGL+PL++ Y ++P+ + D KK + NFFE VT
Sbjct: 282 ESSTEQYTKYLANHRLNTIGLKPLYEDEKYKKSPYSHLERFSDTKKDAHTKANFFEATVT 341
Query: 115 EYQQGAELK-WD 125
Y + + WD
Sbjct: 342 SYVMSSGVTGWD 353
>gi|332174213|gb|AEE23467.1| Ribonucleoside-diphosphate reductase [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 376
Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++P + E++Q++ + +A E +A
Sbjct: 237 RDENLHLTSTQHILNLWAKGKDDPEMAEIAIEYKQQATDIFLDAVNQEKEWAEYLFQNGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY++FIAN R IGL F NP PWM+ ++ + E+ ++
Sbjct: 297 MIGLNKDILCQYVEFIANHRMSAIGLGQPFDIKNNPLPWMNNYLNSDNVQVAPQESEISS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|88801048|ref|ZP_01116596.1| ribonucleotide-diphosphate reductase beta subunit [Reinekea sp.
MED297]
gi|88776187|gb|EAR07414.1| ribonucleotide-diphosphate reductase beta subunit [Reinekea sp.
MED297]
Length = 369
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWTKEFQQK--SRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL+ ++ Q ++P + +++ R + +A E A+A+
Sbjct: 230 RDEALHLSGTEFILRQWLHGGDDPQMQIVADEEQATIRQIFEDAAEQEKAWANYLFNDGS 289
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLNA QY++++ ++R + L P++ +NP PWM + + E ++
Sbjct: 290 MIGLNAEILHQYIEYLTDQRLDALSLSPIYGRRDNPLPWMDNWVSNDHVQVAPQEVEISS 349
Query: 116 YQQGAELKW 124
Y GA
Sbjct: 350 YLVGAIRSD 358
>gi|3183695|emb|CAA07027.1| ribonucleotide reductase small subunit [Felid herpesvirus 1]
Length = 331
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 13/127 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N K ++ ++ EA LE + P+ LN
Sbjct: 213 RDEAIHTTASCCIYNNYL----PAQIKPSTERIHSLFREAVELECEFISTCAPRCSNLLN 268
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK----YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
Y+++ A+R I + P+F + P +M ++K NFFE T Y
Sbjct: 269 VADICNYVRYSADRLLGIIKVAPIFNVPPPHPNFPLAFMV----IEKHTNFFEKHSTTYS 324
Query: 118 QGAELKW 124
G +
Sbjct: 325 -GTVIND 330
>gi|261868068|ref|YP_003255990.1| ribonucleoside-diphosphate reductase subunit beta [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|293389919|ref|ZP_06634253.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|261413400|gb|ACX82771.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|290950453|gb|EFE00572.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 329
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF-VGL 60
++E +H FGI + + ++ E P L+T EF + + + +A E A G L
Sbjct: 198 KEEEIHGRFGISLYHLLREEQPELFTDEFYAELKELAEQAFNAEKAILDWIFEDGELSFL 257
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
+ + E Y+ N +GLEP++ + W I KE +FF R T+Y
Sbjct: 258 SKATVENYIANRYNNSLVTLGLEPIYNISPAQLKETEWFDIEILSTKETDFFNKRSTDYS 317
Query: 118 Q 118
+
Sbjct: 318 K 318
>gi|297265423|ref|XP_001091447.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Macaca
mulatta]
Length = 704
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 37 MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
+ + L +G+N +QY++F+A+R ++G +F ENPF +M
Sbjct: 607 ISRDEVSLNQIIGXXXXXXXXIGMNCTLMKQYIEFVADRLMLELGFSKVF-RVENPFDFM 665
Query: 97 SEVIDLKKEKNFFETRVTEYQQGAELK 123
E I L+ + NFFE RV EYQ+ +
Sbjct: 666 -ENISLEGKTNFFEKRVGEYQRMGVMS 691
>gi|323145837|gb|ADX32078.1| hypothetical protein [Pseudomonas phage P3_CHA]
gi|323146023|gb|ADX32263.1| hypothetical protein [Pseudomonas phage PAK_P3]
Length = 344
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVGLN 61
DE+ H+ I V+ ++ + Q+ R ++ + E+ Y K L
Sbjct: 207 DETDHVEKNIRVLKAMRKDLTPEENSILDQEIRYLIEDYREAEVKYLVLAFEKGPQHDLT 266
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+Y+ ++ R + L + ENP PWM +I+ + NFFE +VT+Y ++
Sbjct: 267 FEQTVEYIDYLCRLRLFECELLKEHQVGENPLPWMEWMINAARHDNFFEKKVTDYSH-SK 325
Query: 122 LKWD 125
L D
Sbjct: 326 LSGD 329
>gi|327198239|ref|YP_004306815.1| putative ribonucleotide reductase B subunit [Pseudomonas phage
KPP10]
gi|297591765|dbj|BAJ09185.1| putative ribonucleotide reductase B subunit [Pseudomonas phage
KPP10]
Length = 339
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVGLN 61
DE+ H+ I V+ ++ + Q+ R ++ + E+ Y K L
Sbjct: 202 DETDHVEKNIRVLKAMRKDLTPEENAILDQEIRYLIEDYREAEVKYLVLAFEKGPQHDLT 261
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+Y+ ++ R + L + ENP PWM +I+ + NFFE +VT+Y ++
Sbjct: 262 FEQTVEYIDYLCRLRLFECELLKEHQVGENPLPWMEWMINAARHDNFFEKKVTDYSH-SK 320
Query: 122 LKWD 125
L D
Sbjct: 321 LSGD 324
>gi|9628152|ref|NP_042738.1| ribonucleotide reductase small subunit [African swine fever virus]
gi|1172939|sp|P42492|RIR2_ASFB7 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|780414|gb|AAA65274.1| ribonucleotide reductase small subunit [African swine fever virus]
gi|1097433|prf||2113434AT ribonucleotide reductase:SUBUNIT=small
Length = 334
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK---GFV 58
RDE +H +F +I+ P ++ +L EA L + + K
Sbjct: 203 RDEGVHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFINYAFDKARGRVP 256
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117
G + QY+++ + C + + ++K NPFP M++ ++ ++ NFFE R T+YQ
Sbjct: 257 GFSKEMLFQYIRYFTDNLCFMMQCKSIYKVG-NPFPQMTKFFLNEVEKTNFFELRPTQYQ 315
>gi|149369595|ref|ZP_01889447.1| ribonucleoside-diphosphate reductase, beta subunit [unidentified
eubacterium SCB49]
gi|149357022|gb|EDM45577.1| ribonucleoside-diphosphate reductase, beta subunit [unidentified
eubacterium SCB49]
Length = 424
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGL 60
++E +H +FGID+I +K E+P +T E+ + + + +A E+ L
Sbjct: 293 KEEQIHGDFGIDLILILKDEHPEWFTPEYHENIKRLCLDAYEAEVDLVDWIFEEGELDFL 352
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQ 117
++++ N+ IG+E +F E W + I K +FF R Y
Sbjct: 353 PKTVINEFLKNRFNKSLESIGVEKVFDVDEALVIQTEWFDDEIIGTKHGDFFVKRSVNYS 412
Query: 118 QGAE 121
+ +
Sbjct: 413 KRTQ 416
>gi|163803511|ref|ZP_02197381.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. AND4]
gi|159172687|gb|EDP57538.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. AND4]
Length = 377
Score = 81.9 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSR----TMLHEATLLEIAYAHETMPK-G 56
RDESLHLN +IN ++ + ++ + + EA E +A
Sbjct: 237 RDESLHLNGTQHMINLLRNGQDDFIFMQIAEEVKQECFDLFKEAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL + T NP PW++ + + E ++
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPKAYPEATTNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|87120532|ref|ZP_01076426.1| ribonucleotide-diphosphate reductase beta subunit [Marinomonas sp.
MED121]
gi|86164175|gb|EAQ65446.1| ribonucleotide-diphosphate reductase beta subunit [Marinomonas sp.
MED121]
Length = 377
Score = 81.9 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + KE + ++ + EA E +A
Sbjct: 238 RDEALHLTGTQHILNLMASGKDDPEMEDIAKECEDEAYQIFFEAAEQEKEWASYLFKDGS 297
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLNA QY+++I N R IGL P F+ NP PW++ + + E ++
Sbjct: 298 MIGLNAQILGQYVEYITNIRMQAIGLLPTFETKHNPIPWINAWLVSDNVQVAPQEAEISS 357
Query: 116 YQQG 119
Y G
Sbjct: 358 YLVG 361
>gi|215275540|sp|P0C8I2|RIR2_ASFWA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
Length = 327
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK---GFV 58
RDE +H +F +I+ P ++ +L EA L + K
Sbjct: 196 RDEGVHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFISYAFDKARGRVP 249
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117
G + QY+++ + C + + ++K NPFP M++ ++ ++ NFFE R T+YQ
Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMMQCKSIYKVG-NPFPQMTKFFLNEVEKTNFFELRPTQYQ 308
>gi|94499220|ref|ZP_01305758.1| ribonucleotide-diphosphate reductase beta subunit [Oceanobacter sp.
RED65]
gi|94428852|gb|EAT13824.1| ribonucleotide-diphosphate reductase beta subunit [Oceanobacter sp.
RED65]
Length = 376
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++ ++P + E +++ + EA E +A
Sbjct: 237 RDEALHLTGTQHMMQIWALGKDDPEMGEIANECKKQVIEIFREAAQQEKDWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N+R IGL+ +F+ +NP PW++ + + E ++
Sbjct: 297 MIGLNKDILCQYVEYITNQRLGAIGLDNIFETRQNPIPWINAWLVSDNVQVAPQEAEISS 356
Query: 116 YQQGA 120
Y GA
Sbjct: 357 YLVGA 361
>gi|12642668|gb|AAK00340.1| ribonucleotide reductase small subunit [Bovine herpesvirus 2]
Length = 313
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N +P K + R + EA +EIA+ MP+ L+
Sbjct: 192 RDEAVHTTASCCIYNNYIGAHP----KPPPTRVRQLFLEAVDIEIAFIRAKMPRDGQVLS 247
Query: 62 A---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
S E Y++F A+R IG +PLF + ++ K NFFE R T Y
Sbjct: 248 ESAVASIENYVRFSADRLLCLIGDQPLFNAPPPDANFPLRLMSTDKHTNFFECRSTAYA- 306
Query: 119 GAELKW 124
GA +
Sbjct: 307 GAVVND 312
>gi|294955280|ref|XP_002788462.1| ribonucleoside-diphosphate reductase small chain, putative
[Perkinsus marinus ATCC 50983]
gi|239903931|gb|EER20258.1| ribonucleoside-diphosphate reductase small chain, putative
[Perkinsus marinus ATCC 50983]
Length = 157
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 37 MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
+ + A +E + + +P G +G+NA +Y++F+A+R +G ++ NPF WM
Sbjct: 34 IKNSAVNVEREFITDALPVGLIGMNAELMGRYIEFVADRLLVALGYAKIYNSA-NPFDWM 92
Query: 97 SEVIDLKKEKNFFETRVT 114
+ +I L+ + NFFE RV
Sbjct: 93 T-MISLQGKTNFFEKRVG 109
>gi|270339459|ref|YP_003331539.1| ribonucleotide reductase subunit 2 [Felid herpesvirus 1]
gi|254940175|gb|ACT88318.1| ribonucleotide reductase subunit 2 [Felid herpesvirus 1]
Length = 331
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 13/127 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N K ++ ++ EA LE + P+ LN
Sbjct: 213 RDEAIHTTASCCIYNNYL----PAQIKPSTERIHSLFREAVELECEFISTCAPRCSNLLN 268
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK----YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
Y+++ A+R I + P+F + + P +M ++K NFFE T Y
Sbjct: 269 VADICNYVRYSADRLLGIIKVAPIFNVPPPHPDFPLAFMV----IEKHTNFFERHSTTYS 324
Query: 118 QGAELKW 124
G +
Sbjct: 325 -GTVIND 330
>gi|255683173|ref|YP_003084381.1| UL40 [Duck enteritis virus]
gi|158343199|gb|ABW35292.1| ribonucleotide reductase subunit 2 [Anatid herpesvirus 1]
gi|208401182|gb|ACI26683.1| UL40 [Anatid herpesvirus 1]
gi|254839988|gb|ACT83534.1| UL40 [Anatid herpesvirus 1]
Length = 355
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 5/123 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N+ + K + + EA LE + P ++
Sbjct: 237 RDETIHTKASCVIYNKHLQKY----KKPSTCRIYKLFSEAVKLECEFLRARAPSDSAIID 292
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y++F A+R IGL PLF + + ++ NFFE R T Y G+
Sbjct: 293 TEAICSYVRFNADRLLSDIGLAPLFDEPPPKHDFPLAFMATSQQTNFFERRNTTYA-GSV 351
Query: 122 LKW 124
L
Sbjct: 352 LND 354
>gi|16332312|ref|NP_443040.1| hypothetical protein slr0591 [Synechocystis sp. PCC 6803]
gi|1653942|dbj|BAA18852.1| slr0591 [Synechocystis sp. PCC 6803]
Length = 355
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 13/132 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ +I + H + M +A E + + + +G+
Sbjct: 227 RDELSHVRLYQKLIPEAMQVFTH-----STDQIYEMFDKAVEFECRWTNHIVGNNILGIT 281
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKK----EKNFFETRVT 114
S EQY +++AN R IGL+PL+ ++P+ + D KK + NFFE VT
Sbjct: 282 ESSTEQYTKYLANSRLRAIGLDPLYTDARYGKSPYTHLERFSDTKKEAHTKANFFEATVT 341
Query: 115 EYQQGAELK-WD 125
Y + + WD
Sbjct: 342 SYVMSSGVSGWD 353
>gi|215275539|sp|P0C8I1|RIR2_ASFP4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
Length = 327
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 11/120 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK---GFV 58
RDE +H +F +I+ P +L EA L + + K
Sbjct: 196 RDEGVHCSFACFLISNYVYNIPEERI------IHKILKEAVELVDEFINYAFDKARGRVP 249
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKEKNFFETRVTEYQ 117
G + QY+++ + C + + ++K NPFP M++ ++ ++ NFFE R T+YQ
Sbjct: 250 GFSKEMLFQYIRYFTDNLCFMMQCKSIYKVG-NPFPQMTKFFLNEVEKTNFFELRPTQYQ 308
>gi|38638230|ref|NP_944413.1| ribonucleotide reductase subunit 2 [Psittacid herpesvirus 1]
gi|81987371|sp|Q6UDJ1|RIR2_PSHV1 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|34500236|gb|AAQ73719.1| unknown [Psittacid herpesvirus 1]
Length = 313
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N +P K ++ + EA +E + PK ++
Sbjct: 195 RDETIHTTASCCIYNNWLKGHP----KPSVKRIHQLFKEAVEIECDFLVARAPKAARLID 250
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ + +++F ANR IG+ ++ +P + ++ L+K NFFE R T Y
Sbjct: 251 IDAIQSFVRFTANRWLSMIGVPTIYDDPAPDP-TFPLALMSLEKNVNFFEHRSTAYS 306
>gi|319790519|ref|YP_004152152.1| ribonucleotide reductase [Thermovibrio ammonificans HB-1]
gi|317115021|gb|ADU97511.1| ribonucleotide reductase [Thermovibrio ammonificans HB-1]
Length = 352
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 7/129 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ + + E + K M A E ++ + + +G+N
Sbjct: 224 RDELTHVILFEHFMKDLTDE--GFKKYLTKDKIYDMFRIAVDQEQRFSKKVIGNKILGMN 281
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID----LKKEKNFFETRVTEYQ 117
S E Y +IAN+R +GLEP+F NP+ + + D + NFFE VT Y
Sbjct: 282 EQSIEDYTFYIANKRLKALGLEPIFPDRGNPYEHLERIADTGGEANVKANFFEATVTSYN 341
Query: 118 QGAELK-WD 125
Q ++ WD
Sbjct: 342 QANAVEGWD 350
>gi|315126539|ref|YP_004068542.1| ribonucleotide-diphosphate reductase subunit beta
[Pseudoalteromonas sp. SM9913]
gi|315015053|gb|ADT68391.1| ribonucleotide-diphosphate reductase subunit beta
[Pseudoalteromonas sp. SM9913]
Length = 376
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL+ ++N ++ ++P + + ++++ M +A E +A
Sbjct: 237 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCREEAIKMFVDAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R IGL F NP PW++ + + E ++
Sbjct: 297 MIGLNKHILCQYVEYITNARMTAIGLPAQFDNNSNPIPWINSWLVSDNVQVAPQEAEISS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|308049658|ref|YP_003913224.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Ferrimonas balearica DSM 9799]
gi|307631848|gb|ADN76150.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Ferrimonas balearica DSM 9799]
Length = 378
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 55/121 (45%), Gaps = 6/121 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57
RDE LHL +IN + ++P + E +S + A E A+A G
Sbjct: 239 RDEQLHLVGTQHMINLMADGRDDPEMAEIAIECHSESIEIFRRAAEQEKAWASYLFKDGS 298
Query: 58 V-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+ GLN E Y++FI N R IGL PLF NP PWMS ++ + E V+
Sbjct: 299 MLGLNKQIIEDYVEFITNERMAGIGLPPLFDKRSNPLPWMSTWLESDTVQVAPQEVEVSS 358
Query: 116 Y 116
Y
Sbjct: 359 Y 359
>gi|122921307|pdb|2O1Z|A Chain A, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
(Pv086155)
gi|122921308|pdb|2O1Z|B Chain B, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
(Pv086155)
Length = 311
Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + P + + ++ EA +E ++ E++P +G+N
Sbjct: 223 RDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICESLPCDLIGMN 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
+ QY++F+A+R +G +F + +NPF WM
Sbjct: 276 SRLMSQYIEFVADRLLECLGSPKIF-HAKNPFNWMD 310
>gi|172058301|ref|YP_001814761.1| ribonucleotide-diphosphate reductase subunit beta [Exiguobacterium
sibiricum 255-15]
gi|171990822|gb|ACB61744.1| Ribonucleoside-diphosphate reductase [Exiguobacterium sibiricum
255-15]
Length = 347
Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
RDE H F ++ + E+P + F + A LEI ++ + + GL
Sbjct: 217 RDELQHSYFISQLLRAVLTEHPDIDADGSFTKFVYATFERAVDLEIEWSEYVL-RDLDGL 275
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID---LKKEKNFFETRVTEY 116
+ Y++++AN+R IGL+ L++ + E+ PW+ D + +FFE + Y
Sbjct: 276 DVSEMRDYVKYLANKRLRVIGLDDLYEGHDEDVMPWIRAYSDDSMNATKSDFFEQKSRSY 335
Query: 117 QQ 118
+
Sbjct: 336 AK 337
>gi|71065825|ref|YP_264552.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter
arcticus 273-4]
gi|71038810|gb|AAZ19118.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Psychrobacter arcticus 273-4]
Length = 377
Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++I ++P + KE ++S + +A E +A
Sbjct: 237 RDEALHLTGTQHILNLMRIGRDDPEMVDIAKECYEESIEIFRKAAEQEKEWAGYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F ++ NP PW++ + + ET ++
Sbjct: 297 MIGLNKDILCQYIEYITNLRMEAVGLPVAFPKSKSNPIPWINTWLSSDNVQVAPQETEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|93005945|ref|YP_580382.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter
cryohalolentis K5]
gi|92393623|gb|ABE74898.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Psychrobacter cryohalolentis K5]
Length = 377
Score = 81.2 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++I ++P + KE ++S + +A E +A
Sbjct: 237 RDEALHLTGTQHILNLMRIGRDDPEMVDIAKECYEESIEIFRKAAEQEKEWAGYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F ++ NP PW++ + + ET ++
Sbjct: 297 MIGLNKDILCQYIEYITNLRMEAVGLPVAFPNSKSNPIPWINTWLSSDNVQVAPQETEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|226327851|ref|ZP_03803369.1| hypothetical protein PROPEN_01732 [Proteus penneri ATCC 35198]
gi|225203555|gb|EEG85909.1| hypothetical protein PROPEN_01732 [Proteus penneri ATCC 35198]
Length = 376
Score = 81.2 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ ++P + +E +Q+ + EA E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAEECEQECYDLFVEAAEQEKEWAEYLFSEGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ FK NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLKLPFKARSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +++ D
Sbjct: 357 YLVGQIDSQVDTD 369
>gi|227356095|ref|ZP_03840485.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
mirabilis ATCC 29906]
gi|227163740|gb|EEI48652.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
mirabilis ATCC 29906]
Length = 376
Score = 81.2 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ ++P + E +Q+ + EA E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVEAAEQEKEWAEYLFSEGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ FK NP PW++ + + E V+
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLKLPFKARSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +++ D
Sbjct: 357 YLVGQIDSQVDTD 369
>gi|197285594|ref|YP_002151466.1| ribonucleotide-diphosphate reductase subunit beta [Proteus
mirabilis HI4320]
gi|194683081|emb|CAR43612.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
mirabilis HI4320]
Length = 376
Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ ++P + E +Q+ + EA E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVEAAEQEKEWAEYLFSEGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ FK NP PW++ + + E V+
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLKLPFKARSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +++ D
Sbjct: 357 YLVGQIDSQVDTD 369
>gi|90412217|ref|ZP_01220223.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
profundum 3TCK]
gi|90326941|gb|EAS43326.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
profundum 3TCK]
Length = 377
Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQI--KIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + + ++P + +E QQ+ + EA E +A
Sbjct: 237 RDEALHLTGTQHILNLLRGRHDDPEMADIAQECQQECFEIFKEAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL+ + +NP PW++ + + E ++
Sbjct: 297 MIGLNKEILCQYVEYITNLRMKAVGLDQAYPGANQNPIPWINSWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|119944866|ref|YP_942546.1| ribonucleotide-diphosphate reductase subunit beta [Psychromonas
ingrahamii 37]
gi|119863470|gb|ABM02947.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Psychromonas ingrahamii 37]
Length = 381
Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN ++N ++P + E + R + +A E +A
Sbjct: 242 RDEALHLNSTQQILNLWADGKDDPEMAEIAIECFAEGREIFLQAAQQEKDWAKYLFKDGS 301
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++IAN R IG P F+ NP PW++ + + ET ++
Sbjct: 302 MIGLNEQILSQYVEYIANLRMQAIGYAPEFEVKSNPIPWINNWLVSDNVQVAPQETEISS 361
Query: 116 YQQG 119
Y G
Sbjct: 362 YLVG 365
>gi|330829606|ref|YP_004392558.1| ribonucleoside diphosphate reductase 1 subunit beta, ferritin-like
protein [Aeromonas veronii B565]
gi|328804742|gb|AEB49941.1| Ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
protein [Aeromonas veronii B565]
Length = 393
Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E +Q + EA + E +A
Sbjct: 253 RDEALHLTGTQHMLNLMRTGQDDPEMAEIAAECEQACFEIFKEAAIQEKEWAEYLFQDGS 312
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL+P F +NP PW++ + + E V+
Sbjct: 313 MIGLNKDILCQYVEYITNLRMSAVGLQPAFAGTKQNPIPWINTWLSSDNVQVAPQEVEVS 372
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 373 SYLVGQIDSEVNAD 386
>gi|300723737|ref|YP_003713044.1| ribonucleoside-diphosphate reductase 1 subunit beta [Xenorhabdus
nematophila ATCC 19061]
gi|297630261|emb|CBJ90912.1| ribonucleoside-diphosphate reductase 1, beta subunit [Xenorhabdus
nematophila ATCC 19061]
Length = 376
Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + KE +QK + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAKECEQKCYDLFVDAAEQEKEWADYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLKLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|253687496|ref|YP_003016686.1| ribonucleotide reductase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754074|gb|ACT12150.1| ribonucleotide reductase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 376
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E QQ+ + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEISDD 369
>gi|217973230|ref|YP_002357981.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
baltica OS223]
gi|304408853|ref|ZP_07390474.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS183]
gi|307302856|ref|ZP_07582611.1| Ribonucleoside-diphosphate reductase [Shewanella baltica BA175]
gi|217498365|gb|ACK46558.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS223]
gi|304352674|gb|EFM17071.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS183]
gi|306913216|gb|EFN43638.1| Ribonucleoside-diphosphate reductase [Shewanella baltica BA175]
gi|315267707|gb|ADT94560.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS678]
Length = 376
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN +++ ++ ++P + E QQ++ + +A E +A
Sbjct: 237 RDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQEKEWAKYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY++FI N+R + L + NP PWM ++ + E V+
Sbjct: 297 MIGLNEQILCQYVEFITNQRMKSVNLPQPYPEITNPLPWMKNWLESDAVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q + + D
Sbjct: 357 YLVGQIDSAVDGD 369
>gi|227328222|ref|ZP_03832246.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 376
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E QQ+ + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEISDD 369
>gi|227114436|ref|ZP_03828092.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 376
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E QQ+ + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEISDD 369
>gi|153000811|ref|YP_001366492.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
baltica OS185]
gi|160875520|ref|YP_001554836.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
baltica OS195]
gi|151365429|gb|ABS08429.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS185]
gi|160861042|gb|ABX49576.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS195]
Length = 386
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN +++ ++ ++P + E QQ++ + +A E +A
Sbjct: 247 RDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQEKEWAKYLFKDGS 306
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY++FI N+R + L + NP PWM ++ + E V+
Sbjct: 307 MIGLNEQILCQYVEFITNQRMKSVNLPQPYPEITNPLPWMKNWLESDAVQVAPQEVEVSS 366
Query: 116 Y---QQGAELKWD 125
Y Q + + D
Sbjct: 367 YLVGQIDSAVDGD 379
>gi|261822457|ref|YP_003260563.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
wasabiae WPP163]
gi|261606470|gb|ACX88956.1| ribonucleotide reductase [Pectobacterium wasabiae WPP163]
Length = 376
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E QQ+ + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEISDD 369
>gi|157879968|pdb|1RNR|A Chain A, Autocatalytic Generation Of Dopa In The Engineered Protein
R2 F208y From Escherichia Coli Ribonucleotide Reductase
And Crystal Structure Of The Dopa-208 Protein
gi|157879969|pdb|1RNR|B Chain B, Autocatalytic Generation Of Dopa In The Engineered Protein
R2 F208y From Escherichia Coli Ribonucleotide Reductase
And Crystal Structure Of The Dopa-208 Protein
Length = 375
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F NP PW++ + + E V+
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 356 YLVGQIDSEVDTD 368
>gi|76875271|emb|CAI86492.1| ribonucleoside-diphosphate reductase 1, beta subunit
[Pseudoalteromonas haloplanktis TAC125]
Length = 359
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL+ ++N ++ ++P + + + ++ M +A E +A
Sbjct: 220 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQEKEWAEYLFKDGS 279
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R IG FK NP PW++ + + E ++
Sbjct: 280 MIGLNKHILCQYVEYITNARMTAIGFPAQFKNNSNPIPWINSWLVSDNVQVAPQEAEISS 339
Query: 116 YQQG 119
Y G
Sbjct: 340 YLVG 343
>gi|54309624|ref|YP_130644.1| ribonucleotide-diphosphate reductase subunit beta [Photobacterium
profundum SS9]
gi|46914062|emb|CAG20842.1| putative ribonucleoside-diphosphate reductase,beta subunit
[Photobacterium profundum SS9]
Length = 377
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQI--KIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + + ++P + +E QQ+ + EA E +A
Sbjct: 237 RDEALHLTGTQHILNLLRGRHDDPEMADIAQECQQECFDLFKEAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GLE + +NP PW++ + + E ++
Sbjct: 297 MIGLNKEILCQYVEYITNLRMKAVGLEQAYPGANQNPIPWINSWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|332035983|gb|EGI72462.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
[Pseudoalteromonas haloplanktis ANT/505]
Length = 376
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL+ ++N ++ ++P + + + ++ M +A E +A
Sbjct: 237 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R IGL F+ NP PW++ + + E ++
Sbjct: 297 MIGLNKHILCQYVEYITNARMTAIGLPAQFENNSNPIPWINSWLVSDNVQVAPQEAEISS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|494379|pdb|1MRR|A Chain A, Substitution Of Manganese For Iron In Ribonucleotide
Reductase From Escherichia Coli. Spectroscopic And
Crystallographic Characterization
gi|494380|pdb|1MRR|B Chain B, Substitution Of Manganese For Iron In Ribonucleotide
Reductase From Escherichia Coli. Spectroscopic And
Crystallographic Characterization
gi|494553|pdb|1RIB|A Chain A, Structure And Function Of The Escherichia Coli
Ribonucleotide Reductase Protein R2
gi|494554|pdb|1RIB|B Chain B, Structure And Function Of The Escherichia Coli
Ribonucleotide Reductase Protein R2
Length = 375
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F NP PW++ + + E V+
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 356 YLVGQIDSEVDTD 368
>gi|295098106|emb|CBK87196.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 420
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 281 RDEALHLTGTQHMLNLLRSGADDPEMAAIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 340
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 400
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 401 YLVGQIDSEVNTD 413
>gi|161617990|ref|YP_001595470.1| ribonucleotide reductase beta subunit [Enterobacteria phage
phiEcoM-GJ1]
gi|150416409|gb|ABR68787.1| ribonucleotide reductase beta subunit [Enterobacteria phage
phiEcoM-GJ1]
Length = 372
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + E +Q+ + + +A E +A
Sbjct: 233 RDEALHLTGTQHMLNLLASGKDDPEMGEIAAECRQECQKLFEDAAQQEKDWADYLFKDGS 292
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN Y+++I N R +GL+ FK NP PW++ ++ + ET ++
Sbjct: 293 MIGLNKQILCGYVEYITNIRMQAVGLDAPFKGATNPIPWINAWLNSDAVQVAPQETEISS 352
Query: 116 YQQG 119
Y G
Sbjct: 353 YLVG 356
>gi|288549884|ref|ZP_06390831.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
cancerogenus ATCC 35316]
gi|288317051|gb|EFC55989.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
cancerogenus ATCC 35316]
Length = 420
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 281 RDEALHLTGTQHMLNLLRSGTDDPEMAAIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 340
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 400
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 401 YLVGQIDSEVNTD 413
>gi|167623961|ref|YP_001674255.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
halifaxensis HAW-EB4]
gi|167353983|gb|ABZ76596.1| Ribonucleoside-diphosphate reductase [Shewanella halifaxensis
HAW-EB4]
Length = 376
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN ++ ++ ++P + KE +Q + + +A E +A
Sbjct: 237 RDEALHLNSTQHILKIMQGGKDDPEMAEIAKECEQTAIDIFVKAAEQEKEWAKYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R + + NP PWM ++ + E V+
Sbjct: 297 MIGLNETILCQYVEYITNERMKSVNFASPYAEQTNPLPWMKNWLESDSVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q + + D
Sbjct: 357 YLVGQIDSSIDDD 369
>gi|37526941|ref|NP_930285.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|36786374|emb|CAE15427.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotide
reductase 1) (B2 protein) (R2 protein) [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 376
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ ++P + KE +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAKECEQQCYDLFVQAAEQEKEWADYLFSEGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|145298925|ref|YP_001141766.1| ribonucleotide-diphosphate reductase subunit beta [Aeromonas
salmonicida subsp. salmonicida A449]
gi|142851697|gb|ABO90018.1| ribonucleoside-diphosphate reductase, beta subunit [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 377
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + + E +Q + EA + E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRTGQDDPEMAEISAECEQACFEIFKEAAIQEKEWAEYLFQDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R + +GL+P F +NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNLRMNAVGLQPAFAGAKQNPIPWINTWLSSDNVQVAPQEVEVS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|213609160|ref|ZP_03368986.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
Length = 144
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 5 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 64
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 65 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 124
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 125 YLVGQIDSEVDTD 137
>gi|326536452|ref|YP_004300883.1| NrdB aerobic ribonucleoside diphosphate reductase small subunit
[Aeromonas phage 65]
gi|312262798|gb|ADQ53054.1| NrdB aerobic ribonucleoside diphosphate reductase small subunit
[Aeromonas phage 65]
Length = 376
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPKGF 57
RDE+LHL +I++ + ++P + K + K+ ++ E E +A M
Sbjct: 237 RDENLHLKATQTIISRWQTGKDDPEMVEIAKRLEGKAVSIFEEVVAQEKEWAEYLMGDKS 296
Query: 58 -VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
GLN Y++++A+ R GL + +NP PW+++ ++ + E V
Sbjct: 297 LNGLNRDVLCNYIEYLADNRMRSAGLPSSYAKRKNPLPWVTKWLNSDSVQVAPQEVEVDS 356
Query: 116 YQQGA 120
Y GA
Sbjct: 357 YLTGA 361
>gi|42543287|pdb|1PJ0|A Chain A, Ribonucleotide Reductase R2-D84eW48F MUTANT SOAKED WITH
Ferrous Ions At Neutral Ph
gi|42543288|pdb|1PJ0|B Chain B, Ribonucleotide Reductase R2-D84eW48F MUTANT SOAKED WITH
Ferrous Ions At Neutral Ph
gi|42543289|pdb|1PJ1|A Chain A, Ribonucleotide Reductase R2-D84eW48F SOAKED WITH FERROUS
Ions At Ph 5
gi|42543290|pdb|1PJ1|B Chain B, Ribonucleotide Reductase R2-D84eW48F SOAKED WITH FERROUS
Ions At Ph 5
Length = 375
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F NP PW++ + + E V+
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 356 YLVGQIDSEVDTD 368
>gi|42543283|pdb|1PIY|A Chain A, Ribonucleotide Reductase R2 Soaked With Ferrous Ion At
Neutral Ph
gi|42543284|pdb|1PIY|B Chain B, Ribonucleotide Reductase R2 Soaked With Ferrous Ion At
Neutral Ph
gi|42543506|pdb|1R65|A Chain A, Crystal Structure Of Ferrous Soaked Ribonucleotide
Reductase R2 Subunit (Wildtype) At Ph 5 From E. Coli
gi|42543507|pdb|1R65|B Chain B, Crystal Structure Of Ferrous Soaked Ribonucleotide
Reductase R2 Subunit (Wildtype) At Ph 5 From E. Coli
Length = 375
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F NP PW++ + + E V+
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 356 YLVGQIDSEVDTD 368
>gi|33358114|pdb|1PIM|A Chain A, Dithionite Reduced E. Coli Ribonucleotide Reductase R2
Subunit, D84e Mutant
gi|33358115|pdb|1PIM|B Chain B, Dithionite Reduced E. Coli Ribonucleotide Reductase R2
Subunit, D84e Mutant
gi|33358116|pdb|1PIU|A Chain A, Oxidized Ribonucleotide Reductase R2-D84e Mutant
Containing Oxo-Bridged Diferric Cluster
gi|33358117|pdb|1PIU|B Chain B, Oxidized Ribonucleotide Reductase R2-D84e Mutant
Containing Oxo-Bridged Diferric Cluster
gi|42543285|pdb|1PIZ|A Chain A, Ribonucleotide Reductase R2 D84e Mutant Soaked With
Ferrous Ions At Neutral Ph
gi|42543286|pdb|1PIZ|B Chain B, Ribonucleotide Reductase R2 D84e Mutant Soaked With
Ferrous Ions At Neutral Ph
Length = 375
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F NP PW++ + + E V+
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 356 YLVGQIDSEVDTD 368
>gi|251792578|ref|YP_003007304.1| ribonucleoside-diphosphate reductase subunit beta [Aggregatibacter
aphrophilus NJ8700]
gi|247533971|gb|ACS97217.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
aphrophilus NJ8700]
Length = 329
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF-VGL 60
++E +H FGI + + ++ E P L+T F + + + +A E + G L
Sbjct: 198 KEEEIHGRFGITLYSILREEQPELFTDAFFTELKELADQAFTAEKEILNWIFEDGELDFL 257
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
+ + E Y+ N +GLEP + W I KE +FF R T+Y
Sbjct: 258 SKATVENYIANRYNNSLQALGLEPAYNINPEQLKETEWFDIEILSTKETDFFNKRSTDYS 317
Query: 118 Q 118
+
Sbjct: 318 K 318
>gi|331642864|ref|ZP_08343999.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli H736]
gi|331039662|gb|EGI11882.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli H736]
Length = 449
Score = 80.4 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 310 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 369
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 370 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 429
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 430 YLVGQIDSEVDTD 442
>gi|119472403|ref|ZP_01614521.1| ribonucleotide-diphosphate reductase beta subunit [Alteromonadales
bacterium TW-7]
gi|119444925|gb|EAW26223.1| ribonucleotide-diphosphate reductase beta subunit [Alteromonadales
bacterium TW-7]
Length = 376
Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL+ ++N ++ ++P + + + ++ M +A E +A
Sbjct: 237 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVQAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R IGL F+ NP PW++ + + E ++
Sbjct: 297 MIGLNKHILCQYVEYITNARMTAIGLPAQFENNSNPIPWINSWLVSDNVQVAPQEAEISS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|90409249|ref|ZP_01217354.1| ribonucleotide-diphosphate reductase beta subunit [Psychromonas sp.
CNPT3]
gi|90309647|gb|EAS37827.1| ribonucleotide-diphosphate reductase beta subunit [Psychromonas sp.
CNPT3]
Length = 381
Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN ++N ++P + E K R + A E +A
Sbjct: 242 RDEALHLNSTQQILNIWADGKDDPEMAEIAIECHAKGRDIFLTAAAQEKEWAAYLFKDGS 301
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I+N R IG E F+ NP PW++ + + E ++
Sbjct: 302 MIGLNEVILCQYVEYISNVRMQAIGYEAPFEIKNNPIPWINHWLISDNVQVAPQEAEISS 361
Query: 116 YQQG 119
Y G
Sbjct: 362 YLVG 365
>gi|260772919|ref|ZP_05881835.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
metschnikovii CIP 69.14]
gi|260612058|gb|EEX37261.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
metschnikovii CIP 69.14]
Length = 377
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSR----TMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +IN ++ + ++ + + EA E +A
Sbjct: 237 RDEALHLTGTQHMINLLRNGLDDFTFLQIAEECKQQCFDLFKEAAEQEKEWAAYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GLEP + T NP PW++ + + E ++
Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLEPAYPKATSNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|292488819|ref|YP_003531706.1| ribonucleoside-diphosphate reductase 1 subunit beta [Erwinia
amylovora CFBP1430]
gi|292899970|ref|YP_003539339.1| ribonucleoside-diphosphate reductase 1 subunit beta [Erwinia
amylovora ATCC 49946]
gi|291199818|emb|CBJ46941.1| ribonucleoside-diphosphate reductase 1 beta subunit [Erwinia
amylovora ATCC 49946]
gi|291554253|emb|CBA21550.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
amylovora CFBP1430]
gi|312172977|emb|CBX81232.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
amylovora ATCC BAA-2158]
Length = 376
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ ++P + KE +Q+ + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQEKEWAEYLFSGGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R + +GL+ FK NP PW++ + + E V+
Sbjct: 297 MIGLNKDILWQYIEYITNIRMNAVGLDLPFKTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVNAD 369
>gi|148653376|ref|YP_001280469.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter
sp. PRwf-1]
gi|148572460|gb|ABQ94519.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Psychrobacter sp. PRwf-1]
Length = 377
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +IN + ++P + + + +S + +A E +A
Sbjct: 237 RDEALHLTSTQHMINIMASGKDDPEMAEISAQCHNESIEIFRKAAEQEKEWAGYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL +F ++ NP PW++ + + ET ++
Sbjct: 297 MIGLNKDILCQYVEYITNLRMEAVGLPGIFPESKSNPIPWINTWLSSDNVQVAPQETEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|163748931|ref|ZP_02156182.1| ribonucleotide-diphosphate reductase beta subunit [Shewanella
benthica KT99]
gi|161331307|gb|EDQ02195.1| ribonucleotide-diphosphate reductase beta subunit [Shewanella
benthica KT99]
Length = 376
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN ++ ++ ++P + +E +Q + + +A E +A
Sbjct: 237 RDEALHLNSTQHILKIMRAGVDDPEMGEIAEECEQLAYDIFVKAAEQEKEWAQYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R + L P + NP PWM ++ + E V+
Sbjct: 297 MIGLNEAILCQYVEYITNERMKSVNLTPHYDEITNPLPWMKNWLESDAVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|331653669|ref|ZP_08354670.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli M718]
gi|331048518|gb|EGI20594.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli M718]
Length = 449
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 310 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 369
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 370 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 429
Query: 116 YQQG 119
Y G
Sbjct: 430 YLVG 433
>gi|162139926|ref|YP_339935.2| ribonucleotide-diphosphate reductase subunit beta
[Pseudoalteromonas haloplanktis TAC125]
Length = 376
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL+ ++N ++ ++P + + + ++ M +A E +A
Sbjct: 237 RDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R IG FK NP PW++ + + E ++
Sbjct: 297 MIGLNKHILCQYVEYITNARMTAIGFPAQFKNNSNPIPWINSWLVSDNVQVAPQEAEISS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|241589542|ref|YP_002979567.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
gi|240868254|gb|ACS65913.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
Length = 328
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/79 (56%), Positives = 58/79 (73%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH NFGID+INQIK+ENPHLWT EF+ + + +A LE YA +TMP+G +GL
Sbjct: 233 LRDESLHCNFGIDLINQIKLENPHLWTAEFKVEITELFKQAVDLEYRYAEDTMPRGVLGL 292
Query: 61 NAPSCEQYMQFIANRRCHQ 79
NA + Y++FI NRRC
Sbjct: 293 NASMFKGYLRFICNRRCRS 311
>gi|290473788|ref|YP_003466662.1| ribonucleoside-diphosphate reductase 1 subunit beta [Xenorhabdus
bovienii SS-2004]
gi|289173095|emb|CBJ79868.1| ribonucleoside-diphosphate reductase 1, beta subunit [Xenorhabdus
bovienii SS-2004]
Length = 376
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIARECEQQCYDLFVQAAEQEKEWADYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|295134784|ref|YP_003585460.1| ribonucleotide reductase [Zunongwangia profunda SM-A87]
gi|294982799|gb|ADF53264.1| ribonucleotide reductase [Zunongwangia profunda SM-A87]
Length = 324
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 4/120 (3%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVGLN 61
DE +H N GI +INQI+ E P + +E +K ++ + +E +N
Sbjct: 194 DEQIHANAGIYIINQIREEYPDYFNEEMTRKLTDVVTRSIEVEEEILDWIFENGQLENIN 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ +M+F + IGL + T P W E + +FF R +Y +
Sbjct: 254 KKNLMDFMKFRLDDSLKSIGLPKQYNITAAEYQPMLWFEEEVFANSLDDFFARRPVDYTK 313
>gi|110806205|ref|YP_689725.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
flexneri 5 str. 8401]
gi|110615753|gb|ABF04420.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
flexneri 5 str. 8401]
gi|281601680|gb|ADA74664.1| putative ribonucleotide reductase, beta subunit [Shigella flexneri
2002017]
Length = 453
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 314 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 373
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 374 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 433
Query: 116 YQQG 119
Y G
Sbjct: 434 YLVG 437
>gi|259907948|ref|YP_002648304.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia
pyrifoliae Ep1/96]
gi|224963570|emb|CAX55060.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
pyrifoliae Ep1/96]
gi|283477829|emb|CAY73745.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
pyrifoliae DSM 12163]
gi|310768143|gb|ADP13093.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia sp.
Ejp617]
Length = 376
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ ++P + KE +Q+ + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQEKEWAEYLFSGGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R + +GL+ FK NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYIEYITNIRMNAVGLDLPFKTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVNAD 369
>gi|33519930|ref|NP_878762.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
Blochmannia floridanus]
gi|33504276|emb|CAD83168.1| ribonucleoside-diphosphate reductase 1 beta chain [Candidatus
Blochmannia floridanus]
Length = 376
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWTKE--FQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDESLHLN ++N ++ ++P + Q++S + A E +AH
Sbjct: 237 RDESLHLNATQHILNLMRSGSDDPEMVDISLICQEESYNLFLMAAEQEKTWAHYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R IGL+ F N PW++ + + E +
Sbjct: 297 MIGLNKEILCQYIEYITNIRMQAIGLKTPFNTKTNSIPWINAWLSSDNVQVAPQEVESSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|188533366|ref|YP_001907163.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia
tasmaniensis Et1/99]
gi|188028408|emb|CAO96269.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
tasmaniensis Et1/99]
Length = 376
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ ++P + KE +Q+ + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQEKEWAEYLFSGGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R + +GL+ FK NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYIEYITNIRMNAVGLDLPFKTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVNAD 369
>gi|149911236|ref|ZP_01899859.1| ribonucleotide-diphosphate reductase beta subunit [Moritella sp.
PE36]
gi|149805690|gb|EDM65689.1| ribonucleotide-diphosphate reductase beta subunit [Moritella sp.
PE36]
Length = 376
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + + E Q+++ + +A E +A
Sbjct: 237 RDEALHLTSTQHILNLMADGKDDPEMQEISIECFQETQKIFTDAAQQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN Y+++I N R +GL F+ NP PW++ + + E+ ++
Sbjct: 297 MIGLNKDILSDYIEYITNTRMAAVGLPKAFEVKSNPLPWINAWLISDNVQVAPQESEISS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|294140834|ref|YP_003556812.1| ribonucleoside-diphosphate reductase subunit beta [Shewanella
violacea DSS12]
gi|293327303|dbj|BAJ02034.1| ribonucleoside-diphosphate reductase, beta subunit [Shewanella
violacea DSS12]
Length = 376
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN ++ ++ ++P + KE +Q + + +A E +A
Sbjct: 237 RDEALHLNSTQHILKIMRAGADDPEMGEIAKECEQLAYDIFVKAAEQEKEWAQYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R + L + NP PWM ++ + E V+
Sbjct: 297 MIGLNQAILCQYVEYITNERMKSVNLPCHYDEITNPLPWMKNWLESDAVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|213021870|ref|ZP_03336317.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 277
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 138 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 197
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 198 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 257
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 258 YLVGQIDSEVDTD 270
>gi|87311395|ref|ZP_01093515.1| ribonucleotide-diphosphate reductase beta subunit [Blastopirellula
marina DSM 3645]
gi|87285807|gb|EAQ77721.1| ribonucleotide-diphosphate reductase beta subunit [Blastopirellula
marina DSM 3645]
Length = 313
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 57/84 (67%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++HLNFGID+IN IK ENP LWT EFQ + ++ +A LEI YA + +P G +GL
Sbjct: 229 LRDETVHLNFGIDLINGIKAENPDLWTAEFQAEIIDLIKQAVELEIEYAGDCLPNGILGL 288
Query: 61 NAPSCEQYMQFIANRRCHQIGLEP 84
N Y+ ++A+RR +IGL
Sbjct: 289 NRDLFRDYVHYVADRRVERIGLPK 312
>gi|161502570|ref|YP_001569682.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:-- str.
RSK2980]
gi|160863917|gb|ABX20540.1| hypothetical protein SARI_00614 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 376
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMADIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVDTD 369
>gi|170726650|ref|YP_001760676.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
woodyi ATCC 51908]
gi|169811997|gb|ACA86581.1| Ribonucleoside-diphosphate reductase [Shewanella woodyi ATCC 51908]
Length = 376
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN +I ++ ++P + KE +Q++ + +A E +A
Sbjct: 237 RDEALHLNSTQHIIKLMQAGKDDPEMGEIAKECEQQAYDIFVKAAEQEKEWARYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R + L+ + NP PWM ++ + E V+
Sbjct: 297 MIGLNEQILCQYVEYITNERMKSVNLDLPYAQITNPLPWMKTWLESDSVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|221134587|ref|ZP_03560892.1| ribonucleotide-diphosphate reductase subunit beta [Glaciecola sp.
HTCC2999]
Length = 376
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL V+N ++P + KE +Q++R + A E +A
Sbjct: 237 RDENLHLTSTQHVLNLWAKGKDDPEMAEIAKECEQEARDIFLNAVQQEKEWAAFLFNNGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN Y+++IAN+R IGL F + NP PWM+ ++ + E+ ++
Sbjct: 297 MIGLNEEILCSYVEYIANQRMAAIGLGQPFDVSSNPLPWMNNYLNSDNVQVAPQESEISS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|262402402|ref|ZP_06078963.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
sp. RC586]
gi|262351184|gb|EEZ00317.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
sp. RC586]
Length = 360
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ +E +Q+S + EA E +A
Sbjct: 220 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAAYLFKDGS 279
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GLEP + T NP PW++ + + E ++
Sbjct: 280 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPTATTNPIPWINAWLSSDNVQVAPQEAEIS 339
Query: 115 EYQQG 119
Y G
Sbjct: 340 SYLVG 344
>gi|238761950|ref|ZP_04622923.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
kristensenii ATCC 33638]
gi|238699678|gb|EEP92422.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
kristensenii ATCC 33638]
Length = 400
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +IN ++ ++P + +E QQ+ + A E +A
Sbjct: 261 RDEALHLTGTQHIINLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 320
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F NP PW++ + + E V+
Sbjct: 321 MIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWINSWLVSDNVQVAPQEVEVSS 380
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 381 YLVGQIDSEISAD 393
>gi|117619492|ref|YP_856857.1| ribonucleotide-diphosphate reductase subunit beta [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|117560899|gb|ABK37847.1| ribonucleoside-diphosphate reductase, beta subunit [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 377
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E +Q + EA + E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRSGQDDPEMAEIAAECEQACFELFKEAAIQEKEWAEYLFQDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R + +GL+P F +NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNLRMNAVGLQPAFAGAKQNPIPWINTWLSSDNVQVAPQEVEVS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|71033209|ref|XP_766246.1| ribonucleotide-diphosphate reductase small subunit [Theileria parva
strain Muguga]
gi|68353203|gb|EAN33963.1| ribonucleotide-diphosphate reductase small subunit, putative
[Theileria parva]
Length = 308
Score = 79.2 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 18/106 (16%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +FG + + +K + P + + ++ EA ++E +Y +++P +G+N
Sbjct: 201 RDEGLHADFGCFIYHNLKHKLPE-------EAVQQIIKEAVVVERSYICDSLPCDLIGMN 253
Query: 62 A----------PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
+ QY++F+A+R +G+ P++ T NPF WM
Sbjct: 254 SRKKILTHCLIELMTQYIEFVADRLLQALGVRPVYNVT-NPFDWMQ 298
>gi|290508492|ref|ZP_06547863.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella sp.
1_1_55]
gi|289777886|gb|EFD85883.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella sp.
1_1_55]
Length = 405
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + A E +A
Sbjct: 266 RDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGS 325
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 326 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 385
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 386 YLVGQIDSEVDAD 398
>gi|324020907|gb|EGB90126.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 117-3]
Length = 420
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 281 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 340
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 400
Query: 116 YQQG 119
Y G
Sbjct: 401 YLVG 404
>gi|161582009|ref|NP_230900.2| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
O1 biovar El Tor str. N16961]
gi|255745652|ref|ZP_05419600.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholera CIRS 101]
gi|262159072|ref|ZP_06030184.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae INDRE 91/1]
gi|262169430|ref|ZP_06037122.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae RC27]
gi|262191406|ref|ZP_06049594.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae CT 5369-93]
gi|255736727|gb|EET92124.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholera CIRS 101]
gi|262022243|gb|EEY40952.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae RC27]
gi|262029257|gb|EEY47909.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae INDRE 91/1]
gi|262032695|gb|EEY51245.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae CT 5369-93]
gi|327483944|gb|AEA78351.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Vibrio cholerae LMA3894-4]
Length = 377
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ +E +Q+S + EA E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GLEP + T NP PW++ + + E ++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|56460472|ref|YP_155753.1| ribonucleotide-diphosphate reductase subunit beta [Idiomarina
loihiensis L2TR]
gi|56179482|gb|AAV82204.1| Ribonucleotide reductase, beta subunit [Idiomarina loihiensis L2TR]
Length = 377
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE++HL ++N + ++P + +E + + + A E +AH
Sbjct: 237 RDENVHLTSTQHILNLWQYGEDDPEMKEIAEELRDDAYEIFMTAVKQEKQWAHYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++IAN R IG + F NP PWM++ + + E+ +T
Sbjct: 297 MIGLNESMLCQYVEYIANLRMQAIGFDAPFENQRSNPLPWMNKYLVSDNVQVAPQESEIT 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|284009345|emb|CBA76525.1| ribonucleoside-diphosphate reductase 1, beta subunit [Arsenophonus
nasoniae]
Length = 378
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ ++P + KE ++ + +A E +A
Sbjct: 239 RDEALHLTGTQHMLNLMRSGQDDPEMAIIAKECEEACYRLFVQAAEQEKEWAEYLFSGGS 298
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 299 MIGLNKDILCQYIEYITNIRMQAVGLKLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 358
Query: 116 YQQG 119
Y G
Sbjct: 359 YLVG 362
>gi|327198722|emb|CCA61423.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
Length = 395
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 53/133 (39%), Gaps = 17/133 (12%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWT-----------KEFQQKSRTMLHEATLLEIAYAHE 51
DE+ H + I + EN + + + E LE + +
Sbjct: 250 DETQHTDGMITLFKIFVDENTECRCNPILGCNCIRPDVLRDTVKKIALEMVRLEDEFINL 309
Query: 52 TMPKG-----FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKE 105
+ F+ ++ +QY++FIAN+R + + F ++NP P +I+
Sbjct: 310 AYDEYADDEVFMNISKTKLKQYIRFIANKRMEAMRYDHPFPEASDNPLPEFEIMINAPIN 369
Query: 106 KNFFETRVTEYQQ 118
NFFE R T+Y +
Sbjct: 370 TNFFENRSTDYAR 382
>gi|229505158|ref|ZP_04394668.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae BX 330286]
gi|229511170|ref|ZP_04400649.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae B33]
gi|229515628|ref|ZP_04405087.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae TMA 21]
gi|229518289|ref|ZP_04407733.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae RC9]
gi|229521368|ref|ZP_04410787.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae TM 11079-80]
gi|229525854|ref|ZP_04415259.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae bv. albensis VL426]
gi|229529665|ref|ZP_04419055.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae 12129(1)]
gi|229608178|ref|YP_002878826.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
MJ-1236]
gi|229333439|gb|EEN98925.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae 12129(1)]
gi|229339435|gb|EEO04452.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae bv. albensis VL426]
gi|229341466|gb|EEO06469.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae TM 11079-80]
gi|229345004|gb|EEO09978.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae RC9]
gi|229347397|gb|EEO12357.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae TMA 21]
gi|229351135|gb|EEO16076.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae B33]
gi|229357381|gb|EEO22298.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae BX 330286]
gi|229370833|gb|ACQ61256.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
cholerae MJ-1236]
Length = 381
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ +E +Q+S + EA E +A
Sbjct: 241 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGS 300
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GLEP + T NP PW++ + + E ++
Sbjct: 301 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWINAWLSSDNVQVAPQEAEIS 360
Query: 115 EYQQG 119
Y G
Sbjct: 361 SYLVG 365
>gi|183599610|ref|ZP_02961103.1| hypothetical protein PROSTU_03095 [Providencia stuartii ATCC 25827]
gi|188021860|gb|EDU59900.1| hypothetical protein PROSTU_03095 [Providencia stuartii ATCC 25827]
Length = 378
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ ++P + E + + + +A E +A
Sbjct: 239 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEDECYKLFVDAAEQEKEWAEYLFSEGS 298
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 299 MIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWINAWLVSDNVQVAPQEVEVSS 358
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 359 YLVGQIDSEVNTD 371
>gi|327394563|dbj|BAK11985.1| ribonucleoside-diphosphate reductase 1 beta subunit NrdB [Pantoea
ananatis AJ13355]
Length = 376
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ ++P + E +++ + +A L E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRTGEDDPEMKEIAAECREECFELFKKAALQEKEWAEYLFSGGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|268591162|ref|ZP_06125383.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
rettgeri DSM 1131]
gi|291313388|gb|EFE53841.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
rettgeri DSM 1131]
Length = 378
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ ++P + E +Q+ + +A E +A
Sbjct: 239 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVQAAEQEKEWADYLFSEGS 298
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 299 MIGLNKDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 358
Query: 116 Y---QQGAELKWD 125
Y Q +++ D
Sbjct: 359 YLVGQIDSQVDTD 371
>gi|153819185|ref|ZP_01971852.1| ribonucleoside-diphosphate reductase 1 subunit beta [Vibrio
cholerae NCTC 8457]
gi|126510271|gb|EAZ72865.1| ribonucleoside-diphosphate reductase 1 subunit beta [Vibrio
cholerae NCTC 8457]
Length = 171
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ +E +Q+S + EA E +A
Sbjct: 31 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGS 90
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GLEP + T NP PW++ + + E ++
Sbjct: 91 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWINAWLSSDNVQVAPQEAEIS 150
Query: 115 EYQQG 119
Y G
Sbjct: 151 SYLVG 155
>gi|121590730|ref|ZP_01678061.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
2740-80]
gi|147674333|ref|YP_001216820.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
O395]
gi|153212320|ref|ZP_01948108.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
1587]
gi|153801907|ref|ZP_01956493.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
MZO-3]
gi|153823603|ref|ZP_01976270.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
B33]
gi|153827294|ref|ZP_01979961.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
MZO-2]
gi|153829732|ref|ZP_01982399.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
623-39]
gi|227081427|ref|YP_002809978.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
M66-2]
gi|254291706|ref|ZP_04962493.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
AM-19226]
gi|254848379|ref|ZP_05237729.1| ribonucleoside-diphosphate reductase [Vibrio cholerae MO10]
gi|297578847|ref|ZP_06940775.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio cholerae
RC385]
gi|298498653|ref|ZP_07008460.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
MAK 757]
gi|9655738|gb|AAF94414.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
O1 biovar El Tor str. N16961]
gi|121547411|gb|EAX57522.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
2740-80]
gi|124116698|gb|EAY35518.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
1587]
gi|124122552|gb|EAY41295.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
MZO-3]
gi|126518882|gb|EAZ76105.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
B33]
gi|146316216|gb|ABQ20755.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
O395]
gi|148874766|gb|EDL72901.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
623-39]
gi|149738785|gb|EDM53127.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
MZO-2]
gi|150422390|gb|EDN14350.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
AM-19226]
gi|227009315|gb|ACP05527.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
M66-2]
gi|227013172|gb|ACP09382.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
O395]
gi|254844084|gb|EET22498.1| ribonucleoside-diphosphate reductase [Vibrio cholerae MO10]
gi|297536441|gb|EFH75274.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio cholerae
RC385]
gi|297542986|gb|EFH79036.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
MAK 757]
Length = 389
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ +E +Q+S + EA E +A
Sbjct: 249 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGS 308
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GLEP + T NP PW++ + + E ++
Sbjct: 309 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWINAWLSSDNVQVAPQEAEIS 368
Query: 115 EYQQG 119
Y G
Sbjct: 369 SYLVG 373
>gi|291618170|ref|YP_003520912.1| NrdB [Pantoea ananatis LMG 20103]
gi|291153200|gb|ADD77784.1| NrdB [Pantoea ananatis LMG 20103]
Length = 387
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ ++P + E +++ + +A L E +A
Sbjct: 248 RDEALHLTGTQHMLNLLRTGEDDPEMKEIAAECREECFELFKKAALQEKEWAEYLFSGGS 307
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 308 MIGLNKDILCQYIEYITNIRMQAVGLDLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 367
Query: 116 YQQG 119
Y G
Sbjct: 368 YLVG 371
>gi|238895770|ref|YP_002920506.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
pneumoniae NTUH-K2044]
gi|238548088|dbj|BAH64439.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
Length = 396
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + A E +A
Sbjct: 257 RDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGS 316
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 317 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 376
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 377 YLVGQIDSEVDAD 389
>gi|152997008|ref|YP_001341843.1| ribonucleotide-diphosphate reductase subunit beta [Marinomonas sp.
MWYL1]
gi|150837932|gb|ABR71908.1| Ribonucleoside-diphosphate reductase [Marinomonas sp. MWYL1]
Length = 377
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + E Q + R + EA E +A
Sbjct: 238 RDEALHLTGTQHMLNLMASGKDDPEMAVIAAECQDEVRQIFIEAAEQEKEWATYLFKDGS 297
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLNA QY+++I N R +GLE F NP PW++ + + E ++
Sbjct: 298 MIGLNAQILGQYVEYITNVRMQAVGLETCFATKHNPIPWINAWLVSDNVQVAPQEAEISS 357
Query: 116 YQQG 119
Y G
Sbjct: 358 YLVG 361
>gi|119774862|ref|YP_927602.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
amazonensis SB2B]
gi|119767362|gb|ABL99932.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Shewanella amazonensis SB2B]
Length = 391
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN ++N ++ ++ + E QQ++ + A E +A
Sbjct: 252 RDEALHLNSTQHILNIMQGGKDDAEMAEIAIECQQEAYDLFLRAAEQEKEWAKYLFKDGS 311
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N+R + L + + NP PWM ++ + E V+
Sbjct: 312 MIGLNEQILCQYVEYITNQRMKSVNLPLPYPESTNPLPWMKNWLESDAVQVAPQEVEVSS 371
Query: 116 YQQG 119
Y G
Sbjct: 372 YLVG 375
>gi|311278798|ref|YP_003941029.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
gi|308747993|gb|ADO47745.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
Length = 376
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|261211025|ref|ZP_05925315.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
sp. RC341]
gi|260840000|gb|EEX66600.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
sp. RC341]
Length = 360
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ +E +Q+S + EA E +A
Sbjct: 220 RDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAAYLFKDGS 279
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GLEP + T NP PW++ + + E ++
Sbjct: 280 MIGLNRDILCQYVEYITNIRMQAVGLEPAYPTATTNPIPWINAWLSSDNVQVAPQEAEIS 339
Query: 115 EYQQG 119
Y G
Sbjct: 340 SYLVG 344
>gi|256422447|ref|YP_003123100.1| ribonucleotide reductase [Chitinophaga pinensis DSM 2588]
gi|256037355|gb|ACU60899.1| ribonucleotide reductase [Chitinophaga pinensis DSM 2588]
Length = 324
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGLN 61
DE +H N GI +IN+I+ E P ++ + + ++ E+ +E ++
Sbjct: 194 DEQIHANAGIYLINKIREEYPEMFDEATITRVSNLVKESIEVESNILDWIFSEGKIDTVS 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+M++ A+ +I L LF + P W E + +FF R +Y +
Sbjct: 254 KEHLVNFMKYRADDSLKKINLPALFNISTEDNKPMLWFEEEVFANSLDDFFAKRPVDYTK 313
>gi|56412825|ref|YP_149900.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|197361758|ref|YP_002141394.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|56127082|gb|AAV76588.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|197093234|emb|CAR58679.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
Length = 376
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVDTD 369
>gi|50120137|ref|YP_049304.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
atrosepticum SCRI1043]
gi|49610663|emb|CAG74108.1| ribonucleoside-diphosphate reductase 1 beta chain [Pectobacterium
atrosepticum SCRI1043]
Length = 376
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E QQ+ + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQGVGLSLPFQTRTNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEISDD 369
>gi|238797463|ref|ZP_04640962.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
mollaretii ATCC 43969]
gi|238718734|gb|EEQ10551.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
mollaretii ATCC 43969]
Length = 376
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +IN ++ ++P + +E QQ+ + A E +A
Sbjct: 237 RDEALHLTGTQHIINLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F NP PW++ + + E V+
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWINSWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEISAD 369
>gi|317048919|ref|YP_004116567.1| ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
gi|316950536|gb|ADU70011.1| Ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
Length = 376
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ ++P + E + + + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRTGEDDPEMKEIAAECRDECYDLFKKAAEQEKEWAEYLFSGGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQGA----ELKWD 125
Y G + D
Sbjct: 357 YLVGQIDAEVGEDD 370
>gi|297521777|ref|ZP_06940163.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
OP50]
Length = 174
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 35 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 94
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 95 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 154
Query: 116 YQQG 119
Y G
Sbjct: 155 YLVG 158
>gi|304414248|ref|ZP_07395616.1| ribonucleotide reductase beta subunit [Candidatus Regiella
insecticola LSR1]
gi|304283462|gb|EFL91858.1| ribonucleotide reductase beta subunit [Candidatus Regiella
insecticola LSR1]
Length = 381
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +IN ++ ++P + KE Q + +A E +A
Sbjct: 242 RDEALHLTGTQHIINLMREGTDDPEMAEIAKECQNNCFELFKKAAEQEKEWATYLFRDGS 301
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL FK NP PW++ + + E V+
Sbjct: 302 MIGLNKDILCQYIEYITNIRMQAVGLALPFKIRSNPIPWINAWLSSDNVQVAPQEVEVSS 361
Query: 116 YQQG 119
Y G
Sbjct: 362 YLVG 365
>gi|170077010|ref|YP_001733648.1| ribonucleoside-diphosphate reductase, beta subunit [Synechococcus
sp. PCC 7002]
gi|169884679|gb|ACA98392.1| ribonucleoside-diphosphate reductase, beta subunit [Synechococcus
sp. PCC 7002]
Length = 352
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 13/132 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H+ +I + H M+ A E + + + +G+
Sbjct: 224 RDELSHVRLFQKLIPEAMATFDH-----SVDHIYEMVERAVQYECQWTNHIVGNDILGIT 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVID----LKKEKNFFETRVT 114
S E Y +++AN R IGLEPL+K Y ++P+ + D + NFFE VT
Sbjct: 279 EQSTEIYTKYLANIRLQAIGLEPLYKGDQYKKSPYRHLERFSDTKKEGNTKANFFEAGVT 338
Query: 115 EYQQGAELK-WD 125
Y + + WD
Sbjct: 339 SYVMSSGITGWD 350
>gi|212635281|ref|YP_002311806.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
piezotolerans WP3]
gi|212556765|gb|ACJ29219.1| Ribonucleoside-diphosphate reductase, beta subunit [Shewanella
piezotolerans WP3]
Length = 376
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN ++ + ++P + KE +Q + + +A E +A
Sbjct: 237 RDEALHLNSTQHILKIMHAGKDDPEMAEIAKECEQTAIDIFVKAAEQEKEWAKYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R + LE + NP PWM ++ + E V+
Sbjct: 297 MIGLNEQILCQYVEYITNERMKAVNLESPYAEQSNPLPWMKNWLESDAVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|85711601|ref|ZP_01042658.1| ribonucleotide-diphosphate reductase beta subunit [Idiomarina
baltica OS145]
gi|85694461|gb|EAQ32402.1| ribonucleotide-diphosphate reductase beta subunit [Idiomarina
baltica OS145]
Length = 377
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE++HL +IN + ++P + +E ++ + A E +AH
Sbjct: 237 RDENVHLTSTQHMINLWQDGEDDPEMAEIAEELADEAYEIFMTAVKQEKQWAHYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++IAN R IG + F NP PWM++ + + E ++
Sbjct: 297 MIGLNESMLCQYVEYIANLRMQAIGYDAPFPEQRSNPLPWMNKYLVSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|213646443|ref|ZP_03376496.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|289824706|ref|ZP_06544205.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
Length = 240
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 101 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 160
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 161 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 220
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 221 YLVGQIDSEVDTD 233
>gi|205353394|ref|YP_002227195.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|205273175|emb|CAR38137.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|326628485|gb|EGE34828.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9]
Length = 376
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVDTD 369
>gi|30984468|ref|NP_851900.1| ribonucleotide reductase subunit 2 [Macacine herpesvirus 1]
gi|28804676|dbj|BAC58080.1| ribonucleotide reductase small subunit [Cercopithecine herpesvirus
1]
gi|30844282|gb|AAP41458.1| small subunit of ribonucleotide reductase [Macacine herpesvirus 1]
Length = 338
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K ++ + EA +EI + P L+
Sbjct: 217 RDEAVHTTASCYIYNNYLGGH----RKPTAERVYRLFREAVDIEIGFIRSQAPANSRVLD 272
Query: 62 A---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP-WMSEVIDLKKEKNFFETRVTEYQ 117
A + E Y++F A+R I ++PLF P P + ++ +K NFFE R T Y
Sbjct: 273 AAALDAIENYVRFSADRLLVLIKMKPLFGAPA-PAPSFPLSLMSTEKHTNFFECRSTAYA 331
Query: 118 QGAELKW 124
GA +
Sbjct: 332 -GAVVND 337
>gi|332100965|gb|EGJ04311.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
Length = 420
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 281 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 340
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 400
Query: 116 YQQG 119
Y G
Sbjct: 401 YLVG 404
>gi|251790602|ref|YP_003005323.1| ribonucleotide-diphosphate reductase subunit beta [Dickeya zeae
Ech1591]
gi|247539223|gb|ACT07844.1| ribonucleotide reductase [Dickeya zeae Ech1591]
Length = 376
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E QQ+ + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRAGQDDPEMAQVAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEINTD 369
>gi|113970253|ref|YP_734046.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
MR-4]
gi|114047558|ref|YP_738108.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
MR-7]
gi|113884937|gb|ABI38989.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Shewanella sp. MR-4]
gi|113889000|gb|ABI43051.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Shewanella sp. MR-7]
Length = 376
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN ++ ++ ++P + E QQ++ + +A E +A
Sbjct: 237 RDEALHLNSTQHILTIMQAGKDDPEMGEIAAECQQEAYNLFLKAAEQEKEWAKYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N+R + L + NP PWM ++ + E V+
Sbjct: 297 MIGLNEQILCQYVEYITNQRMKSVNLPQPYAEQSNPLPWMKNWLESDAVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q + + D
Sbjct: 357 YLVGQIDSAVDSD 369
>gi|323945045|gb|EGB41110.1| nrdB protein [Escherichia coli H120]
Length = 178
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 39 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 98
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 99 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 158
Query: 116 YQQG 119
Y G
Sbjct: 159 YLVG 162
>gi|16765605|ref|NP_461220.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|62180851|ref|YP_217268.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|161613001|ref|YP_001586966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|167549728|ref|ZP_02343487.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|167992612|ref|ZP_02573709.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|168237293|ref|ZP_02662351.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|168242393|ref|ZP_02667325.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|168261709|ref|ZP_02683682.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|168466025|ref|ZP_02699895.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|168817991|ref|ZP_02829991.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|194442577|ref|YP_002041539.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194449379|ref|YP_002046332.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194735273|ref|YP_002115349.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197247637|ref|YP_002147234.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197262505|ref|ZP_03162579.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|198242288|ref|YP_002216347.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|200387602|ref|ZP_03214214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|204929071|ref|ZP_03220214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|207857697|ref|YP_002244348.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|213161593|ref|ZP_03347303.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|224583238|ref|YP_002637036.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|1172945|sp|P37427|RIR2_SALTY RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta;
AltName: Full=Protein B2; AltName: Full=Protein R2;
AltName: Full=Ribonucleotide reductase 1
gi|510349|emb|CAA51453.1| nrdB [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|16420817|gb|AAL21179.1| ribonucleoside-diphosphate reductase 1, beta subunit [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|62128484|gb|AAX66187.1| ribonucleoside-diphosphate reductase 1, beta subunit [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|161362365|gb|ABX66133.1| hypothetical protein SPAB_00707 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401240|gb|ACF61462.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194407683|gb|ACF67902.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194710775|gb|ACF89996.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|195631367|gb|EDX49927.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|197211340|gb|ACH48737.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197240760|gb|EDY23380.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|197289678|gb|EDY29041.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|197936804|gb|ACH74137.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|199604700|gb|EDZ03245.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|204321615|gb|EDZ06814.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|205325266|gb|EDZ13105.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205329222|gb|EDZ15986.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205338588|gb|EDZ25352.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|205344845|gb|EDZ31609.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|205349363|gb|EDZ35994.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|206709500|emb|CAR33844.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|224467765|gb|ACN45595.1| ribonucleotide-diphosphate reductase beta subunit [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|261247486|emb|CBG25313.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267994368|gb|ACY89253.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301158836|emb|CBW18349.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|312913268|dbj|BAJ37242.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|320086715|emb|CBY96487.1| ribonucleoside diphosphage reductase 1, beta subunit, B2
[Salmonella enterica subsp. enterica serovar Weltevreden
str. 2007-60-3289-1]
gi|321223022|gb|EFX48093.1| Ribonucleotide reductase of class Ia aerobic, beta subunit
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|322617030|gb|EFY13936.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322617664|gb|EFY14563.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322624706|gb|EFY21535.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322630255|gb|EFY27025.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322634436|gb|EFY31169.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322639146|gb|EFY35838.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322640143|gb|EFY36809.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322645769|gb|EFY42293.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322651544|gb|EFY47919.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322656105|gb|EFY52404.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322659457|gb|EFY55704.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322665919|gb|EFY62102.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669843|gb|EFY65984.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322673828|gb|EFY69925.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322678586|gb|EFY74642.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322683618|gb|EFY79632.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322687694|gb|EFY83664.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|322715327|gb|EFZ06898.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Choleraesuis str. A50]
gi|323130608|gb|ADX18038.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhimurium str. 4/74]
gi|323196209|gb|EFZ81366.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323198377|gb|EFZ83479.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323204185|gb|EFZ89196.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323208571|gb|EFZ93510.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|323212337|gb|EFZ97160.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323218256|gb|EGA02966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323222986|gb|EGA07335.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323227421|gb|EGA11586.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323232251|gb|EGA16354.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323235716|gb|EGA19800.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323241124|gb|EGA25160.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323244866|gb|EGA28868.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323248577|gb|EGA32508.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323251597|gb|EGA35465.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323255474|gb|EGA39237.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323263076|gb|EGA46622.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323268136|gb|EGA51613.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323270771|gb|EGA54209.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|326624097|gb|EGE30442.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Dublin str. 3246]
Length = 376
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVDTD 369
>gi|253989035|ref|YP_003040391.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|211638141|emb|CAR66767.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid
reductase 1) (b2 protein) (r2 protein) [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253780485|emb|CAQ83647.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid
reductase 1) (b2 protein) (r2 protein) [Photorhabdus
asymbiotica]
Length = 376
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ ++P + E +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGQDDPEMAEIANECEQQCYDLFVQAAEQEKEWADYLFSEGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|40889712|pdb|1RSR|A Chain A, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of
Ribonucleotide Reductase
gi|40889713|pdb|1RSR|B Chain B, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of
Ribonucleotide Reductase
Length = 375
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 356 YLVGQIDSEVDTD 368
>gi|324112772|gb|EGC06748.1| ribonucleotide reductase [Escherichia fergusonii B253]
Length = 389
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 369
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 370 YLVGQIDSEVDTD 382
>gi|221316490|ref|ZP_03598295.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
subtilis subsp. subtilis str. NCIB 3610]
Length = 347
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 4/127 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++ I + P L T+EF + E LE + + ++
Sbjct: 218 RDEMKHSYFQTILVRDILTQYPELNTEEFSEFVYDFFTELVQLEREFCEDLYKNTPD-ID 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW---MSEVIDLKKEKNFFETRVTEYQQ 118
++Y+ + AN +GL+ +F +NP PW +++FFE + Y +
Sbjct: 277 IEEVKEYIGYRANLILDNLGLDQIFSAKKNPMPWITAFDPDNLNNTKRDFFEDKEVNYGK 336
Query: 119 GAELKWD 125
E K D
Sbjct: 337 ANEQKND 343
>gi|170019452|ref|YP_001724406.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
ATCC 8739]
gi|187775748|ref|ZP_02798054.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4196]
gi|188024880|ref|ZP_02774660.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4113]
gi|189010171|ref|ZP_02805091.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4076]
gi|189402101|ref|ZP_02779989.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4401]
gi|189403050|ref|ZP_02792862.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4486]
gi|189404930|ref|ZP_02812148.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC869]
gi|189405663|ref|ZP_02823406.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC508]
gi|208806716|ref|ZP_03249053.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4206]
gi|208812585|ref|ZP_03253914.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4045]
gi|208820390|ref|ZP_03260710.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4042]
gi|209398142|ref|YP_002271641.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4115]
gi|293415528|ref|ZP_06658171.1| ribonucleoside-diphosphate reductase [Escherichia coli B185]
gi|300948933|ref|ZP_07162994.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 116-1]
gi|300958921|ref|ZP_07171024.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 175-1]
gi|307138893|ref|ZP_07498249.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
H736]
gi|169754380|gb|ACA77079.1| Ribonucleoside-diphosphate reductase [Escherichia coli ATCC 8739]
gi|187771218|gb|EDU35062.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4196]
gi|188016038|gb|EDU54160.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4113]
gi|189002108|gb|EDU71094.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4076]
gi|189357709|gb|EDU76128.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4401]
gi|189362845|gb|EDU81264.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4486]
gi|189372811|gb|EDU91227.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC869]
gi|189378868|gb|EDU97284.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC508]
gi|208726517|gb|EDZ76118.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4206]
gi|208733862|gb|EDZ82549.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4045]
gi|208740513|gb|EDZ88195.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4042]
gi|209159542|gb|ACI36975.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4115]
gi|291433176|gb|EFF06155.1| ribonucleoside-diphosphate reductase [Escherichia coli B185]
gi|300314424|gb|EFJ64208.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 175-1]
gi|300451587|gb|EFK15207.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 116-1]
gi|315136867|dbj|BAJ44026.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
DH1]
gi|320192144|gb|EFW66789.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H7 str. EC1212]
gi|320641061|gb|EFX10540.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H7 str. G5101]
gi|320646450|gb|EFX15369.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H- str. 493-89]
gi|320651547|gb|EFX19927.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H- str. H 2687]
gi|320657299|gb|EFX25101.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320667818|gb|EFX34726.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H7 str. LSU-61]
gi|323936632|gb|EGB32918.1| ribonucleotide reductase [Escherichia coli E1520]
gi|323941071|gb|EGB37258.1| ribonucleotide reductase [Escherichia coli E482]
gi|326344044|gb|EGD67805.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H7 str. 1044]
Length = 389
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 369
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 370 YLVGQIDSEVDTD 382
>gi|168229641|ref|ZP_02654699.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|194471700|ref|ZP_03077684.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|238913487|ref|ZP_04657324.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
gi|194458064|gb|EDX46903.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|205335835|gb|EDZ22599.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
Length = 376
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVDTD 369
>gi|16761204|ref|NP_456821.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|29141101|ref|NP_804443.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|25285831|pir||AD0791 ribonucleoside-diphosphate reductase (EC 1.17.4.1) - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16503503|emb|CAD07510.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
enterica subsp. enterica serovar Typhi]
gi|29136727|gb|AAO68292.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
Length = 376
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVDTD 369
>gi|304445703|pdb|2XOF|A Chain A, Ribonucleotide Reductase Y122no2y Modified R2 Subunit Of
E. Coli
gi|304445704|pdb|2XOF|B Chain B, Ribonucleotide Reductase Y122no2y Modified R2 Subunit Of
E. Coli
Length = 375
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 356 YLVGQIDSEVDTD 368
>gi|291283479|ref|YP_003500297.1| Ribonucleoside-diphosphate reductase 1, beta subunit, B2
[Escherichia coli O55:H7 str. CB9615]
gi|290763352|gb|ADD57313.1| Ribonucleoside-diphosphate reductase 1, beta subunit, B2
[Escherichia coli O55:H7 str. CB9615]
Length = 389
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 369
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 370 YLVGQIDSEVDTD 382
>gi|255535950|ref|YP_003096321.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Flavobacteriaceae bacterium 3519-10]
gi|255342146|gb|ACU08259.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Flavobacteriaceae bacterium 3519-10]
Length = 324
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 4/120 (3%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVGLN 61
DE +H N GI +IN+I+ E P L T + T++ + LE ++
Sbjct: 194 DEQIHANAGIYLINKIREEQPDLLTDSDIEDIYTLVDHSIELEAEILDWIFEMGEIDNVS 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ +M++ + +IG++ + + + P W E + +FF R +Y +
Sbjct: 254 KENLLNFMKYRVDDSLKKIGMQTRYNVSGDEYRPMVWFEEEVFANSMDDFFAKRPVDYTK 313
>gi|117624429|ref|YP_853342.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
APEC O1]
gi|237704711|ref|ZP_04535192.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
3_2_53FAA]
gi|115513553|gb|ABJ01628.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
APEC O1]
gi|226901077|gb|EEH87336.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
3_2_53FAA]
gi|323952030|gb|EGB47904.1| ribonucleotide reductase [Escherichia coli H252]
gi|323956004|gb|EGB51757.1| ribonucleotide reductase [Escherichia coli H263]
Length = 420
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 281 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 340
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 341 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 400
Query: 116 YQQG 119
Y G
Sbjct: 401 YLVG 404
>gi|1942079|pdb|1XIK|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
gi|1942080|pdb|1XIK|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
gi|15825694|pdb|1JPR|A Chain A, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
Oxidized By Nitric Oxide
gi|15825695|pdb|1JPR|B Chain B, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
Oxidized By Nitric Oxide
gi|15826771|pdb|1JQC|A Chain A, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
Oxidized By Hydrogen Peroxide And Hydroxylamine
gi|15826772|pdb|1JQC|B Chain B, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
Oxidized By Hydrogen Peroxide And Hydroxylamine
gi|29726528|pdb|1MXR|A Chain A, High Resolution Structure Of Ribonucleotide Reductase R2
From E. Coli In Its Oxidised (Met) Form
gi|29726529|pdb|1MXR|B Chain B, High Resolution Structure Of Ribonucleotide Reductase R2
From E. Coli In Its Oxidised (Met) Form
Length = 375
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 356 YLVGQIDSEVDTD 368
>gi|323650974|ref|YP_004243617.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
subtilis subsp. natto]
gi|323461614|dbj|BAJ77030.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
subtilis subsp. natto]
Length = 347
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 4/127 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F ++ I + P L T+EF + E LE + + ++
Sbjct: 218 RDEMKHSYFQTILVRDILTQYPELNTEEFSEFVYDFFTELVQLEREFCEDLYKNTPD-ID 276
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW---MSEVIDLKKEKNFFETRVTEYQQ 118
++Y+ + AN +GL+ +F +NP PW +++FFE + Y +
Sbjct: 277 IEEVKEYIGYRANLILDNLGLDQIFAAKKNPMPWITAFDPDNLNNTKRDFFEDKEVNYGK 336
Query: 119 GAELKWD 125
E K D
Sbjct: 337 ANEQKND 343
>gi|262171721|ref|ZP_06039399.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
mimicus MB-451]
gi|261892797|gb|EEY38783.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
mimicus MB-451]
Length = 377
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +IN ++ +E +Q+S + +A E +A
Sbjct: 237 RDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQEKEWASYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GLEP + NP PW++ + + E ++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|189403970|ref|ZP_02786340.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4501]
gi|217327202|ref|ZP_03443285.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. TW14588]
gi|301026864|ref|ZP_07190263.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 196-1]
gi|301647674|ref|ZP_07247468.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 146-1]
gi|189368305|gb|EDU86721.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4501]
gi|217319569|gb|EEC27994.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. TW14588]
gi|260448673|gb|ACX39095.1| Ribonucleoside-diphosphate reductase [Escherichia coli DH1]
gi|299879524|gb|EFI87735.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 196-1]
gi|301074204|gb|EFK89010.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 146-1]
gi|326339582|gb|EGD63393.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H7 str. 1125]
Length = 393
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 313
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 373
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 374 YLVGQIDSEVDTD 386
>gi|61680624|pdb|1YFD|A Chain A, Crystal Structure Of The Y122h Mutant Of Ribonucleotide
Reductase R2 Protein From E. Coli
gi|61680625|pdb|1YFD|B Chain B, Crystal Structure Of The Y122h Mutant Of Ribonucleotide
Reductase R2 Protein From E. Coli
Length = 375
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 356 YLVGQIDSEVDTD 368
>gi|242238482|ref|YP_002986663.1| ribonucleotide-diphosphate reductase subunit beta [Dickeya dadantii
Ech703]
gi|242130539|gb|ACS84841.1| ribonucleotide reductase [Dickeya dadantii Ech703]
Length = 376
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E QQ+ + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRSGQDDPEMAKVAEECQQQCYDLFVMAAQQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q AE+ D
Sbjct: 357 YLVGQIDAEINAD 369
>gi|193068232|ref|ZP_03049196.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli E110019]
gi|300903617|ref|ZP_07121535.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 84-1]
gi|300926340|ref|ZP_07142140.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 182-1]
gi|301328725|ref|ZP_07221778.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 78-1]
gi|30041924|gb|AAP17650.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
flexneri 2a str. 2457T]
gi|56383622|gb|AAN43832.2| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
flexneri 2a str. 301]
gi|192958511|gb|EDV88950.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli E110019]
gi|300404353|gb|EFJ87891.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 84-1]
gi|300417617|gb|EFK00928.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 182-1]
gi|300844873|gb|EFK72633.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 78-1]
gi|315255170|gb|EFU35138.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 85-1]
Length = 389
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 369
Query: 116 YQQG 119
Y G
Sbjct: 370 YLVG 373
>gi|283832326|ref|ZP_06352067.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
youngae ATCC 29220]
gi|291071973|gb|EFE10082.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
youngae ATCC 29220]
Length = 376
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A L E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAALQEKEWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVDTD 369
>gi|262165506|ref|ZP_06033243.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
mimicus VM223]
gi|262025222|gb|EEY43890.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
mimicus VM223]
Length = 377
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +IN ++ +E +Q+S + +A E +A
Sbjct: 237 RDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQEKEWASYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GLEP + NP PW++ + + E ++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|258620211|ref|ZP_05715250.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
VM573]
gi|258587569|gb|EEW12279.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
VM573]
Length = 381
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +IN ++ +E +Q+S + +A E +A
Sbjct: 241 RDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQEKEWASYLFKDGS 300
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GLEP + NP PW++ + + E ++
Sbjct: 301 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWINAWLSSDNVQVAPQEAEIS 360
Query: 115 EYQQG 119
Y G
Sbjct: 361 SYLVG 365
>gi|258624428|ref|ZP_05719375.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
VM603]
gi|258583275|gb|EEW08077.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
VM603]
Length = 381
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +IN ++ +E +Q+S + +A E +A
Sbjct: 241 RDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQEKEWASYLFKDGS 300
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GLEP + NP PW++ + + E ++
Sbjct: 301 MIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWINAWLSSDNVQVAPQEAEIS 360
Query: 115 EYQQG 119
Y G
Sbjct: 361 SYLVG 365
>gi|271499642|ref|YP_003332667.1| ribonucleotide reductase [Dickeya dadantii Ech586]
gi|270343197|gb|ACZ75962.1| ribonucleotide reductase [Dickeya dadantii Ech586]
Length = 376
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E QQ+ + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRAGQDDPEMAQIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEINTD 369
>gi|331663742|ref|ZP_08364652.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli TA143]
gi|323977567|gb|EGB72653.1| ribonucleotide reductase [Escherichia coli TW10509]
gi|331059541|gb|EGI31518.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli TA143]
Length = 389
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 369
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 370 YLVGQIDSEVDTD 382
>gi|15802782|ref|NP_288809.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H7 EDL933]
gi|15832372|ref|NP_311145.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H7 str. Sakai]
gi|16130170|ref|NP_416738.1| ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like
protein [Escherichia coli str. K-12 substr. MG1655]
gi|82544520|ref|YP_408467.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
Sb227]
gi|82777644|ref|YP_403993.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
dysenteriae Sd197]
gi|89109052|ref|AP_002832.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
[Escherichia coli str. K-12 substr. W3110]
gi|157161718|ref|YP_001459036.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
HS]
gi|170081853|ref|YP_001731173.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
protein [Escherichia coli str. K-12 substr. DH10B]
gi|187731010|ref|YP_001881065.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
CDC 3083-94]
gi|188495860|ref|ZP_03003130.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli 53638]
gi|195935609|ref|ZP_03080991.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H7 str. EC4024]
gi|218548311|ref|YP_002382102.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia
fergusonii ATCC 35469]
gi|218705765|ref|YP_002413284.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
UMN026]
gi|238901409|ref|YP_002927205.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
protein [Escherichia coli BW2952]
gi|254794126|ref|YP_003078963.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H7 str. TW14359]
gi|256022083|ref|ZP_05435948.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
4_1_40B]
gi|261223312|ref|ZP_05937593.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H7 str. FRIK2000]
gi|261259138|ref|ZP_05951671.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H7 str. FRIK966]
gi|293405702|ref|ZP_06649694.1| nrdB [Escherichia coli FVEC1412]
gi|293410599|ref|ZP_06654175.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
gi|298381383|ref|ZP_06990982.1| nrdB [Escherichia coli FVEC1302]
gi|309785072|ref|ZP_07679705.1| ribonucleoside-diphosphate reductase 1, subunit beta [Shigella
dysenteriae 1617]
gi|312973510|ref|ZP_07787682.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
coli 1827-70]
gi|57014104|sp|P69924|RIR2_ECOLI RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta;
AltName: Full=Protein B2; AltName: Full=Protein R2;
AltName: Full=Ribonucleotide reductase 1
gi|57014105|sp|P69925|RIR2_ECO57 RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta;
AltName: Full=Protein B2; AltName: Full=Protein R2;
AltName: Full=Ribonucleotide reductase 1
gi|12516573|gb|AAG57364.1|AE005456_1 ribonucleoside diphosphage reductase 1, beta subunit, B2
[Escherichia coli O157:H7 str. EDL933]
gi|146967|gb|AAA24224.1| ribonucleoside diphosphate reductase B2 subunit precursor
[Escherichia coli]
gi|1788567|gb|AAC75295.1| ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like
protein [Escherichia coli str. K-12 substr. MG1655]
gi|1799582|dbj|BAA16054.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
[Escherichia coli str. K12 substr. W3110]
gi|13362587|dbj|BAB36541.1| ribonucleoside-diphosphate reductase 1 beta subunit [Escherichia
coli O157:H7 str. Sakai]
gi|81241792|gb|ABB62502.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
dysenteriae Sd197]
gi|81245931|gb|ABB66639.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
boydii Sb227]
gi|157067398|gb|ABV06653.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli HS]
gi|169889688|gb|ACB03395.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
protein [Escherichia coli str. K-12 substr. DH10B]
gi|187428002|gb|ACD07276.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella boydii
CDC 3083-94]
gi|188491059|gb|EDU66162.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli 53638]
gi|218355852|emb|CAQ88465.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
[Escherichia fergusonii ATCC 35469]
gi|218432862|emb|CAR13756.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
[Escherichia coli UMN026]
gi|238863475|gb|ACR65473.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
protein [Escherichia coli BW2952]
gi|254593526|gb|ACT72887.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
protein [Escherichia coli O157:H7 str. TW14359]
gi|284922226|emb|CBG35308.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
042]
gi|291427910|gb|EFF00937.1| nrdB [Escherichia coli FVEC1412]
gi|291471067|gb|EFF13551.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
gi|298278825|gb|EFI20339.1| nrdB [Escherichia coli FVEC1302]
gi|308927442|gb|EFP72916.1| ribonucleoside-diphosphate reductase 1, subunit beta [Shigella
dysenteriae 1617]
gi|309702545|emb|CBJ01872.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
ETEC H10407]
gi|310332105|gb|EFP99340.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
coli 1827-70]
gi|315615496|gb|EFU96128.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
coli 3431]
gi|320184866|gb|EFW59654.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
flexneri CDC 796-83]
gi|320663001|gb|EFX30318.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O55:H7 str. USDA 5905]
gi|327252504|gb|EGE64163.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
coli STEC_7v]
gi|332094036|gb|EGI99088.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
boydii 3594-74]
Length = 376
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVDTD 369
>gi|320175005|gb|EFW50120.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
dysenteriae CDC 74-1112]
Length = 376
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVDTD 369
>gi|90581239|ref|ZP_01237037.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio angustum
S14]
gi|90437610|gb|EAS62803.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio angustum
S14]
Length = 377
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E +Q+ + A E +A
Sbjct: 237 RDEALHLTGTQHILNLLRNGHDDPEMAEIAAECEQECFDIFKAAAEQEKEWADYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL P + T+NP PW++ + + E ++
Sbjct: 297 MIGLNKQILCQYVEYITNLRMVAVGLRPAYDGATQNPIPWINSWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|300936793|ref|ZP_07151685.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 21-1]
gi|300458078|gb|EFK21571.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 21-1]
Length = 405
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 266 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 325
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 326 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 385
Query: 116 YQQG 119
Y G
Sbjct: 386 YLVG 389
>gi|312967536|ref|ZP_07781751.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
coli 2362-75]
gi|312287733|gb|EFR15638.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
coli 2362-75]
Length = 359
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 220 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 279
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 280 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 339
Query: 116 YQQG 119
Y G
Sbjct: 340 YLVG 343
>gi|194427189|ref|ZP_03059740.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli B171]
gi|194436109|ref|ZP_03068211.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli 101-1]
gi|300918603|ref|ZP_07135191.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 115-1]
gi|300931418|ref|ZP_07146747.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 187-1]
gi|301303305|ref|ZP_07209430.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 124-1]
gi|194414810|gb|EDX31081.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli B171]
gi|194424837|gb|EDX40822.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli 101-1]
gi|300414255|gb|EFJ97565.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 115-1]
gi|300460788|gb|EFK24281.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 187-1]
gi|300841479|gb|EFK69239.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 124-1]
gi|323961541|gb|EGB57149.1| ribonucleotide reductase [Escherichia coli H489]
gi|323973062|gb|EGB68256.1| ribonucleotide reductase [Escherichia coli TA007]
Length = 393
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 313
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 373
Query: 116 YQQG 119
Y G
Sbjct: 374 YLVG 377
>gi|300897697|ref|ZP_07116095.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 198-1]
gi|301022393|ref|ZP_07186277.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 69-1]
gi|331683911|ref|ZP_08384507.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli H299]
gi|300358575|gb|EFJ74445.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 198-1]
gi|300397543|gb|EFJ81081.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 69-1]
gi|323967677|gb|EGB63089.1| ribonucleotide reductase [Escherichia coli M863]
gi|331078863|gb|EGI50065.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli H299]
Length = 393
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 313
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 373
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 374 YLVGQIDSEVDTD 386
>gi|90407600|ref|ZP_01215781.1| ribonucleoside-diphosphate reductase beta chain [Psychromonas sp.
CNPT3]
gi|90311303|gb|EAS39407.1| ribonucleoside-diphosphate reductase beta chain [Psychromonas sp.
CNPT3]
Length = 424
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGL 60
++E LH NFGID+I IK ENP + +E+QQ RT+ +A E +
Sbjct: 293 KEEQLHGNFGIDLIQIIKQENPSWFNEEYQQSVRTLCLQAFKSESKIIDWIYAEGELDFI 352
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQ 117
+++++ N+ I +E +F+ E W + I K +FF R Y
Sbjct: 353 PKAQVKEFIKNRFNQSLQSIDIEKVFEIDEKLLEKTEWFDDEIIGTKHGDFFVKRSINYN 412
Query: 118 QGAE 121
+ ++
Sbjct: 413 KRSK 416
>gi|300776394|ref|ZP_07086252.1| ribonucleoside-diphosphate reductase [Chryseobacterium gleum ATCC
35910]
gi|300501904|gb|EFK33044.1| ribonucleoside-diphosphate reductase [Chryseobacterium gleum ATCC
35910]
Length = 371
Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 4/120 (3%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGLN 61
DE +H N GI +IN+I+ E P L T + T++ E+ E ++
Sbjct: 241 DEQIHANAGIYLINKIREEQPDLLTDSDIEDIYTLVDESIAREGDILSWIFELGEIDNVS 300
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+M++ + +I ++ + T P W E + +FF R +Y +
Sbjct: 301 KEDLLNFMKYRVDDSLKKINMKTRYNITPEQYRPMVWFEEEVFANSLDDFFAKRPVDYTK 360
>gi|331658316|ref|ZP_08359278.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli TA206]
gi|307626227|gb|ADN70531.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
UM146]
gi|331056564|gb|EGI28573.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli TA206]
Length = 389
Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 250 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 309
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 310 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 369
Query: 116 YQQG 119
Y G
Sbjct: 370 YLVG 373
>gi|282600304|ref|ZP_05973774.2| ribonucleoside-diphosphate reductase, beta subunit [Providencia
rustigianii DSM 4541]
gi|282565783|gb|EFB71318.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
rustigianii DSM 4541]
Length = 380
Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ ++P + E +++ + +A E +A
Sbjct: 241 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEEQCYQLFVDAAEQEKEWAEYLFSEGS 300
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 301 MIGLNKEILCQYVEYITNIRMQAVGLKLPFEARSNPIPWINAWLVSDNVQVAPQEVEVSS 360
Query: 116 YQQG 119
Y G
Sbjct: 361 YLVG 364
>gi|218690398|ref|YP_002398610.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
ED1a]
gi|218427962|emb|CAR08882.2| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
[Escherichia coli ED1a]
Length = 376
Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|26248623|ref|NP_754663.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
CFT073]
gi|74312755|ref|YP_311174.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sonnei
Ss046]
gi|91211528|ref|YP_541514.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
UTI89]
gi|110642443|ref|YP_670173.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
536]
gi|157157492|ref|YP_001463584.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
E24377A]
gi|161485800|ref|NP_708125.3| ribonucleotide-diphosphate reductase subunit beta [Shigella
flexneri 2a str. 301]
gi|161486465|ref|NP_837840.2| ribonucleotide-diphosphate reductase subunit beta [Shigella
flexneri 2a str. 2457T]
gi|191166513|ref|ZP_03028343.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli B7A]
gi|191170278|ref|ZP_03031832.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli F11]
gi|194433322|ref|ZP_03065602.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella
dysenteriae 1012]
gi|209919687|ref|YP_002293771.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
SE11]
gi|215487452|ref|YP_002329883.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O127:H6 str. E2348/69]
gi|218554798|ref|YP_002387711.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
IAI1]
gi|218559152|ref|YP_002392065.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
S88]
gi|218695841|ref|YP_002403508.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
55989]
gi|218700706|ref|YP_002408335.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
IAI39]
gi|227887293|ref|ZP_04005098.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli 83972]
gi|253772842|ref|YP_003035673.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162246|ref|YP_003045354.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
B str. REL606]
gi|256017603|ref|ZP_05431468.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
gi|260844831|ref|YP_003222609.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
coli O103:H2 str. 12009]
gi|260856285|ref|YP_003230176.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
coli O26:H11 str. 11368]
gi|260868965|ref|YP_003235367.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
coli O111:H- str. 11128]
gi|293446578|ref|ZP_06663000.1| ribonucleoside-diphosphate reductase [Escherichia coli B088]
gi|300818165|ref|ZP_07098377.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 107-1]
gi|300822109|ref|ZP_07102251.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 119-7]
gi|300981251|ref|ZP_07175428.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 200-1]
gi|300983269|ref|ZP_07176508.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 45-1]
gi|301048988|ref|ZP_07195975.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 185-1]
gi|306814652|ref|ZP_07448814.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
NC101]
gi|307311198|ref|ZP_07590842.1| ribonucleotide reductase [Escherichia coli W]
gi|309793115|ref|ZP_07687543.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 145-7]
gi|331647890|ref|ZP_08348982.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli M605]
gi|331668939|ref|ZP_08369787.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli TA271]
gi|331678186|ref|ZP_08378861.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli H591]
gi|26109028|gb|AAN81231.1|AE016763_190 Ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
CFT073]
gi|73856232|gb|AAZ88939.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
sonnei Ss046]
gi|91073102|gb|ABE07983.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
UTI89]
gi|110344035|gb|ABG70272.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
536]
gi|157079522|gb|ABV19230.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli E24377A]
gi|190903473|gb|EDV63192.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli B7A]
gi|190909794|gb|EDV69379.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli F11]
gi|194418416|gb|EDX34505.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella
dysenteriae 1012]
gi|209912946|dbj|BAG78020.1| ribonucleoside diphosphate reductase beta subunit [Escherichia coli
SE11]
gi|215265524|emb|CAS09927.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
[Escherichia coli O127:H6 str. E2348/69]
gi|218352573|emb|CAU98352.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
[Escherichia coli 55989]
gi|218361566|emb|CAQ99157.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
[Escherichia coli IAI1]
gi|218365921|emb|CAR03663.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
[Escherichia coli S88]
gi|218370692|emb|CAR18503.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
[Escherichia coli IAI39]
gi|222033996|emb|CAP76737.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
coli LF82]
gi|227835643|gb|EEJ46109.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli 83972]
gi|242377869|emb|CAQ32637.1| nrdB, subunit of B2 protein and GDP reductase [multifunctional]
[Escherichia coli BL21(DE3)]
gi|253323886|gb|ACT28488.1| ribonucleotide reductase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253974147|gb|ACT39818.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
B str. REL606]
gi|253978314|gb|ACT43984.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
BL21(DE3)]
gi|257754934|dbj|BAI26436.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
coli O26:H11 str. 11368]
gi|257759978|dbj|BAI31475.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
coli O103:H2 str. 12009]
gi|257765321|dbj|BAI36816.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
coli O111:H- str. 11128]
gi|281179326|dbj|BAI55656.1| ribonucleoside diphosphate reductase beta subunit [Escherichia coli
SE15]
gi|291323408|gb|EFE62836.1| ribonucleoside-diphosphate reductase [Escherichia coli B088]
gi|294490302|gb|ADE89058.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli IHE3034]
gi|300299180|gb|EFJ55565.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 185-1]
gi|300307615|gb|EFJ62135.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 200-1]
gi|300408603|gb|EFJ92141.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 45-1]
gi|300525239|gb|EFK46308.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 119-7]
gi|300529309|gb|EFK50371.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 107-1]
gi|305852046|gb|EFM52498.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
NC101]
gi|306908704|gb|EFN39201.1| ribonucleotide reductase [Escherichia coli W]
gi|307554301|gb|ADN47076.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
protein [Escherichia coli ABU 83972]
gi|308123401|gb|EFO60663.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 145-7]
gi|312946856|gb|ADR27683.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O83:H1 str. NRG 857C]
gi|313651060|gb|EFS15459.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
flexneri 2a str. 2457T]
gi|315061535|gb|ADT75862.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
[Escherichia coli W]
gi|315292180|gb|EFU51532.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 153-1]
gi|320178793|gb|EFW53756.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
ATCC 9905]
gi|320196104|gb|EFW70728.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
WV_060327]
gi|320199830|gb|EFW74419.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
EC4100B]
gi|323156512|gb|EFZ42666.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
coli EPECa14]
gi|323161696|gb|EFZ47579.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
coli E128010]
gi|323168602|gb|EFZ54282.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
sonnei 53G]
gi|323171914|gb|EFZ57558.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
coli LT-68]
gi|323176838|gb|EFZ62428.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
coli 1180]
gi|323184146|gb|EFZ69523.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
coli 1357]
gi|323188037|gb|EFZ73332.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
coli RN587/1]
gi|323377884|gb|ADX50152.1| Ribonucleoside-diphosphate reductase [Escherichia coli KO11]
gi|324006608|gb|EGB75827.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 57-2]
gi|324013118|gb|EGB82337.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 60-1]
gi|324117882|gb|EGC11781.1| ribonucleotide reductase [Escherichia coli E1167]
gi|325496725|gb|EGC94584.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia
fergusonii ECD227]
gi|330912066|gb|EGH40576.1| ribonucleotide reductase of class 1a (aerobic), beta subunit
[Escherichia coli AA86]
gi|331043614|gb|EGI15752.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli M605]
gi|331064133|gb|EGI36044.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli TA271]
gi|331074646|gb|EGI45966.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli H591]
gi|332096162|gb|EGJ01165.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
dysenteriae 155-74]
Length = 376
Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|332093862|gb|EGI98916.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
boydii 5216-82]
Length = 376
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|237732274|ref|ZP_04562755.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
30_2]
gi|226907813|gb|EEH93731.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
30_2]
Length = 376
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A L E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAALQEKEWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|146312444|ref|YP_001177518.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter sp.
638]
gi|145319320|gb|ABP61467.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Enterobacter sp. 638]
Length = 376
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + A L E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVLAALQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GLE FK NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLELPFKTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVNTD 369
>gi|170767354|ref|ZP_02901807.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
albertii TW07627]
gi|170123688|gb|EDS92619.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
albertii TW07627]
Length = 376
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|262274472|ref|ZP_06052283.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
[Grimontia hollisae CIP 101886]
gi|262221035|gb|EEY72349.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
[Grimontia hollisae CIP 101886]
Length = 360
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHE----ATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ + E ++ + + A E +A
Sbjct: 220 RDEALHLTSTQHMLNILRSGDDDPEMAEIAKECEQVCFDLFKNAAEQEKEWAEYLFKDGS 279
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL+P + +NP PW++ + + E ++
Sbjct: 280 MIGLNKDILCQYVEYITNLRMAAVGLKPAYQGANQNPIPWINAWLSSDNVQVAPQEAEIS 339
Query: 115 EYQQG 119
Y G
Sbjct: 340 SYLVG 344
>gi|157144813|ref|YP_001452132.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter
koseri ATCC BAA-895]
gi|157082018|gb|ABV11696.1| hypothetical protein CKO_00540 [Citrobacter koseri ATCC BAA-895]
Length = 376
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ I++P + +E +Q + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGIDDPEMAEIAEESKQACYDLFVQAAQQEKEWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GLE F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLELPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVDTD 369
>gi|24373963|ref|NP_718006.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
oneidensis MR-1]
gi|24348405|gb|AAN55450.1|AE015682_5 ribonucleoside-diphosphate reductase, beta subunit [Shewanella
oneidensis MR-1]
Length = 376
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN ++ ++ ++P + E QQ++ + +A E +A
Sbjct: 237 RDEALHLNSTQHILTIMQGGKDDPEMGEIAIECQQEAYNLFLKAAEQEKEWAKYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N+R + L + NP PWM ++ + E V+
Sbjct: 297 MIGLNEQILCQYVEYITNQRMKSVNLPQPYAEQTNPLPWMKNWLESDAVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|170682190|ref|YP_001744431.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
SMS-3-5]
gi|170519908|gb|ACB18086.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli SMS-3-5]
gi|315285847|gb|EFU45287.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 110-3]
gi|315298059|gb|EFU57328.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 16-3]
Length = 393
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 313
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 373
Query: 116 YQQG 119
Y G
Sbjct: 374 YLVG 377
>gi|27366311|ref|NP_761839.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
vulnificus CMCP6]
gi|37679427|ref|NP_934036.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
vulnificus YJ016]
gi|320156821|ref|YP_004189200.1| ribonucleotide reductase of class Ia (aerobic), subunit beta
[Vibrio vulnificus MO6-24/O]
gi|27362512|gb|AAO11366.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Vibrio vulnificus CMCP6]
gi|37198171|dbj|BAC94007.1| ribonucleotide reductase, beta subunit [Vibrio vulnificus YJ016]
gi|319932133|gb|ADV86997.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
[Vibrio vulnificus MO6-24/O]
Length = 377
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSR----TMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN +IN ++ + ++++ + EA E +A
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQQCFDLFKEAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL + T NP PW++ + + E ++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPVAYPNATSNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|156933156|ref|YP_001437072.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter
sakazakii ATCC BAA-894]
gi|156531410|gb|ABU76236.1| hypothetical protein ESA_00966 [Cronobacter sakazakii ATCC BAA-894]
Length = 376
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ ++P + +E +Q+ + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRSGEDDPEMAAIAEECKQECYDLFVLAAQQEKEWAEYLFQGGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ FK NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFKTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|283786035|ref|YP_003365900.1| ribonucleoside-diphosphate reductase 1 beta chain [Citrobacter
rodentium ICC168]
gi|282949489|emb|CBG89102.1| ribonucleoside-diphosphate reductase 1 beta chain [Citrobacter
rodentium ICC168]
Length = 376
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A L E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAALQEKEWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVDTD 369
>gi|260598671|ref|YP_003211242.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter
turicensis z3032]
gi|260217848|emb|CBA32365.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Cronobacter
turicensis z3032]
Length = 376
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ ++P + +E +Q+ + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRSGEDDPEMAIIAEECKQECYDLFVLAAQQEKEWAEYLFQGGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ FK NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFKTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|308187586|ref|YP_003931717.1| ribonucleoside-diphosphate reductase 1 beta chain [Pantoea vagans
C9-1]
gi|308058096|gb|ADO10268.1| ribonucleoside-diphosphate reductase 1 beta chain [Pantoea vagans
C9-1]
Length = 376
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHE----ATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ KE + R E A L E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGEDDPEMKEIAAECREECFELFKKAALQEKEWAEYLFSGGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|304398198|ref|ZP_07380072.1| ribonucleotide reductase [Pantoea sp. aB]
gi|304354064|gb|EFM18437.1| ribonucleotide reductase [Pantoea sp. aB]
Length = 376
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHE----ATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ KE + R E A L E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGEDDPEMKEIAAECREECFELFKKAALQEKEWAEYLFSGGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|311977695|ref|YP_003986815.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba
polyphaga mimivirus]
gi|77416594|sp|Q7T6Y9|RIR2_MIMIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|55664859|gb|AAQ09571.2| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
mimivirus]
gi|308204332|gb|ADO18133.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba
polyphaga mimivirus]
Length = 417
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+ H+ + + + ++ EA +E + ++++P +G+N
Sbjct: 295 RDENKHVELACIMYSLLNNRLKE-------SVVYQIIDEAIEIEEEFINDSLPCKLLGMN 347
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ QY++++A+R +G F +NPF +M + ID+ + NFFE R Y
Sbjct: 348 SELMSQYIKYVADRLLVDLGYRKKFNV-DNPFEYMKK-IDVFVKANFFEKRNDAYSNA 403
>gi|269862698|ref|XP_002650940.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220065381|gb|EED43116.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 332
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + I + ++ EA +E + E++P +G+N
Sbjct: 247 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 297
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
QY++F+A+R +G + ++ + PF +M
Sbjct: 298 CKLMCQYIEFVADRLLFALGEKKIYNVST-PFDFME 332
>gi|114563305|ref|YP_750818.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
frigidimarina NCIMB 400]
gi|114334598|gb|ABI71980.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Shewanella frigidimarina NCIMB 400]
Length = 376
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN ++ ++ ++P + E +Q++ + +A E +A
Sbjct: 237 RDEALHLNSTQHILALMQGGKDDPEMGEIAAECKQEAYDLFVKAAEQEKEWAKYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY++FI N+R + L + NP PWM ++ + E V+
Sbjct: 297 MIGLNEQILCQYVEFITNQRMKSVHLPQPYDEQSNPLPWMKNWLESDAVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q + + D
Sbjct: 357 YLVGQIDSSVDGD 369
>gi|91227184|ref|ZP_01261643.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
alginolyticus 12G01]
gi|262393879|ref|YP_003285733.1| ribonucleotide reductase of class Ia (aerobic) subunit beta [Vibrio
sp. Ex25]
gi|269967067|ref|ZP_06181135.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
alginolyticus 40B]
gi|91188712|gb|EAS75000.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
alginolyticus 12G01]
gi|262337473|gb|ACY51268.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
sp. Ex25]
gi|269828326|gb|EEZ82592.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
alginolyticus 40B]
Length = 377
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSR----TMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN +IN ++ + ++++ + EA E +A
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL + T NP PW++ + + E ++
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|325955614|ref|YP_004239274.1| ribonucleotide reductase [Weeksella virosa DSM 16922]
gi|323438232|gb|ADX68696.1| ribonucleotide reductase [Weeksella virosa DSM 16922]
Length = 324
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGLN 61
DE +H N GI ++N+IK E P +++E Q+ + ++ + +E +
Sbjct: 194 DEQIHANAGIYIVNKIKEEFPDFFSEETIQEIKNVVTHSIEVESQILDWIFEQGEIETIK 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+M++ + +IG ++ T P W E + +FF R +Y +
Sbjct: 254 KKDLLNFMKYRVDESMLKIGFGKIYNITAEQYQPMVWFEEEVFANSLDDFFAKRPVDYTK 313
>gi|9629834|ref|NP_045318.1| ribonucleotide reductase subunit 2 [Bovine herpesvirus 1]
gi|266916|sp|Q01319|RIR2_BHV1C RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|330772|gb|AAA46063.1| ribonucleotide reductase small subunit [Bovine herpesvirus 1]
gi|995642|emb|CAA90928.1| UL40 [Bovine herpesvirus 1]
gi|1149578|emb|CAA88899.1| UL40 [Bovine herpesvirus 1]
gi|2653307|emb|CAA06093.1| ribonucleotide reductase small subunit [Bovine herpesvirus type
1.1]
Length = 314
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 7/123 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + + + + + EA L A P+G L+
Sbjct: 198 RDEAVHTAASCCIFDNYLGGE-----RPPPARIYELFREAWKLS-ASLFGCAPRGSHILD 251
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ Y+++ A+R I L PLF + ++ +K NFFE R T Y G
Sbjct: 252 VEAISAYVEYSADRLLAAIQLPPLFGTPPPGTDFPLALMTAEKHTNFFERRSTNY-TGTV 310
Query: 122 LKW 124
+
Sbjct: 311 IND 313
>gi|307129979|ref|YP_003881995.1| Ribonucleotide reductase of class Ia (aerobic), subunit beta
[Dickeya dadantii 3937]
gi|306527508|gb|ADM97438.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Dickeya dadantii 3937]
Length = 376
Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E QQ+ + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRAGQDDPEMAKIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|152971181|ref|YP_001336290.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206577425|ref|YP_002237361.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
pneumoniae 342]
gi|262043285|ref|ZP_06016416.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|288934289|ref|YP_003438348.1| ribonucleotide reductase [Klebsiella variicola At-22]
gi|330000612|ref|ZP_08303755.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
MS 92-3]
gi|150956030|gb|ABR78060.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206566483|gb|ACI08259.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
pneumoniae 342]
gi|259039384|gb|EEW40524.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|288889018|gb|ADC57336.1| ribonucleotide reductase [Klebsiella variicola At-22]
gi|328537954|gb|EGF64133.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
MS 92-3]
Length = 376
Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVDAD 369
>gi|28898709|ref|NP_798314.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
parahaemolyticus RIMD 2210633]
gi|153839553|ref|ZP_01992220.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
parahaemolyticus AQ3810]
gi|260363692|ref|ZP_05776476.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
parahaemolyticus K5030]
gi|260879741|ref|ZP_05892096.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
parahaemolyticus AN-5034]
gi|260898785|ref|ZP_05907226.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
parahaemolyticus Peru-466]
gi|260901598|ref|ZP_05909993.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
parahaemolyticus AQ4037]
gi|28806927|dbj|BAC60198.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
parahaemolyticus RIMD 2210633]
gi|149746934|gb|EDM57922.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
parahaemolyticus AQ3810]
gi|308086689|gb|EFO36384.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
parahaemolyticus Peru-466]
gi|308093260|gb|EFO42955.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
parahaemolyticus AN-5034]
gi|308108691|gb|EFO46231.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
parahaemolyticus AQ4037]
gi|308113401|gb|EFO50941.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
parahaemolyticus K5030]
Length = 377
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSR----TMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN +IN ++ + ++++ + EA E +A
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL + T NP PW++ + + E ++
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|332162349|ref|YP_004298926.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|318606422|emb|CBY27920.1| ribonucleotide reductase of class Ia (aerobic),beta subunit
[Yersinia enterocolitica subsp. palearctica Y11]
gi|325666579|gb|ADZ43223.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330864218|emb|CBX74276.1| ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
enterocolitica W22703]
Length = 376
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E QQ+ + A E +A
Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F NP PW++ + + E V+
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWINSWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVSAD 369
>gi|88859281|ref|ZP_01133921.1| ribonucleotide-diphosphate reductase beta subunit
[Pseudoalteromonas tunicata D2]
gi|88818298|gb|EAR28113.1| ribonucleotide-diphosphate reductase beta subunit
[Pseudoalteromonas tunicata D2]
Length = 376
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL+ ++N ++ ++P + + +++S M A E +A
Sbjct: 237 RDEALHLSGTQHMLNIMQDGQDDPEMAIVAAQLREESIEMFRTAAQQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F T NP PW++ + + E ++
Sbjct: 297 MIGLNKDILCQYVEYITNVRMSAVGLPQQFSITSNPIPWINSWLVSDNVQVAPQEAEISS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|126174279|ref|YP_001050428.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
baltica OS155]
gi|125997484|gb|ABN61559.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Shewanella baltica OS155]
Length = 376
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN +++ ++ ++P + E QQ++ + +A E +A
Sbjct: 237 RDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQEKEWAKYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY++FI N+R + L + NP PWM ++ + E V+
Sbjct: 297 MIGLNEQILCQYVEFITNQRMKSVNLPQPYLEITNPLPWMKNWLESDAVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q + + D
Sbjct: 357 YLVGQIDSAVDSD 369
>gi|328474726|gb|EGF45531.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
parahaemolyticus 10329]
Length = 377
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSR----TMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN +IN ++ + ++++ + EA E +A
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL + T NP PW++ + + E ++
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|300717619|ref|YP_003742422.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
billingiae Eb661]
gi|299063455|emb|CAX60575.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
billingiae Eb661]
Length = 376
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGEDDPEMAEIARESRQECYDLFVLAAQQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R H +GL+ FK NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYIEYITNIRMHAVGLDLPFKTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|123441721|ref|YP_001005705.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122088682|emb|CAL11484.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 376
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E QQ+ + A E +A
Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F NP PW++ + + E V+
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGIPFNTRTNPIPWINSWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVSAD 369
>gi|153835812|ref|ZP_01988479.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio harveyi
HY01]
gi|148867435|gb|EDL66832.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio harveyi
HY01]
Length = 377
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSR----TMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN +IN ++ + ++++ + EA E +A
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQECFDLFKEAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL + T NP PW++ + + E ++
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATSNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|293395206|ref|ZP_06639492.1| ribonucleoside-diphosphate reductase [Serratia odorifera DSM 4582]
gi|291422383|gb|EFE95626.1| ribonucleoside-diphosphate reductase [Serratia odorifera DSM 4582]
Length = 376
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWTK--EFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ ++P + E QQ+ + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQEKEWAEYLFSGGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL FK NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGAPFKTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEINAD 369
>gi|269102947|ref|ZP_06155644.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268162845|gb|EEZ41341.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 377
Score = 77.7 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + KE + + + A E +A
Sbjct: 237 RDEALHLTGTQHILNLLRNGHDDPEMAEIAKESEAECFDIFKRAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R + +GLE + T+NP PW++ + + E ++
Sbjct: 297 MIGLNKDILCQYVEYITNLRMNAVGLEHAYTGATQNPIPWINSWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|330445621|ref|ZP_08309273.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328489812|dbj|GAA03770.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 377
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWTK--EFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E +Q+ + A E +A
Sbjct: 237 RDEALHLTGTQHILNLLRTGQDDPEMAEIAVECEQECFDIFKSAAEQEKDWADYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL P ++ T+NP PW++ + + E ++
Sbjct: 297 MIGLNKQILCQYVEYITNLRMSAVGLRPAYEGATQNPIPWINSWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|296103863|ref|YP_003614009.1| ribonucleotide-diphosphate reductase beta subunit [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295058322|gb|ADF63060.1| ribonucleotide-diphosphate reductase beta subunit [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 376
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVNTD 369
>gi|238920521|ref|YP_002934036.1| ribonucleotide-diphosphate reductase subunit beta [Edwardsiella
ictaluri 93-146]
gi|238870090|gb|ACR69801.1| ribonucleoside-diphosphate reductase, beta subunit, putative
[Edwardsiella ictaluri 93-146]
Length = 376
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E + + +A E +A
Sbjct: 237 RDEALHLTGTQHILNLMRAGQDDPEMAEIATECASQCYDLFVQAAQQEKEWAGYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLPLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|238751211|ref|ZP_04612705.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
rohdei ATCC 43380]
gi|238710485|gb|EEQ02709.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
rohdei ATCC 43380]
Length = 399
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWTK--EFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E QQ+ + A E +A
Sbjct: 260 RDEALHLTGTQHILNLMRSGEDDPEMAEIAVECQQQCYDLFVLAAEQEKEWAEYLFRDGS 319
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL FK NP PW++ + + E V+
Sbjct: 320 MIGLNKEILCQYVEYITNIRMQAVGLGTPFKTRTNPIPWINSWLVSDNVQVAPQEVEVSS 379
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 380 YLVGQIDSEISAD 392
>gi|156975012|ref|YP_001445919.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio harveyi
ATCC BAA-1116]
gi|156526606|gb|ABU71692.1| hypothetical protein VIBHAR_02734 [Vibrio harveyi ATCC BAA-1116]
Length = 377
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN +IN ++ +E +Q+ + EA E +A
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFLFMQIAEEEKQECFDLFKEAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL + T NP PW++ + + E ++
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATSNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|254230294|ref|ZP_04923683.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio sp.
Ex25]
gi|151937191|gb|EDN56060.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio sp.
Ex25]
Length = 242
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSR----TMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN +IN ++ + ++++ + EA E +A
Sbjct: 102 RDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 161
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL + T NP PW++ + + E ++
Sbjct: 162 MIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWINAWLSSDNVQVAPQEAEIS 221
Query: 115 EYQQG 119
Y G
Sbjct: 222 SYLVG 226
>gi|82492124|gb|ABB77921.1| ribonucleotide reductase beta chain [Environmental halophage 1
AAJ-2005]
Length = 358
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF-VGL 60
++E +H FG +++ I+ ENP L+ +F + + +A E + G L
Sbjct: 227 KEEQIHGLFGQELVETIREENPDLFDDDFTDEIQDACQQAYEAESEILDWILEDGELDFL 286
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
+ +++ N+ G++P+F E+ W E I + KE +FF R T Y
Sbjct: 287 PREHIDAFLKDRFNQSLDNAGVDPVFDPDEDVVDETRWFDEDIMMTKENDFFSKRSTTYN 346
Query: 118 QGAE 121
+ +
Sbjct: 347 KHTQ 350
>gi|238753722|ref|ZP_04615083.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
ruckeri ATCC 29473]
gi|238707958|gb|EEQ00315.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
ruckeri ATCC 29473]
Length = 376
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWTK--EFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E QQ+ + A E +A
Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAVECQQQCYDLFVLAAEQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL FK NP PW++ + + E V+
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGTPFKTRTNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEISAD 369
>gi|149197800|ref|ZP_01874849.1| ribonucleotide-diphosphate reductase beta subunit [Lentisphaera
araneosa HTCC2155]
gi|149139021|gb|EDM27425.1| ribonucleotide-diphosphate reductase beta subunit [Lentisphaera
araneosa HTCC2155]
Length = 376
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +I + ++P + E + + + A E +A
Sbjct: 237 RDEALHLTGTQQMIQIFREGKDDPEMAEIAAECEGQVYQIFSSAAEQEKEWAKFLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLNA Y+++I N R G + +F T+NP PWM+ + + E ++
Sbjct: 297 MIGLNADILGDYVEYITNVRLKASGYKNVFPTTQNPLPWMNSWLSSDAVQVAPQEVELSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVSED 369
>gi|59912|emb|CAA24930.1| unnamed protein product [Human herpesvirus 2]
Length = 337
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N ++ K + + EA +EI + P L+
Sbjct: 216 RDEAVHTTASCYIYNNYLGDH----AKPEAARVYRLFREAVDIEIGFIRSQAPTDSSILS 271
Query: 62 A---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y++F A+R I ++PL+ + ++ K NFFE R T Y
Sbjct: 272 PGALAAIENYVRFSADRLLGLIHMQPLYSAPAPDASFPLSLMSTDKHTNFFECRSTSYA- 330
Query: 119 GAELKW 124
GA +
Sbjct: 331 GAVVND 336
>gi|238788616|ref|ZP_04632408.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
frederiksenii ATCC 33641]
gi|238723211|gb|EEQ14859.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
frederiksenii ATCC 33641]
Length = 383
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E QQ+ + A E +A
Sbjct: 244 RDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 303
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F NP PW++ + + E V+
Sbjct: 304 MIGLNKEILCQYVEYITNIRMQAVGLGIPFNTRTNPIPWINSWLVSDNVQVAPQEVEVSS 363
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 364 YLVGQIDSEVSAD 376
>gi|269139684|ref|YP_003296385.1| ribonucleotide reductase, beta subunit [Edwardsiella tarda EIB202]
gi|267985345|gb|ACY85174.1| ribonucleotide reductase, beta subunit [Edwardsiella tarda EIB202]
gi|304559553|gb|ADM42217.1| Ribonucleotide reductase of class Ia, beta subunit [Edwardsiella
tarda FL6-60]
Length = 376
Score = 76.9 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E + + + +A E +A
Sbjct: 237 RDEALHLTGTQHILNLMRSGQDDPEMAEIAAECEDQCYDLFVQAAQQEKEWAGYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLSLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|149190928|ref|ZP_01869191.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio shilonii
AK1]
gi|148835283|gb|EDL52257.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio shilonii
AK1]
Length = 377
Score = 76.9 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSR----TMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +IN ++ + ++ + + EA E +A
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQDCFDLFKEAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I+N R +GL+ + T NP PW++ + + E ++
Sbjct: 297 MIGLNKDILCQYVEYISNVRMQAVGLDAAYPEATSNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|117920413|ref|YP_869605.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
ANA-3]
gi|117612745|gb|ABK48199.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Shewanella sp. ANA-3]
Length = 391
Score = 76.9 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN ++ ++ ++P + E QQ++ + +A E +A
Sbjct: 252 RDEALHLNSTQHILTIMQGGKDDPEMAEIAAECQQEAYNLFLKAAEQEKEWAKYLFKDGS 311
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N+R + L + NP PWM ++ + E V+
Sbjct: 312 MIGLNEQILCQYVEYITNQRMKSVNLPLPYAELSNPLPWMKNWLESDAVQVAPQEVEVSS 371
Query: 116 Y---QQGAELKWD 125
Y Q + + D
Sbjct: 372 YLVGQIDSAVDSD 384
>gi|269963956|ref|ZP_06178265.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio harveyi
1DA3]
gi|269831299|gb|EEZ85449.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio harveyi
1DA3]
Length = 377
Score = 76.9 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSR----TMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN +IN ++ + ++++ + EA E +A
Sbjct: 237 RDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL + T NP PW++ + + E ++
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLPMAYPEATSNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|329298015|ref|ZP_08255351.1| ribonucleotide-diphosphate reductase subunit beta [Plautia stali
symbiont]
Length = 376
Score = 76.9 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ ++P + E + + + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRTGEDDPEMKEIAAECRDECFDLFKKAAEQEKEWAEYLFSGGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQGA----ELKWD 125
Y G + D
Sbjct: 357 YLVGQIDSEVGEDD 370
>gi|311085920|gb|ADP66002.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
aphidicola str. LL01 (Acyrthosiphon pisum)]
gi|311086491|gb|ADP66572.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
aphidicola str. TLW03 (Acyrthosiphon pisum)]
gi|311087626|gb|ADP67705.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
aphidicola str. JF98 (Acyrthosiphon pisum)]
Length = 359
Score = 76.9 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQI----KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KG 56
RDE+LHL ++N + EN E ++++ + A E +A
Sbjct: 220 RDEALHLTGTQHILNLLSNIKNNENMEDVVLECKEEAINIFISAAQQEKKWASYLFKSGS 279
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R H IG + FK NP PW+++ + + ET ++
Sbjct: 280 MLGLNKDILCQYIEYITNIRMHAIGFKMPFKKQSNPIPWINDWLTSDNIQIAPQETEISS 339
Query: 116 YQQG 119
Y G
Sbjct: 340 YLVG 343
>gi|83722609|ref|YP_443887.1| ribonucleotide reductase subunit 2 [Papiine herpesvirus 2]
gi|75905762|gb|ABA29294.1| UL40 [Papiine herpesvirus 2]
Length = 339
Score = 76.9 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K ++ + EA +EI + P L+
Sbjct: 218 RDEAVHTTASCYIYNNYLAGH----RKPEPERVYRLFREAVEIEIGFIRSQAPADSRILD 273
Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFP-WMSEVIDLKKEKNFFETRVTEYQ 117
A + E Y++F A+R I ++PLF P P + ++ +K NFFE R T Y
Sbjct: 274 AAALAAIENYVRFSADRLLALIEMKPLFGAPA-PAPSFPLNLMSTEKHTNFFERRSTAYA 332
Query: 118 QGAELKW 124
GA +
Sbjct: 333 -GAVVND 338
>gi|157961884|ref|YP_001501918.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
pealeana ATCC 700345]
gi|157846884|gb|ABV87383.1| Ribonucleoside-diphosphate reductase [Shewanella pealeana ATCC
700345]
Length = 376
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN ++ + ++P + KE +Q + + +A E +A
Sbjct: 237 RDEALHLNSTQHILKIMHAGKDDPEMAEIAKECEQTAIDIFIKAAEQEKEWAKYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R + + NP PWM ++ + E V+
Sbjct: 297 MIGLNETILCQYVEYITNERMKAVNFASPYAEQTNPLPWMKNWLESDSVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|261253084|ref|ZP_05945657.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
orientalis CIP 102891]
gi|260936475|gb|EEX92464.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
orientalis CIP 102891]
Length = 377
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +IN ++ +E +Q+ + EA E +A
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKEAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL + T NP PW++ + + E ++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGAAYPEATSNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|238785708|ref|ZP_04629683.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
bercovieri ATCC 43970]
gi|238713393|gb|EEQ05430.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
bercovieri ATCC 43970]
Length = 376
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E Q + + A E +A
Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQSQCYDLFVLAAQQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F NP PW++ + + E V+
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRSNPIPWINSWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEISAD 369
>gi|89074073|ref|ZP_01160574.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
sp. SKA34]
gi|89050211|gb|EAR55722.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
sp. SKA34]
Length = 377
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E +Q + A E +A
Sbjct: 237 RDEALHLTGTQHILNLLRNGHDDPEMVEIATECEQDCFDLFKAAAEQEKEWADYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL P ++ T+NP PW++ + + E ++
Sbjct: 297 MIGLNKQILCQYVEYITNLRMVAVGLRPAYEGATQNPIPWINSWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|126658748|ref|ZP_01729893.1| hypothetical protein CY0110_32340 [Cyanothece sp. CCY0110]
gi|126620010|gb|EAZ90734.1| hypothetical protein CY0110_32340 [Cyanothece sp. CCY0110]
Length = 347
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 9/127 (7%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DE H++ +I + + + + + + H EI + + +G++
Sbjct: 222 DELTHVSLYQKLITEATTKFSY-----SEDEITELFHTTVEREIEWTNHIFDGQILGVSK 276
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENP---FPWMSEVIDLKKEKNFFETRVTEYQQG 119
S E Y +++AN R IG+ ++ ENP W K + FFET VT Y Q
Sbjct: 277 ASTEAYTKYLANLRLKAIGIPAIYPKIENPYAHLDWADFKGIGKSKAAFFETEVTGYAQP 336
Query: 120 AELK-WD 125
+K WD
Sbjct: 337 TAVKGWD 343
>gi|15616797|ref|NP_240009.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
aphidicola str. APS (Acyrthosiphon pisum)]
gi|219681552|ref|YP_002467937.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
aphidicola str. 5A (Acyrthosiphon pisum)]
gi|219682108|ref|YP_002468492.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
aphidicola str. Tuc7 (Acyrthosiphon pisum)]
gi|257471235|ref|ZP_05635234.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
aphidicola str. LSR1 (Acyrthosiphon pisum)]
gi|11134533|sp|P57275|RIR2_BUCAI RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
AltName: Full=Ribonucleotide reductase small subunit
gi|25285834|pir||G84950 ribonucleoside-diphosphate reductase (EC 1.17.4.1) nrdB [imported]
- Buchnera sp. (strain APS)
gi|10038860|dbj|BAB12895.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera
aphidicola str. APS (Acyrthosiphon pisum)]
gi|219621841|gb|ACL29997.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
aphidicola str. Tuc7 (Acyrthosiphon pisum)]
gi|219624395|gb|ACL30550.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
aphidicola str. 5A (Acyrthosiphon pisum)]
gi|311087074|gb|ADP67154.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
aphidicola str. JF99 (Acyrthosiphon pisum)]
Length = 376
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQI----KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KG 56
RDE+LHL ++N + EN E ++++ + A E +A
Sbjct: 237 RDEALHLTGTQHILNLLSNIKNNENMEDVVLECKEEAINIFISAAQQEKKWASYLFKSGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R H IG + FK NP PW+++ + + ET ++
Sbjct: 297 MLGLNKDILCQYIEYITNIRMHAIGFKMPFKKQSNPIPWINDWLTSDNIQIAPQETEISS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|127512873|ref|YP_001094070.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
loihica PV-4]
gi|126638168|gb|ABO23811.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Shewanella loihica PV-4]
Length = 376
Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN ++ ++ ++P + KE +Q + + +A E +A
Sbjct: 237 RDEALHLNSTQHILKLMQGGKDDPEMAEIAKECEQTAIDIFVKAAEQEKEWAKYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R + L + NP PWM ++ + E V+
Sbjct: 297 MIGLNEQILCQYVEYITNERMKSVNLVSPYADQSNPLPWMKNWLESDSVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|319954718|ref|YP_004165985.1| ATP-cone domain protein [Cellulophaga algicola DSM 14237]
gi|319423378|gb|ADV50487.1| ATP-cone domain protein [Cellulophaga algicola DSM 14237]
Length = 424
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF-VGL 60
++E +H +FGID+I IK ENP + ++ + + M +A + E + KG L
Sbjct: 293 KEEQIHGDFGIDIIKIIKKENPDWFDADYHKTIQQMCKDAFIAESSVVDWIFEKGELDFL 352
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQ 117
++++ N IG+E +F+ E W + I K +FF R Y
Sbjct: 353 PKDVVNEFIKNRFNNSLESIGIEKIFEVNEELIAETEWFDDEIIGTKHGDFFVKRSINYS 412
Query: 118 QGAE 121
+ +
Sbjct: 413 KRTQ 416
>gi|261493906|ref|ZP_05990416.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261495801|ref|ZP_05992236.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261308535|gb|EEY09803.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261310439|gb|EEY11632.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 376
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++P + +E +Q++ + A E A+A
Sbjct: 237 RDEALHLTGTQHILNIMTYGNDDPEMAEIARECRQEAYELFLSAAEQEKAWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL FK NP PW++ + + E V+
Sbjct: 297 MIGLNRDILVQYIEYITNIRMQAVGLPLPFKARSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|148978906|ref|ZP_01815226.1| ribonucleotide-diphosphate reductase beta subunit [Vibrionales
bacterium SWAT-3]
gi|145962104|gb|EDK27390.1| ribonucleotide-diphosphate reductase beta subunit [Vibrionales
bacterium SWAT-3]
Length = 377
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +IN ++ +E +Q+ + EA E +A
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFAFMQIAEECKQECFDLFKEAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL + T NP PW++ + + E ++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGTAYPEATSNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|84386981|ref|ZP_00990005.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
splendidus 12B01]
gi|86148466|ref|ZP_01066756.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
MED222]
gi|218709927|ref|YP_002417548.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
splendidus LGP32]
gi|84378271|gb|EAP95130.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
splendidus 12B01]
gi|85833763|gb|EAQ51931.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
MED222]
gi|218322946|emb|CAV19123.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
splendidus LGP32]
Length = 377
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +IN ++ +E +Q+ + EA E +A
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFEFMQIAEECKQECFDLFKEAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL + T NP PW++ + + E ++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGTAYPEATSNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|59711808|ref|YP_204584.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio fischeri
ES114]
gi|197336251|ref|YP_002156001.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio fischeri
MJ11]
gi|59479909|gb|AAW85696.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
protein [Vibrio fischeri ES114]
gi|197317741|gb|ACH67188.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio fischeri
MJ11]
Length = 377
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDESLHL ++N ++ ++P E +Q+ + A E +A+
Sbjct: 237 RDESLHLTSTQHMLNLLRTGQDDPEFVEIAAECEQECFDLFKAAAEQEKQWANYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL ++ T+NP PW++ + + ET ++
Sbjct: 297 MIGLNKDILCQYVEYITNLRMKAVGLNSAYEGATQNPIPWINSWLSSDNVQVAPQETEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|323497713|ref|ZP_08102728.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
sinaloensis DSM 21326]
gi|323317189|gb|EGA70185.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
sinaloensis DSM 21326]
Length = 377
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +IN ++ +E +Q+ + EA E +A
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKEAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL + T NP PW++ + + E ++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGAAYPEATSNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|193062401|ref|ZP_03043496.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli E22]
gi|192932067|gb|EDV84666.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli E22]
Length = 393
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E + + + +A E +A
Sbjct: 254 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKLECYDLFVQAAQQEKDWADYLFRDGS 313
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 314 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 373
Query: 116 YQQG 119
Y G
Sbjct: 374 YLVG 377
>gi|34419511|ref|NP_899524.1| aerobic ribonucleoside diphosphate reductase small subunit [Vibrio
phage KVP40]
gi|34333192|gb|AAQ64347.1| aerobic ribonucleoside diphosphate reductase small subunit [Vibrio
phage KVP40]
Length = 374
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE LHL +I+ + ++P + + Q ++ + + E +AH
Sbjct: 235 RDEQLHLKGTQALISIWQNYKDDPEMAEISLRLQPEAEKIFMQVVDQEKEWAHSLFSQGT 294
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN-FFETRVTE 115
GLNA +Y++++A+ R +GL + ++P PW+ + ++ + E ++
Sbjct: 295 VPGLNAQILCEYVEYLADSRMRSVGLNSPYPRRKHPLPWIRKWLNSDSVQVAAQEAELSS 354
Query: 116 YQQG 119
Y G
Sbjct: 355 YLVG 358
>gi|13242410|ref|NP_077433.1| ribonucleotide reductase subunit 2 [Cercopithecine herpesvirus 9]
gi|11036562|gb|AAG27191.1|AF275348_11 ribonucleotide reductase, small subunit [Cercopithecine herpesvirus
9]
Length = 311
Score = 76.1 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 5/123 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + + N K + + EA +E + PK +N
Sbjct: 193 RDEAVHTSASCCIYNNYIS----YKEKPAIPRIHQLFMEAVNIECNFISAYAPKNQRIIN 248
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY+++ A+R I + LF + + +K NFFE T Y GA
Sbjct: 249 IDAILQYVRYNADRLLSAINIPVLFNAPAPKADFPLAFMTAEKHTNFFERHSTAY-TGAV 307
Query: 122 LKW 124
+
Sbjct: 308 IND 310
>gi|85059563|ref|YP_455265.1| ribonucleotide-diphosphate reductase subunit beta [Sodalis
glossinidius str. 'morsitans']
gi|84780083|dbj|BAE74860.1| ribonucleoside-diphosphate reductase 1 beta subunit [Sodalis
glossinidius str. 'morsitans']
Length = 376
Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E QQ+S + A E +A
Sbjct: 237 RDEALHLTSTQHMLNLMRSGEDDPEMAEIARECQQESYDLFLLAAQQEKEWASYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQSVGLDLPFATRSNPIPWINSWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|152979144|ref|YP_001344773.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
succinogenes 130Z]
gi|150840867|gb|ABR74838.1| Ribonucleoside-diphosphate reductase [Actinobacillus succinogenes
130Z]
Length = 376
Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + +E +Q++ + A E A+A
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFEARSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|260768282|ref|ZP_05877216.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
furnissii CIP 102972]
gi|260616312|gb|EEX41497.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
furnissii CIP 102972]
gi|315179989|gb|ADT86903.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio furnissii
NCTC 11218]
Length = 377
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +IN ++ +E +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMINLLRNGMDDFEFLQIAEECKQECFDLFKQAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL+ + T NP PW++ + + E ++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDAAYPSATTNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|9625893|ref|NP_040141.1| ribonucleotide reductase subunit 2 [Human herpesvirus 3]
gi|132630|sp|P09247|RIR2_VZVD RecName: Full=Ribonucleoside-diphosphate reductase small chain;
Short=R2; AltName: Full=Ribonucleotide reductase small
subunit
gi|259645448|sp|Q4JQV7|RIR2_VZVO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
Short=R2; AltName: Full=Ribonucleotide reductase small
subunit
gi|60007|emb|CAA27901.1| ribonucleotide reductase (small subunit) [Human herpesvirus 3
strain Dumas]
gi|46981429|gb|AAT07700.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
gi|46981500|gb|AAT07776.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
gi|66865986|gb|AAY57634.1| ORF18 [Human herpesvirus 3]
gi|66866058|gb|AAY57705.1| ORF18 [Human herpesvirus 3]
gi|83721826|emb|CAI44861.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
gi|90992817|gb|ABE03036.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
gi|91980319|gb|ABE67126.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
gi|94481816|gb|ABF21518.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
gi|94481890|gb|ABF21591.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
gi|94481964|gb|ABF21664.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
gi|94482038|gb|ABF21737.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
gi|94482112|gb|ABF21810.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
gi|94482186|gb|ABF21883.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
gi|94482260|gb|ABF21956.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
gi|94482334|gb|ABF22029.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
gi|94482408|gb|ABF22102.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
gi|94482482|gb|ABF22175.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
gi|94482556|gb|ABF22248.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
gi|111184743|gb|ABH08451.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
gi|157965778|gb|ABW06924.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
Length = 306
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + + N E P + + + EA +E A+ PK + +N
Sbjct: 191 RDEAIHTSASCCIYNNYVPEKPAIT------RIHQLFSEAVEIECAFLKSHAPKTRL-VN 243
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ QY++F A+R I + LF + + K NFFE T Y G
Sbjct: 244 VDAITQYVKFSADRLLSAINVPKLFNTPPPDSDFPLAFMIADKNTNFFERHSTSYA-GTV 302
Query: 122 LKW 124
+
Sbjct: 303 IND 305
>gi|301156451|emb|CBW15922.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
[Haemophilus parainfluenzae T3T1]
Length = 376
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + +E +Q++ + A E +A
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKEWADYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F NP PW++ + + E V+
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFGARSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|260778827|ref|ZP_05887719.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
coralliilyticus ATCC BAA-450]
gi|260604991|gb|EEX31286.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
coralliilyticus ATCC BAA-450]
Length = 377
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +IN ++ +E +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL+ + T NP PW++ + + E ++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDAAYPEATSNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|330433426|gb|AEC18485.1| ribonucleotide-diphosphate reductase subunit beta [Gallibacterium
anatis UMN179]
Length = 376
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + +E QQ++ + A E +A+
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECQQEAYDLFVAAAEQEKEWANYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLPLPFTTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|312130784|ref|YP_003998124.1| ribonucleotide reductase [Leadbetterella byssophila DSM 17132]
gi|311907330|gb|ADQ17771.1| ribonucleotide reductase [Leadbetterella byssophila DSM 17132]
Length = 324
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 4/120 (3%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGLN 61
DE +H N GI ++N I+ E P + E + + E+ +E +
Sbjct: 194 DEQIHANGGIYIVNTIRDEFPDFFDPETITQIEDTVRESIEVEERILDWIFSEGEIEIIK 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+M+F + +IG PLF + P W E + +FF R +Y +
Sbjct: 254 KKDLLNFMKFRIDDSMKKIGFSPLFHVSSADYQPIAWFEEEVFANSLDDFFAKRPVDYTK 313
>gi|254361270|ref|ZP_04977413.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
PHL213]
gi|153092766|gb|EDN73809.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
PHL213]
Length = 376
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + +E +Q++ + A E A+A
Sbjct: 237 RDEALHLTGTQHILNIMAYGNDDPEMAEIARECRQEAYELFLSAAEQEKAWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL FK NP PW++ + + E V+
Sbjct: 297 MIGLNRDILVQYIEYITNIRMQAVGLPLPFKARSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|71892252|ref|YP_277986.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
Blochmannia pennsylvanicus str. BPEN]
gi|71796358|gb|AAZ41109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus
Blochmannia pennsylvanicus str. BPEN]
Length = 376
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN ++N ++ ++P + E QQ+S + A E +A+
Sbjct: 237 RDEALHLNATQHILNLMRSGSDDPEMADISTECQQESYALFLMAAEQEKNWANYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R IGL F N PW++ + + E +
Sbjct: 297 MIGLNKDILCQYIEYITNIRMQAIGLRTPFNIKSNVIPWINSWLSSDNVQVAPQEVEASS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|323494790|ref|ZP_08099889.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
brasiliensis LMG 20546]
gi|323310983|gb|EGA64148.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
brasiliensis LMG 20546]
Length = 377
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +IN ++ +E +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL+ + T NP PW++ + + E ++
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDAAYPEATSNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|56694763|ref|YP_164483.1| ribonucleotide reductase subunit 2 [Cercopithecine herpesvirus 2]
gi|52843315|gb|AAU88106.1| small subunit of ribonucleotide reductase [Cercopithecine
herpesvirus 2]
Length = 325
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K ++ + EA +EI + P L+
Sbjct: 204 RDEAVHTTASCYIYNNYLAGH----HKPEPERVYRLFREAVEIEIGFIRSQAPADSRILD 259
Query: 62 APS---CEQYMQFIANRRCHQIGLEPLFKYTENPFP-WMSEVIDLKKEKNFFETRVTEYQ 117
A + E Y++F A+R I ++PLF P P + ++ +K NFFE R T Y
Sbjct: 260 AAALAAIENYVRFSADRLLALIRMKPLFGAPA-PAPSFPLSLMSTEKHTNFFECRSTAYA 318
Query: 118 QGAELKW 124
GA +
Sbjct: 319 -GAVVND 324
>gi|21959884|gb|AAM86526.1|AE013899_3 ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Yersinia
pestis KIM 10]
gi|45435621|gb|AAS61179.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
biovar Microtus str. 91001]
Length = 391
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E QQ+ + A E +A
Sbjct: 252 RDEALHLTGTQHILNLMRLGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 311
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F NP PW++ + + E V+
Sbjct: 312 MIGLNKEILCQYVEYITNIRMQAVGLGIPFSTRTNPIPWINSWLVSDNVQVAPQEVEVSS 371
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 372 YLVGQIDSEVSAD 384
>gi|317492553|ref|ZP_07950980.1| ribonucleotide reductase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919303|gb|EFV40635.1| ribonucleotide reductase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 376
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWTK--EFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E +Q+ + A E +A
Sbjct: 237 RDEALHLTGTQHILNLMRSGQDDPEMAEVAVECEQQCYDLFVLAAEQEKEWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLKLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVNAD 369
>gi|325578589|ref|ZP_08148689.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
parainfluenzae ATCC 33392]
gi|325159825|gb|EGC71955.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
parainfluenzae ATCC 33392]
Length = 376
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + +E +Q++ + A E +A
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKEWADYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F NP PW++ + + E V+
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFGARSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|257373022|ref|YP_003175796.1| ribonucleotide reductase [Halomicrobium mukohataei DSM 12286]
gi|257167746|gb|ACV49438.1| ribonucleotide reductase [Halomicrobium mukohataei DSM 12286]
Length = 336
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGL 60
++E +H FG++++ I+ ENP L+ ++F+++ + +A E+ L
Sbjct: 205 KEEQIHGLFGVELVETIREENPDLFDEDFEEEVQAACQQAFEAEMKILDWIFGEGELEFL 264
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
+ +++ N+ +G+EP+F+ E+ W E I + K+ +FF R T Y
Sbjct: 265 PRAHVDAFLRDRFNQSLENVGVEPIFEPDEDLLEETRWFDEDIMMTKDNDFFSKRSTTYN 324
Query: 118 QGAE 121
+ A+
Sbjct: 325 KHAQ 328
>gi|327409820|ref|YP_004347240.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus]
gi|326784994|gb|AEA07128.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus]
Length = 319
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+LH F + N + E ++ + Q++ +L A + ++ V ++
Sbjct: 191 RDEALHKKFAEVLYNFLVDEL-KVFERVSQERCHEILTSAIEAVTDFIKYSLRLDNVNID 249
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A YM+ + + E ++ EN +M +I L+ + NFFE +T+Y +G +
Sbjct: 250 ADRMLGYMKRAVDDLATGLKYEKVYN-AENTLDYML-LIGLENKGNFFEGVITDYSKGMD 307
Query: 122 LKW 124
+
Sbjct: 308 MGD 310
>gi|237808189|ref|YP_002892629.1| ribonucleotide-diphosphate reductase subunit beta [Tolumonas
auensis DSM 9187]
gi|237500450|gb|ACQ93043.1| ribonucleotide reductase [Tolumonas auensis DSM 9187]
Length = 377
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTMLHEATLLEIAYAHETMPKGF 57
RDE+LHL ++N ++ N +E + + +A E +A G
Sbjct: 237 RDEALHLTGTQHMLNILREGNDDPEMAEIARELHDECFALFKKAAEQEKEWASYLFKDGS 296
Query: 58 V-GLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+ GLN QY++FI N R +GL F +NP PW++ ++ + E ++
Sbjct: 297 MLGLNKDILCQYVEFITNVRMQGVGLPLAFDADRQNPLPWINTWLNSDNVQVAPQEVEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|312885176|ref|ZP_07744856.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309367189|gb|EFP94761.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 377
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +IN ++ +E +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL+ + T NP PW++ + + E ++
Sbjct: 297 MIGLNKDILSQYVEYITNIRMQAVGLDAAYPEATSNPIPWINAWLSSDNVQVAPQEAEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|51595597|ref|YP_069788.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
pseudotuberculosis IP 32953]
gi|108806924|ref|YP_650840.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
Antiqua]
gi|108812924|ref|YP_648691.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
Nepal516]
gi|145599749|ref|YP_001163825.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
Pestoides F]
gi|149366796|ref|ZP_01888830.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
CA88-4125]
gi|153950490|ref|YP_001401734.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
pseudotuberculosis IP 31758]
gi|161484771|ref|NP_670275.2| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
KIM 10]
gi|161511422|ref|NP_992302.2| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
biovar Microtus str. 91001]
gi|162418296|ref|YP_001605847.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
Angola]
gi|165924721|ref|ZP_02220553.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165938305|ref|ZP_02226863.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Orientalis str. IP275]
gi|166009974|ref|ZP_02230872.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166211802|ref|ZP_02237837.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167400353|ref|ZP_02305866.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167419574|ref|ZP_02311327.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167424117|ref|ZP_02315870.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|167470792|ref|ZP_02335496.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
FV-1]
gi|170025073|ref|YP_001721578.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
pseudotuberculosis YPIII]
gi|186894660|ref|YP_001871772.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
pseudotuberculosis PB1/+]
gi|218928372|ref|YP_002346247.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
CO92]
gi|229841157|ref|ZP_04461316.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229843262|ref|ZP_04463408.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
biovar Orientalis str. India 195]
gi|229894122|ref|ZP_04509308.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
Pestoides A]
gi|229903354|ref|ZP_04518467.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
Nepal516]
gi|270487164|ref|ZP_06204238.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
KIM D27]
gi|294503227|ref|YP_003567289.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
Z176003]
gi|51588879|emb|CAH20493.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia
pseudotuberculosis IP 32953]
gi|108776572|gb|ABG19091.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Yersinia pestis Nepal516]
gi|108778837|gb|ABG12895.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Yersinia pestis Antiqua]
gi|115346983|emb|CAL19874.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
CO92]
gi|145211445|gb|ABP40852.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Yersinia pestis Pestoides F]
gi|149291170|gb|EDM41245.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
CA88-4125]
gi|152961985|gb|ABS49446.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia
pseudotuberculosis IP 31758]
gi|162351111|gb|ABX85059.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
Angola]
gi|165913683|gb|EDR32302.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Orientalis str. IP275]
gi|165923781|gb|EDR40913.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165991370|gb|EDR43671.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166207573|gb|EDR52053.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Antiqua str. B42003004]
gi|166962315|gb|EDR58336.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167050302|gb|EDR61710.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167056966|gb|EDR66729.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|169751607|gb|ACA69125.1| Ribonucleoside-diphosphate reductase [Yersinia pseudotuberculosis
YPIII]
gi|186697686|gb|ACC88315.1| ribonucleotide reductase [Yersinia pseudotuberculosis PB1/+]
gi|229679124|gb|EEO75227.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
Nepal516]
gi|229689609|gb|EEO81670.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
biovar Orientalis str. India 195]
gi|229697523|gb|EEO87570.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229704007|gb|EEO91020.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
Pestoides A]
gi|262361266|gb|ACY57987.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
D106004]
gi|262365197|gb|ACY61754.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
D182038]
gi|270335668|gb|EFA46445.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
KIM D27]
gi|294353686|gb|ADE64027.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
Z176003]
gi|320015945|gb|ADV99516.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
biovar Medievalis str. Harbin 35]
Length = 376
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E QQ+ + A E +A
Sbjct: 237 RDEALHLTGTQHILNLMRLGEDDPEMAEIAEECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F NP PW++ + + E V+
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGIPFSTRTNPIPWINSWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVSAD 369
>gi|294637129|ref|ZP_06715438.1| ribonucleoside-diphosphate reductase, beta subunit [Edwardsiella
tarda ATCC 23685]
gi|291089663|gb|EFE22224.1| ribonucleoside-diphosphate reductase, beta subunit [Edwardsiella
tarda ATCC 23685]
Length = 376
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E + + + +A E +A
Sbjct: 237 RDEALHLTGTQHILNLMRSGQDDPEMAEIAAECETQCYDLFVQAAQQEKDWASYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNRDILCQYVEYITNIRMQAVGLSLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|9629310|ref|NP_044510.1| ribonucleotide reductase subunit 2 [Human herpesvirus 2]
gi|61231410|sp|P69520|RIR2_HHV23 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase 38 kDa subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|61231418|sp|P69521|RIR2_HHV2H RecName: Full=Ribonucleoside-diphosphate reductase small chain;
Short=R2; AltName: Full=Ribonucleotide reductase 38 kDa
subunit; AltName: Full=Ribonucleotide reductase small
subunit
gi|330200|gb|AAA45807.1| 38K protein [Human herpesvirus 2]
gi|1869863|emb|CAB06726.1| ribonucleotide reductase small subunit [Human herpesvirus 2]
gi|224613173|dbj|BAH24264.1| ribonucleotide reductase small subunit [Human herpesvirus 2]
gi|224613175|dbj|BAH24265.1| ribonucleotide reductase small subunit [Human herpesvirus 2]
Length = 337
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K + + EA +EI + P L+
Sbjct: 216 RDEAVHTTASCYIYNNYLGGH----AKPEAARVYRLFREAVDIEIGFIRSQAPTDSSILS 271
Query: 62 A---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y++F A+R I ++PL+ + ++ K NFFE R T Y
Sbjct: 272 PGALAAIENYVRFSADRLLGLIHMQPLYSAPAPDASFPLSLMSTDKHTNFFECRSTSYA- 330
Query: 119 GAELKW 124
GA +
Sbjct: 331 GAVVND 336
>gi|329119976|ref|ZP_08248648.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
bacilliformis ATCC BAA-1200]
gi|327463889|gb|EGF10203.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
bacilliformis ATCC BAA-1200]
Length = 384
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 7/122 (5%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWTK--EFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E Q + + +A E +A
Sbjct: 244 RDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFKDGS 303
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL+P F + NP PW++ + + E ++
Sbjct: 304 MIGLNKDILCQYVEYITNHRMIAVGLDPAFPASNQNPIPWINAWLSSDNVQVAPQEVEIS 363
Query: 115 EY 116
Y
Sbjct: 364 SY 365
>gi|320538993|ref|ZP_08038668.1| putative ribonucleoside diphosphate reductase 1, beta subunit,
ferritin-like protein [Serratia symbiotica str. Tucson]
gi|320030926|gb|EFW12930.1| putative ribonucleoside diphosphate reductase 1, beta subunit,
ferritin-like protein [Serratia symbiotica str. Tucson]
Length = 376
Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWTK--EFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E QQ+ + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I+N R +GLE FK NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYISNIRMQAVGLELPFKTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|294505968|ref|YP_003570026.1| Ribonucleoside-diphosphate reductase beta subunit [Salinibacter
ruber M8]
gi|294342296|emb|CBH23074.1| Ribonucleoside-diphosphate reductase beta subunit [Salinibacter
ruber M8]
Length = 324
Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGL 60
++E +H FG++++N I+ E+P + F+Q+ R EA E L
Sbjct: 193 KEEQIHGLFGVELMNIIREEHPEWFGPAFEQEVRAACEEAYDAEQKVLDWIFADGELDFL 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQ 117
P + +++ N + ++P+F+ W E I L K +FF R T Y
Sbjct: 253 PRPVVDAFLRDKFNESLKNVDVDPIFEVDPEHLGETRWFYEEILLTKGNDFFSKRSTSYS 312
Query: 118 Q 118
+
Sbjct: 313 K 313
>gi|222478371|gb|ACM62263.1| ribonucleotide reductase subunit 2 [Human herpesvirus 1]
Length = 340
Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K + + +A +EI + P L+
Sbjct: 219 RDEAVHTTASCYIYNNYLGGH----AKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 274
Query: 62 APSC---EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y++F A+R I ++PLF + ++ K NFFE R T Y
Sbjct: 275 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 333
Query: 119 GAELKW 124
GA +
Sbjct: 334 GAVVND 339
>gi|322515075|ref|ZP_08068083.1| ribonucleoside-diphosphate reductase beta subunit [Actinobacillus
ureae ATCC 25976]
gi|322118955|gb|EFX91132.1| ribonucleoside-diphosphate reductase beta subunit [Actinobacillus
ureae ATCC 25976]
Length = 326
Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
++E +H FGI + ++ E+ L+T EF ++ +T+ +A E +
Sbjct: 195 KEEEIHGKFGIALYEILRDEHSELFTPEFFEELKTLSTQAFEAECGILDWIFEEGDLSFI 254
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
+ + E Y++ N +GLEP + W I KE +FF R T+Y
Sbjct: 255 SREAVENYIRSRYNNSLMTLGLEPPYDVNPELLKETEWFDIEILSTKETDFFNKRSTDYS 314
Query: 118 Q 118
+
Sbjct: 315 K 315
>gi|91793308|ref|YP_562959.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
denitrificans OS217]
gi|91715310|gb|ABE55236.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Shewanella denitrificans OS217]
Length = 376
Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHLN ++ ++ ++P + E QQ++ + ++A E +A
Sbjct: 237 RDEALHLNSTQHILALMQGGKDDPEMAEIAIECQQQAYDLFYKAAEQEKEWAKYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N+R + L + NP PWM ++ + E V+
Sbjct: 297 MIGLNEQILCQYVEYITNQRMKSVHLPQPYAEISNPLPWMKNWLESDAVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q + + D
Sbjct: 357 YLVGQIDSSVNSD 369
>gi|290766061|gb|ADD60039.1| ribonucleotide reductase subunit 2 [Human herpesvirus 1]
Length = 340
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K + + +A +EI + P L+
Sbjct: 219 RDEAVHTTASCYIYNNYLGGH----AKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 274
Query: 62 APSC---EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y++F A+R I ++PLF + ++ K NFFE R T Y
Sbjct: 275 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 333
Query: 119 GAELKW 124
GA +
Sbjct: 334 GAVVND 339
>gi|53728876|ref|ZP_00348266.1| COG0208: Ribonucleotide reductase, beta subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207635|ref|YP_001052860.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
pleuropneumoniae L20]
gi|165975603|ref|YP_001651196.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|190149418|ref|YP_001967943.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303249851|ref|ZP_07336055.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|303251971|ref|ZP_07338142.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307247133|ref|ZP_07529185.1| Ribonucleoside-diphosphate reductase, beta subunit 1
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
gi|307249355|ref|ZP_07531349.1| Ribonucleoside-diphosphate reductase, beta subunit 1
[Actinobacillus pleuropneumoniae serovar 4 str. M62]
gi|307251676|ref|ZP_07533581.1| Ribonucleoside-diphosphate reductase, beta subunit 1
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307253912|ref|ZP_07535764.1| Ribonucleoside-diphosphate reductase, beta subunit 1
[Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307256172|ref|ZP_07537959.1| Ribonucleoside-diphosphate reductase, beta subunit 1
[Actinobacillus pleuropneumoniae serovar 10 str. D13039]
gi|307258366|ref|ZP_07540107.1| Ribonucleoside-diphosphate reductase, beta subunit 1
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
gi|307260605|ref|ZP_07542297.1| Ribonucleoside-diphosphate reductase, beta subunit 1
[Actinobacillus pleuropneumoniae serovar 12 str. 1096]
gi|307262736|ref|ZP_07544363.1| Ribonucleoside-diphosphate reductase, beta subunit 1
[Actinobacillus pleuropneumoniae serovar 13 str. N273]
gi|126096427|gb|ABN73255.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165875704|gb|ABY68752.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|189914549|gb|ACE60801.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302649401|gb|EFL79586.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|302651418|gb|EFL81570.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306856382|gb|EFM88533.1| Ribonucleoside-diphosphate reductase, beta subunit 1
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
gi|306858649|gb|EFM90711.1| Ribonucleoside-diphosphate reductase, beta subunit 1
[Actinobacillus pleuropneumoniae serovar 4 str. M62]
gi|306860873|gb|EFM92881.1| Ribonucleoside-diphosphate reductase, beta subunit 1
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306863116|gb|EFM95058.1| Ribonucleoside-diphosphate reductase, beta subunit 1
[Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306865353|gb|EFM97249.1| Ribonucleoside-diphosphate reductase, beta subunit 1
[Actinobacillus pleuropneumoniae serovar 10 str. D13039]
gi|306867550|gb|EFM99397.1| Ribonucleoside-diphosphate reductase, beta subunit 1
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
gi|306869682|gb|EFN01467.1| Ribonucleoside-diphosphate reductase, beta subunit 1
[Actinobacillus pleuropneumoniae serovar 12 str. 1096]
gi|306871881|gb|EFN03598.1| Ribonucleoside-diphosphate reductase, beta subunit 1
[Actinobacillus pleuropneumoniae serovar 13 str. N273]
Length = 325
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
++E +H FGI + ++ E+ L+T EF + +T+ +A E +
Sbjct: 194 KEEEIHGKFGIALYEILREEHSELFTPEFFEDLKTLSSQAFEAECGILDWIFEEGDLSFI 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
+ E Y++ N +GLEP + W I KE +FF R T+Y
Sbjct: 254 SREEVENYIRSRYNNSLMTLGLEPPYDVNPELLKETEWFDIEILSTKETDFFNKRSTDYS 313
Query: 118 Q 118
+
Sbjct: 314 K 314
>gi|113461104|ref|YP_719172.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
somnus 129PT]
gi|170717681|ref|YP_001784756.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
somnus 2336]
gi|112823147|gb|ABI25236.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Haemophilus somnus 129PT]
gi|168825810|gb|ACA31181.1| Ribonucleoside-diphosphate reductase [Haemophilus somnus 2336]
Length = 376
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + +E +Q++ + A E +A
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYELFVAAAEQEKEWADYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|9629421|ref|NP_044642.1| ribonucleotide reductase subunit 2 [Human herpesvirus 1]
gi|132622|sp|P10224|RIR2_HHV11 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
Short=R2; AltName: Full=Ribonucleotide reductase 38 kDa
subunit; AltName: Full=Ribonucleotide reductase small
subunit; Flags: Precursor
gi|59540|emb|CAA32303.1| ribonucleotide reductase small subunit [Human herpesvirus 1]
Length = 340
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K + + +A +EI + P L+
Sbjct: 219 RDEAVHTTASCYIYNNYLGGH----AKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 274
Query: 62 APSC---EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y++F A+R I ++PLF + ++ K NFFE R T Y
Sbjct: 275 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 333
Query: 119 GAELKW 124
GA +
Sbjct: 334 GAVVND 339
>gi|148825799|ref|YP_001290552.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
influenzae PittEE]
gi|148715959|gb|ABQ98169.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
influenzae PittEE]
Length = 376
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + +E +Q++ + A E A+A
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|270262779|ref|ZP_06191050.1| ribonucleoside-diphosphate reductase 1 subunit beta [Serratia
odorifera 4Rx13]
gi|270043463|gb|EFA16556.1| ribonucleoside-diphosphate reductase 1 subunit beta [Serratia
odorifera 4Rx13]
Length = 359
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWTK--EFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E QQ+ + A E +A
Sbjct: 220 RDEALHLTGTQHILNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQEKEWAEYLFRDGS 279
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 280 MIGLNKDILCQYVEYITNIRMQAVGLGLPFETRSNPIPWINAWLVSDNVQVAPQEVEVSS 339
Query: 116 YQQG 119
Y G
Sbjct: 340 YLVG 343
>gi|307244959|ref|ZP_07527056.1| Ribonucleoside-diphosphate reductase, beta subunit 1
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|306854124|gb|EFM86332.1| Ribonucleoside-diphosphate reductase, beta subunit 1
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
Length = 325
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
++E +H FGI + ++ E+ L+T EF + +T+ +A E +
Sbjct: 194 KEEEIHGKFGIVLYEILREEHSELFTPEFFEDLKTLSSQAFEAECGILDWIFEEGDLSFI 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
+ E Y++ N +GLEP + W I KE +FF R T+Y
Sbjct: 254 SREEVENYIRSRYNNSLMTLGLEPPYDVNPELLKETEWFDIEILSTKETDFFNKRSTDYS 313
Query: 118 Q 118
+
Sbjct: 314 K 314
>gi|114318828|gb|ABI63502.1| UL40 [Human herpesvirus 1]
gi|290766139|gb|ADD60116.1| ribonucleotide reductase subunit 2 [Human herpesvirus 1]
Length = 340
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K + + +A +EI + P L+
Sbjct: 219 RDEAVHTTASCYIYNNYLGGH----AKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 274
Query: 62 APSC---EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y++F A+R I ++PLF + ++ K NFFE R T Y
Sbjct: 275 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 333
Query: 119 GAELKW 124
GA +
Sbjct: 334 GAVVND 339
>gi|1172944|sp|P06474|RIR2_HHV1K RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase 38 kDa subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|807641|gb|AAA66436.1| unknown protein [Human herpesvirus 1]
Length = 340
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K + + +A +EI + P L+
Sbjct: 219 RDEAVHTTASCYIYNNYLGGH----AKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 274
Query: 62 APSC---EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y++F A+R I ++PLF + ++ K NFFE R T Y
Sbjct: 275 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 333
Query: 119 GAELKW 124
GA +
Sbjct: 334 GAVVND 339
>gi|145633337|ref|ZP_01789068.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
influenzae 3655]
gi|144986183|gb|EDJ92773.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
influenzae 3655]
Length = 376
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + +E +Q++ + A E A+A
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|322832009|ref|YP_004212036.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
gi|321167210|gb|ADW72909.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
Length = 376
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWTK--EFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +N ++ ++P + E QQ+ + A E +A
Sbjct: 237 RDEALHLTGTQHALNLLRSGQDDPEMAEIALECQQECHDLFVLAAQQEKDWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ FK NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDAPFKTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|16273547|ref|NP_439802.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
influenzae Rd KW20]
gi|68250262|ref|YP_249374.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
influenzae 86-028NP]
gi|145629252|ref|ZP_01785051.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
influenzae 22.1-21]
gi|145631490|ref|ZP_01787259.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
influenzae R3021]
gi|145639184|ref|ZP_01794791.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
influenzae PittII]
gi|145641092|ref|ZP_01796673.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
influenzae R3021]
gi|260581255|ref|ZP_05849073.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
influenzae RdAW]
gi|260582634|ref|ZP_05850423.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
influenzae NT127]
gi|319776092|ref|YP_004138580.1| ribonucleoside-diphosphate reductase subunit beta [Haemophilus
influenzae F3047]
gi|319896901|ref|YP_004135096.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
influenzae F3031]
gi|329123256|ref|ZP_08251824.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
aegyptius ATCC 11116]
gi|1172943|sp|P43755|RIR2_HAEIN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
AltName: Full=Ribonucleotide reductase small subunit
gi|1574510|gb|AAC23306.1| ribonucleoside diphosphate reductase, beta chain (nrdB)
[Haemophilus influenzae Rd KW20]
gi|68058461|gb|AAX88714.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
influenzae 86-028NP]
gi|144978755|gb|EDJ88478.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
influenzae 22.1-21]
gi|144982920|gb|EDJ90433.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
influenzae R3021]
gi|145271746|gb|EDK11656.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
influenzae PittII]
gi|145274253|gb|EDK14118.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
influenzae 22.4-21]
gi|260092082|gb|EEW76027.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
influenzae RdAW]
gi|260094306|gb|EEW78205.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
influenzae NT127]
gi|301170418|emb|CBW30024.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
[Haemophilus influenzae 10810]
gi|309750762|gb|ADO80746.1| Ribonucleoside diphosphate reductase 1, beta subunit [Haemophilus
influenzae R2866]
gi|309972945|gb|ADO96146.1| Ribonucleoside diphosphate reductase 1, beta subunit [Haemophilus
influenzae R2846]
gi|317432405|emb|CBY80760.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
influenzae F3031]
gi|317450683|emb|CBY86903.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
influenzae F3047]
gi|327471465|gb|EGF16913.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
aegyptius ATCC 11116]
Length = 376
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + +E +Q++ + A E A+A
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|116326775|ref|YP_803312.1| hypothetical protein TNAV2c_gp089 [Trichoplusia ni ascovirus 2c]
gi|102231783|gb|ABF70606.1| hypothetical protein [Trichoplusia ni ascovirus 2c]
Length = 269
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N + + P + +L EA ++E + + +P +G+N
Sbjct: 172 RDEGLHTDFACLMYNYVVQKPP-------NSRVIEILKEAVVIEKDFLTDALPVRLLGMN 224
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPF 93
QY++F+A+R +++ E + +NP
Sbjct: 225 CDLMSQYIEFVADRLLYELIGEKYYN-AKNPI 255
>gi|209695249|ref|YP_002263178.1| ribonucleotide-diphosphate reductase subunit beta [Aliivibrio
salmonicida LFI1238]
gi|208009201|emb|CAQ79455.1| ribonucleoside-diphosphate reductase 1 beta chain [Aliivibrio
salmonicida LFI1238]
Length = 377
Score = 75.0 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P E +Q + A E +A+
Sbjct: 237 RDEALHLTSTQHMVNLLRTGQDDPEFVEIAAECEQDCFDLFKAAAEQEKEWANYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL + T+NP PW++ + + ET ++
Sbjct: 297 MIGLNKDILCQYVEYITNLRMKAVGLSGAYDGATQNPIPWINSWLSSDNVQVAPQETEIS 356
Query: 115 EYQQG 119
Y G
Sbjct: 357 SYLVG 361
>gi|255026984|ref|ZP_05298970.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
monocytogenes FSL J2-003]
Length = 336
Score = 75.0 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H F +VI I ENP L T+E + + A LE ++ E + G++
Sbjct: 221 RDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVLQG-IEGID 279
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEKNF 108
Y+++ AN+ +G+ L+ +++N W+ D + + +F
Sbjct: 280 VEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDF 329
>gi|293392273|ref|ZP_06636607.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290952807|gb|EFE02926.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 376
Score = 75.0 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + +E +Q++ + A E +A
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAKIAEECKQEAYDLFLAAAEQEKDWADYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|22550280|gb|AAN01603.1| ribonucleotide reductase small subunit [Human herpesvirus 2 strain
G]
Length = 342
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 50/132 (37%), Gaps = 18/132 (13%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K + + EA +EI + P L+
Sbjct: 219 RDEAVHTTASCYIYNNYLGGH----AKPEAARVYRLFREAVDIEIGFIRSQAPTDSSILS 274
Query: 62 A---PSCEQYMQFIANRRCHQIGLEPLF------KYTENPFPWMSEVIDLKKEKNFFETR 112
+ E Y++F A+R I ++PL+ P ++ K NFFE R
Sbjct: 275 PGALAAIENYVRFSADRLLGLIHMQPLYSASAPAPDASFPLS----LMSTDKHTNFFECR 330
Query: 113 VTEYQQGAELKW 124
T Y GA +
Sbjct: 331 STSYA-GAVVND 341
>gi|307171465|gb|EFN63309.1| Ribonucleoside-diphosphate reductase subunit M2 [Camponotus
floridanus]
Length = 343
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + H+ K ++ ++++ +A +E + + +P +G+N
Sbjct: 243 RDEGLHCDFACLMFK-------HIVQKPSFERVKSIIMDAVEIEQEFLTQALPVQLIGMN 295
Query: 62 APSCEQYMQFIANRRCHQIGLEPL 85
Y++F+A+R +G E +
Sbjct: 296 CTLMCSYIEFVADRLFVALGFEKV 319
>gi|221783|dbj|BAA00748.1| UL40 [Human herpesvirus 2]
Length = 262
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K + + EA +EI + P L+
Sbjct: 141 RDEAVHTTASCYIYNNYLGGH----AKPEAARVYRLFREAVDIEIGFIRSQAPTDSSILS 196
Query: 62 A---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y++F A+R I ++PL+ + ++ K NFFE R T Y
Sbjct: 197 PGALAAIENYVRFSADRLLGLIHMQPLYSAPAPDASFPLSLMSTDKHTNFFECRSTSYA- 255
Query: 119 GAELKW 124
GA +
Sbjct: 256 GAVVND 261
>gi|238794995|ref|ZP_04638591.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
intermedia ATCC 29909]
gi|238725698|gb|EEQ17256.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
intermedia ATCC 29909]
Length = 376
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E QQ+ + A E +A
Sbjct: 237 RDEALHLTGTQHILNLMRSGEDDPEMAEIAIECQQQCYDLFVLAAQQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F NP PW++ + + E V+
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGVPFATRTNPIPWINSWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVSAD 369
>gi|261867684|ref|YP_003255606.1| ribonucleotide-diphosphate reductase subunit beta [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413016|gb|ACX82387.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 376
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + +E +Q++ + A E +A
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKDWADYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|57790965|ref|YP_182369.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 1]
gi|5918981|gb|AAD56212.1|AF168792_13 ribonucleotide reductase small subunit [Gallid herpesvirus 1]
Length = 310
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 50/123 (40%), Gaps = 5/123 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N ++ K ++ + EA +E + P+ ++
Sbjct: 192 RDEAVHTTASCRIYNNWLGDH----KKPSAKRIHQLFKEAIEIECNFLASRAPQASRLID 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ + ++++ +R IG+ +F + ++ + K NFFE R T Y G
Sbjct: 248 LEAIQSFVRYSGDRLLTAIGVPTIFDEPPPDPSFPLTLMSIDKNVNFFEHRSTAYN-GNV 306
Query: 122 LKW 124
+
Sbjct: 307 IND 309
>gi|27904669|ref|NP_777795.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
aphidicola str. Bp (Baizongia pistaciae)]
gi|38605263|sp|Q89AS5|RIR2_BUCBP RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
AltName: Full=Ribonucleotide reductase small subunit
gi|27904066|gb|AAO26900.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera
aphidicola str. Bp (Baizongia pistaciae)]
Length = 376
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 9/132 (6%)
Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57
RDE+LHL ++N + E +KE ++ + + E +A G
Sbjct: 237 RDEALHLTSTQHILNILHNDKNNEGMSDISKECYEECYHLFIRVSDQEKIWAKYLFQNGS 296
Query: 58 V-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+ GLN QY+++I N R IGL FK NP PW++ + + E V+
Sbjct: 297 MLGLNQEILSQYIEYITNIRMKAIGLPSPFKILSNPIPWINSWLISDNVQVAPQEISVSS 356
Query: 116 Y---QQGAELKW 124
Y Q +E+
Sbjct: 357 YLIGQINSEIND 368
>gi|15602584|ref|NP_245656.1| ribonucleotide-diphosphate reductase subunit beta [Pasteurella
multocida subsp. multocida str. Pm70]
gi|12721013|gb|AAK02803.1| NrdB [Pasteurella multocida subsp. multocida str. Pm70]
Length = 376
Score = 74.6 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + +E +Q++ + A E +A
Sbjct: 237 RDEALHLTGTQHILNIMASGQDDPEMAEIVEECKQEAYDLFVAAAEQEKEWADYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|269865122|ref|XP_002651812.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063829|gb|EED42244.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 336
Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + I + ++ EA +E + E++P +G+N
Sbjct: 219 RDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFLSESLPVSLIGMN 269
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95
QY++F+A+R +G ++ + + W
Sbjct: 270 CKLMCQYIEFVADRLLFALGERKIYTFLTHSISW 303
>gi|329738368|gb|AEB97332.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 1]
Length = 310
Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 50/123 (40%), Gaps = 5/123 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N ++ K ++ + EA +E + P+ ++
Sbjct: 192 RDEAVHTTASCRIYNNWLGDH----KKPSAKRIHQLFKEAIEIECNFLASRAPQASRLID 247
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
+ + ++++ +R IG+ +F + ++ + K NFFE R T Y G
Sbjct: 248 LEAIQSFVRYSGDRLLTAIGVPTIFDEPPPDPSFPLTLMSIDKNVNFFEHRSTAYN-GNV 306
Query: 122 LKW 124
+
Sbjct: 307 IND 309
>gi|222475861|ref|YP_002564382.1| ribonucleotide reductase [Halorubrum lacusprofundi ATCC 49239]
gi|222454232|gb|ACM58496.1| ribonucleotide reductase [Halorubrum lacusprofundi ATCC 49239]
Length = 336
Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGL 60
++E +H FG+++++ I+ ENP L+ EF+ + R A E+ L
Sbjct: 205 KEEQIHGLFGVELVDTIREENPGLFDDEFEAEIREACRRAYEAEMGMLDWIFGEGELQFL 264
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
++++ N+ +G+ P+F+ ++ W E I + K+ +FF R T Y
Sbjct: 265 PREYVNEFLKDRFNQSLENVGVYPMFETDDDLLDETRWFDEDIMMTKDNDFFSKRSTTYN 324
Query: 118 QGAE 121
+ +
Sbjct: 325 KHTQ 328
>gi|30960813|gb|AAP39214.1| UL40 [Human herpesvirus 1]
gi|30960819|gb|AAP39218.1| UL40 [Human herpesvirus 1]
Length = 307
Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K ++ + +A +EI + P L+
Sbjct: 186 RDEAVHTTASCYIYNNYLGGH----AKPPPERVYGLFRQAVEIEIGFIRSQAPTDSHILS 241
Query: 62 APSC---EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y++F A+R I ++PLF + ++ K NFFE R T Y
Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 300
Query: 119 GAELKW 124
GA +
Sbjct: 301 GAVVND 306
>gi|30960831|gb|AAP39226.1| UL40 [Human herpesvirus 1]
Length = 307
Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K ++ + +A +EI + P L+
Sbjct: 186 RDEAVHTTASCYIYNNYLGGH----AKPPPERVYGLFRQAVEIEIGFIRSQAPTDSHILS 241
Query: 62 APSC---EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y++F A+R I ++PLF + ++ K NFFE R T Y
Sbjct: 242 PAALVAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 300
Query: 119 GAELKW 124
GA +
Sbjct: 301 GAVVND 306
>gi|238760194|ref|ZP_04621340.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
aldovae ATCC 35236]
gi|238701573|gb|EEP94144.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
aldovae ATCC 35236]
Length = 376
Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E QQ+ + A E +A
Sbjct: 237 RDEALHLTGTQHILNLMRAGEDDPEMAEIAIECQQQCYDLFVLAAEQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F NP PW++ + + E V+
Sbjct: 297 MIGLNKEILCQYVEYITNIRMQAVGLGIPFATRTNPIPWINSWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEISAD 369
>gi|260913913|ref|ZP_05920387.1| ribonucleoside-diphosphate reductase [Pasteurella dagmatis ATCC
43325]
gi|260632000|gb|EEX50177.1| ribonucleoside-diphosphate reductase [Pasteurella dagmatis ATCC
43325]
Length = 376
Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + +E +Q++ + A E +A
Sbjct: 237 RDEALHLTGTQHILNIMASGQDDPEMAEIVEECKQEAYDLFVAAAEQEKEWASYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|70937204|ref|XP_739440.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56516443|emb|CAH87750.1| hypothetical protein PC302623.00.0 [Plasmodium chabaudi chabaudi]
Length = 72
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 65 CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
QY++F+A+R +G +F +++NPF WM +I L+ + NFFE RV +YQ+ +
Sbjct: 3 MSQYIEFVADRLLECLGCSKVF-HSKNPFSWMD-LISLQGKTNFFEKRVADYQKSGVM 58
>gi|251792451|ref|YP_003007177.1| ribonucleotide-diphosphate reductase subunit beta [Aggregatibacter
aphrophilus NJ8700]
gi|315634378|ref|ZP_07889665.1| ribonucleotide-diphosphate reductase beta subunit [Aggregatibacter
segnis ATCC 33393]
gi|247533844|gb|ACS97090.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
aphrophilus NJ8700]
gi|315476968|gb|EFU67713.1| ribonucleotide-diphosphate reductase beta subunit [Aggregatibacter
segnis ATCC 33393]
Length = 376
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + +E +Q++ + A E +A
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKDWADYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|83814991|ref|YP_444284.1| ribonucleoside-diphosphate reductase, beta subunit [Salinibacter
ruber DSM 13855]
gi|83756385|gb|ABC44498.1| ribonucleoside-diphosphate reductase, beta subunit [Salinibacter
ruber DSM 13855]
Length = 324
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGL 60
++E +H FG++++N I+ E+P + F+Q+ R EA E L
Sbjct: 193 KEEQIHGLFGVELMNIIREEHPEWFGPAFEQEVRAACEEAYDAEQKVLDWIFADGELDFL 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQ 117
P + +++ N + ++P+F+ W E + L K +FF R T Y
Sbjct: 253 PRPVVDAFLRDKFNESLKNVDVDPIFEVDPEHLGETRWFYEEVLLTKGNDFFSKRSTSYS 312
Query: 118 Q 118
+
Sbjct: 313 K 313
>gi|237747538|ref|ZP_04578018.1| ribonucleotide-diphosphate reductase subunit beta [Oxalobacter
formigenes OXCC13]
gi|229378900|gb|EEO28991.1| ribonucleotide-diphosphate reductase subunit beta [Oxalobacter
formigenes OXCC13]
Length = 376
Score = 73.8 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + KE +++S + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMGSGEDDPDMAEIAKECREQSIDLFVRAAEQEKEWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +G+ F+ NP PW++ + + E V+
Sbjct: 297 MIGLNRDILCQYVEYITNTRMQAVGMPLPFEIRSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQIDSEVNAD 369
>gi|30960429|gb|AAP38958.1| UL40 [Human herpesvirus 1]
gi|30960468|gb|AAP38984.1| UL40 [Human herpesvirus 1]
Length = 307
Score = 73.8 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K + + +A +EI + P L+
Sbjct: 186 RDEAVHTTASCYIYNNYLGGH----AKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241
Query: 62 APSC---EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y++F A+R I ++PLF + ++ K NFFE R T Y
Sbjct: 242 PAALVAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 300
Query: 119 GAELKW 124
GA +
Sbjct: 301 GAVVND 306
>gi|52425023|ref|YP_088160.1| ribonucleotide-diphosphate reductase subunit beta [Mannheimia
succiniciproducens MBEL55E]
gi|52307075|gb|AAU37575.1| NrdF protein [Mannheimia succiniciproducens MBEL55E]
Length = 376
Score = 73.8 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + +E +Q++ + A E A+A
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQEKAWADYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E ++
Sbjct: 297 MIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDNVQVAPQEVEISS 356
Query: 116 Y 116
Y
Sbjct: 357 Y 357
>gi|30960231|gb|AAP38826.1| UL40 [Human herpesvirus 1]
gi|30960234|gb|AAP38828.1| UL40 [Human herpesvirus 1]
gi|30960237|gb|AAP38830.1| UL40 [Human herpesvirus 1]
gi|30960240|gb|AAP38832.1| UL40 [Human herpesvirus 1]
gi|30960243|gb|AAP38834.1| UL40 [Human herpesvirus 1]
gi|30960246|gb|AAP38836.1| UL40 [Human herpesvirus 1]
gi|30960249|gb|AAP38838.1| UL40 [Human herpesvirus 1]
gi|30960252|gb|AAP38840.1| UL40 [Human herpesvirus 1]
gi|30960255|gb|AAP38842.1| UL40 [Human herpesvirus 1]
gi|30960258|gb|AAP38844.1| UL40 [Human herpesvirus 1]
gi|30960261|gb|AAP38846.1| UL40 [Human herpesvirus 1]
gi|30960264|gb|AAP38848.1| UL40 [Human herpesvirus 1]
gi|30960267|gb|AAP38850.1| UL40 [Human herpesvirus 1]
gi|30960270|gb|AAP38852.1| UL40 [Human herpesvirus 1]
gi|30960273|gb|AAP38854.1| UL40 [Human herpesvirus 1]
gi|30960276|gb|AAP38856.1| UL40 [Human herpesvirus 1]
gi|30960279|gb|AAP38858.1| UL40 [Human herpesvirus 1]
gi|30960282|gb|AAP38860.1| UL40 [Human herpesvirus 1]
gi|30960285|gb|AAP38862.1| UL40 [Human herpesvirus 1]
gi|30960288|gb|AAP38864.1| UL40 [Human herpesvirus 1]
gi|30960291|gb|AAP38866.1| UL40 [Human herpesvirus 1]
gi|30960294|gb|AAP38868.1| UL40 [Human herpesvirus 1]
gi|30960297|gb|AAP38870.1| UL40 [Human herpesvirus 1]
gi|30960300|gb|AAP38872.1| UL40 [Human herpesvirus 1]
gi|30960303|gb|AAP38874.1| UL40 [Human herpesvirus 1]
gi|30960306|gb|AAP38876.1| UL40 [Human herpesvirus 1]
gi|30960309|gb|AAP38878.1| UL40 [Human herpesvirus 1]
gi|30960312|gb|AAP38880.1| UL40 [Human herpesvirus 1]
gi|30960315|gb|AAP38882.1| UL40 [Human herpesvirus 1]
gi|30960318|gb|AAP38884.1| UL40 [Human herpesvirus 1]
gi|30960321|gb|AAP38886.1| UL40 [Human herpesvirus 1]
gi|30960324|gb|AAP38888.1| UL40 [Human herpesvirus 1]
gi|30960327|gb|AAP38890.1| UL40 [Human herpesvirus 1]
gi|30960330|gb|AAP38892.1| UL40 [Human herpesvirus 1]
gi|30960333|gb|AAP38894.1| UL40 [Human herpesvirus 1]
gi|30960336|gb|AAP38896.1| UL40 [Human herpesvirus 1]
gi|30960339|gb|AAP38898.1| UL40 [Human herpesvirus 1]
gi|30960342|gb|AAP38900.1| UL40 [Human herpesvirus 1]
gi|30960345|gb|AAP38902.1| UL40 [Human herpesvirus 1]
gi|30960348|gb|AAP38904.1| UL40 [Human herpesvirus 1]
gi|30960351|gb|AAP38906.1| UL40 [Human herpesvirus 1]
gi|30960354|gb|AAP38908.1| UL40 [Human herpesvirus 1]
gi|30960357|gb|AAP38910.1| UL40 [Human herpesvirus 1]
gi|30960360|gb|AAP38912.1| UL40 [Human herpesvirus 1]
gi|30960363|gb|AAP38914.1| UL40 [Human herpesvirus 1]
gi|30960366|gb|AAP38916.1| UL40 [Human herpesvirus 1]
gi|30960369|gb|AAP38918.1| UL40 [Human herpesvirus 1]
gi|30960372|gb|AAP38920.1| UL40 [Human herpesvirus 1]
gi|30960375|gb|AAP38922.1| UL40 [Human herpesvirus 1]
gi|30960378|gb|AAP38924.1| UL40 [Human herpesvirus 1]
gi|30960381|gb|AAP38926.1| UL40 [Human herpesvirus 1]
gi|30960384|gb|AAP38928.1| UL40 [Human herpesvirus 1]
gi|30960387|gb|AAP38930.1| UL40 [Human herpesvirus 1]
gi|30960390|gb|AAP38932.1| UL40 [Human herpesvirus 1]
gi|30960393|gb|AAP38934.1| UL40 [Human herpesvirus 1]
gi|30960396|gb|AAP38936.1| UL40 [Human herpesvirus 1]
gi|30960399|gb|AAP38938.1| UL40 [Human herpesvirus 1]
gi|30960402|gb|AAP38940.1| UL40 [Human herpesvirus 1]
gi|30960405|gb|AAP38942.1| UL40 [Human herpesvirus 1]
gi|30960408|gb|AAP38944.1| UL40 [Human herpesvirus 1]
gi|30960411|gb|AAP38946.1| UL40 [Human herpesvirus 1]
gi|30960414|gb|AAP38948.1| UL40 [Human herpesvirus 1]
gi|30960417|gb|AAP38950.1| UL40 [Human herpesvirus 1]
gi|30960432|gb|AAP38960.1| UL40 [Human herpesvirus 1]
gi|30960435|gb|AAP38962.1| UL40 [Human herpesvirus 1]
gi|30960438|gb|AAP38964.1| UL40 [Human herpesvirus 1]
gi|30960441|gb|AAP38966.1| UL40 [Human herpesvirus 1]
gi|30960444|gb|AAP38968.1| UL40 [Human herpesvirus 1]
gi|30960447|gb|AAP38970.1| UL40 [Human herpesvirus 1]
gi|30960450|gb|AAP38972.1| UL40 [Human herpesvirus 1]
gi|30960453|gb|AAP38974.1| UL40 [Human herpesvirus 1]
gi|30960456|gb|AAP38976.1| UL40 [Human herpesvirus 1]
gi|30960459|gb|AAP38978.1| UL40 [Human herpesvirus 1]
gi|30960462|gb|AAP38980.1| UL40 [Human herpesvirus 1]
gi|30960471|gb|AAP38986.1| UL40 [Human herpesvirus 1]
gi|30960474|gb|AAP38988.1| UL40 [Human herpesvirus 1]
gi|30960477|gb|AAP38990.1| UL40 [Human herpesvirus 1]
gi|30960480|gb|AAP38992.1| UL40 [Human herpesvirus 1]
gi|30960483|gb|AAP38994.1| UL40 [Human herpesvirus 1]
gi|30960486|gb|AAP38996.1| UL40 [Human herpesvirus 1]
gi|30960489|gb|AAP38998.1| UL40 [Human herpesvirus 1]
gi|30960495|gb|AAP39002.1| UL40 [Human herpesvirus 1]
gi|30960498|gb|AAP39004.1| UL40 [Human herpesvirus 1]
gi|30960501|gb|AAP39006.1| UL40 [Human herpesvirus 1]
gi|30960504|gb|AAP39008.1| UL40 [Human herpesvirus 1]
gi|30960507|gb|AAP39010.1| UL40 [Human herpesvirus 1]
gi|30960510|gb|AAP39012.1| UL40 [Human herpesvirus 1]
gi|30960513|gb|AAP39014.1| UL40 [Human herpesvirus 1]
gi|30960516|gb|AAP39016.1| UL40 [Human herpesvirus 1]
gi|30960519|gb|AAP39018.1| UL40 [Human herpesvirus 1]
gi|30960522|gb|AAP39020.1| UL40 [Human herpesvirus 1]
gi|30960528|gb|AAP39024.1| UL40 [Human herpesvirus 1]
gi|30960531|gb|AAP39026.1| UL40 [Human herpesvirus 1]
gi|30960534|gb|AAP39028.1| UL40 [Human herpesvirus 1]
gi|30960537|gb|AAP39030.1| UL40 [Human herpesvirus 1]
gi|30960540|gb|AAP39032.1| UL40 [Human herpesvirus 1]
gi|30960543|gb|AAP39034.1| UL40 [Human herpesvirus 1]
gi|30960546|gb|AAP39036.1| UL40 [Human herpesvirus 1]
gi|30960549|gb|AAP39038.1| UL40 [Human herpesvirus 1]
gi|30960552|gb|AAP39040.1| UL40 [Human herpesvirus 1]
gi|30960555|gb|AAP39042.1| UL40 [Human herpesvirus 1]
gi|30960558|gb|AAP39044.1| UL40 [Human herpesvirus 1]
gi|30960561|gb|AAP39046.1| UL40 [Human herpesvirus 1]
gi|30960564|gb|AAP39048.1| UL40 [Human herpesvirus 1]
gi|30960567|gb|AAP39050.1| UL40 [Human herpesvirus 1]
gi|30960570|gb|AAP39052.1| UL40 [Human herpesvirus 1]
gi|30960573|gb|AAP39054.1| UL40 [Human herpesvirus 1]
gi|30960576|gb|AAP39056.1| UL40 [Human herpesvirus 1]
gi|30960579|gb|AAP39058.1| UL40 [Human herpesvirus 1]
gi|30960582|gb|AAP39060.1| UL40 [Human herpesvirus 1]
gi|30960585|gb|AAP39062.1| UL40 [Human herpesvirus 1]
gi|30960588|gb|AAP39064.1| UL40 [Human herpesvirus 1]
gi|30960591|gb|AAP39066.1| UL40 [Human herpesvirus 1]
gi|30960594|gb|AAP39068.1| UL40 [Human herpesvirus 1]
gi|30960597|gb|AAP39070.1| UL40 [Human herpesvirus 1]
gi|30960600|gb|AAP39072.1| UL40 [Human herpesvirus 1]
gi|30960603|gb|AAP39074.1| UL40 [Human herpesvirus 1]
gi|30960606|gb|AAP39076.1| UL40 [Human herpesvirus 1]
gi|30960609|gb|AAP39078.1| UL40 [Human herpesvirus 1]
gi|30960612|gb|AAP39080.1| UL40 [Human herpesvirus 1]
gi|30960615|gb|AAP39082.1| UL40 [Human herpesvirus 1]
gi|30960618|gb|AAP39084.1| UL40 [Human herpesvirus 1]
gi|30960621|gb|AAP39086.1| UL40 [Human herpesvirus 1]
gi|30960624|gb|AAP39088.1| UL40 [Human herpesvirus 1]
gi|30960627|gb|AAP39090.1| UL40 [Human herpesvirus 1]
gi|30960630|gb|AAP39092.1| UL40 [Human herpesvirus 1]
gi|30960633|gb|AAP39094.1| UL40 [Human herpesvirus 1]
gi|30960636|gb|AAP39096.1| UL40 [Human herpesvirus 1]
gi|30960639|gb|AAP39098.1| UL40 [Human herpesvirus 1]
gi|30960642|gb|AAP39100.1| UL40 [Human herpesvirus 1]
gi|30960645|gb|AAP39102.1| UL40 [Human herpesvirus 1]
gi|30960648|gb|AAP39104.1| UL40 [Human herpesvirus 1]
gi|30960651|gb|AAP39106.1| UL40 [Human herpesvirus 1]
gi|30960657|gb|AAP39110.1| UL40 [Human herpesvirus 1]
gi|30960660|gb|AAP39112.1| UL40 [Human herpesvirus 1]
gi|30960663|gb|AAP39114.1| UL40 [Human herpesvirus 1]
gi|30960666|gb|AAP39116.1| UL40 [Human herpesvirus 1]
gi|30960669|gb|AAP39118.1| UL40 [Human herpesvirus 1]
gi|30960672|gb|AAP39120.1| UL40 [Human herpesvirus 1]
gi|30960675|gb|AAP39122.1| UL40 [Human herpesvirus 1]
gi|30960678|gb|AAP39124.1| UL40 [Human herpesvirus 1]
gi|30960681|gb|AAP39126.1| UL40 [Human herpesvirus 1]
gi|30960684|gb|AAP39128.1| UL40 [Human herpesvirus 1]
gi|30960687|gb|AAP39130.1| UL40 [Human herpesvirus 1]
gi|30960690|gb|AAP39132.1| UL40 [Human herpesvirus 1]
gi|30960693|gb|AAP39134.1| UL40 [Human herpesvirus 1]
gi|30960696|gb|AAP39136.1| UL40 [Human herpesvirus 1]
gi|30960699|gb|AAP39138.1| UL40 [Human herpesvirus 1]
gi|30960702|gb|AAP39140.1| UL40 [Human herpesvirus 1]
gi|30960711|gb|AAP39146.1| UL40 [Human herpesvirus 1]
gi|30960714|gb|AAP39148.1| UL40 [Human herpesvirus 1]
gi|30960717|gb|AAP39150.1| UL40 [Human herpesvirus 1]
gi|30960720|gb|AAP39152.1| UL40 [Human herpesvirus 1]
gi|30960723|gb|AAP39154.1| UL40 [Human herpesvirus 1]
gi|30960726|gb|AAP39156.1| UL40 [Human herpesvirus 1]
gi|30960732|gb|AAP39160.1| UL40 [Human herpesvirus 1]
gi|30960735|gb|AAP39162.1| UL40 [Human herpesvirus 1]
gi|30960738|gb|AAP39164.1| UL40 [Human herpesvirus 1]
gi|30960741|gb|AAP39166.1| UL40 [Human herpesvirus 1]
gi|30960744|gb|AAP39168.1| UL40 [Human herpesvirus 1]
gi|30960747|gb|AAP39170.1| UL40 [Human herpesvirus 1]
gi|30960750|gb|AAP39172.1| UL40 [Human herpesvirus 1]
gi|30960756|gb|AAP39176.1| UL40 [Human herpesvirus 1]
gi|30960759|gb|AAP39178.1| UL40 [Human herpesvirus 1]
gi|30960762|gb|AAP39180.1| UL40 [Human herpesvirus 1]
gi|30960765|gb|AAP39182.1| UL40 [Human herpesvirus 1]
gi|30960768|gb|AAP39184.1| UL40 [Human herpesvirus 1]
gi|30960771|gb|AAP39186.1| UL40 [Human herpesvirus 1]
gi|30960774|gb|AAP39188.1| UL40 [Human herpesvirus 1]
gi|30960780|gb|AAP39192.1| UL40 [Human herpesvirus 1]
gi|30960783|gb|AAP39194.1| UL40 [Human herpesvirus 1]
gi|30960786|gb|AAP39196.1| UL40 [Human herpesvirus 1]
gi|30960789|gb|AAP39198.1| UL40 [Human herpesvirus 1]
gi|30960792|gb|AAP39200.1| UL40 [Human herpesvirus 1]
gi|30960795|gb|AAP39202.1| UL40 [Human herpesvirus 1]
gi|30960798|gb|AAP39204.1| UL40 [Human herpesvirus 1]
gi|30960801|gb|AAP39206.1| UL40 [Human herpesvirus 1]
gi|30960804|gb|AAP39208.1| UL40 [Human herpesvirus 1]
gi|30960807|gb|AAP39210.1| UL40 [Human herpesvirus 1]
gi|30960810|gb|AAP39212.1| UL40 [Human herpesvirus 1]
gi|30960816|gb|AAP39216.1| UL40 [Human herpesvirus 1]
gi|30960822|gb|AAP39220.1| UL40 [Human herpesvirus 1]
gi|30960825|gb|AAP39222.1| UL40 [Human herpesvirus 1]
gi|30960828|gb|AAP39224.1| UL40 [Human herpesvirus 1]
gi|30960834|gb|AAP39228.1| UL40 [Human herpesvirus 1]
gi|30960840|gb|AAP39232.1| UL40 [Human herpesvirus 1]
gi|30960843|gb|AAP39234.1| UL40 [Human herpesvirus 1]
gi|30960846|gb|AAP39236.1| UL40 [Human herpesvirus 1]
gi|30960849|gb|AAP39238.1| UL40 [Human herpesvirus 1]
gi|30960852|gb|AAP39240.1| UL40 [Human herpesvirus 1]
gi|30960855|gb|AAP39242.1| UL40 [Human herpesvirus 1]
gi|30960858|gb|AAP39244.1| UL40 [Human herpesvirus 1]
Length = 307
Score = 73.8 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K + + +A +EI + P L+
Sbjct: 186 RDEAVHTTASCYIYNNYLGGH----AKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241
Query: 62 APSC---EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y++F A+R I ++PLF + ++ K NFFE R T Y
Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 300
Query: 119 GAELKW 124
GA +
Sbjct: 301 GAVVND 306
>gi|30960753|gb|AAP39174.1| UL40 [Human herpesvirus 1]
Length = 307
Score = 73.8 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K + + +A +EI + P L+
Sbjct: 186 RDEAVHTTASCYIYNNYLGGH----AKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241
Query: 62 APSC---EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y++F A+R I ++PLF + ++ K NFFE R T Y
Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 300
Query: 119 GAELKW 124
GA +
Sbjct: 301 GAVVND 306
>gi|30960705|gb|AAP39142.1| UL40 [Human herpesvirus 1]
gi|30960777|gb|AAP39190.1| UL40 [Human herpesvirus 1]
Length = 307
Score = 73.8 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K + + +A +EI + P L+
Sbjct: 186 RDEAVHTTASCYIYNNYLGGH----AKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241
Query: 62 APSC---EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y++F A+R I ++PLF + ++ K NFFE R T Y
Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 300
Query: 119 GAELKW 124
GA +
Sbjct: 301 GAVVND 306
>gi|30960708|gb|AAP39144.1| UL40 [Human herpesvirus 1]
Length = 307
Score = 73.8 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K + + +A +EI + P L+
Sbjct: 186 RDEAVHTTASCYIYNNYLGGH----AKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241
Query: 62 APSC---EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y++F A+R I ++PLF + ++ K NFFE R T Y
Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 300
Query: 119 GAELKW 124
GA +
Sbjct: 301 GAVVND 306
>gi|30960837|gb|AAP39230.1| UL40 [Human herpesvirus 1]
Length = 307
Score = 73.8 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K + + +A +EI + P L+
Sbjct: 186 RDEAVHTTASCYIYNNYLGGH----AKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241
Query: 62 APSC---EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y++F A+R I ++PLF + ++ K NFFE R T Y
Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 300
Query: 119 GAELKW 124
GA +
Sbjct: 301 GAVVND 306
>gi|30960420|gb|AAP38952.1| UL40 [Human herpesvirus 1]
gi|30960423|gb|AAP38954.1| UL40 [Human herpesvirus 1]
gi|30960426|gb|AAP38956.1| UL40 [Human herpesvirus 1]
gi|30960465|gb|AAP38982.1| UL40 [Human herpesvirus 1]
gi|30960525|gb|AAP39022.1| UL40 [Human herpesvirus 1]
Length = 307
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K + + +A +EI + P L+
Sbjct: 186 RDEAVHTTASCYIYNNYLSGH----AKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241
Query: 62 APSC---EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y++F A+R I ++PLF + ++ K NFFE R T Y
Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 300
Query: 119 GAELKW 124
GA +
Sbjct: 301 GAVVND 306
>gi|152991848|ref|YP_001357569.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp.
NBC37-1]
gi|151423709|dbj|BAF71212.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp.
NBC37-1]
Length = 337
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 2 RDE-SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVG 59
RDE + HL ++ I+ EN + M+ +A +E+ Y H + + +G
Sbjct: 210 RDELNTHLPLFANIFKTIQKENN--IATSTIDAAYKMIQDAVKIELEYGHYLLDQFPIMG 267
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF--PWMSEVIDLKK-EKNFFETRVTEY 116
+ EQ + AN R +IGL+P+F + + +++ +++ + + NFFE+ V+ Y
Sbjct: 268 VTHELMEQTVYNYANDRLKKIGLDPIFDESATTYLQKLVTKHLEMNEVKSNFFESNVSNY 327
Query: 117 QQGA 120
+ +
Sbjct: 328 AKSS 331
>gi|161572976|ref|YP_207754.2| ribonucleotide-diphosphate reductase subunit beta [Neisseria
gonorrhoeae FA 1090]
gi|194098862|ref|YP_002001926.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
gonorrhoeae NCCP11945]
gi|239999147|ref|ZP_04719071.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
gonorrhoeae 35/02]
gi|240013945|ref|ZP_04720858.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
gonorrhoeae DGI18]
gi|240016387|ref|ZP_04722927.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
gonorrhoeae FA6140]
gi|240080506|ref|ZP_04725049.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
gonorrhoeae FA19]
gi|240113126|ref|ZP_04727616.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
gonorrhoeae MS11]
gi|240115882|ref|ZP_04729944.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
gonorrhoeae PID18]
gi|240118180|ref|ZP_04732242.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
gonorrhoeae PID1]
gi|240121514|ref|ZP_04734476.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
gonorrhoeae PID24-1]
gi|240123728|ref|ZP_04736684.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
gonorrhoeae PID332]
gi|240125919|ref|ZP_04738805.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
gonorrhoeae SK-92-679]
gi|240128431|ref|ZP_04741092.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
gonorrhoeae SK-93-1035]
gi|193934152|gb|ACF29976.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
gonorrhoeae NCCP11945]
Length = 377
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E Q + + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ +NP PW++ + + E ++
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLSSDNVQVAPQEVEIS 356
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 SYLIGQIDSEVNTD 370
>gi|417659|sp|P32209|RIR2_SWPVK RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|347472|gb|AAC37857.1| ribonucleotide reductase [Swinepox virus]
Length = 274
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL ++ +++ +A +E + +P +G+N
Sbjct: 195 RDEGLHCDFACLMFK-------HLLHPPSKEVITSIIIDAVNIEKEFLTVAIPVDLIGMN 247
Query: 62 APSCEQYMQFIANRRCHQIGLEP 84
QY++F+A+R ++G E
Sbjct: 248 CCLMSQYIEFVADRLLTELGCEK 270
>gi|257464834|ref|ZP_05629205.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
minor 202]
gi|257450494|gb|EEV24537.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
minor 202]
Length = 326
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
++E +H FGI + ++ E+ L+T F ++ +T+ ++A E +
Sbjct: 195 KEEEIHGKFGIALYEILRDEHSELFTPAFFEELQTLANQAFEAEKGILDWIFEEGDLSFI 254
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
+ + Y++ N +GLEP W I KE +FF R T+Y
Sbjct: 255 SKETVLNYIKSRYNNSLVTLGLEPPHNINPELLKETAWFDIEILSTKETDFFNKRSTDYS 314
Query: 118 Q 118
+
Sbjct: 315 K 315
>gi|145634465|ref|ZP_01790175.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
influenzae PittAA]
gi|229845068|ref|ZP_04465204.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
influenzae 6P18H1]
gi|229846892|ref|ZP_04466999.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
influenzae 7P49H1]
gi|145268445|gb|EDK08439.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
influenzae PittAA]
gi|229810381|gb|EEP46100.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
influenzae 7P49H1]
gi|229812040|gb|EEP47733.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
influenzae 6P18H1]
Length = 376
Score = 73.4 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + L +E +Q++ + A E A+A
Sbjct: 237 RDEALHLTGTQHILNIMAAGQDDLEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F+ NP PW++ + + E V+
Sbjct: 297 MIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|30960729|gb|AAP39158.1| UL40 [Human herpesvirus 1]
Length = 307
Score = 73.4 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K + + +A +EI + P L+
Sbjct: 186 RDEAVHTTASCYIYNNYLGGH----AKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241
Query: 62 APSC---EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y++F A+R I ++PLF + ++ K NFFE R T Y
Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 300
Query: 119 GAELKW 124
GA +
Sbjct: 301 GAVVND 306
>gi|30960654|gb|AAP39108.1| UL40 [Human herpesvirus 1]
Length = 307
Score = 73.4 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + N + K + + +A +EI + P L+
Sbjct: 186 RDEAVHTTASCYIYNNYLGGH----AKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241
Query: 62 APSC---EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y++F A+R I ++PLF + ++ K NFFE R T Y
Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 300
Query: 119 GAELKW 124
GA +
Sbjct: 301 GAVVND 306
>gi|319760602|ref|YP_004124540.1| ribonucleoside-diphosphate reductase 1 subunit beta [Candidatus
Blochmannia vafer str. BVAF]
gi|318039316|gb|ADV33866.1| ribonucleoside-diphosphate reductase 1 subunit beta [Candidatus
Blochmannia vafer str. BVAF]
Length = 376
Score = 73.4 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDESLHL+ ++N ++ ++P + + +Q +S + A E +AH
Sbjct: 237 RDESLHLSATQHILNLMQSGADDPEMAEISLMYQSESYNLFLMAAEQEKMWAHYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R IGL+ F N PW++ + + E +
Sbjct: 297 MIGLNKEILCQYIEYITNIRMQAIGLKAPFHIKANVIPWINSWLVSDNVQVAPQEVESSS 356
Query: 116 Y---QQGAELKWD 125
Y Q ++ D
Sbjct: 357 YLVGQINTQINDD 369
>gi|254493923|ref|ZP_05107094.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae 1291]
gi|260440303|ref|ZP_05794119.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
gonorrhoeae DGI2]
gi|268594982|ref|ZP_06129149.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
gonorrhoeae 35/02]
gi|268596639|ref|ZP_06130806.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
gonorrhoeae FA19]
gi|268599210|ref|ZP_06133377.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae MS11]
gi|268601557|ref|ZP_06135724.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID18]
gi|268603896|ref|ZP_06138063.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID1]
gi|268682359|ref|ZP_06149221.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID332]
gi|268684517|ref|ZP_06151379.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
SK-92-679]
gi|268686827|ref|ZP_06153689.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
SK-93-1035]
gi|291043595|ref|ZP_06569311.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
gonorrhoeae DGI2]
gi|293398906|ref|ZP_06643071.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
gonorrhoeae F62]
gi|59717937|gb|AAW89342.1| putative ribonucleoside diphosphate reductase I beta chain
[Neisseria gonorrhoeae FA 1090]
gi|226512963|gb|EEH62308.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae 1291]
gi|268548371|gb|EEZ43789.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
gonorrhoeae 35/02]
gi|268550427|gb|EEZ45446.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
gonorrhoeae FA19]
gi|268583341|gb|EEZ48017.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae MS11]
gi|268585688|gb|EEZ50364.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID18]
gi|268588027|gb|EEZ52703.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID1]
gi|268622643|gb|EEZ55043.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID332]
gi|268624801|gb|EEZ57201.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
SK-92-679]
gi|268627111|gb|EEZ59511.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
SK-93-1035]
gi|291012058|gb|EFE04047.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
gonorrhoeae DGI2]
gi|291610320|gb|EFF39430.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
gonorrhoeae F62]
Length = 384
Score = 73.4 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E Q + + +A E +A
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ +NP PW++ + + E ++
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLSSDNVQVAPQEVEIS 363
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 364 SYLIGQIDSEVNTD 377
>gi|172054963|ref|YP_001806290.1| ribonucleoside-diphosphate reductase subunit beta [Cyanothece sp.
ATCC 51142]
gi|171701244|gb|ACB54224.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
ATCC 51142]
Length = 347
Score = 73.4 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 8/124 (6%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DE H++ +I + K + + + + + EI + + +G++
Sbjct: 222 DELTHVSLYQKLITEAKTKFSY-----SEDEITELFVNTVEKEIEWTNHIFDGQILGVSE 276
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENP---FPWMSEVIDLKKEKNFFETRVTEYQQG 119
S E Y +++AN R IG+ ++ ENP W K + FFET VT Y Q
Sbjct: 277 ASTEAYTKYLANLRLKAIGISAIYPEVENPYAHLDWADFKGIGKSKAAFFETEVTGYAQP 336
Query: 120 AELK 123
+K
Sbjct: 337 TAVK 340
>gi|307257037|ref|ZP_07538813.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306864521|gb|EFM96428.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 376
Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE LHL +++N I ++P + +E +Q++ + A E +A
Sbjct: 237 RDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN +Y+++I N R +GL F NP PW++ + + E V+
Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPFATASNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|126208467|ref|YP_001053692.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
pleuropneumoniae L20]
gi|165976419|ref|YP_001652012.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|303251074|ref|ZP_07337260.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307250239|ref|ZP_07532194.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307252630|ref|ZP_07534523.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307261475|ref|ZP_07543145.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|126097259|gb|ABN74087.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165876520|gb|ABY69568.1| ribonucleoside-diphosphate reductase, beta chain [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|302650084|gb|EFL80254.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306857725|gb|EFM89826.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306859875|gb|EFM91895.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306868827|gb|EFN00634.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 376
Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE LHL +++N I ++P + +E +Q++ + A E +A
Sbjct: 237 RDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN +Y+++I N R +GL F + NP PW++ + + E V+
Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPFAASSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|190150315|ref|YP_001968840.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303253584|ref|ZP_07339722.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307245900|ref|ZP_07527985.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307247988|ref|ZP_07530018.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307254872|ref|ZP_07536697.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307259315|ref|ZP_07541044.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307263658|ref|ZP_07545269.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|189915446|gb|ACE61698.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302647504|gb|EFL77722.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306853260|gb|EFM85480.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306855503|gb|EFM87676.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306862169|gb|EFM94138.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306866682|gb|EFM98541.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306871035|gb|EFN02768.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 376
Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE LHL +++N I ++P + +E +Q++ + A E +A
Sbjct: 237 RDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN +Y+++I N R +GL F + NP PW++ + + E V+
Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPFAASSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|157371509|ref|YP_001479498.1| ribonucleotide-diphosphate reductase subunit beta [Serratia
proteamaculans 568]
gi|157323273|gb|ABV42370.1| Ribonucleoside-diphosphate reductase [Serratia proteamaculans 568]
Length = 376
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWTK--EFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E QQ+ + A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAEQEKEWAEYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL F NP PW++ + + E V+
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLGLPFATRSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|294788520|ref|ZP_06753762.1| ribonucleoside-diphosphate reductase, beta subunit [Simonsiella
muelleri ATCC 29453]
gi|294483397|gb|EFG31082.1| ribonucleoside-diphosphate reductase, beta subunit [Simonsiella
muelleri ATCC 29453]
Length = 384
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 7/122 (5%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E + + +A E +A
Sbjct: 244 RDEALHLTSTQHMLNLMRNGTDDPEMAEIAAELHDECVALFKKAAAQEKEWAAYLFKDGS 303
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F +NP PW++ + + E ++
Sbjct: 304 MIGLNKDILGQYVEYITNLRMSAVGLPQAFPKALQNPIPWINAWLSSDNVQVAPQEVEIS 363
Query: 115 EY 116
Y
Sbjct: 364 SY 365
>gi|309379219|emb|CBX22176.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 384
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E Q++ + +A E +A
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAEELQEECFKLFKKAAEQEKEWAAYLFKDGS 303
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ +NP PW++ + + E ++
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLSSDNVQVAPQEVEIS 363
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 364 SYLIGQIDSEVNTD 377
>gi|159146681|gb|ABW90785.1| ribonucleotide reductase subunit 2 [Leporid herpesvirus 4]
Length = 316
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP---KGFV 58
RDE++H + N + K ++ + + A +EIA+ P +
Sbjct: 195 RDEAVHTTASCCLYNNYLGQY----AKPPSERIKQLFSNAVEIEIAFIKAKAPANSRILD 250
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
G + E Y++F A+R IG LF + ++ +K NFFE R T Y
Sbjct: 251 GAAIAAIESYVRFSADRLLKLIGEPALFDEPPPNDGFPLRLMSTEKHTNFFECRSTAYA- 309
Query: 119 GAELKW 124
GA +
Sbjct: 310 GAVVND 315
>gi|240950330|ref|ZP_04754600.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
minor NM305]
gi|240295141|gb|EER45960.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
minor NM305]
Length = 326
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 4/121 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
++E +H FGI + ++ E+ L+T F ++ +T+ +A E +
Sbjct: 195 KEEEIHGKFGIALYEILRDEHSELFTPAFFEELQTLASQAFEAEKGILDWIFEEGDLSFI 254
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
+ + Y++ N +GLEP W I KE +FF R T+Y
Sbjct: 255 SKETVLNYIKSRYNNSLVTLGLEPPHDINPELLKETAWFDIEILSTKETDFFNKRSTDYS 314
Query: 118 Q 118
+
Sbjct: 315 K 315
>gi|322514736|ref|ZP_08067762.1| ribonucleotide-diphosphate reductase beta subunit [Actinobacillus
ureae ATCC 25976]
gi|322119331|gb|EFX91447.1| ribonucleotide-diphosphate reductase beta subunit [Actinobacillus
ureae ATCC 25976]
Length = 376
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE LHL +++N + ++P + +E +Q++ + A E +A
Sbjct: 237 RDEYLHLTGTQNMLNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN +Y+++I N R +GL F + NP PW++ + + E V+
Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPFATSSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|4389291|pdb|1BIQ|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant
E238a
Length = 375
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RD +LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 236 RDAALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 356 YLVGQIDSEVDTD 368
>gi|261364564|ref|ZP_05977447.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
mucosa ATCC 25996]
gi|288567131|gb|EFC88691.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
mucosa ATCC 25996]
Length = 384
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWTK--EFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E Q + + +A E +A
Sbjct: 244 RDEALHLTSTQHMLNLMRAGSDDPEMAEIAVELQDECFELFKKAAEQEKEWAAYLFKDGS 303
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ T+NP PW++ + + E ++
Sbjct: 304 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLSSDNVQVAPQEVEIS 363
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 364 SYLIGQIDSEVSAD 377
>gi|42543295|pdb|1PM2|A Chain A, Crystal Structure Of Manganese Substituted R2-D84e (D84e
Mutant Of The R2 Subunit Of E. Coli Ribonucleotide
Reductase)
gi|42543296|pdb|1PM2|B Chain B, Crystal Structure Of Manganese Substituted R2-D84e (D84e
Mutant Of The R2 Subunit Of E. Coli Ribonucleotide
Reductase)
Length = 339
Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
+GLN QY+++I N R +GL+ F NP PW++ +
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWL 339
>gi|4389292|pdb|1BIQ|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant
E238a
gi|40889714|pdb|1RSV|A Chain A, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of
Ribonucleotide Reductase
gi|40889715|pdb|1RSV|B Chain B, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of
Ribonucleotide Reductase
Length = 375
Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RD +LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 236 RDAALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 355
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 356 YLVGQIDSEVDTD 368
>gi|301750612|gb|ADK88940.1| ribonucleotide reductase subunit 2 [Leporid herpesvirus 4]
Length = 316
Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP---KGFV 58
RDE++H + N + K ++ + + A +EIA+ P +
Sbjct: 195 RDEAVHTTASCCLYNNYLGQY----AKPPSERIKQLFSNAVEIEIAFIKAKAPANSRILD 250
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
G + E Y++F A+R IG LF + ++ +K NFFE R T Y
Sbjct: 251 GAAIAAIESYVRFSADRLLKLIGEPALFDEPPPNDGFPLRLMSTEKHTNFFECRSTAYA- 309
Query: 119 GAELKW 124
GA +
Sbjct: 310 GAVVND 315
>gi|284799957|ref|ZP_05985309.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
subflava NJ9703]
gi|284796454|gb|EFC51801.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
subflava NJ9703]
Length = 377
Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E Q + + +A E +A
Sbjct: 237 RDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQEKEWAAYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ T+NP PW++ + + E ++
Sbjct: 297 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLSSDNVQVAPQEVEIS 356
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 SYLIGQIDSEVNAD 370
>gi|76803441|ref|YP_327710.1| ribonucleoside-diphosphate reductase, beta subunit 1 [Natronomonas
pharaonis DSM 2160]
gi|76559256|emb|CAI50863.1| ribonucleoside-diphosphate reductase, beta subunit 1 [Natronomonas
pharaonis DSM 2160]
Length = 336
Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGL 60
++E +H FG++++ I+ ENP L+ ++F+++ + A E+ L
Sbjct: 205 KEEQIHGLFGVELVETIREENPDLFDEDFEEEVQAACQRAFEAEMKILDWIFGEGELEFL 264
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
+ +++ N+ +G+EP+F+ + W E I + K+ +FF R T Y
Sbjct: 265 PRTHVDAFLRDRFNQSLENVGVEPIFEPDDGLLEETRWFDEDIMMTKDNDFFSKRSTTYN 324
Query: 118 QGAE 121
+ A+
Sbjct: 325 KHAQ 328
>gi|307107666|gb|EFN55908.1| hypothetical protein CHLNCDRAFT_57791 [Chlorella variabilis]
Length = 849
Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H+ + + ++ +K +++ ++ EA E A+ +P GL
Sbjct: 756 RDEGVHVESAGVMYSLLR-------SKLTDSQAQGIVGEAVEAERAFVCGQLPLEATGLE 808
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
A + E+Y+Q++ +R +G PL++ NP PW+
Sbjct: 809 AGAMEEYLQYVGDRLLGALGHAPLYRVAANPLPWLE 844
>gi|255065945|ref|ZP_05317800.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sicca
ATCC 29256]
gi|255049856|gb|EET45320.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sicca
ATCC 29256]
Length = 377
Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHLWTK--EFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E Q + + +A E +A
Sbjct: 237 RDEALHLTSTQHMLNLMRAGSDDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ T+NP PW++ + + E ++
Sbjct: 297 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLSSDNVQVAPQEVEIS 356
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 SYLIGQIDSEVSAD 370
>gi|313206313|ref|YP_004045490.1| ribonucleotide reductase [Riemerella anatipestifer DSM 15868]
gi|312445629|gb|ADQ81984.1| ribonucleotide reductase [Riemerella anatipestifer DSM 15868]
gi|315023179|gb|EFT36190.1| ribonucleotide reductase [Riemerella anatipestifer RA-YM]
gi|325336242|gb|ADZ12516.1| ribonucleoside-diphosphate reductase beta chain [Riemerella
anatipestifer RA-GD]
Length = 324
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 4/120 (3%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF-VGLN 61
DE +H N GI +IN+IK E P L +E + ++ + LE G L+
Sbjct: 194 DEQIHANAGIYIINKIKEEQPELLQEEDIEAIYNIVKTSVELEAEILDWIFEMGDLDHLS 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+M++ + +IG+ +F TE P W E + +FF R +Y +
Sbjct: 254 KKQLLSFMKYRIDDSLKRIGMASMFNITEEEYKPMVWFEEEVFANSLDDFFAKRPVDYTK 313
>gi|317164437|gb|ADV07978.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 377
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E Q + + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ +NP PW++ + + E ++
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLSAGFEGANQNPIPWINAWLSSDNVQVAPQEVEIS 356
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 SYLIGQIDSEVNTD 370
>gi|313668429|ref|YP_004048713.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
lactamica ST-640]
gi|313005891|emb|CBN87347.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
lactamica 020-06]
Length = 377
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E Q + + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFRLFKKAAEQEKEWAAYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ +NP PW++ + + E ++
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLSSDNVQVAPQEVEIS 356
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 SYLIGQIDSEVNTD 370
>gi|212712302|ref|ZP_03320430.1| hypothetical protein PROVALCAL_03388 [Providencia alcalifaciens DSM
30120]
gi|212685048|gb|EEB44576.1| hypothetical protein PROVALCAL_03388 [Providencia alcalifaciens DSM
30120]
Length = 380
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LHL ++N ++ E +++ + +A E +A
Sbjct: 241 RDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEEECYRLFVDAAEQEKEWAEYLFSEGS 300
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 301 MIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWINAWLVSDNVQVAPQEVEVSS 360
Query: 116 YQQG 119
Y G
Sbjct: 361 YLVG 364
>gi|261400675|ref|ZP_05986800.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
lactamica ATCC 23970]
gi|269209585|gb|EEZ76040.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
lactamica ATCC 23970]
Length = 377
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E Q + + +A E +A
Sbjct: 237 RDEALHLTSTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ +NP PW++ + + E ++
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLSSDNVQVAPQEVEIS 356
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 SYLIGQIDSEVNTD 370
>gi|91775577|ref|YP_545333.1| ribonucleotide-diphosphate reductase subunit beta [Methylobacillus
flagellatus KT]
gi|91709564|gb|ABE49492.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Methylobacillus flagellatus KT]
Length = 377
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 7/122 (5%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P E Q + M A E +A
Sbjct: 237 RDEALHLTGTQHMLNIMRSGQDDPEFAGIASELQDECFEMFKRAAEQEKKWADYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F NP PW++ + + E ++
Sbjct: 297 MIGLNRDILCQYVEYITNNRMASVGLSAAFPNAKNNPIPWINTWLASDTVQVAPQEVELS 356
Query: 115 EY 116
Y
Sbjct: 357 SY 358
>gi|298368555|ref|ZP_06979873.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sp.
oral taxon 014 str. F0314]
gi|298282558|gb|EFI24045.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sp.
oral taxon 014 str. F0314]
Length = 384
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWTK--EFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E Q + + +A E +A
Sbjct: 244 RDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFKDGS 303
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ T+NP PW++ + + E ++
Sbjct: 304 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLSSDNVQVAPQEVEIS 363
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 364 SYLIGQIDSEVSAD 377
>gi|241760495|ref|ZP_04758588.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
flavescens SK114]
gi|241318999|gb|EER55501.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
flavescens SK114]
Length = 377
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWTK--EFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E Q + + +A E +A
Sbjct: 237 RDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ T+NP PW++ + + E ++
Sbjct: 297 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLSSDNVQVAPQEVEIS 356
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 SYLIGQIDSEVSAD 370
>gi|256820037|ref|YP_003141316.1| ribonucleotide reductase [Capnocytophaga ochracea DSM 7271]
gi|315225453|ref|ZP_07867266.1| ribonucleoside-diphosphate reductase [Capnocytophaga ochracea
F0287]
gi|256581620|gb|ACU92755.1| ribonucleotide reductase [Capnocytophaga ochracea DSM 7271]
gi|314944551|gb|EFS96587.1| ribonucleoside-diphosphate reductase [Capnocytophaga ochracea
F0287]
Length = 319
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 5/120 (4%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGLN 61
DE LH N GI ++ +I ENP + K ++ + T + LE +
Sbjct: 190 DEQLHANAGIYILKKIFEENPEMKAKA-EEDATTFIRSYITLEDKMLDWIFEQGELEFFS 248
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
YM++ + Q+GL F + P W E + + +FF R T Y +
Sbjct: 249 KKDLSNYMRYRLDDSLTQLGLGKPFGISGEEAKPMMWFEEEVFSNELDDFFAKRPTAYTK 308
>gi|124487872|gb|ABN12019.1| putative ribonucleotide reductase R2 subunit [Maconellicoccus
hirsutus]
Length = 249
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 4 ESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 63
ESL+ +F + ++ + ++ ++ EA ++E ++ + +P +G++
Sbjct: 127 ESLYTDFACLLFKRLVQ-------RPSVEEITEIIREAVIIEQEFSTKGLPVSLIGMDCE 179
Query: 64 SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
Y++F+A+R + +F NPF +M
Sbjct: 180 LMTTYIEFVADRLLQALNCPKVFGVP-NPFGFME 212
>gi|319638203|ref|ZP_07992966.1| ribonucleoside diphosphate reductase subunit I beta [Neisseria
mucosa C102]
gi|317400476|gb|EFV81134.1| ribonucleoside diphosphate reductase subunit I beta [Neisseria
mucosa C102]
Length = 384
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E Q + + +A E +A
Sbjct: 244 RDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQEKEWAAYLFKDGS 303
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ T+NP PW++ + + E ++
Sbjct: 304 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLSSDNVQVAPQEVEIS 363
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 364 SYLIGQIDSEVSAD 377
>gi|167856024|ref|ZP_02478769.1| ribonucleotide-diphosphate reductase subunit alpha [Haemophilus
parasuis 29755]
gi|219871494|ref|YP_002475869.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
parasuis SH0165]
gi|167852863|gb|EDS24132.1| ribonucleotide-diphosphate reductase subunit alpha [Haemophilus
parasuis 29755]
gi|219691698|gb|ACL32921.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
parasuis SH0165]
Length = 325
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
++E +H FGI + + E+ L+T EF ++ +T+ +A E +
Sbjct: 194 KEEEIHGRFGIALYEILSDEHSELFTPEFFEELKTLSQQAFEAERGILDWIFEEGDLSFI 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
+ + E Y+ N +GLEP + W I KE +FF R T+Y
Sbjct: 254 SRKTVENYIMNRYNNSLSILGLEPPYDVDPELLKETEWFDIEIISTKETDFFNKRSTDYS 313
Query: 118 Q 118
+
Sbjct: 314 K 314
>gi|242012701|ref|XP_002427066.1| Ribonucleoside-diphosphate reductase M2 subunit, putative
[Pediculus humanus corporis]
gi|212511324|gb|EEB14328.1| Ribonucleoside-diphosphate reductase M2 subunit, putative
[Pediculus humanus corporis]
Length = 304
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + K + + ++ +A +E + E +P +G+N
Sbjct: 226 RDEGLHCDFACLMFKYVVQ-------KPTEDEICDIIKDAVAIEQEFLTEALPVNLIGMN 278
Query: 62 APSCEQYMQFIANRRCHQIGLEPL 85
++Y++F+A+R ++G + +
Sbjct: 279 CSLMKKYIEFVADRLLVELGCKKV 302
>gi|213962351|ref|ZP_03390614.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
sputigena Capno]
gi|213955017|gb|EEB66336.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
sputigena Capno]
Length = 319
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 5/120 (4%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGLN 61
DE LH N GI ++ +I E P + T + + LLE +
Sbjct: 190 DEQLHANAGIYILKKIFEERPEMKTIAEHEA-TNFIRNYILLEDKMLDWIFEQGELEFFS 248
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
YM++ + Q+GL+ F + P W E + + +FF R T Y +
Sbjct: 249 KKDLANYMRYRLDDSLTQLGLDKPFNISGDEAKPMMWFEEEVFSNELDDFFAKRPTAYTK 308
>gi|225075859|ref|ZP_03719058.1| hypothetical protein NEIFLAOT_00882 [Neisseria flavescens
NRL30031/H210]
gi|224952805|gb|EEG34014.1| hypothetical protein NEIFLAOT_00882 [Neisseria flavescens
NRL30031/H210]
Length = 388
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E Q + + +A E +A
Sbjct: 248 RDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQEKEWAAYLFKDGS 307
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ T+NP PW++ + + E ++
Sbjct: 308 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLSSDNVQVAPQEVEIS 367
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 368 SYLIGQIDSEVNAD 381
>gi|88801652|ref|ZP_01117180.1| ribonucleoside-diphosphate reductase, beta subunit [Polaribacter
irgensii 23-P]
gi|88782310|gb|EAR13487.1| ribonucleoside-diphosphate reductase, beta subunit [Polaribacter
irgensii 23-P]
Length = 424
Score = 71.9 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 6/130 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF-VGL 60
++E +H +FGID+I IK ENP + ++ + M EA + E KG L
Sbjct: 293 KEEQIHGDFGIDIIKIIKEENPDWFDEDHSLMVQEMCEEAFISESKIIDWIFEKGELDFL 352
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQ 117
+++++ N+ IG+ +F+ W + I K +FF R Y
Sbjct: 353 PKNVIKEFIKNRFNKSLGSIGIAKIFEIDATLLAQTDWFDDEIIGTKHGDFFVKRSINYS 412
Query: 118 Q--GAELKWD 125
+ + D
Sbjct: 413 KRTKSITSDD 422
>gi|225023977|ref|ZP_03713169.1| hypothetical protein EIKCOROL_00844 [Eikenella corrodens ATCC
23834]
gi|224943002|gb|EEG24211.1| hypothetical protein EIKCOROL_00844 [Eikenella corrodens ATCC
23834]
Length = 384
Score = 71.9 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 7/122 (5%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E + + +A E +A
Sbjct: 244 RDEALHLTSTQHMLNLMRSGTDDPEMAEIAAELENDCFELFKKAAEQEKEWAEYLFKDGS 303
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F T+NP PW++ + + E ++
Sbjct: 304 MIGLNKDILCQYVEYITNHRMMAVGLNAAFPAATQNPIPWINAWLSSDNVQVAPQEVEIS 363
Query: 115 EY 116
Y
Sbjct: 364 SY 365
>gi|238897538|ref|YP_002923217.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229465295|gb|ACQ67069.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 376
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL +++ ++ ++P + +E QQ+ + A E +A
Sbjct: 237 RDEALHLMGTQHMLDLMRSGKDDPEMADIAQECQQECSDLFLLAAQQEKEWAAYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY++++ N R + L+ F NP PW++ + + E V+
Sbjct: 297 MIGLNQDILCQYIEYMTNIRMQAVKLDAPFSIRTNPIPWINSWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|269213593|ref|ZP_05982340.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
cinerea ATCC 14685]
gi|269146056|gb|EEZ72474.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
cinerea ATCC 14685]
Length = 377
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E Q++ + +A E +A
Sbjct: 237 RDEALHLTSTQHMLNLMRSGVDDPEMAEIAEELQEECFKLFKKAAEQEKEWAAYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ +NP PW++ + + E ++
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPIGFEGANQNPIPWINAWLSSDNVQVAPQEVEIS 356
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 SYLIGQIDSEVSTD 370
>gi|149408186|ref|YP_001294620.1| hypothetical protein ORF027 [Pseudomonas phage PA11]
Length = 322
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 47/130 (36%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIE---NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
+RDE+LH G + N +K E + H E K
Sbjct: 191 VRDENLHCEGGAWLYNTLKQEIKSEGGYINPNLEYDLANCAHTIAEHEFRIVDMIFEKGE 250
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKNFFETRVTE 115
G+ A + +++ N Q+G+EP+F+ + N W + I+ +FF
Sbjct: 251 MEGITAEQMKTFVKSRVNICLAQLGIEPVFEVSNNIVAEWFYDGINGVMFHDFFSGIGNS 310
Query: 116 YQQGAELKWD 125
Y + WD
Sbjct: 311 YNR----SWD 316
>gi|146329200|ref|YP_001209518.1| ribonucleotide reductase, beta subunit [Dichelobacter nodosus
VCS1703A]
gi|146232670|gb|ABQ13648.1| ribonucleotide reductase, beta subunit [Dichelobacter nodosus
VCS1703A]
Length = 325
Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 4/124 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVGL 60
++E +H FGI + + IK E+P L+T F +T+ +A E + L
Sbjct: 194 KEEEIHGRFGIALYHIIKEEHPDLFTDSFYHHLKTLADQALAAERGILNWIFENGDLPFL 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
+ E Y+ N +G+E + E W I KE +FF R T+Y
Sbjct: 254 QQKTVENYIVNRYNNSLSVLGIESPYTVDEERLKETQWFDIEILSGKENDFFYKRSTDYS 313
Query: 118 QGAE 121
+ +
Sbjct: 314 KKTK 317
>gi|30960492|gb|AAP39000.1| UL40 [Human herpesvirus 1]
Length = 307
Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 49/126 (38%), Gaps = 8/126 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE++H + + K + + +A +EI + P L+
Sbjct: 186 RDEAVHTTASCYIYTNYLGGH----AKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHILS 241
Query: 62 APSC---EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ E Y++F A+R I ++PLF + ++ K NFFE R T Y
Sbjct: 242 PAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSYA- 300
Query: 119 GAELKW 124
GA +
Sbjct: 301 GAVVND 306
>gi|33152746|ref|NP_874099.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
ducreyi 35000HP]
gi|33148970|gb|AAP96488.1| ribonucleoside-diphosphate reductase, beta chain [Haemophilus
ducreyi 35000HP]
Length = 376
Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE LHL ++N I ++P + E QQ++ + A E +A
Sbjct: 237 RDEYLHLAGTQQMLNIIASGQDDPEMAEIAIECQQEAYDLFVAAAEQEKEWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN +Y+++I N R +GL F NP PW++ + + E V+
Sbjct: 297 MIGLNKEILVKYVEYITNIRMQSVGLPLPFATQSNPIPWINAWLVSDNVQVAPQEVEVSS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|146301802|ref|YP_001196393.1| ribonucleotide reductase [Flavobacterium johnsoniae UW101]
gi|146156220|gb|ABQ07074.1| ribonucleotide reductase [Flavobacterium johnsoniae UW101]
Length = 324
Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 45/120 (37%), Gaps = 4/120 (3%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGLN 61
DE +H N GI +IN+I+ E P + +E R + ++ +E +
Sbjct: 194 DEQIHANGGIYIINKIREEFPDYFDEETLALVRETVKDSIAVESDILDWIFEEGEIESIK 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+M+F + QI + +F W E + +FF R EY +
Sbjct: 254 KGDLVNFMKFRIDESLKQINIPVIFDVKVEDYKALAWFEEEVFANSLDDFFAKRPVEYTK 313
>gi|297250515|ref|ZP_06864465.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
polysaccharea ATCC 43768]
gi|296838835|gb|EFH22773.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
polysaccharea ATCC 43768]
Length = 377
Score = 71.1 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++ + E Q + + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ +NP PW++ + + E ++
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLSSDNVQVAPQEVEIS 356
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 SYLIGQIDSEVNTD 370
>gi|161353784|ref|NP_274308.2| ribonucleotide-diphosphate reductase subunit beta [Neisseria
meningitidis MC58]
gi|304387414|ref|ZP_07369605.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
meningitidis ATCC 13091]
gi|304338507|gb|EFM04626.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
meningitidis ATCC 13091]
gi|316984078|gb|EFV63056.1| ribonucleoside-diphosphate reductase 1 subunit beta [Neisseria
meningitidis H44/76]
gi|325134468|gb|EGC57113.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
meningitidis M13399]
gi|325140485|gb|EGC63006.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
meningitidis CU385]
gi|325144569|gb|EGC66868.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
meningitidis M01-240013]
gi|325200084|gb|ADY95539.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
meningitidis H44/76]
gi|325204292|gb|ADY99745.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
meningitidis M01-240355]
gi|325205936|gb|ADZ01389.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
meningitidis M04-240196]
Length = 377
Score = 71.1 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++ + E Q + + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ +NP PW++ + + E ++
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLSSDNVQVAPQEVEIS 356
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 SYLIGQIDSEVNTD 370
>gi|319957101|ref|YP_004168364.1| ribonucleoside-diphosphate reductase [Nitratifractor salsuginis DSM
16511]
gi|319419505|gb|ADV46615.1| Ribonucleoside-diphosphate reductase [Nitratifractor salsuginis DSM
16511]
Length = 337
Score = 71.1 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 7/129 (5%)
Query: 2 RDE-SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF-VG 59
RDE + HL ++ I EN K+ M+ EA +E+ Y + +G
Sbjct: 210 RDEINTHLPLFANIFKTIYKENK--IPASIVDKAYEMIQEAVDIELEYGKYLLENYPIMG 267
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF--PWMSEVIDLKKE-KNFFETRVTEY 116
L E+ + AN R ++IGLEP+F+ T + + + + + NFFE+ V Y
Sbjct: 268 LTDELMEKTVYNYANDRLNKIGLEPIFEETPQTYLQKLVEKHLKMNDVRSNFFESNVANY 327
Query: 117 QQGAELKWD 125
+ + D
Sbjct: 328 AKNSLDLDD 336
>gi|297622357|ref|YP_003703791.1| ribonucleotide reductase [Truepera radiovictrix DSM 17093]
gi|297163537|gb|ADI13248.1| ribonucleotide reductase [Truepera radiovictrix DSM 17093]
Length = 324
Score = 71.1 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 4/123 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
++E +H FG ++ ++ E P + F + R +A E A L
Sbjct: 191 KEEQIHGMFGYKLVETLRRERPEWFGAAFSARLRAACVDAERAERAILRWICEAGALPFL 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQ 117
E +MQ N +G PL++ P W E + K+ +FF R T Y
Sbjct: 251 PLAQLEAFMQARFNGALVALGEAPLWEVDPALLAPTRWFEEELLSSKQVDFFHKRPTAYA 310
Query: 118 QGA 120
+
Sbjct: 311 KKT 313
>gi|1941986|pdb|1PFR|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
gi|1941987|pdb|1PFR|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
Length = 340
Score = 71.1 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
+GLN QY+++I N R +GL+ F+ NP PW++ +
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL 339
>gi|3891582|pdb|1AV8|A Chain A, Ribonucleotide Reductase R2 Subunit From E. Coli
gi|3891583|pdb|1AV8|B Chain B, Ribonucleotide Reductase R2 Subunit From E. Coli
Length = 340
Score = 71.1 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
+GLN QY+++I N R +GL+ F+ NP PW++ +
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL 339
>gi|218768312|ref|YP_002342824.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
meningitidis Z2491]
gi|121052320|emb|CAM08650.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
meningitidis Z2491]
gi|261392428|emb|CAX49973.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide
reductase) [Neisseria meningitidis 8013]
Length = 377
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++ + E Q + + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ +NP PW++ + + E ++
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLSSDNVQVAPQEVEIS 356
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 SYLIGQIDSEVNTD 370
>gi|3891570|pdb|2AV8|A Chain A, Y122f Mutant Of Ribonucleotide Reductase From Escherichia
Coli
gi|3891571|pdb|2AV8|B Chain B, Y122f Mutant Of Ribonucleotide Reductase From Escherichia
Coli
Length = 340
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 295
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
+GLN QY+++I N R +GL+ F+ NP PW++ +
Sbjct: 296 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL 339
>gi|7226528|gb|AAF41664.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
meningitidis MC58]
gi|254670476|emb|CBA06168.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
meningitidis alpha153]
Length = 384
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++ + E Q + + +A E +A
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ +NP PW++ + + E ++
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLSSDNVQVAPQEVEIS 363
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 364 SYLIGQIDSEVNTD 377
>gi|83754022|pdb|2ALX|A Chain A, Ribonucleotide Reductase R2 From Escherichia Coli In Space
Group P6(1)22
Length = 340
Score = 70.8 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 100
+GLN QY+++I N R +GL+ F+ NP PW++ +
Sbjct: 297 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL 340
>gi|319410557|emb|CBY90925.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide
reductase) [Neisseria meningitidis WUE 2594]
gi|325208250|gb|ADZ03702.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
meningitidis NZ-05/33]
Length = 384
Score = 70.8 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++ + E Q + + +A E +A
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ +NP PW++ + + E ++
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLSSDNVQVAPQEVEIS 363
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 364 SYLIGQIDSEVNTD 377
>gi|121635003|ref|YP_975248.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
meningitidis FAM18]
gi|120866709|emb|CAM10461.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
meningitidis FAM18]
gi|325128288|gb|EGC51172.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
meningitidis N1568]
gi|325130346|gb|EGC53112.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
meningitidis OX99.30304]
gi|325132508|gb|EGC55201.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
meningitidis M6190]
gi|325136206|gb|EGC58814.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
meningitidis M0579]
gi|325138282|gb|EGC60851.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
meningitidis ES14902]
gi|325142424|gb|EGC64828.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
meningitidis 961-5945]
gi|325198443|gb|ADY93899.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
meningitidis G2136]
gi|325201998|gb|ADY97452.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
meningitidis M01-240149]
Length = 377
Score = 70.8 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++ + E Q + + +A E +A
Sbjct: 237 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ +NP PW++ + + E ++
Sbjct: 297 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLSSDNVQVAPQEVEIS 356
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 SYLIGQIDSEVNTD 370
>gi|325268103|ref|ZP_08134749.1| ribonucleotide-diphosphate reductase beta subunit [Kingella
denitrificans ATCC 33394]
gi|324980488|gb|EGC16154.1| ribonucleotide-diphosphate reductase beta subunit [Kingella
denitrificans ATCC 33394]
Length = 384
Score = 70.8 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 7/122 (5%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ E ++ QQ+ + +A E +A
Sbjct: 244 RDEALHLTSTQHMLNLMRGGSEGTEWAQIAQDLQQECFDLFVKAAEQEKEWASYLFKDGS 303
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F T+NP PW++ + + E ++
Sbjct: 304 MIGLNKDILCQYVEYITNHRMLAVGLPVAFPKSTQNPIPWINAWLSSDNVQVAPQEVEIS 363
Query: 115 EY 116
Y
Sbjct: 364 SY 365
>gi|161870162|ref|YP_001599332.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
meningitidis 053442]
gi|161595715|gb|ABX73375.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
meningitidis 053442]
Length = 384
Score = 70.8 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++ + E Q + + +A E +A
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ +NP PW++ + + E ++
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLSSDNVQVAPQEVEIS 363
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 364 SYLIGQIDSEVNTD 377
>gi|254805092|ref|YP_003083313.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
meningitidis alpha14]
gi|254668634|emb|CBA06257.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
meningitidis alpha14]
Length = 384
Score = 70.8 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++ + E Q + + +A E +A
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ +NP PW++ + + E ++
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLSSDNVQVAPQEVEIS 363
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 364 SYLIGQIDSEVNTD 377
>gi|308389409|gb|ADO31729.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
meningitidis alpha710]
Length = 384
Score = 70.8 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++ + E Q + + +A E +A
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ +NP PW++ + + E ++
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLSSDNVQVAPQEVEIS 363
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 364 SYLIGQIDSEVNTD 377
>gi|254362523|ref|ZP_04978626.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
haemolytica PHL213]
gi|153094123|gb|EDN75022.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
haemolytica PHL213]
Length = 293
Score = 70.8 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
++E +H FGI + ++ E+ L+T EF + +T+ ++A E +
Sbjct: 162 KEEEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILDWIFEEGDLSFI 221
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
+ E Y++ N +GLEP W I KE +FF R T+Y
Sbjct: 222 TKATVENYIKNRYNNSLSILGLEPPHDIDPELLKETEWFDIEILSTKETDFFNKRSTDYS 281
Query: 118 Q 118
+
Sbjct: 282 K 282
>gi|238021387|ref|ZP_04601813.1| hypothetical protein GCWU000324_01286 [Kingella oralis ATCC 51147]
gi|237868367|gb|EEP69373.1| hypothetical protein GCWU000324_01286 [Kingella oralis ATCC 51147]
Length = 384
Score = 70.4 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 7/122 (5%)
Query: 2 RDESLHLNFGIDVINQIKIE----NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ E Q + + +A E +A
Sbjct: 244 RDEALHLTSTQHMLNLMRGGAEGAEWAEIAAELQNECFELFKKAAEQEKEWAEYLFKDGS 303
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL+P F+ T+NP PW++ + + E ++
Sbjct: 304 MIGLNKDILCQYVEYITNARMLAVGLQPAFEKATQNPIPWINTWLSSDNVQVAPQEVEIS 363
Query: 115 EY 116
Y
Sbjct: 364 SY 365
>gi|295698298|ref|YP_003602953.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
Riesia pediculicola USDA]
gi|291156973|gb|ADD79418.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
Riesia pediculicola USDA]
Length = 375
Score = 70.4 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LH+ +IN ++ E+ + +KE + + + E +A
Sbjct: 236 RDEALHVTGTQHMINIMQSSKEDKEMIEISKECLMICQKIFLNVSDQEKRWADYLFSNGN 295
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN ++Y+ +I R IGL+ NP PW++ + ++ ET V+
Sbjct: 296 LIGLNKKILKEYIDYITEVRMRAIGLKKDLIKKINPIPWINAWLSSDNIQSAPQETEVSS 355
Query: 116 YQQG 119
Y G
Sbjct: 356 YLVG 359
>gi|326336655|ref|ZP_08202823.1| ribonucleoside-diphosphate reductase [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325691125|gb|EGD33096.1| ribonucleoside-diphosphate reductase [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 319
Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 5/120 (4%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGLN 61
DE +H N GI ++ I ENP TK ++++ + E LLE
Sbjct: 190 DEQVHANAGIYILKTIFEENPEFRTKA-KEEATQFIREYILLEDKMLDWIFEEGELDFFT 248
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118
YM++ + Q+ L F T P W E + + + +FF R T Y +
Sbjct: 249 KKDLANYMRYRLDDALTQLDLGKPFGITAEEAKPMLWFEEEVFVNELDDFFAKRPTAYTK 308
>gi|261494146|ref|ZP_05990649.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
haemolytica serotype A2 str. BOVINE]
gi|261310312|gb|EEY11512.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
haemolytica serotype A2 str. BOVINE]
Length = 325
Score = 70.4 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
++E +H FGI + ++ E+ L+T EF + +T+ ++A E +
Sbjct: 194 KEEEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILDWIFEEGDLSFI 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
+ E Y++ N +GLEP W I KE +FF R T+Y
Sbjct: 254 TKATVENYIKNRYNNSLSILGLEPPHDIDPELLKETEWFDIEILSTKETDFFNKRSTDYS 313
Query: 118 Q 118
+
Sbjct: 314 K 314
>gi|291570484|dbj|BAI92756.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira
platensis NIES-39]
Length = 123
Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 8 LNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQ 67
+ +I + PH Q + M A E + + + +G+ S EQ
Sbjct: 1 MRLFQKIIPEAMAIFPH-----SQDRIYEMFDAAVQHECRWTNHIVGNNILGITEHSTEQ 55
Query: 68 YMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVTEYQQGA 120
Y +++AN R IGLE L+ KY ++P+ + D KK + NFFE VT Y +
Sbjct: 56 YTKYLANIRLRSIGLESLYSDPKYQKSPYTHLERFSDTKKEAHTKANFFEASVTSYVMSS 115
Query: 121 ELK-WD 125
+ WD
Sbjct: 116 GVSGWD 121
>gi|330004285|ref|ZP_08304843.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
MS 92-3]
gi|328536657|gb|EGF62979.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
MS 92-3]
Length = 380
Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLHEATLLEIAYAHETMPK-G 56
RDE+LH ++ ++ L K+ ++ + + E+ +A
Sbjct: 239 RDEALHCEGTERMLRNMRNGREGLLWKQIAEEEEPFVYQTMLDVAEQEMRWADYLFKDGS 298
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNF-FETRVT 114
+GLNA +QY+++ N ++ L PLF +P PWM+ + + ET +
Sbjct: 299 MIGLNAKILKQYVKYRTNLAMKRLHLNPLFDDVTFDPLPWMNSWLFTDNVQVAPQETEIP 358
Query: 115 EYQQG 119
Y G
Sbjct: 359 SYLVG 363
>gi|294661479|ref|YP_003579932.1| NrdB ribonucleotide reductase B subunit [Klebsiella phage KP15]
gi|292660640|gb|ADE34888.1| NrdB ribonucleotide reductase B subunit [Klebsiella phage KP15]
Length = 402
Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LH I + ++P + ++ ++++ + E E +A
Sbjct: 260 RDEALHQKGTQSKIRLWQMGKDDPEMVEISRRLKKEATAIFLEVYEQEKEWAEHLFSVGD 319
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
G++ S Y++ + ++R +GL+ F NP+PWM++ + + E V+
Sbjct: 320 VEGVSLKSTIAYIEHLTDQRMRAVGLDSPFTPIPNPYPWMNKWLKSDNVQVAPQEVEVSS 379
Query: 116 YQQG 119
Y G
Sbjct: 380 YLVG 383
>gi|94676795|ref|YP_588829.1| ribonucleotide-diphosphate reductase subunit beta [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
gi|94219945|gb|ABF14104.1| ribonucleoside-diphosphate reductase, beta subunit [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
Length = 376
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWTK--EFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++P + E Q S + A E +A
Sbjct: 237 RDEALHLAGTQHMLNLMRLGKDDPEMADIALECQHDSYHLFLXAANQEKDWASYLFRDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R + L+ F NP PW++ + + E V+
Sbjct: 297 MIGLNEEILCQYIEYITNIRMQAVLLDLPFATRSNPIPWINSWLVSDNVQVAPQEVEVSS 356
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 357 YLVGQINSEVNSD 369
>gi|238695114|ref|YP_002922308.1| aerobic NDP reductase small subunit [Enterobacteria phage JSE]
gi|220029250|gb|ACL78185.1| aerobic NDP reductase small subunit [Enterobacteria phage JSE]
Length = 388
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 46/111 (41%), Gaps = 5/111 (4%)
Query: 2 RDESLHLNFGIDVINQIK----IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE LHL +I Q + + +E + ++ + + E +
Sbjct: 248 RDEQLHLKGTQYIIRQWQTGVDGDEWKQIAEELEGEATKIFLDVVEQEKEWVDHLFAMGA 307
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
L+ + Y++++A+ R GL+ F +P PWM + ++ + +N
Sbjct: 308 IPNLSPEILKTYVEYLADSRMRAAGLKSPFSVRRHPLPWMRKWLNSDEVQN 358
>gi|228473186|ref|ZP_04057941.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
gingivalis ATCC 33624]
gi|228275336|gb|EEK14128.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
gingivalis ATCC 33624]
Length = 319
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGLN 61
DE +H N GI ++ I ENP TK ++++ + E LLE +
Sbjct: 190 DEQVHANAGIYILKTIFDENPEFRTKA-KKEATEFIREYILLEDKMLDWIFEEGELEFFS 248
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 118
YM++ + Q+ L F T P W E + + + +FF R T Y +
Sbjct: 249 KKDLANYMRYRLDDALTQLDLGKPFGITAEEAKPMLWFEEEVFVNELDDFFAKRPTAYTK 308
>gi|33620698|ref|NP_891801.1| aerobic NDP reductase small subunit [Enterobacteria phage RB49]
gi|33438568|gb|AAL15125.2| aerobic NDP reductase small subunit [Enterobacteria phage RB49]
Length = 386
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 46/111 (41%), Gaps = 5/111 (4%)
Query: 2 RDESLHLNFGIDVINQIK----IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE LHL +I Q + + +E + ++ + + E +
Sbjct: 246 RDEQLHLKGTQYIIRQWQTGVDGDEWKQIAEELEGEATKIFLDVVEQEKEWVDHLFAMGA 305
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
L+ + Y++++A+ R GL+ F +P PWM + ++ + +N
Sbjct: 306 IPNLSPEILKTYVEYLADSRMRAAGLKSPFSVRRHPLPWMRKWLNSDEVQN 356
>gi|294338336|emb|CBJ94375.1| Probable ribonucleotide reductase (small subunit) [Campylobacter
phage CPt10]
Length = 369
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 6/121 (4%)
Query: 2 RDESLHLNFGIDVINQI---KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGF 57
RDE+LHL ++I + E + EA E + F
Sbjct: 226 RDENLHLAITQNLIKILSRSPEEGFINAWNSIKDNITDRYLEAADQEFKWIDYLFSKGAF 285
Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+G+ + Y++++ N+R IG + +F + +NP PW+ I+ K + E+ +T
Sbjct: 286 LGMTPELAKNYIKYLINKRLKAIGFKEVFAGFNKNPIPWVETYINYDKNEVLPQESEITN 345
Query: 116 Y 116
Y
Sbjct: 346 Y 346
>gi|157311531|ref|YP_001469574.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
Phi1]
gi|149380735|gb|ABR24740.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
Phi1]
Length = 386
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 46/111 (41%), Gaps = 5/111 (4%)
Query: 2 RDESLHLNFGIDVINQIK----IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE LHL +I Q + + +E + ++ + + E +
Sbjct: 246 RDEQLHLKGTQYIIRQWQTGADGDEWKQIAEELEGEATKIFLDVVEQEKEWVDHLFAMGA 305
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 107
L+ + Y++++A+ R GL+ F +P PWM + ++ + +N
Sbjct: 306 IPNLSPEILKTYVEYLADSRMRAAGLKSPFSVRRHPLPWMRKWLNSDEVQN 356
>gi|294338139|emb|CBJ93977.1| Probable ribonucleotide reductase (small subunit) [Campylobacter
phage CP220]
Length = 369
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 6/121 (4%)
Query: 2 RDESLHLNFGIDVINQI---KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGF 57
RDE+LHL ++I + E + EA E + F
Sbjct: 226 RDENLHLAITQNLIKILSRSPEEGFINAWNSIKDNITDRYLEAADQEFKWIDYLFSKGAF 285
Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+G+ + Y++++ N+R IG + +F + +NP PW+ I+ K + E+ +T
Sbjct: 286 LGMTPELAKNYIKYLINKRLKAIGFKEVFAGFNKNPIPWVETYINYDKNEVLPQESEITN 345
Query: 116 Y 116
Y
Sbjct: 346 Y 346
>gi|156847976|ref|XP_001646871.1| hypothetical protein Kpol_2002p84 [Vanderwaltozyma polyspora DSM
70294]
gi|156117552|gb|EDO19013.1| hypothetical protein Kpol_2002p84 [Vanderwaltozyma polyspora DSM
70294]
Length = 351
Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 51/121 (42%), Gaps = 9/121 (7%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD LH++F + HL + + + ++ +A +E + +P V L
Sbjct: 220 LRDRGLHVDFCCLMY-------AHLKNQIDSEIVQKIIVDAVEIEKKSLLKALPIIKVNL 272
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120
Q+++++A+ G E + NP+ +M V+ L N + + Q+ +
Sbjct: 273 KIDEMNQFIEYVADSILVAFGNEKHYN-ATNPYEFMENVV-LPGNTNSLAKTIADAQKAS 330
Query: 121 E 121
E
Sbjct: 331 E 331
>gi|315930891|gb|EFV09876.1| ribonucleotide reductase, small chain family protein [Campylobacter
jejuni subsp. jejuni 305]
Length = 305
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 40/88 (45%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E P L+ E K M +A LEI + +G
Sbjct: 216 RDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFT 275
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT 89
E+Y+ ++ ++R I L+ L+
Sbjct: 276 DDIIEEYIHYLVDQRLSAINLDKLYNAK 303
>gi|51518029|ref|YP_067954.1| BaRF1 [Macacine herpesvirus 4]
gi|18025480|gb|AAK95424.1| BaRF1 [Macacine herpesvirus 4]
Length = 302
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 12/120 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH + N + + Q + + A +E A+ E G ++
Sbjct: 186 RDELLHTRAASLLYNSMTA----PADRPGAQWIQELFRTAVEVETAFI-EARGWGVTLVD 240
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ Q+++ A+R IGL PL+ + P +M+ + K+ NFFE +Y
Sbjct: 241 VQAIRQFLEATADRILGDIGLPPLYGTPPPRDCPLTYMTSI----KQTNFFEQESADYTM 296
>gi|21672460|ref|NP_660527.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
gi|25091143|sp|Q8K9W4|RIR2_BUCAP RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
AltName: Full=Ribonucleotide reductase small subunit
gi|21623075|gb|AAM67738.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
Length = 376
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTK----EFQQKSRTMLHEATLLEIAYAHETMPKGF 57
RDE+LHL ++N + E + K E ++++ + A+ E +A G
Sbjct: 237 RDEALHLTGTQHILNILNNEKNNENMKNTVLECREEAIKIFISASEQEKKWAKYLFQDGS 296
Query: 58 V-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+ GLN QY+++I N R H IG + F+ T NP PW++ ++ + ET ++
Sbjct: 297 MLGLNKDILCQYIEYITNIRMHAIGFKMPFEKTSNPIPWINSWLNSDYIQAAPQETEISS 356
Query: 116 YQQG 119
Y G
Sbjct: 357 YLVG 360
>gi|261599112|ref|YP_003257364.1| ribonucleotide-diphosphate reductase beta subunit [Blattabacterium
sp. (Periplaneta americana) str. BPLAN]
gi|261497769|gb|ACX84218.1| ribonucleotide-diphosphate reductase beta subunit [Blattabacterium
sp. (Periplaneta americana) str. BPLAN]
Length = 357
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG- 59
+RDESLH G + EN L + ++ + A E + + +
Sbjct: 192 VRDESLHSEAGCKIFRTFCEENKGLK-EIVERSVYHGVDLALKNEFVFIDKIFGGRDLCT 250
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEY 116
+ + +M+ AN + ++G + W I +++ +FF+ R T Y
Sbjct: 251 IKREELKNFMKDRANMKLRELGFFDSYHVDRRMLDNMNWFYITISGEQQTDFFDNRETGY 310
Query: 117 QQGAELKW 124
+ E W
Sbjct: 311 SKPNE-DW 317
>gi|304373620|ref|YP_003858365.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB16]
gi|299829576|gb|ADJ55369.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB16]
Length = 391
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWTKEFQ--QKSRTMLHEATLLEIAYAHETMP-KG 56
RDE+LH I + ++P + FQ +++ + E E +A
Sbjct: 249 RDEALHQKGTQSKIRLWQMGKDDPEMAEIAFQYEEEATQIFLEVYEQEKEWAEHLFSIGD 308
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
G++ S Y++ + ++R +GL+ FK + NP+PWM++ + + E V+
Sbjct: 309 VDGVSLKSTIAYIEHLTDQRMRAVGLQSPFKPSPNPYPWMNKWLKSDNVQVAPQEVEVSS 368
Query: 116 YQQG 119
Y G
Sbjct: 369 YLVG 372
>gi|37651592|ref|NP_932466.1| hypothetical protein 44RRORF111c [Aeromonas phage 44RR2.8t]
gi|66391913|ref|YP_238838.1| hypothetical protein PHG31p109 [Aeromonas phage 31]
gi|34732892|gb|AAQ81430.1| hypothetical protein 44RRORF111c [Aeromonas phage 44RR2.8t]
gi|62114750|gb|AAX63598.1| hypothetical protein PHG31p109 [Aeromonas phage 31]
Length = 323
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 9/128 (7%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
DE H G + + E ++ + M H+ E +
Sbjct: 192 DEHHHSIGGAMLFRTLCREMMEHHKVDVREKLKDDIIAMAHQVYDHESGIIDLVFAEPID 251
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKNFFETRVTEYQ 117
G+ A +++ N +G +P+F+ NP W I+ KK +FF +EY
Sbjct: 252 GITADELRIFVKSRINLCLENLGYDPIFEIESNPIASWFYRTINAKKFHDFFTGSGSEYN 311
Query: 118 QGAELKWD 125
+ WD
Sbjct: 312 ----INWD 315
>gi|330949820|gb|EGH50080.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae Cit 7]
Length = 359
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/69 (59%), Positives = 54/69 (78%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+HLNFGIDVINQIKIENPHLW E ++++ M+ + T LEI YA +TMP+G +G+
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWDAEMKKEATQMILQGTQLEIEYARDTMPRGVLGM 350
Query: 61 NAPSCEQYM 69
NA E Y+
Sbjct: 351 NAAMMEDYL 359
>gi|261496013|ref|ZP_05992423.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
haemolytica serotype A2 str. OVINE]
gi|261308263|gb|EEY09556.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
haemolytica serotype A2 str. OVINE]
Length = 325
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-KGFVGL 60
++E +H FGI + ++ E+ L+T EF + +T+ ++A E +
Sbjct: 194 KEEEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILDWIFEEGDLSFI 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
+ E Y++ N +GLEP W I KE +FF R T+Y
Sbjct: 254 TKATVENYIKNRYNNSLSILGLEPPHDIDPEFLKETEWFDIEILSTKETDFFNKRSTDYS 313
Query: 118 Q 118
+
Sbjct: 314 K 314
>gi|284504289|ref|YP_003407004.1| ribonucleotide reductase small chain [Marseillevirus]
gi|282935727|gb|ADB04042.1| ribonucleotide reductase small chain [Marseillevirus]
Length = 280
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
+DE+LH F V ++ + + Q++ + +L A + H+ + V ++
Sbjct: 153 KDEALHQRFAEAVYR-YIVDVIKAFPRVSQERVQEILGSAIDAVSPFIHDCLRFKNVNID 211
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAE 121
A YM+ A+ +G E F +M +I + + NFFE V +Y +G E
Sbjct: 212 AERMIGYMKNAADGLAFSLGYEKFFNSDS-SLDYML-LIGMDNKTNFFEEVVADYAKGLE 269
Query: 122 L 122
Sbjct: 270 G 270
>gi|66391516|ref|YP_239041.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB43]
gi|62288604|gb|AAX78587.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB43]
Length = 391
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMP-KG 56
RDE+LH I + ++P + ++++++ + E E +A
Sbjct: 249 RDEALHQKGTQSKIRLWQMGKDDPEMAEIAYQYEEEATQIFLEVYEQEKEWAEHLFSIGD 308
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
G+ S Y++ + ++R +GL+ FK + NP+PWM++ + + E V+
Sbjct: 309 VDGVTLKSTIAYIEHLTDQRMRAVGLQSPFKPSPNPYPWMNKWLKSDNVQVAPQEVEVSS 368
Query: 116 YQQG 119
Y G
Sbjct: 369 YLVG 372
>gi|209523562|ref|ZP_03272116.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira maxima
CS-328]
gi|209495967|gb|EDZ96268.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira maxima
CS-328]
Length = 112
Score = 68.1 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 28 KEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF- 86
Q + M A E + + + +G+ S EQY +++AN R IGLE L+
Sbjct: 5 PHSQDRIYEMFDAAVQHECRWTNHIVGNNILGITEHSTEQYTKYLANIRLRSIGLESLYS 64
Query: 87 --KYTENPFPWMSEVIDLKK----EKNFFETRVTEYQQGAELK-WD 125
KY ++P+ + D KK + NFFE VT Y + + WD
Sbjct: 65 DPKYQKSPYTHLERFSDTKKEAHTKANFFEASVTSYVMSSGVSGWD 110
>gi|193206379|ref|NP_500944.2| hypothetical protein F58F9.1 [Caenorhabditis elegans]
Length = 581
Score = 68.1 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 22 NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIG 81
N + K + + +++E+ L+E + E++P +G+N +Y++F+A+ ++G
Sbjct: 496 NELISRKPAESRITEIINESVLVEQDFVRESLPTNLIGMNQHMMCKYVEFVADLLLEELG 555
Query: 82 LEPLFKYTENPFPWMSEVIDLKKEKNFF 109
+ T+N F +M E I ++ + NFF
Sbjct: 556 YSKRYN-TKNLFDFM-ENISIEGKTNFF 581
>gi|168702485|ref|ZP_02734762.1| ribonucleotide-diphosphate reductase small chain [Gemmata
obscuriglobus UQM 2246]
Length = 70
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
GL+ Y ++ A+RR +G+ P+F T+NPF +M + D+++ NFFE RV+ Y
Sbjct: 1 MAGLSCRDLRSYPEYAADRRLESLGIAPVFG-TKNPFGFMD-LQDVQELTNFFERRVSAY 58
Query: 117 QQGAEL 122
Q G
Sbjct: 59 QLGVTG 64
>gi|319779630|ref|YP_004130543.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Taylorella equigenitalis MCE9]
gi|317109654|gb|ADU92400.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Taylorella equigenitalis MCE9]
Length = 377
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + E + + + A E A+A
Sbjct: 237 RDEALHLTSTQHMLNIMSSGADDPEMAHIASELKNQCFELFKSAAEQEKAWAEYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GLE F ++ NP PW++ + + E +T
Sbjct: 297 MIGLNKEILIQYVEYITNIRMSAVGLEEAFPQSKQNPIPWINTWLTSDNVQVAPQEVELT 356
Query: 115 EY---QQGAELKWD 125
Y Q + L D
Sbjct: 357 SYLVGQVDSNLDID 370
>gi|48696741|ref|YP_024565.1| ORF20 [Ostreid herpesvirus 1]
gi|81986458|sp|Q6R7K3|RIR2_OSHVF RecName: Full=Ribonucleoside-diphosphate reductase small chain
gi|41352405|gb|AAS00912.1| ORF20 [Ostreid herpesvirus 1]
Length = 579
Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 59/122 (48%), Gaps = 13/122 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+LH F +++ + + ++ +L EAT +E+ +A +P+G +
Sbjct: 256 RDETLHFRFYAELLRL-------MPDRPSDERIAELLTEATEIELEFAEYVVPEGVKYIT 308
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKKEKNFFETRVTEY 116
Q+++ N+ C + + P++ +P +M+ ++ +++ NFFE + TEY
Sbjct: 309 KDRLIQHVKANTNQVCEMLDINPIYFDQKGNVLLSPLLYMNT-LESEQKINFFEGKATEY 367
Query: 117 QQ 118
Sbjct: 368 NT 369
>gi|207108882|ref|ZP_03243044.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
pylori HPKX_438_CA4C1]
Length = 79
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 48 YAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-K 106
+GL + EQY+QF+A+ R ++G+ ++ ++P W+ ++
Sbjct: 1 MGDYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYGV-QHPIKWVESFSSFNEQRS 59
Query: 107 NFFETRVTEYQQGAELKWD 125
NFFE RV+ Y +G+ D
Sbjct: 60 NFFEARVSNYAKGSVSFDD 78
>gi|38639969|ref|NP_943924.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage Aeh1]
gi|33414658|gb|AAQ17701.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage Aeh1]
Length = 376
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 45/124 (36%), Gaps = 9/124 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSR----TMLHEATLLEIAYAHETMPK-G 56
RDE LHL +I + E ++ + E E +A + +
Sbjct: 234 RDEQLHLKGTQYLIRAWQNAEDDSEMYEIAKRLEHKAVQIFLEVAEQEKEWARDLLGNVT 293
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKN-FFETR 112
GL+ S Y+ ++ R GL + ++P PW+ + ++ + E
Sbjct: 294 IPGLSLSSMLDYIDYLTVSRMRSAGLPAPEELNIGMKHPLPWIRKWLNSDSVQVAAQEAE 353
Query: 113 VTEY 116
++ Y
Sbjct: 354 LSSY 357
>gi|312262463|gb|ADQ52758.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage PX29]
Length = 376
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 48/124 (38%), Gaps = 9/124 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE LHL +I + + + + K+ ++ E E +A + +
Sbjct: 234 RDEQLHLKGTQYLIRAWQNGDDDSEMVDIARRLESKAVSIFIEVAEQEKEWAKDLLGNVS 293
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKN-FFETR 112
GL+ Y+ ++ R +GL + ++P PW+ + ++ + E
Sbjct: 294 IPGLSLAEMIDYIDYLTGSRMRSVGLPVPDEVNVPIKHPLPWIRKWLNSDSVQVAAQEAE 353
Query: 113 VTEY 116
++ Y
Sbjct: 354 LSSY 357
>gi|45478633|ref|NP_995489.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
biovar Microtus str. 91001]
gi|52788092|ref|YP_093920.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis]
gi|145597234|ref|YP_001154698.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
Pestoides F]
gi|162417832|ref|YP_001604568.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
Angola]
gi|229896974|ref|ZP_04512133.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
[Yersinia pestis Pestoides A]
gi|45357286|gb|AAS58680.1| putative ribonucleoside-diphosphate reductase beta subunit
[Yersinia pestis biovar Microtus str. 91001]
gi|52538021|emb|CAG27446.1| putative ribonucleoside-diphosphate reductase beta subunit
[Yersinia pestis]
gi|145213002|gb|ABP42407.1| ribonucleoside-diphosphate reductase class Ia beta subunit
[Yersinia pestis Pestoides F]
gi|162350804|gb|ABX84753.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
Angola]
gi|229700010|gb|EEO88050.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
[Yersinia pestis Pestoides A]
Length = 380
Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLHEATLLEIAYAHETMPK-G 56
RDE+LH +I ++ L K + + + E+ +A
Sbjct: 239 RDEALHCEGTERMIRFMRTGREGLMWKMIAAEEESFIYQTMMDVAGQEMRWADYLFKDGS 298
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLNA + Y+++ N ++GL PLF ++P WM++ + + E +
Sbjct: 299 MIGLNADILKSYVKYRTNLAMRRLGLRPLFPEIKDDPLVWMNKWLLSDTLQIAPQEAEQS 358
Query: 115 EYQQG 119
Y G
Sbjct: 359 NYLVG 363
>gi|82503214|ref|YP_401656.1| BaRF1 [Human herpesvirus 4]
gi|139424488|ref|YP_001129453.1| BaRF1 [Human herpesvirus 4 type 2]
gi|238055355|sp|P0CAP6|RIR2_EBVB9 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase 38 kDa subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|238055356|sp|P0CAP7|RIR2_EBVA8 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase 38 kDa subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|238055357|sp|P0C701|RIR2_EBVG RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase 38 kDa subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|1334857|emb|CAA24843.1| unnamed protein product [Human herpesvirus 4]
gi|23893602|emb|CAD53406.1| ribonucleoside-diphosphate reductase small chain [Human herpesvirus
4]
gi|64173256|gb|AAY41106.1| unknown [Human herpesvirus 4]
gi|82703964|gb|ABB89233.1| BaRF1 [Human herpesvirus 4]
Length = 302
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 12/120 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH + N + + + + + A +E A+ E +G ++
Sbjct: 186 RDELLHTRAASLLYNSMTAK----ADRPRATWIQELFRTAVEVETAFI-EARGEGVTLVD 240
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+ +Q+++ A+R IG PL+ + P +M+ + K+ NFFE ++Y
Sbjct: 241 VRAIKQFLEATADRILGDIGQAPLYGTPPPKDCPLTYMTSI----KQTNFFEQESSDYTM 296
>gi|24943146|ref|NP_733908.1| ORF54 [Callitrichine herpesvirus 3]
gi|13676697|gb|AAK38263.1|AF319782_57 ORF54 [callitrichine herpesvirus 3]
Length = 302
Score = 65.4 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 45/120 (37%), Gaps = 12/120 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH + N + + + + + A +E + E +G ++
Sbjct: 186 RDELLHTTAATLLYNSMTSK----SERPQSEWIEALFRRAVDVEYNFI-EARGRGVTNID 240
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+++ A+R +G+ ++ + P +M+ K NFFE +EY
Sbjct: 241 LKGIRDFLEATADRILGDLGMTAIYDTRPPPDCPLTYMT----SVKHTNFFEQENSEYTM 296
>gi|330858746|ref|YP_004415121.1| putative ribonucleotide reductase B subunit [Shigella phage Shfl2]
gi|327397680|gb|AEA73182.1| putative ribonucleotide reductase B subunit [Shigella phage Shfl2]
Length = 389
Score = 65.4 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE LHL +I Q+++ + +E +Q++ + E E +A
Sbjct: 246 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 305
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FETRV 113
GLN S ++ ++ R Q GL ++P+PW+ E ++ ++ E +
Sbjct: 306 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLNSDNVQSAPQEVEL 365
Query: 114 TEY 116
+ Y
Sbjct: 366 SSY 368
>gi|30348565|emb|CAC84357.1| RRsmall [Saimiriine herpesvirus 2]
Length = 305
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 43/127 (33%), Gaps = 14/127 (11%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH + + N + + + + EA +E + G +N
Sbjct: 189 RDEMLHTSAAALLYNTMTK----SSERPSEDWIYKLFREAVEVEFKFIA-AKGHGVSLVN 243
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
Q++Q A+R I L P++ P K NFFE ++Y
Sbjct: 244 VHEIRQFLQATADRILESINLNPIYGSLPPENCPL----AYTSSTKSVNFFERDNSDYT- 298
Query: 119 GAELKWD 125
L D
Sbjct: 299 -GTLTND 304
>gi|299779174|ref|YP_003734368.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
IME08]
gi|298105903|gb|ADI55547.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
IME08]
Length = 389
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57
RDE LHL +I Q+++ + +E +Q++ + E E +A G
Sbjct: 246 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKEWATHLFKDGT 305
Query: 58 -VGLNAPSCEQYMQFIANRRCHQIGLE-PLFK-YTENPFPWMSEVIDLKKEKNF-FETRV 113
GLN + ++ ++ R Q GL P+ T +P+PW+ E ++ + E +
Sbjct: 306 CPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLNSDAVQAAPQEVEI 365
Query: 114 TEY 116
+ Y
Sbjct: 366 SSY 368
>gi|161622513|ref|YP_001595352.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
JS98]
gi|160213819|gb|ABX11158.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
JS98]
Length = 379
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57
RDE LHL +I Q+++ + +E +Q++ + E E +A G
Sbjct: 236 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKEWAAHLFKDGT 295
Query: 58 -VGLNAPSCEQYMQFIANRRCHQIGLE-PLFK-YTENPFPWMSEVIDLKKEKNF-FETRV 113
GLN + ++ ++ R Q GL P+ T +P+PW+ E ++ + E +
Sbjct: 296 CPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLNSDAVQAAPQEVEI 355
Query: 114 TEY 116
+ Y
Sbjct: 356 SSY 358
>gi|109290088|ref|YP_656337.1| hypothetical protein PHG25ORF102c [Aeromonas phage 25]
gi|104345761|gb|ABF72661.1| hypothetical protein PHG25ORF102c [Aeromonas phage 25]
Length = 332
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 5/121 (4%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFV 58
DE H G + + E + ++ + M + E +
Sbjct: 201 DEHHHSIGGAMLFQTLCREMKEKYGEDVRAKLKNDIINMARQVFDHESGIIDLVFAEPID 260
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKNFFETRVTEYQ 117
G+ A +++ N +G EP+F+ NP W I+ KK +FF +EY
Sbjct: 261 GITADELRVFVKSRINLCLENLGYEPIFEIENNPIADWFYRTINAKKFHDFFTGSGSEYN 320
Query: 118 Q 118
Sbjct: 321 I 321
>gi|116326446|ref|YP_803166.1| ribonucleotide reductase B subunit [Enterobacteria phage RB32]
gi|32709425|gb|AAP86731.1| NrdB [Enterobacteria phage RB32]
gi|115344039|gb|ABI95048.1| ribonucleotide reductase B subunit [Enterobacteria phage RB32]
Length = 392
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE LHL +I Q++ + +E +Q++ + E E +A
Sbjct: 249 RDEQLHLKGTQYIIRQLQSGTDGDEWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 308
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FETRV 113
GLN S ++ ++ R Q GL ++P+PW+ E ++ ++ E +
Sbjct: 309 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLNSDNVQSAPQEVEL 368
Query: 114 TEY 116
+ Y
Sbjct: 369 SSY 371
>gi|9626016|ref|NP_040262.1| ribonucleotide reductase, small subunit [Saimiriine herpesvirus 2]
gi|266917|sp|Q01038|RIR2_SHV21 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|66391|pir||WMBEP5 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain -
saimiriine herpesvirus 1 (strain 11)
gi|60381|emb|CAA45683.1| ribonucleotide reductase, small subunit [Saimiriine herpesvirus 2]
gi|330989|gb|AAA46136.1| ribonucleotide reductase small subunit [Saimiriine herpesvirus 2]
Length = 305
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 43/127 (33%), Gaps = 14/127 (11%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH + + N + + + + EA +E + G +N
Sbjct: 189 RDEMLHTSAAALLYNTMTK----SSERPSEDWIYKLFREAVEVEFKFIA-AKGYGVSLVN 243
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
Q++Q A+R I L P++ P K NFFE ++Y
Sbjct: 244 VHEIRQFLQATADRILESINLNPIYGSLPPENCPL----AYTSSTKSVNFFERDNSDYT- 298
Query: 119 GAELKWD 125
L D
Sbjct: 299 -GTLTND 304
>gi|238695377|ref|YP_002922570.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
JS10]
gi|220029513|gb|ACL78447.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
JS10]
Length = 379
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57
RDE LHL +I Q+++ + +E +Q++ + E E +A G
Sbjct: 236 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKEWAGHLFKDGT 295
Query: 58 -VGLNAPSCEQYMQFIANRRCHQIGLE-PLFK-YTENPFPWMSEVIDLKKEKNF-FETRV 113
GLN + ++ ++ R Q GL P+ T +P+PW+ E ++ + E +
Sbjct: 296 CPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLNSDAVQAAPQEVEI 355
Query: 114 TEY 116
+ Y
Sbjct: 356 SSY 358
>gi|228861159|ref|YP_002854182.1| ribonucleotide reductase B subunit [Enterobacteria phage RB51]
gi|227438833|gb|ACP31145.1| ribonucleotide reductase B subunit [Enterobacteria phage RB51]
Length = 392
Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE LHL +I Q+++ + KE +Q++ + E E +A
Sbjct: 249 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAKECEQEAVDIFMEVNRQEKDWAVHLFKDGD 308
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FETRV 113
GLN S ++ ++ R Q GL ++P+PW+ E ++ ++ E +
Sbjct: 309 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLNSDNVQSAPQEVEL 368
Query: 114 TEY 116
+ Y
Sbjct: 369 SSY 371
>gi|32709431|gb|AAP86734.1| NrdB [Enterobacteria phage T2H]
Length = 392
Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE LHL +I Q+++ + KE +Q++ + E E +A
Sbjct: 249 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAKECEQEAVDIFMEVNRQEKDWAVHLFKDGD 308
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FETRV 113
GLN S ++ ++ R Q GL ++P+PW+ E ++ ++ E +
Sbjct: 309 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLNSDNVQSAPQEVEL 368
Query: 114 TEY 116
+ Y
Sbjct: 369 SSY 371
>gi|9632793|ref|NP_049841.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage T4]
gi|1172940|sp|P11156|RIR2_BPT4 RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
AltName: Full=Protein B2; AltName: Full=Ribonucleotide
reductase
gi|5354417|gb|AAD42624.1|AF158101_211 NrdB aerobic NDP reductase, small subunit [Enterobacteria phage T4]
gi|15342|emb|CAA27757.1| small subunit B2 [Enterobacteria phage T4]
gi|299780589|gb|ADJ39951.1| aerobic NDP reductase small subunit [Enterobacteria phage T4T]
Length = 388
Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE LHL +I Q++ + +E +Q++ + E E +A
Sbjct: 245 RDEQLHLKGTQYIIRQLQSGTDGDEWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 304
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FETRV 113
GLN S ++ ++ R Q GL ++P+PW+ E ++ ++ E +
Sbjct: 305 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLNSDNVQSAPQEVEL 364
Query: 114 TEY 116
+ Y
Sbjct: 365 SSY 367
>gi|310722361|ref|YP_003969185.1| hypothetical protein phiAS4_ORF0167 [Aeromonas phage phiAS4]
gi|306021204|gb|ADM79739.1| hypothetical protein phiAS4_ORF0167 [Aeromonas phage phiAS4]
Length = 332
Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 5/121 (4%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFV 58
DE H G + + E + ++ + M ++ E +
Sbjct: 201 DEHHHSIGGAMLFQTLCREMKEKYGEDVRAKLKNDIINMAYQVFDHESGIIDLVFAEPID 260
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKNFFETRVTEYQ 117
G+ A +++ N +G EP+F+ NP W I+ KK +FF +EY
Sbjct: 261 GITADELRVFVKSRINLCLENLGYEPIFEIENNPIADWFYRTINAKKFHDFFTGSGSEYN 320
Query: 118 Q 118
Sbjct: 321 I 321
>gi|32709437|gb|AAP86737.1| NrdB [Enterobacteria phage TuIa]
Length = 391
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57
RDE LHL +I Q++ + KE +Q++ + E E +A G
Sbjct: 248 RDEQLHLKGTQYIIRQLQSGTDGDEWVQIAKECEQEAVDIFMEVNSQEKEWAAHLFKDGT 307
Query: 58 -VGLNAPSCEQYMQFIANRRCHQIGLE-PLFK-YTENPFPWMSEVIDLKKEKNF-FETRV 113
G+N S ++ ++ R Q GL P+ T++P+PW+ E ++ + E +
Sbjct: 308 CPGINTQSMCAFVDYLTVSRMKQCGLPCPITDAPTKHPYPWIREYLNSDLVQAAPQEVEI 367
Query: 114 TEY 116
+ Y
Sbjct: 368 SSY 370
>gi|258544274|ref|ZP_05704508.1| ribonucleoside-diphosphate reductase, beta subunit [Cardiobacterium
hominis ATCC 15826]
gi|258520512|gb|EEV89371.1| ribonucleoside-diphosphate reductase, beta subunit [Cardiobacterium
hominis ATCC 15826]
Length = 325
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF-VGL 60
++E +H FGI + I+ E+P L+T +F + + + + A E G +
Sbjct: 194 KEEEIHGRFGIALYGIIRDEHPRLFTPDFYDELQQLANHALEAERGILRWIFEDGDLDFI 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQ 117
+ E Y+ N +G+ + W I KE +FF R T+Y
Sbjct: 254 TLDTVENYITNRYNNSLEILGINAPYLVDTKKLRETEWFDIEILSGKEGDFFYKRSTDYS 313
Query: 118 Q 118
+
Sbjct: 314 K 314
>gi|310722637|ref|YP_003969460.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage phiAS5]
gi|306021480|gb|ADM80014.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage phiAS5]
Length = 376
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 52/127 (40%), Gaps = 9/127 (7%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMP-KG 56
RDE LHL I + ++P + K + K+ + +A E +A + +
Sbjct: 234 RDEQLHLKGTQYQIRTWQNGEDDPEMVDIAKRLESKAVQIFLDAAEQEKEWARDLLSRVS 293
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-FFETR 112
L+ S Y+ ++ R GL + +++P PW+ + ++ + + E
Sbjct: 294 IPSLSLQSMLDYIDYLTASRMQSAGLPIPEELNVPSKHPLPWIRKWLNSESVQVAAQEAE 353
Query: 113 VTEYQQG 119
++ Y G
Sbjct: 354 LSSYLVG 360
>gi|32709433|gb|AAP86735.1| NrdB [Enterobacteria phage U5]
Length = 391
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE LHL +I Q++ + +E +Q++ + E E +A
Sbjct: 248 RDEQLHLKGTQYIIRQLQSGTDGDEWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 307
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FETRV 113
GLN S ++ ++ R Q GL ++P+PW+ E ++ ++ E +
Sbjct: 308 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLNSDNVQSAPQEVEL 367
Query: 114 TEY 116
+ Y
Sbjct: 368 SSY 370
>gi|9631250|ref|NP_048031.1| small subunit of ribonucleotide reductase [Ateline herpesvirus 3]
gi|4019286|gb|AAC95584.1| small subunit of ribonucleotide reductase [Ateline herpesvirus 3]
Length = 305
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 43/126 (34%), Gaps = 13/126 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH + + N + + ++ + EA +E + G +N
Sbjct: 189 RDEMLHTSAAALLYNTMTK----PSERPPEKWIYELFREAVEVEFKFIS-AKVHGVSHVN 243
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
Q++Q A+R I L P++ P K NFFE ++Y
Sbjct: 244 VHEIRQFLQATADRILESINLNPIYHSVPPANCPL----VYTSSTKSVNFFERDNSDY-T 298
Query: 119 GAELKW 124
G
Sbjct: 299 GTVTND 304
>gi|320450283|ref|YP_004202379.1| ribonucleoside-diphosphate reductase subunit beta [Thermus
scotoductus SA-01]
gi|320150452|gb|ADW21830.1| ribonucleoside-diphosphate reductase, subunit beta [Thermus
scotoductus SA-01]
Length = 323
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 47/121 (38%), Gaps = 4/121 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGL 60
++E+LH FG++++ ++ E P L+ F +++ + E A +
Sbjct: 192 KEENLHGLFGVELLRILREERPDLFGPSFTEEALDRVEAFFRTEEALLEWIFARGDTEAV 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQ 117
+++++ N+ GL F + W + KE +FF R Y
Sbjct: 252 RGEEVLEFLKWRYNQVLALHGLPAPFPVRKECLRDTEWFDLELLADKEVDFFNKRSVAYA 311
Query: 118 Q 118
+
Sbjct: 312 R 312
>gi|282599256|ref|YP_003358568.1| NrdB ribonucleotide reductase subunit beta [Shigella phage
phiSboM-AG3]
gi|226973562|gb|ACO94315.1| NrdB ribonucleotide reductase subunit beta [Shigella phage
phiSboM-AG3]
Length = 367
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 5/123 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENP--HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV- 58
RDE HL ++N++ +P + +E + + M + E +A G +
Sbjct: 232 RDEQDHLILTQTLLNRLPGMDPDFEIIREELRGEMTQMFLDVGNQEKQWADYLFQDGSML 291
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEY 116
GLNA + ++ R IG P E P PW++E ++ K + E +Y
Sbjct: 292 GLNAKILHHMVDWLLTHRMGAIGHPYPGEPRKECPVPWINEWLNNKTMQYALQEAEAPDY 351
Query: 117 QQG 119
G
Sbjct: 352 LMG 354
>gi|18466786|ref|NP_569593.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|16506102|emb|CAD09988.1| putative ribonucleoside-diphosphate reductase beta subunit
[Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
Length = 380
Score = 63.4 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 49/125 (39%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLHEATLLEIAYAHETMPK-G 56
RDE+LH +I ++ L K + + + E+ +A
Sbjct: 239 RDEALHCEGTERMIRFMRTGREGLMWKMIAAEEESFIYQTMMDVAGQEMRWADYLFKDGS 298
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLNA + Y+++ N ++GL LF ++P WM++ + + E +
Sbjct: 299 MIGLNADILKSYVKYRTNLAMRRLGLRQLFPEIKDDPLVWMNKWLLSDTLQIAPQEAEQS 358
Query: 115 EYQQG 119
Y G
Sbjct: 359 NYLVG 363
>gi|167957419|ref|ZP_02544493.1| ribonucleotide-diphosphate reductase subunit beta [candidate
division TM7 single-cell isolate TM7c]
Length = 277
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE+LHL FGI+++ I ENP L EF + R ++ +A LE AY + +P G +GLN
Sbjct: 212 RDENLHLEFGINLLLTILHENPDLQDPEFADEIRNLILQAVELEEAYNRDMLPNGILGLN 271
Query: 62 APSCEQ 67
A Q
Sbjct: 272 ADYVNQ 277
>gi|228861541|ref|YP_002854562.1| ribonucleotide reductase B subunit [Enterobacteria phage RB14]
gi|227438557|gb|ACP30870.1| ribonucleotide reductase B subunit [Enterobacteria phage RB14]
Length = 392
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE LHL +I Q++ + +E +Q++ + E E +A
Sbjct: 249 RDEQLHLKGTQYIIRQLQSGTDGDQWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 308
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FETRV 113
GLN S ++ ++ R Q GL ++P+PW+ E ++ ++ E +
Sbjct: 309 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLNSDNVQSAPQEVEL 368
Query: 114 TEY 116
+ Y
Sbjct: 369 SSY 371
>gi|291290450|dbj|BAI83245.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
AR1]
Length = 392
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE LHL +I Q++ + +E +Q++ + E E +A
Sbjct: 249 RDEQLHLKGTQYIIRQLQSGTDGDQWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 308
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FETRV 113
GLN S ++ ++ R Q GL ++P+PW+ E ++ ++ E +
Sbjct: 309 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLNSDNVQSAPQEVEL 368
Query: 114 TEY 116
+ Y
Sbjct: 369 SSY 371
>gi|32709423|gb|AAP86730.1| NrdB [Enterobacteria phage RB27]
Length = 392
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE LHL +I Q++ + +E +Q++ + E E +A
Sbjct: 249 RDEQLHLKGTQYIIRQLQSGTDGDQWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKDGD 308
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEKNF-FETRV 113
GLN S ++ ++ R Q GL ++P+PW+ E ++ ++ E +
Sbjct: 309 VPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLNSDNVQSAPQEVEL 368
Query: 114 TEY 116
+ Y
Sbjct: 369 SSY 371
>gi|311993225|ref|YP_004010091.1| aerobic NDP reductase, small subunit [Enterobacteria phage CC31]
gi|284178063|gb|ADB81729.1| aerobic NDP reductase, small subunit [Enterobacteria phage CC31]
Length = 379
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHE-TMPKG 56
RDE LHL +I Q+++ E +E +Q++ + E E +A G
Sbjct: 236 RDEQLHLKGTQYIIRQLQLGTDGEEWVQIARECEQEAVDIFMEINRQEKEWAVHLWRDGG 295
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE--NPFPWMSEVIDLKKEKNF-FETRV 113
GL+ ++ ++ R GL +P PW+ E ++ ++ E +
Sbjct: 296 VPGLSVKILHDFIDYLTVSRMRSCGLPCPITDAPVRHPIPWIREYLNSDAVQSAPQEVEI 355
Query: 114 TEY 116
+ Y
Sbjct: 356 SSY 358
>gi|326804582|ref|YP_004327453.1| Ribonucleotide-diphosphate reductase beta subunit [Salmonella phage
Vi01]
gi|301795232|emb|CBW37950.1| Ribonucleotide-diphosphate reductase beta subunit [Salmonella phage
Vi01]
Length = 367
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
Query: 2 RDESLHLNFGIDVINQIKIENPH--LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV- 58
RDE HL +N++ + +P + +E + + M + E +A+ G +
Sbjct: 232 RDEQDHLILTQTFLNRLPLLDPDFGIIREELRGEMTQMYVDVVNQEKEWANYLFKDGSML 291
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEY 116
GLNA Q + ++A R IG P +NP PW++E +D K + E +Y
Sbjct: 292 GLNANILHQMVDWLATHRMGAIGHPYPGQARKDNPVPWINEWLDNKTMQYALQEAEAPDY 351
Query: 117 QQG 119
G
Sbjct: 352 LTG 354
>gi|190896442|gb|ACE96734.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896490|gb|ACE96758.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 213
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ EA +E + +++P VG+N
Sbjct: 152 RDEGLHCDFACLLYSLLRKKLSE-------ERVKGIVKEAVEIEREFVVDSLPCALVGMN 204
Query: 62 APSCEQYMQ 70
QY++
Sbjct: 205 GELMSQYIE 213
>gi|190896432|gb|ACE96729.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896434|gb|ACE96730.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896436|gb|ACE96731.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896438|gb|ACE96732.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896440|gb|ACE96733.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896444|gb|ACE96735.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896446|gb|ACE96736.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896448|gb|ACE96737.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896450|gb|ACE96738.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896452|gb|ACE96739.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896454|gb|ACE96740.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896456|gb|ACE96741.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896458|gb|ACE96742.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896460|gb|ACE96743.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896462|gb|ACE96744.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896464|gb|ACE96745.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896466|gb|ACE96746.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896468|gb|ACE96747.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896470|gb|ACE96748.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896472|gb|ACE96749.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896474|gb|ACE96750.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896476|gb|ACE96751.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896478|gb|ACE96752.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896482|gb|ACE96754.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896484|gb|ACE96755.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896486|gb|ACE96756.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896488|gb|ACE96757.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896492|gb|ACE96759.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896494|gb|ACE96760.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896496|gb|ACE96761.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896498|gb|ACE96762.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896500|gb|ACE96763.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896502|gb|ACE96764.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896504|gb|ACE96765.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896506|gb|ACE96766.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 213
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ EA +E + +++P VG+N
Sbjct: 152 RDEGLHCDFACLLYSLLRKKLSE-------ERVKGIVKEAVEIEREFVVDSLPCALVGMN 204
Query: 62 APSCEQYMQ 70
QY++
Sbjct: 205 GELMSQYIE 213
>gi|190896480|gb|ACE96753.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 213
Score = 61.1 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + + ++ + ++ + ++ EA +E + +++P VG+N
Sbjct: 152 RDEGLHCDFACLLYSLLRKKLGE-------ERVKGIVKEAVEIEREFVVDSLPCALVGMN 204
Query: 62 APSCEQYMQ 70
QY++
Sbjct: 205 GELMSQYIE 213
>gi|293411957|ref|ZP_06654682.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
gi|309797907|ref|ZP_07692288.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 145-7]
gi|220980068|emb|CAP72260.1| Ribonucleoside-diphosphate reductase subunit beta [Escherichia coli
LF82]
gi|291469512|gb|EFF12001.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
gi|308118515|gb|EFO55777.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 145-7]
gi|323934216|gb|EGB30640.1| ribonucleotide reductase [Escherichia coli E1520]
Length = 380
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 7/125 (5%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLHEATLLEIAYAHETMPK-G 56
RDE+LH +I ++ L KE + E+ +A
Sbjct: 239 RDEALHCEGTERMIRFMRTGREGLLWKEIAADEENVIYDTMKSVAEQEMNWADYLFKDGS 298
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLNA + Y+++ N +++GL+ LF T +P WM++ + + E +
Sbjct: 299 MIGLNADILKTYVKYRTNLAMNRLGLKALFPEVTTDPLVWMNKWLLTDTLQIAPQEAEQS 358
Query: 115 EYQQG 119
Y G
Sbjct: 359 TYLVG 363
>gi|121730673|ref|ZP_01682814.1| ATP-dependent Zn proteases [Vibrio cholerae V52]
gi|121627739|gb|EAX60372.1| ATP-dependent Zn proteases [Vibrio cholerae V52]
Length = 129
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Query: 11 GIDVINQIKIENPHLWT-KEFQQKSRTMLHEATLLEIAYAHETMPK-GFVGLNAPSCEQY 68
++++ + L +E +Q+S + EA E +A +GLN QY
Sbjct: 1 MLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGSMIGLNKDILCQY 60
Query: 69 MQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVTEYQQG 119
+++I N R +GLEP + T NP PW++ + + E ++ Y G
Sbjct: 61 VEYITNIRMQAVGLEPAYPAATNNPIPWINAWLSSDNVQVAPQEAEISSYLVG 113
>gi|302321458|gb|ADL16651.1| RNR2 [Abalone herpesvirus Victoria/AUS/2007]
Length = 642
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 15/124 (12%)
Query: 1 MR-DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
+R DE+LH +F + N + + +K + ++ +A +EIA+A + +
Sbjct: 246 VRNDETLHGSFYAALHNI-------MPDRASPEKVKEIIVKAVEIEIAFAMSIVTEDLEH 298
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYT------ENPFPWMSEVIDLKKEKNFFETRV 113
+N S + +++ AN C +G+EP++ +P +M+ L+K NFFE R
Sbjct: 299 INPSSMQLHIKATANLCCEFLGVEPIYFDRWTKLPVVSPLSYMNNYETLQKF-NFFEVRN 357
Query: 114 TEYQ 117
+Y
Sbjct: 358 MDYS 361
>gi|9628063|ref|NP_042657.1| ribonucleotide reductase, small subunit [Equid herpesvirus 2]
gi|82013696|sp|Q66662|RIR2_EHV2 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|695233|gb|AAC13848.1| ribonucleotide reductase, small subunit [Equid herpesvirus 2]
Length = 305
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 42/121 (34%), Gaps = 12/121 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE +H + N + + K + + EA +E + +G +N
Sbjct: 189 RDEWVHTRAAALLFNTLVPDE----EKPSPEWIGALFREAVEVEYNFIL-AKGRGVSHVN 243
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
++++ A+R I + P++ P K NFFE ++Y
Sbjct: 244 VADINRFLEATADRILKSINVGPVYGTQPPPNCPL----VYTGCLKNVNFFERESSDYTT 299
Query: 119 G 119
Sbjct: 300 A 300
>gi|254976540|ref|ZP_05273012.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
difficile QCD-66c26]
gi|255093925|ref|ZP_05323403.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
difficile CIP 107932]
gi|255315677|ref|ZP_05357260.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
difficile QCD-76w55]
gi|255518338|ref|ZP_05386014.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
difficile QCD-97b34]
gi|255651455|ref|ZP_05398357.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
difficile QCD-37x79]
gi|260684515|ref|YP_003215800.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
difficile CD196]
gi|260688173|ref|YP_003219307.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
difficile R20291]
gi|260210678|emb|CBA65434.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
difficile CD196]
gi|260214190|emb|CBE06438.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
difficile R20291]
Length = 323
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH + + +I + K ++K ++L+ EI Y + GL
Sbjct: 196 LRDESLHGKYIGLLAQEIYDSFDKMDKKMLEEKMYSILYSLMENEIEYTNVIY--RESGL 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
++++ ANR +G E L+ NP + + + + +FF T+ YQ+
Sbjct: 254 EKEVV-NFLKYNANRALENLGFEKLYTVDAINPI--VLNGLSTETKTHDFFSTKGNGYQK 310
Query: 119 G 119
G
Sbjct: 311 G 311
>gi|18653874|ref|NP_570808.1| small ribonucleotide reductase [Macacine herpesvirus 5]
gi|4494972|gb|AAD21394.1| small ribonucleotide reductase [Macaca mulatta rhadinovirus 17577]
Length = 314
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 13/121 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH + N + + + EA +E + + + +N
Sbjct: 199 RDELLHTRAASLLYNTMISRD----ESPSVAYIHGLFREAVEIETLFIR-SKSRDVTMVN 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
EQ++Q A+R I + PLF P + S K NFFE +EY
Sbjct: 254 VGDIEQFLQATADRILKSINIPPLFGARPPNACPLSYTSA-----KSVNFFERDNSEYVT 308
Query: 119 G 119
Sbjct: 309 S 309
>gi|83642896|ref|YP_438184.1| ORF60 [Ovine herpesvirus 2]
gi|61971010|gb|AAX58095.1| ORF60 [Ovine herpesvirus 2]
gi|78127895|gb|ABB22279.1| ribonucleotide-reductase small subunit-like protein [Ovine
herpesvirus 2]
Length = 305
Score = 60.7 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 40/120 (33%), Gaps = 12/120 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH + N + + K + + EA +E + +N
Sbjct: 189 RDELLHTRAAALLYNTVIPQEG----KPSEAWIIDLFKEAVSIEDEFIR-AKSGEVGFVN 243
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
++++ A+R + IGL F P K +FFE TEY
Sbjct: 244 VADIRRFLEATADRLLNSIGLPVHFKSEPPKSCPL----TYTGCIKNVSFFERESTEYST 299
>gi|7330057|gb|AAF60046.1|AF210726_67 small ribonuclease reductase [Rhesus monkey rhadinovirus H26-95]
Length = 304
Score = 60.4 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 13/121 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH + N + + + EA +E + + + +N
Sbjct: 189 RDELLHTRAASLLYNTMISRD----ESPSVAYIHGLFREAVEIETLFIR-SKSRDVTMVN 243
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
EQ++Q A+R I + PLF P + S K NFFE +EY
Sbjct: 244 VGDIEQFLQATADRILKSINIPPLFGARPPNACPLSYTSA-----KSVNFFERDNSEYVT 298
Query: 119 G 119
Sbjct: 299 S 299
>gi|46519447|gb|AAT00095.1| JM118 [Macaca fuscata rhadinovirus]
Length = 314
Score = 60.4 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 44/121 (36%), Gaps = 13/121 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH + N + + + EA +E + + +G +N
Sbjct: 199 RDELLHTRAAGLLYNTMISRD----ESPSVAYIHGLFREAVEIETLFIR-SKSRGVTMVN 253
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
EQ++Q A+R I + PLF P + S K NFFE +EY
Sbjct: 254 VGDIEQFLQATADRILKSINVPPLFGARPPNACPLSYTSA-----KSVNFFERDNSEYVT 308
Query: 119 G 119
Sbjct: 309 S 309
>gi|225619347|ref|YP_002720573.1| ribonucleoside-diphosphate reductase subunit beta [Brachyspira
hyodysenteriae WA1]
gi|225214166|gb|ACN82900.1| ribonucleoside-diphosphate reductase, beta subunit [Brachyspira
hyodysenteriae WA1]
Length = 356
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 9/131 (6%)
Query: 3 DE-SLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLLEIAYAHETMPKG 56
DE + H+ G +V+N ++ EN +T F + +R M EI +A
Sbjct: 225 DELNTHVPTGKNVMNILRKENEQGFTHLFKSGWFNETARAMAEFTVNEEIKWAKYLFDGY 284
Query: 57 FV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNF-FETRV 113
V G+N+ E ++++ A R +G+E + + + W + D+ K+ ET
Sbjct: 285 QVAGINSSVSEHFIKYWAGVRLRDLGVESPYNEKKSDVIDWFNSYRDINKQNAALQETTN 344
Query: 114 TEYQQGAELKW 124
T YQ+GA
Sbjct: 345 TSYQKGALKND 355
>gi|126700615|ref|YP_001089512.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
difficile 630]
gi|255102106|ref|ZP_05331083.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
difficile QCD-63q42]
gi|255307975|ref|ZP_05352146.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
difficile ATCC 43255]
gi|115252052|emb|CAJ69888.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
reductase small subunit) [Clostridium difficile]
Length = 323
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH + + +I + + ++K ++L+ EI Y + GL
Sbjct: 196 LRDESLHGKYIGLLAQEIYDSFDKMDKEMLEEKMYSILYSLMENEIEYTNVIY--RESGL 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
++++ ANR +G E L+ NP + + + + +FF T+ YQ+
Sbjct: 254 EKEVV-NFLKYNANRALENLGFEKLYTVDAINPI--VLNGLSTETKTHDFFSTKGNGYQK 310
Query: 119 G 119
G
Sbjct: 311 G 311
>gi|321496611|ref|YP_004207896.1| ribonucleotide reductase small subunit [Rodent herpesvirus Peru]
gi|320332513|gb|ADW24401.1| ribonucleotide reductase small subunit [Rodent herpesvirus Peru]
gi|320332596|gb|ADW24483.1| ribonucleotide reductase small subunit [Rodent herpesvirus Peru]
Length = 307
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 44/126 (34%), Gaps = 13/126 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH + N + K + EA +EI + E +G +N
Sbjct: 191 RDELLHTRAAALLYNTLV----DPDRKPPVHWIHNLFREAVDVEIRFIRE-RGRGVTAVN 245
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+++ A+R QI L L+ + P + K NFFE T+Y
Sbjct: 246 IEDIISFLKATADRMLTQIKLPILYGELAPSGCPLAF----NACVKNINFFEREGTDYS- 300
Query: 119 GAELKW 124
+
Sbjct: 301 SSVTND 306
>gi|254672337|emb|CBA05511.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
meningitidis alpha275]
Length = 345
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N ++ ++ + E Q + + +A E +A
Sbjct: 244 RDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQEKEWAAYLFKDGS 303
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 97
+GLN QY+++I N R +GL F+ +NP PW++
Sbjct: 304 MIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345
>gi|255656920|ref|ZP_05402329.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
difficile QCD-23m63]
gi|296452239|ref|ZP_06893946.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
difficile NAP08]
gi|296877591|ref|ZP_06901622.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
difficile NAP07]
gi|296258926|gb|EFH05814.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
difficile NAP08]
gi|296431442|gb|EFH17258.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
difficile NAP07]
Length = 323
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH + + +I + + ++K ++L+ EI Y + GL
Sbjct: 196 LRDESLHGKYIGLLAQEIYDSFDKMDKEILEEKMYSILYRLMENEIEYTNIIY--RESGL 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
++++ ANR +G E L+ NP + + + + +FF T+ YQ+
Sbjct: 254 EKEVV-NFLKYNANRALENLGFEKLYTVDAINPI--VLNGLSTETKTHDFFSTKGNGYQK 310
Query: 119 G 119
G
Sbjct: 311 G 311
>gi|117530173|ref|YP_851016.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis
phage Ma-LMM01]
gi|86990305|dbj|BAE79256.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis
phage Ma-LMM01]
gi|117165785|dbj|BAF36093.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis
phage Ma-LMM01]
gi|124270949|dbj|BAF45776.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage
Ma-LMM02]
gi|124270951|dbj|BAF45777.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage
Ma-LMM03]
gi|124270953|dbj|BAF45778.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage
Ma-HPM05]
Length = 348
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 12/118 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++I E +W + + +A EI + + G G+N
Sbjct: 218 RDEQTHLKLISNIIRTGLAEGTLMWD---TDEIIDLFRKAAEYEIEWGLH-IGLGVNGIN 273
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKE-----KNFFET 111
A + EQY +++ N R IGL +F+ Y+ NP+ + E NFFE+
Sbjct: 274 ATTIEQYAKYLCNIRARAIGLPTVFEGRQYSRNPYAHLERFAATTGEDSITRDNFFES 331
>gi|314121808|ref|YP_004063927.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
vB_EcoM-VR7]
gi|313151565|gb|ADR32621.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
vB_EcoM-VR7]
Length = 392
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIK----IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57
RDE LHL ++ Q++ + E + ++ + E E +A G
Sbjct: 249 RDEQLHLKGTQYILRQLQTGVDGDEWVKIAHECEAEAAAIFMEVNRQEKEWAVHLFKDGG 308
Query: 58 -VGLNAPSCEQYMQFIANRRCHQIGLEP--LFKYTENPFPWMSEVIDLKKEKNF-FETRV 113
GL+ +++ ++ R Q GL + + T++P PW+ E ++ ++ E +
Sbjct: 309 LPGLSVEILNRFIDYLTVSRMKQCGLPCEIVLESTKHPIPWIREYLNSDNVQSAPQEVEL 368
Query: 114 TEY 116
+ Y
Sbjct: 369 SAY 371
>gi|148688625|gb|EDL20572.1| mCG1032193 [Mus musculus]
Length = 150
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K +Q+ + ++ A +E + E +P +G++
Sbjct: 65 RDEGLHWDFACLMFK-------HLAHKPSEQRVKEIITTAVRIEQEFLTEALPVKLIGMS 117
Query: 62 APSCEQYM 69
+QY+
Sbjct: 118 CTLMKQYI 125
>gi|308814593|ref|YP_003934867.1| ribonucleotide reductase B subunit [Shigella phage SP18]
gi|308206185|gb|ADO19584.1| ribonucleotide reductase B subunit [Shigella phage SP18]
Length = 392
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIK----IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 57
RDE LHL ++ Q++ + E + ++ + E E +A G
Sbjct: 249 RDEQLHLKGTQYILRQLQTGVDGDEWVKIAHECEAEAAAIFMEVNRQEKEWAVHLFKDGG 308
Query: 58 -VGLNAPSCEQYMQFIANRRCHQIGLEP--LFKYTENPFPWMSEVIDLKKEKNF-FETRV 113
GL+ +++ ++ R Q GL + + T++P PW+ E ++ ++ E +
Sbjct: 309 LPGLSVEILNRFIDYLTVSRMKQCGLPCEIVLESTKHPIPWIREYLNSDNVQSAPQEVEL 368
Query: 114 TEY 116
+ Y
Sbjct: 369 SAY 371
>gi|46255232|ref|YP_006144.1| ribonucleoside-diphosphate reductase beta chain [Thermus
thermophilus HB27]
gi|46198081|gb|AAS82491.1| ribonucleoside-diphosphate reductase beta chain [Thermus
thermophilus HB27]
Length = 324
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 50/123 (40%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
++E++H FG++++ ++ E+P + FQ+++ + E A G L
Sbjct: 193 KEENVHGLFGVELLRLLRTEHPEALGEGFQEEALRLAQGLFRAEEALLDWLFSAGEPALV 252
Query: 62 APSCEQYMQFIANRR---CHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTE 115
+ ++F+ R GL P F E W + + KE +FF R
Sbjct: 253 --GHRETLEFLKGRYNQVLALHGLPPPFPVDEKALRDTEWFTLELLADKEVDFFNKRSVA 310
Query: 116 YQQ 118
Y +
Sbjct: 311 YAR 313
>gi|311992967|ref|YP_004009834.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage
Acj61]
gi|295815256|gb|ADG36182.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage
Acj61]
Length = 377
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETMP-KG 56
RDE+LH +I +++ E P +E ++++ + E +
Sbjct: 232 RDENLHHQGTRYMIKRLQSGEEGPEWIKIAEECREEATNIFLATNEQEKEWCKYVYQSGA 291
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLE--PLFKYTENPFPWMSEVIDLKKEKNF-FETRV 113
GL+ Y+ + R +++GL+ + NPFPW+++ + + E +
Sbjct: 292 PQGLSVGLVSDYIDYATVPRMNELGLDSSSIVAPKRNPFPWLTKFLKSNTVQAAPQEVEI 351
Query: 114 TEY 116
Y
Sbjct: 352 GSY 354
>gi|10140982|ref|NP_065559.1| ribonucleotide-reductase, small subunit [Alcelaphine herpesvirus 1]
gi|81984051|sp|O36410|RIR2_ALHV1 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|2338023|gb|AAC58107.1| ribonucleotide-reductase, small subunit [Alcelaphine herpesvirus 1]
Length = 305
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 12/119 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH + N + + + + ++ EA +E A+ E K ++
Sbjct: 189 RDELLHTRAAALLYNTMIPKE----ERPSSEWVVSLFKEAVEIECAFI-EAKTKQVTFVS 243
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+++ A+R + I L + P K +FFE TEY
Sbjct: 244 MDDIRAFLEATADRLLNSIELPRYYKSDPPQSCPL----TYTGCIKNVSFFERESTEYS 298
>gi|219681363|ref|YP_002456127.1| putative ribonucleoside diphosphate reductase beta chain [Erwinia
phage phiEa21-4]
gi|327198492|ref|YP_004327080.1| ribonucleoside diphosphate reductase beta chain [Erwinia phage
phiEa104]
gi|199580630|gb|ACH89017.1| putative ribonucleoside diphosphate reductase beta chain [Erwinia
phage phiEa21-4]
gi|311875188|emb|CBX44448.1| ribonucleoside diphosphate reductase beta chain [Erwinia phage
phiEa104]
Length = 365
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 56/131 (42%), Gaps = 11/131 (8%)
Query: 3 DESLH--LNFGIDVINQIKIENPHLWT--KEFQQKSRTMLHEATLLEIAYAHETM--PKG 56
DE LH ++F I +++P + + + + +L E E +A +
Sbjct: 229 DEILHSKMDFAAL---DILLKDPVWFQSYQNCKGDVQRILDEVMENESNWADYIFSEGRS 285
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNF-FETRVT 114
VGLN ++++ + A + L+ + +NP P+M + +++ ++N E +
Sbjct: 286 VVGLNPTLLKEWVYYSAKPLYDFLNLDYNYPVVVKNPLPYMDKWMNIDSQQNANQEQDNS 345
Query: 115 EYQQGAELKWD 125
+Y + D
Sbjct: 346 QYLLNTMVNDD 356
>gi|90018206|gb|ABD83916.1| ribonucleotide reductase M2 polypeptide [Ictalurus punctatus]
Length = 139
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + HL K + ++++ A +E + + +P +G+N
Sbjct: 81 RDEGLHCDFACLMFK-------HLVNKPSEATVKSIIVNAVQIEQEFLTQALPVKLIGMN 133
Query: 62 APSCEQ 67
+Q
Sbjct: 134 CDLMKQ 139
>gi|164688728|ref|ZP_02212756.1| hypothetical protein CLOBAR_02375 [Clostridium bartlettii DSM
16795]
gi|164602204|gb|EDQ95669.1| hypothetical protein CLOBAR_02375 [Clostridium bartlettii DSM
16795]
Length = 327
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 7/121 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH + + +I + KE++ K + EI Y + +
Sbjct: 196 LRDESLHGKYIGLLAQEIFKDFSKEEQKEYKSKVMDVFDRLMENEINYTNTIYEGTGL-- 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
A ++++ ANR +G + L NP + + + + +FF T+ YQ+
Sbjct: 254 -ADEVINFLKYNANRAMENLGYDNRLEVDPVNPI--VLNGLSTETKTHDFFSTKGNGYQK 310
Query: 119 G 119
G
Sbjct: 311 G 311
>gi|152974880|ref|YP_001374397.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
subsp. cytotoxis NVH 391-98]
gi|152023632|gb|ABS21402.1| Ribonucleoside-diphosphate reductase [Bacillus cytotoxicus NVH
391-98]
Length = 322
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E ++ Q++++ +L E +E AY E +GL
Sbjct: 192 IRDESIHGVFVGLLAQQIFAELSAEEQEDVQKETQDLLMELYEIETAYTEEIY--ASIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 VGE-VNRFVRYNANKGLMNLGLEPRFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 A---ELKWD 125
+L D
Sbjct: 308 TNVEKLSDD 316
>gi|47566242|ref|ZP_00237270.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
G9241]
gi|47556795|gb|EAL15126.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
G9241]
Length = 322
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 A---ELKWD 125
+L D
Sbjct: 308 TNVEKLSDD 316
>gi|228990454|ref|ZP_04150419.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
pseudomycoides DSM 12442]
gi|228996556|ref|ZP_04156195.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
Rock3-17]
gi|229004206|ref|ZP_04162007.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
Rock1-4]
gi|228757067|gb|EEM06311.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
Rock1-4]
gi|228763188|gb|EEM12096.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
Rock3-17]
gi|228768980|gb|EEM17578.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
pseudomycoides DSM 12442]
Length = 322
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAEFSAEEQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPRFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 A---ELKWD 125
+L D
Sbjct: 308 TNVEKLSDD 316
>gi|229084444|ref|ZP_04216723.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
Rock3-44]
gi|228698872|gb|EEL51578.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
Rock3-44]
Length = 322
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTDEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EEVNRFVRYNANKGLMNLGLEPRFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 A---ELKWD 125
+L D
Sbjct: 308 TNVEKLSDD 316
>gi|229095937|ref|ZP_04226913.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
Rock3-29]
gi|229114891|ref|ZP_04244304.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
Rock1-3]
gi|228668583|gb|EEL24012.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
Rock1-3]
gi|228687447|gb|EEL41349.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
Rock3-29]
Length = 322
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + Q+ E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-DDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 A---ELKWD 125
+L D
Sbjct: 308 TNVEKLSDD 316
>gi|52143985|ref|YP_082843.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
E33L]
gi|228984529|ref|ZP_04144706.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|229155020|ref|ZP_04283134.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
ATCC 4342]
gi|51977454|gb|AAU19004.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
E33L]
gi|157955324|gb|ABW06037.1| NrdF [Bacillus thuringiensis serovar tochigiensis]
gi|228628578|gb|EEK85291.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
ATCC 4342]
gi|228775232|gb|EEM23621.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 322
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 A---ELKWD 125
+L D
Sbjct: 308 TNVEKLSDD 316
>gi|9629622|ref|NP_044898.1| ribonucleotide reductase subunit 2 [Murid herpesvirus 4]
gi|6625623|gb|AAF19324.1|AF105037_56 60 [murid herpesvirus 4]
gi|1850859|emb|CAA70275.1| ribonucleotide reductase, small subunit [Murid herpesvirus 4]
gi|2317992|gb|AAB66450.1| ribonucleotide reductase small [murid herpesvirus 4]
Length = 305
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 16/122 (13%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
+DE LH + N + E P + + EA +E ++ K
Sbjct: 189 KDELLHTRAAAVLYNSLIPAKERPD------AAWIKRLFQEAVEVEYSFIA-AKSKNVTL 241
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEY 116
+ ++++Q +R IG+EP++ P K NFFE T+Y
Sbjct: 242 VVPGEIKKFLQATCDRILQSIGVEPIYGSHAPVTCPLS----YNGCIKSVNFFEREGTDY 297
Query: 117 QQ 118
Sbjct: 298 ST 299
>gi|148688624|gb|EDL20571.1| mCG140327 [Mus musculus]
Length = 65
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 70 QFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELK 123
+F+A+ ++G +F ENPF +M E I L+ + NFFE RV EYQ+ +
Sbjct: 1 EFVADMLMLELGFNKIF-RVENPFDFM-ENISLEGKTNFFEKRVGEYQRMGVMS 52
>gi|30261453|ref|NP_843830.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
anthracis str. Ames]
gi|47526645|ref|YP_017994.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
anthracis str. 'Ames Ancestor']
gi|49184287|ref|YP_027539.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
anthracis str. Sterne]
gi|49477196|ref|YP_035577.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|65318723|ref|ZP_00391682.1| COG0208: Ribonucleotide reductase, beta subunit [Bacillus anthracis
str. A2012]
gi|118476922|ref|YP_894073.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
thuringiensis str. Al Hakam]
gi|165870361|ref|ZP_02215016.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis str. A0488]
gi|167634337|ref|ZP_02392658.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis str. A0442]
gi|167639338|ref|ZP_02397610.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis str. A0193]
gi|170686782|ref|ZP_02878002.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis str. A0465]
gi|170706310|ref|ZP_02896771.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis str. A0389]
gi|177651561|ref|ZP_02934350.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis str. A0174]
gi|190568085|ref|ZP_03020995.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis Tsiankovskii-I]
gi|196035278|ref|ZP_03102683.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
W]
gi|196046555|ref|ZP_03113780.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
03BB108]
gi|218902561|ref|YP_002450395.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
AH820]
gi|225863317|ref|YP_002748695.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
03BB102]
gi|227815798|ref|YP_002815807.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis str. CDC 684]
gi|228914025|ref|ZP_04077647.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228932735|ref|ZP_04095607.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228945050|ref|ZP_04107411.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|229090407|ref|ZP_04221650.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
Rock3-42]
gi|229120993|ref|ZP_04250235.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
95/8201]
gi|229183646|ref|ZP_04310869.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
BGSC 6E1]
gi|229602752|ref|YP_002865867.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis str. A0248]
gi|254682483|ref|ZP_05146344.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
anthracis str. CNEVA-9066]
gi|254726146|ref|ZP_05187928.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
anthracis str. A1055]
gi|254733899|ref|ZP_05191613.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
anthracis str. Western North America USA6153]
gi|254740411|ref|ZP_05198102.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
anthracis str. Kruger B]
gi|254753802|ref|ZP_05205837.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
anthracis str. Vollum]
gi|254758897|ref|ZP_05210924.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
anthracis str. Australia 94]
gi|301052993|ref|YP_003791204.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
anthracis CI]
gi|30255307|gb|AAP25316.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis str. Ames]
gi|47501793|gb|AAT30469.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis str. 'Ames Ancestor']
gi|49178214|gb|AAT53590.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis str. Sterne]
gi|49328752|gb|AAT59398.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|72414680|emb|CAG28950.1| ribonucleoside-diphosphate reductase class Ib beta chain [Bacillus
anthracis]
gi|118416147|gb|ABK84566.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Bacillus thuringiensis str. Al Hakam]
gi|157955314|gb|ABW06029.1| NrdF [Bacillus thuringiensis serovar finitimus]
gi|164713856|gb|EDR19378.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis str. A0488]
gi|167512777|gb|EDR88151.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis str. A0193]
gi|167530225|gb|EDR92951.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis str. A0442]
gi|170128844|gb|EDS97710.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis str. A0389]
gi|170669305|gb|EDT20048.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis str. A0465]
gi|172082839|gb|EDT67902.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis str. A0174]
gi|190560819|gb|EDV14794.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis Tsiankovskii-I]
gi|195991955|gb|EDX55918.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
W]
gi|196022739|gb|EDX61421.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
03BB108]
gi|218537212|gb|ACK89610.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
AH820]
gi|225785957|gb|ACO26174.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
03BB102]
gi|227004217|gb|ACP13960.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis str. CDC 684]
gi|228599889|gb|EEK57486.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
BGSC 6E1]
gi|228662653|gb|EEL18251.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
95/8201]
gi|228692990|gb|EEL46708.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
Rock3-42]
gi|228814719|gb|EEM60979.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228826940|gb|EEM72702.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228845630|gb|EEM90659.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|229267160|gb|ACQ48797.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
anthracis str. A0248]
gi|300375162|gb|ADK04066.1| ribonucleotide-diphosphate reductase beta subunit [Bacillus cereus
biovar anthracis str. CI]
gi|324325470|gb|ADY20730.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 322
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 A---ELKWD 125
+L D
Sbjct: 308 TNVEKLSDD 316
>gi|325171172|ref|YP_004251147.1| ribonucleoside diphosphate reductase, beta chain [Vibrio phage
ICP1]
gi|323512567|gb|ADX88022.1| ribonucleoside diphosphate reductase, beta chain [Vibrio phage
ICP1]
gi|323513935|gb|ADX89384.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
ICP1_2001_A]
gi|323514163|gb|ADX89611.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
ICP1_2004_A]
Length = 450
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 54/128 (42%), Gaps = 6/128 (4%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQ-KSRTMLHEATLLEIAYAHETM--PKGFVG 59
DE++H +IN + + L T E + + ++ E++++ + VG
Sbjct: 231 DETIHTRMDEAIINILLGDEVWLKTFEDIKPDIKEIVDSVYKQELSWSEYIFSEGRSIVG 290
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKNF-FETRVTEYQ 117
LN ++++Q+ + ++G+E F NP PWM +D+ + E Y
Sbjct: 291 LNTSLLKEWVQYKSQVVYKKLGIEQPFEDVINNPLPWMENWLDIDSYQVANQEADNNNY- 349
Query: 118 QGAELKWD 125
+ + D
Sbjct: 350 RLNSISDD 357
>gi|42780545|ref|NP_977792.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
ATCC 10987]
gi|42736465|gb|AAS40400.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
ATCC 10987]
Length = 322
Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 A---ELKWD 125
+L D
Sbjct: 308 TNVEKLSDD 316
>gi|55978391|ref|YP_145447.1| ribonucleoside-diphosphate reductase, beta subunit [Thermus
thermophilus HB8]
gi|55773564|dbj|BAD72004.1| ribonucleoside-diphosphate reductase, beta subunit [Thermus
thermophilus HB8]
Length = 294
Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
++E++H FG++++ ++ E+P + FQ+++ + E A G L
Sbjct: 163 KEENVHGLFGVELLRLLRTEHPEALGEGFQEEALRLAQGLFRAEEALLDWLFSAGEPALV 222
Query: 62 APSCEQYMQFIANRR---CHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTE 115
+ ++F+ R GL P+F E W + + KE +FF R
Sbjct: 223 --GHRETLEFLKGRYNQVLALHGLPPVFSVDEKALRDTEWFTLELLADKEVDFFNKRSVA 280
Query: 116 YQQ 118
Y +
Sbjct: 281 YAR 283
>gi|323512793|gb|ADX88247.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
ICP1_2006_D]
gi|323513021|gb|ADX88474.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
ICP1_2006_C]
gi|323513246|gb|ADX88698.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
ICP1_2006_B]
gi|323513473|gb|ADX88924.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
ICP1_2006_A]
gi|323513704|gb|ADX89154.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
ICP1_2005_A]
Length = 450
Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 51/119 (42%), Gaps = 5/119 (4%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQ-KSRTMLHEATLLEIAYAHETM--PKGFVG 59
DE++H +IN + + L T E + + ++ E++++ + VG
Sbjct: 231 DETIHTRMDEAIINILLGDEVWLKTFEDIKPDIKEIVDSVYKQELSWSEYIFSEGRSIVG 290
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKNF-FETRVTEY 116
LN ++++Q+ + ++G+E F NP PWM +D+ + E Y
Sbjct: 291 LNTSLLKEWVQYKSQVVYKKLGIEQPFEDVINNPLPWMENWLDIDSYQVANQEADNNNY 349
>gi|228926484|ref|ZP_04089556.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228833308|gb|EEM78873.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
Length = 322
Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q++++ +L E +E+AYA E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYAEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 A---ELKWD 125
+L D
Sbjct: 308 TNVEKLSDD 316
>gi|229029125|ref|ZP_04185222.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
AH1271]
gi|228732183|gb|EEL83068.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
AH1271]
Length = 322
Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + Q+ E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQLFTELSAEDQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 A---ELKWD 125
+L D
Sbjct: 308 TNVEKLSDD 316
>gi|229160405|ref|ZP_04288403.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
R309803]
gi|228623129|gb|EEK79957.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
R309803]
Length = 322
Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + Q+ E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 AELK 123
++
Sbjct: 308 TNVE 311
>gi|229102053|ref|ZP_04232765.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
Rock3-28]
gi|228681373|gb|EEL35538.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
Rock3-28]
Length = 322
Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + Q+ E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQVLLMELYEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-DDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 A---ELKWD 125
+L D
Sbjct: 308 TNVEKLSDD 316
>gi|157955319|gb|ABW06033.1| NrdF [Bacillus thuringiensis serovar pakistani]
Length = 322
Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSTEEQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 AELK 123
++
Sbjct: 308 TNVE 311
>gi|228938567|ref|ZP_04101175.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228971446|ref|ZP_04132072.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228978059|ref|ZP_04138438.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis Bt407]
gi|157955340|gb|ABW06049.1| NrdF [Bacillus thuringiensis serovar thuringiensis]
gi|157955368|gb|ABW06070.1| NrdF [Bacillus thuringiensis serovar galechiae]
gi|157955384|gb|ABW06082.1| NrdF [Bacillus thuringiensis serovar sotto]
gi|228781720|gb|EEM29919.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis Bt407]
gi|228788313|gb|EEM36266.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228821165|gb|EEM67182.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|326939076|gb|AEA14972.1| ribonucleotide-diphosphate reductase [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 322
Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 AELK 123
++
Sbjct: 308 TNVE 311
>gi|139472853|ref|YP_001129417.1| ORF60 [Human herpesvirus 8]
gi|1718316|gb|AAC57145.1| ORF 60 [Human herpesvirus 8 type M]
gi|2246534|gb|AAB62659.1| ORF 60 [Human herpesvirus 8]
gi|87196889|gb|ABD28915.1| ORF60 [Human herpesvirus 8]
gi|261853541|gb|ACY00463.1| ORF60 [Human herpesvirus 8]
gi|312275208|gb|ADQ57945.1| core gene UL40 family protein [Human herpesvirus 8]
Length = 305
Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 43/120 (35%), Gaps = 12/120 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH + N + + K + + + EA +EI + G +N
Sbjct: 189 RDELLHTKAASMLYNTMV----EIQEKPSHAEVQALFREAVNIEIRFIQ-AKAAGVTLVN 243
Query: 62 APSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
++++ A+R I + P+F P K NFFE ++Y
Sbjct: 244 VVDIRRFLEATADRILRDIFVPPIFGTPPPEACPLS----YTGSFKAVNFFERDNSDYTT 299
>gi|229177859|ref|ZP_04305232.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
172560W]
gi|228605650|gb|EEK63098.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
172560W]
Length = 322
Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 AELK 123
++
Sbjct: 308 TNVE 311
>gi|157955305|gb|ABW06022.1| NrdF [Bacillus thuringiensis serovar aizawai]
gi|157955352|gb|ABW06058.1| NrdF [Bacillus thuringiensis serovar colmeri]
gi|157955372|gb|ABW06073.1| NrdF [Bacillus thuringiensis serovar indiana]
gi|157955405|gb|ABW06098.1| NrdF [Bacillus thuringiensis serovar wuhanensis]
Length = 322
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 AELK 123
++
Sbjct: 308 TNVE 311
>gi|228907084|ref|ZP_04070948.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis IBL 200]
gi|157955401|gb|ABW06095.1| NrdF [Bacillus thuringiensis serovar toumanoffi]
gi|228852588|gb|EEM97378.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis IBL 200]
Length = 322
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 AELK 123
++
Sbjct: 308 TNVE 311
>gi|75759355|ref|ZP_00739452.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|218896385|ref|YP_002444796.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
G9842]
gi|228900033|ref|ZP_04064269.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis IBL 4222]
gi|228920164|ref|ZP_04083513.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228964415|ref|ZP_04125529.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar sotto str. T04001]
gi|74493187|gb|EAO56306.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|157955348|gb|ABW06055.1| NrdF [Bacillus thuringiensis serovar alesti]
gi|157955356|gb|ABW06061.1| NrdF [Bacillus thuringiensis serovar dakota]
gi|157955360|gb|ABW06064.1| NrdF [Bacillus thuringiensis serovar darmstadiensis]
gi|157955364|gb|ABW06067.1| NrdF [Bacillus thuringiensis serovar dendrolimus]
gi|157955380|gb|ABW06079.1| NrdF [Bacillus thuringiensis serovar ostriniae]
gi|218545942|gb|ACK98336.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
G9842]
gi|228795272|gb|EEM42764.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228839620|gb|EEM84912.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228859647|gb|EEN04071.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis IBL 4222]
Length = 322
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 AELK 123
++
Sbjct: 308 TNVE 311
>gi|157955332|gb|ABW06043.1| NrdF [Bacillus thuringiensis serovar galleriae]
gi|157955344|gb|ABW06052.1| NrdF [Bacillus thuringiensis serovar tolworthi]
Length = 322
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 AELK 123
++
Sbjct: 308 TNVE 311
>gi|30019505|ref|NP_831136.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
ATCC 14579]
gi|229043194|ref|ZP_04190917.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
AH676]
gi|229078637|ref|ZP_04211194.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
Rock4-2]
gi|229108909|ref|ZP_04238513.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
Rock1-15]
gi|229126769|ref|ZP_04255781.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
BDRD-Cer4]
gi|229144056|ref|ZP_04272472.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
BDRD-ST24]
gi|296502033|ref|YP_003663733.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
thuringiensis BMB171]
gi|29895049|gb|AAP08337.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
ATCC 14579]
gi|157955310|gb|ABW06026.1| NrdF [Bacillus thuringiensis serovar canadensis]
gi|157955392|gb|ABW06088.1| NrdF [Bacillus thuringiensis serovar thompsoni]
gi|157955396|gb|ABW06091.1| NrdF [Bacillus thuringiensis serovar tohokuensis]
gi|228639453|gb|EEK95867.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
BDRD-ST24]
gi|228656709|gb|EEL12535.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
BDRD-Cer4]
gi|228674565|gb|EEL29805.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
Rock1-15]
gi|228704707|gb|EEL57136.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
Rock4-2]
gi|228726156|gb|EEL77390.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
AH676]
gi|296323085|gb|ADH06013.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
thuringiensis BMB171]
Length = 322
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 AELK 123
++
Sbjct: 308 TNVE 311
>gi|229189534|ref|ZP_04316550.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
ATCC 10876]
gi|228593979|gb|EEK51782.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
ATCC 10876]
Length = 322
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAKEQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 AELK 123
++
Sbjct: 308 TNVE 311
>gi|157955376|gb|ABW06076.1| NrdF [Bacillus thuringiensis serovar morrisoni]
Length = 322
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 AELK 123
++
Sbjct: 308 TNVE 311
>gi|218233288|ref|YP_002366135.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
B4264]
gi|229149653|ref|ZP_04277884.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
m1550]
gi|157955328|gb|ABW06040.1| NrdF [Bacillus thuringiensis serovar entomocidus]
gi|157955388|gb|ABW06085.1| NrdF [Bacillus thuringiensis serovar subtoxicus]
gi|157955409|gb|ABW06101.1| NrdF [Bacillus cereus]
gi|218161245|gb|ACK61237.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
B4264]
gi|228633863|gb|EEK90461.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
m1550]
Length = 322
Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q++++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQDLLMELYEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 AELK 123
++
Sbjct: 308 TNVE 311
>gi|257125877|ref|YP_003163991.1| ribonucleoside-diphosphate reductase [Leptotrichia buccalis
C-1013-b]
gi|257049816|gb|ACV39000.1| Ribonucleoside-diphosphate reductase [Leptotrichia buccalis
C-1013-b]
Length = 335
Score = 57.3 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 51/119 (42%), Gaps = 7/119 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F + ++ + + + + ++++ E Y E + N
Sbjct: 199 DESIHGVFVGLLFQELYNSFSEEEKADMRAELKKLMYDLYENETRYTDEIYGDLGLTGNV 258
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
+Y+++ AN+ +G E F+ NP + ++++ + +FF + T Y++
Sbjct: 259 K---EYIRYNANKALMNLGFEEEFEVKNVNPI--VLNGLNVETTQHDFFSKKSTNYEKA 312
>gi|260889741|ref|ZP_05901004.1| ribonucleoside-diphosphate reductase, beta subunit [Leptotrichia
hofstadii F0254]
gi|260860347|gb|EEX74847.1| ribonucleoside-diphosphate reductase, beta subunit [Leptotrichia
hofstadii F0254]
Length = 335
Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F + ++ + + + + ++++ E Y E +GL
Sbjct: 200 DESIHGVFVGLLFQELYNSFSEEEKADMRAELKKLMYDLYENETRYTDEIYGD--LGLTG 257
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
++Y+++ AN+ +G E F+ NP + ++++ + +FF + T Y++
Sbjct: 258 D-VKEYIRYNANKALMNLGFEEEFEVKNVNPI--VLNGLNVETTQHDFFSKKSTNYEKA 313
>gi|157955336|gb|ABW06046.1| NrdF [Bacillus thuringiensis serovar kurstaki]
Length = 322
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q++++ +L E + +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELSEIEMAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 AELK 123
++
Sbjct: 308 TNVE 311
>gi|229057079|ref|ZP_04196471.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
AH603]
gi|228720220|gb|EEL71799.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
AH603]
Length = 322
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q +++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFTELSAKEQQEVQTETQELLMELYEIELAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 AELK 123
++
Sbjct: 308 TNVE 311
>gi|163939261|ref|YP_001644145.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
weihenstephanensis KBAB4]
gi|229010750|ref|ZP_04167947.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
DSM 2048]
gi|229132251|ref|ZP_04261107.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
BDRD-ST196]
gi|229166287|ref|ZP_04294046.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
AH621]
gi|163861458|gb|ABY42517.1| Ribonucleoside-diphosphate reductase [Bacillus weihenstephanensis
KBAB4]
gi|228617232|gb|EEK74298.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
AH621]
gi|228651189|gb|EEL07168.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
BDRD-ST196]
gi|228750424|gb|EEM00253.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
DSM 2048]
Length = 322
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + QI E +E Q +++ +L E +E+AY E +GL
Sbjct: 192 IRDESIHGVFVGILAQQIFTELSAEEQQEVQTETQELLMELYEIELAYTEEIY--TSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 250 V-EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 307
Query: 120 AELK 123
++
Sbjct: 308 TNVE 311
>gi|262285102|gb|ACY41130.1| ribonucleotide reductase subunit 2 [Wood mouse herpesvirus]
Length = 305
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 41/122 (33%), Gaps = 16/122 (13%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
+DE LH + N + E P + + EA +E A+ K
Sbjct: 189 KDELLHTRAAAVLYNTLIPAKERPD------PAWIKRLFQEAVEVEYAFIA-AKSKNVTL 241
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEY 116
+ ++++Q +R IG+ L+ P K NFFE T+Y
Sbjct: 242 VVPGEIKRFLQATCDRILQSIGVGALYGSHAPVTCPLS----YNGCIKSVNFFEREGTDY 297
Query: 117 QQ 118
Sbjct: 298 ST 299
>gi|291295355|ref|YP_003506753.1| ribonucleoside-diphosphate reductase [Meiothermus ruber DSM 1279]
gi|290470314|gb|ADD27733.1| Ribonucleoside-diphosphate reductase [Meiothermus ruber DSM 1279]
Length = 429
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 13/125 (10%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + ++ P K ++ +ML LE Y+ M +GL
Sbjct: 195 IRDESIHGVYVGLLAQEVYAGLPEAQQKTAREGVYSMLEHLAGLEERYSR--MLYTPLGL 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK---NFFETRVT 114
+ + ++ A++ +GLEP F + NP + L +FF T+
Sbjct: 253 T-EAVVTFSRYNADKALMNLGLEPYFGVSAEAVNP----VVLAGLSTHTKNHDFFSTKGN 307
Query: 115 EYQQG 119
Y +
Sbjct: 308 GYVKA 312
>gi|326536370|ref|YP_004300811.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage 133]
gi|299483451|gb|ADJ19545.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage 133]
Length = 382
Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 46/122 (37%), Gaps = 7/122 (5%)
Query: 2 RDESLHLNFGIDVINQIKIE----NPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKG 56
RDE+LH ++ Q+ + ++++ M E E A+A
Sbjct: 235 RDENLHHQGTRYILQQMNKGIDGTEWREIALDCKEEAEAMFLEVRAQERAWATYVYRNGH 294
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEKNF-FETRVT 114
GL +++ + +GL P+ + +P PW+++ + + E ++
Sbjct: 295 PDGLTTDLVHEFIDYQLVPAMKNVGLNCPIERPKRHPLPWVNKYLMASSVQVAKQEAELS 354
Query: 115 EY 116
Y
Sbjct: 355 SY 356
>gi|328912184|gb|AEB63780.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus
amyloliquefaciens LL3]
Length = 305
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 55/123 (44%), Gaps = 7/123 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE+LH + + +I + + KE + + +L + E+ Y + VGL
Sbjct: 176 IRDEALHGVYTGLLAQEIYSKQTEIKKKELYKWTIDLLLDLYENELDYTTDLY--DPVGL 233
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
++++++ AN+ + +G + F E NP + + K + +FF + Y++
Sbjct: 234 THD-VKKFIRYNANKALNNLGFDHYFHEEEINPV--VLNGLSTKTKSMDFFSQKGNSYRK 290
Query: 119 GAE 121
Sbjct: 291 ATA 293
>gi|47213107|emb|CAF89527.1| unnamed protein product [Tetraodon nigroviridis]
Length = 369
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 85 LFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
++ ENPF +M E I L+ + NFFE RV EYQ+ +
Sbjct: 320 IY-RAENPFDFM-ENISLEGKTNFFEKRVGEYQRMGVM 355
>gi|327440528|dbj|BAK16893.1| ribonucleotide reductase, beta subunit [Solibacillus silvestris
StLB046]
Length = 320
Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 13/124 (10%)
Query: 1 MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
+RDES+H F ++ E +E L + E+ Y +
Sbjct: 193 LRDESIHGVAVGFFAQNIFKTFTEE----KQQELTLWGYEYLLDLYQNEMKYTDDLY--A 246
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTE 115
GL+ ++Y+++ AN+ +GL+ +F E NP M+ + + +FF + +
Sbjct: 247 ETGLSPE-VKKYVRYNANKALMNLGLDTMFPDEEVNPVV-MNGISNTGSTYDFFSQKGST 304
Query: 116 YQQG 119
Y
Sbjct: 305 YAVA 308
>gi|147800139|emb|CAN68817.1| hypothetical protein VITISV_036653 [Vitis vinifera]
Length = 924
Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 78 HQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELK 123
+ E + ENPF WM E I L+ NFF+ R+ +YQ+ + +
Sbjct: 745 VALXYERKYNV-ENPFDWM-EFISLQGNANFFQRRMGDYQKASIMS 788
>gi|326800312|ref|YP_004318131.1| ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
gi|326551076|gb|ADZ79461.1| Ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
Length = 327
Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 17/127 (13%)
Query: 3 DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
DES+H F D+ ++ + E ++K +L E+ Y E V
Sbjct: 197 DESIHGVFVGLLAQDIFRKLSNQE------EVKKKVVDLLMLLYENELKYTEEIY--TDV 248
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEY 116
GL A ++Y+++ AN+ +G E LF+ E NP + ++L+ + +FF + T Y
Sbjct: 249 GLTAE-VKEYVRYNANKALMNLGFEELFEVKEVNPI--VLNGLNLETTQHDFFSKKSTNY 305
Query: 117 QQGAELK 123
++ ++
Sbjct: 306 EKATQIS 312
>gi|227537625|ref|ZP_03967674.1| ribonucleoside-diphosphate reductase [Sphingobacterium spiritivorum
ATCC 33300]
gi|300771015|ref|ZP_07080892.1| ribonucleotide-diphosphate reductase subunit beta [Sphingobacterium
spiritivorum ATCC 33861]
gi|227242511|gb|EEI92526.1| ribonucleoside-diphosphate reductase [Sphingobacterium spiritivorum
ATCC 33300]
gi|300762288|gb|EFK59107.1| ribonucleotide-diphosphate reductase subunit beta [Sphingobacterium
spiritivorum ATCC 33861]
Length = 328
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F + I P +E + + T+L+E E+ Y E VGL A
Sbjct: 198 DESIHGVFVGLIAQDIFRRIP--NKEEVKARFLTLLNELYENELKYTEEIY--TVVGLTA 253
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQGA 120
++Y+++ N+ +G +P+F+ + NP + ++ + + +FF + T Y++
Sbjct: 254 E-VKEYVRYNGNKALMNLGFDPIFEVKQVNPI--VLNGLNTETTQHDFFSKKSTNYEKAT 310
Query: 121 EL 122
E+
Sbjct: 311 EI 312
>gi|262038309|ref|ZP_06011695.1| ribonucleoside-diphosphate reductase, beta subunit [Leptotrichia
goodfellowii F0264]
gi|261747660|gb|EEY35113.1| ribonucleoside-diphosphate reductase, beta subunit [Leptotrichia
goodfellowii F0264]
Length = 334
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F + +I + +++ + ++H+ E Y E VGL A
Sbjct: 199 DESIHGVFVGLLSQEIYATFSEEEKESVRKELKELMHDLYENEARYTDEVYGD--VGLTA 256
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
++Y+++ AN+ +G E F+ + NP + ++++ + +FF + T Y++
Sbjct: 257 D-VKEYIRYNANKALMNLGFEEEFEVKDVNPI--VLNGLNVETTQHDFFSKKSTNYEKA 312
>gi|196040733|ref|ZP_03108032.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
NVH0597-99]
gi|206977638|ref|ZP_03238531.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
H3081.97]
gi|217958931|ref|YP_002337479.1| ribonucleoside-diphosphate reductase, subunit beta [Bacillus cereus
AH187]
gi|222095088|ref|YP_002529148.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
Q1]
gi|229138142|ref|ZP_04266740.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
BDRD-ST26]
gi|229195652|ref|ZP_04322418.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
m1293]
gi|196028523|gb|EDX67131.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
NVH0597-99]
gi|206744211|gb|EDZ55625.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
H3081.97]
gi|217064629|gb|ACJ78879.1| ribonucleoside-diphosphate reductase, subunit beta [Bacillus cereus
AH187]
gi|221239146|gb|ACM11856.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
Q1]
gi|228587901|gb|EEK45953.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
m1293]
gi|228645487|gb|EEL01721.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
BDRD-ST26]
Length = 133
Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 8/129 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
++DES+H F + QI E +E Q++++ +L E +E+AY E
Sbjct: 3 VKDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEI---YTSIG 59
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 60 LVEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 118
Query: 120 A---ELKWD 125
+L D
Sbjct: 119 TNVEKLSDD 127
>gi|229172094|ref|ZP_04299659.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
MM3]
gi|228611437|gb|EEK68694.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
MM3]
Length = 133
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
++DES+H F + Q+ +E +E Q++++ +L E +E+AY E
Sbjct: 3 VKDESIHGVFVGILAQQLFVELSAEDQQEVQKETQELLMELYEIEMAYTEEI---YTSIG 59
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 60 LVEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 118
Query: 120 AELK 123
++
Sbjct: 119 TNVE 122
>gi|294998842|gb|ADF58156.1| ribonucleoside-diphosphate reductase beta subunit [Pseudomonas
phage JG004]
Length = 348
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 3 DESLHLNFGIDVINQIKIE--NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF-VG 59
DE LH ++INQ E P +K R + E +P G G
Sbjct: 210 DEDLHGVVSAEIINQYYAEIGRPLSEDTRRVEKIRQAIDHVYAHECRIVDMAIPGGELNG 269
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKNFF 109
+A + + ++++ N C ++GLE F+ + P W K +FF
Sbjct: 270 ESAENYKAFVRYRLNVWCRRLGLEDHFENDDTPIKDWFEMNTYAYKMIDFF 320
>gi|228957728|ref|ZP_04119472.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228801971|gb|EEM48844.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus
thuringiensis serovar pakistani str. T13001]
Length = 133
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
++DES+H F + QI E +E Q++++ +L E +E+AY E
Sbjct: 3 VKDESIHGVFVGILAQQIFAELSTEEQQEVQKETQELLMELYEIEMAYTEEI---YTSIG 59
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 60 LVEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 118
Query: 120 AELK 123
++
Sbjct: 119 TNVE 122
>gi|56964873|ref|YP_176604.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus clausii
KSM-K16]
gi|56911116|dbj|BAD65643.1| ribonucleoside-diphosphate reductase beta chain [Bacillus clausii
KSM-K16]
Length = 334
Score = 53.8 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +I + KE Q + +L E E+ Y + + +
Sbjct: 195 LRDEAIHGVYIGLLAQEIYNKQSPDTQKELHQFAIELLDELYKNELLYTEDLYDQVGL-- 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
+ ++++++ AN+ +G +P F+ + NP + ++ K + +FF + Y++
Sbjct: 253 -SHDVKKFIRYNANKALMNLGFDPYFEDEDINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309
Query: 119 GAE 121
Sbjct: 310 ATV 312
>gi|308173699|ref|YP_003920404.1| ribonucleoside-diphosphate reductase minor subunit [Bacillus
amyloliquefaciens DSM 7]
gi|307606563|emb|CBI42934.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus
amyloliquefaciens DSM 7]
gi|328553367|gb|AEB23859.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
amyloliquefaciens TA208]
gi|328911843|gb|AEB63439.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus
amyloliquefaciens LL3]
Length = 329
Score = 53.8 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +I + E ++ + +L E E+ Y + + +
Sbjct: 195 LRDEAIHGVYVGLLAQEIYNKQTEAKKAELREFAIELLEELYHNELEYTEDLYDQVGL-- 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
+ ++++++ AN+ +G +P F+ + NP + ++ K + +FF + Y++
Sbjct: 253 -SHDVKKFIRYNANKALMNLGFDPYFEEEDINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309
Query: 119 GAE 121
Sbjct: 310 ATV 312
>gi|326804460|ref|YP_004327264.1| ribonucleotide-diphosphate reductase beta subunit [Pseudomonas
phage PAK_P1]
gi|290873873|gb|ADD65076.1| ribonucleotide-diphosphate reductase beta subunit [Pseudomonas
phage PAK_P1]
Length = 348
Score = 53.8 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 3 DESLHLNFGIDVINQIKIE--NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF-VG 59
DE LH ++INQ E P +K R + E +P G G
Sbjct: 210 DEDLHGVVSAEIINQYYAEIGRPLSEDTRRVEKIRQAIDHVYAHECRIVDMAIPGGELNG 269
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKNFF 109
+A + + ++++ N C ++GLE F+ + P W K +FF
Sbjct: 270 ESAENYKAFVRYRLNVWCRRLGLEDHFENDDTPIKDWFEMNTYAYKMIDFF 320
>gi|326333061|ref|ZP_08199312.1| ribonucleoside-diphosphate reductase, beta subunit [Nocardioidaceae
bacterium Broad-1]
gi|325949135|gb|EGD41224.1| ribonucleoside-diphosphate reductase, beta subunit [Nocardioidaceae
bacterium Broad-1]
Length = 334
Score = 53.4 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 51/131 (38%), Gaps = 18/131 (13%)
Query: 2 RDESLHLNFGIDVINQ-------------IKIENPHLWTKEFQQKSRTMLHEATLLEIAY 48
RDE+LH G + N + E L+ + HEA ++E+ +
Sbjct: 199 RDENLHATGGAWLFNTTLDEYAATVPADKFEAERDDLFARVRGVAEHLYAHEARIVEMLF 258
Query: 49 AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN 107
AH + G+ E +++ + + +EPLF NP W I+ + +
Sbjct: 259 AHGPI----TGIEQADLEAFVRSRIDMTLENMRMEPLFGVEPNPVAEWFYAGINGTQFHD 314
Query: 108 FFETRVTEYQQ 118
FF+ EY +
Sbjct: 315 FFQVTGNEYNR 325
>gi|299537049|ref|ZP_07050352.1| ribonucleoside-diphosphate reductase subunit beta [Lysinibacillus
fusiformis ZC1]
gi|298727290|gb|EFI67862.1| ribonucleoside-diphosphate reductase subunit beta [Lysinibacillus
fusiformis ZC1]
Length = 322
Score = 53.4 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 13/124 (10%)
Query: 1 MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
+RDES+H F ++ Q E +E +L + E+ Y +
Sbjct: 193 LRDESIHGVAVGFFAQNLFKQFSKE----KQEELHLWGYELLLDLYQNEMKYTDDIY--A 246
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTE 115
GL+ Y+++ AN+ +G E +F E NP M+ + + +FF +
Sbjct: 247 ETGLSPE-VRAYVRYNANKALMNVGFEAMFPEEEVNPIV-MNGIRNEGSTYDFFSQKGAT 304
Query: 116 YQQG 119
Y +
Sbjct: 305 YAKA 308
>gi|206968346|ref|ZP_03229302.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
AH1134]
gi|228951834|ref|ZP_04113932.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|229069005|ref|ZP_04202298.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
F65185]
gi|206737266|gb|EDZ54413.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
AH1134]
gi|228714117|gb|EEL65999.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
F65185]
gi|228807757|gb|EEM54278.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 133
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
++DES+H F + QI E +E Q++++ +L E +E+AY E
Sbjct: 3 VKDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEI---YTSIG 59
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+++++ AN+ +GLEP F+ E NP ++ + K +FF + Y +
Sbjct: 60 LVEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 118
Query: 120 AELK 123
++
Sbjct: 119 TNVE 122
>gi|323495950|ref|ZP_08101016.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
sinaloensis DSM 21326]
gi|323318985|gb|EGA71930.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
sinaloensis DSM 21326]
Length = 323
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 51/134 (38%), Gaps = 13/134 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + E + + ++ +++ +E Y VGL
Sbjct: 193 IRDEAIHGYYIGYKFQLAFNELSEQEQAKVKDEAYSLMFSLYEIESQYTESLY--DQVGL 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVI-DLKKEKNFFETRVTEY 116
+ ++ + AN+ +G EPLF NP M+ + + + +FF + Y
Sbjct: 251 T-EDVKHFLHYNANKALMNLGFEPLFPDELCQVNPAI-MAALSPNADENHDFFSGSGSSY 308
Query: 117 QQGAEL-----KWD 125
G + WD
Sbjct: 309 VIGKAVATEDEDWD 322
>gi|126650012|ref|ZP_01722245.1| ribonucleotide-diphosphate [Bacillus sp. B14905]
gi|126593184|gb|EAZ87146.1| ribonucleotide-diphosphate [Bacillus sp. B14905]
Length = 322
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 13/124 (10%)
Query: 1 MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
+RDES+H F ++ Q E + Q +L + E+ Y +
Sbjct: 193 LRDESIHGVAVGFFAQNLYKQFSKE----KQESLQLWGYELLLDLYQNEMKYTEDIY--A 246
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTE 115
GL+ + Y+++ AN+ +G E +F E NP M+ + + +FF +
Sbjct: 247 ETGLSPE-VKAYVRYNANKALMNVGFEAMFPEEEVNPIV-MNGIRNEGSTYDFFSQKGAT 304
Query: 116 YQQG 119
Y +
Sbjct: 305 YAKA 308
>gi|311068263|ref|YP_003973186.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
atrophaeus 1942]
gi|310868780|gb|ADP32255.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
atrophaeus 1942]
Length = 328
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +I + P E ++ S +L + E+ Y + + +
Sbjct: 195 LRDEAIHGVYIGLLAQEIYNKQPEEKKAELREFSIELLEQLYENELEYTEDLYDQVGL-- 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
+ ++++++ AN+ +G + F+ E NP + ++ K + +FF + Y++
Sbjct: 253 -SHDVKKFIRYNANKALMNLGFDSYFEEEEINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309
Query: 119 GAE--LKWD 125
+K D
Sbjct: 310 ATVEPIKDD 318
>gi|38707874|ref|NP_944994.1| Ribonucleoside triphosphate reductase, beta chain [Enterobacteria
phage Felix 01]
gi|238801854|ref|YP_002922904.1| ribonucleoside triphosphate reductase, beta chain [Enterobacteria
phage WV8]
gi|33340477|gb|AAQ14828.1| putative ribonucleoside diphosphate reductase beta chain
[Enterobacteria phage Felix 01]
gi|216263067|gb|ACJ71935.1| ribonucleoside triphosphate reductase, beta chain [Enterobacteria
phage WV8]
Length = 357
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 51/127 (40%), Gaps = 5/127 (3%)
Query: 3 DESLHLNFGIDVIN-QIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM--PKGFVG 59
DE LH I+V+ ++ + ++ + + +L E E +++ + VG
Sbjct: 222 DEILHTKIDIEVLKETLRDDEWQKAFQQILPEIKVILDEVVESEEKWSYYIFSEGRAVVG 281
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKEKNF-FETRVTEYQ 117
LN +++ + A G+ F + P +M + +++ KE+N E + Y
Sbjct: 282 LNTKLLHEWVYYNAAPLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKEQNANQEQQNGAYL 341
Query: 118 QGAELKW 124
+
Sbjct: 342 LNTVVDD 348
>gi|269975299|gb|ACZ55523.1| ribonucleoside diphosphate reductase beta chain [Staphylococcus
phage SA1]
Length = 357
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 51/127 (40%), Gaps = 5/127 (3%)
Query: 3 DESLHLNFGIDVIN-QIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM--PKGFVG 59
DE LH I+V+ ++ + ++ + + +L E E +++ + VG
Sbjct: 222 DEILHTKIDIEVLKETLRDDEWQKAFQQILPEIKVILDEVVESEEKWSYYIFSEGRAVVG 281
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKEKNF-FETRVTEYQ 117
LN +++ + A G+ F + P +M + +++ KE+N E + Y
Sbjct: 282 LNTKLLHEWVYYNAAPLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKEQNANQEQQNGAYL 341
Query: 118 QGAELKW 124
+
Sbjct: 342 LNTVVDD 348
>gi|169827410|ref|YP_001697568.1| ribonucleoside-diphosphate reductase subunit beta [Lysinibacillus
sphaericus C3-41]
gi|168991898|gb|ACA39438.1| Ribonucleoside-diphosphate reductase subunit beta [Lysinibacillus
sphaericus C3-41]
Length = 318
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 13/124 (10%)
Query: 1 MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
+RDES+H F ++ Q E + Q +L + E+ Y +
Sbjct: 189 LRDESIHGVAVGFFAQNLYKQFSKE----KQEALQLWGYELLLDLYQNEMKYTEDIY--A 242
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTE 115
GL+ + Y+++ AN+ +G E +F E NP M+ + + +FF +
Sbjct: 243 ETGLSPE-VKAYVRYNANKALMNVGFEAMFPEEEVNPIV-MNGIRNEGSTYDFFSQKGAT 300
Query: 116 YQQG 119
Y +
Sbjct: 301 YAKA 304
>gi|67906414|gb|AAY82584.1| ribonucleotide reductase subunit 2 [Carassius carassius]
Length = 246
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
RDE LH +F + HL K ++ + ++ A +E + + +P +G+
Sbjct: 195 RDEGLHCDFACLMFK-------HLVNKPSEETVKKIIVNAVAIEQEFLTDALPVKLIGM 246
>gi|33340378|gb|AAQ14729.1|AF320576_197 putative ribonucleoside diphosphate reductase beta chain
[Enterobacteria phage Felix 01]
Length = 377
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 51/127 (40%), Gaps = 5/127 (3%)
Query: 3 DESLHLNFGIDVIN-QIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM--PKGFVG 59
DE LH I+V+ ++ + ++ + + +L E E +++ + VG
Sbjct: 242 DEILHTKIDIEVLKETLRDDEWQKAFQQILPEIKVILDEVVESEEKWSYYIFSEGRAVVG 301
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKEKNF-FETRVTEYQ 117
LN +++ + A G+ F + P +M + +++ KE+N E + Y
Sbjct: 302 LNTKLLHEWVYYNAAPLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKEQNANQEQQNGAYL 361
Query: 118 QGAELKW 124
+
Sbjct: 362 LNTVVDD 368
>gi|157692410|ref|YP_001486872.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus pumilus
SAFR-032]
gi|194015081|ref|ZP_03053698.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
pumilus ATCC 7061]
gi|157681168|gb|ABV62312.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus pumilus
SAFR-032]
gi|194014107|gb|EDW23672.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
pumilus ATCC 7061]
Length = 326
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +I + KE S +L+E E+ Y + + +
Sbjct: 195 LRDEAIHGVYVGLLAQEIYNKQTPDVQKELYDFSIDLLNELYENELHYTEDIYDQVNL-- 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
+ ++++++ AN+ +G P F+ E NP + ++ K + +FF + Y++
Sbjct: 253 -SHDVKKFIRYNANKALMNLGFAPYFEEEEINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309
Query: 119 GAE--LKWD 125
LK D
Sbjct: 310 ATVEPLKDD 318
>gi|269123322|ref|YP_003305899.1| Ribonucleoside-diphosphate reductase [Streptobacillus moniliformis
DSM 12112]
gi|268314648|gb|ACZ01022.1| Ribonucleoside-diphosphate reductase [Streptobacillus moniliformis
DSM 12112]
Length = 333
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F + +I E + + +++ + +E E+ + E VGL +
Sbjct: 199 DESIHGVFVGKLAQEIFEEMSFVEKESVKKEIMNLFYELYENELKFTDEIYSD--VGLTS 256
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
++Y+++ N+ +G + F+ E N + ++++ + +FF + T Y++
Sbjct: 257 E-VKEYIRYNGNKALMNLGFKEEFEIKEVNAI--VLNGLNVETTQHDFFSKKSTNYEK 311
>gi|213855386|ref|ZP_03383626.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
Length = 80
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTE 115
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V+
Sbjct: 1 MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 60
Query: 116 Y---QQGAELKWD 125
Y Q +E+ D
Sbjct: 61 YLVGQIDSEVDTD 73
>gi|296330954|ref|ZP_06873429.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305674472|ref|YP_003866144.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
subtilis subsp. spizizenii str. W23]
gi|296151959|gb|EFG92833.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305412716|gb|ADM37835.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 329
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +I + E + + +L+E E+ Y + + +
Sbjct: 195 LRDEAIHGVYVGLLAQEIYNKQTEEKKAELRGFAIDLLNELYENELEYTEDLYDQVGL-- 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
+ ++++++ AN+ +G +P F+ + NP + ++ K + +FF + Y++
Sbjct: 253 -SHDVKKFIRYNANKALMNLGFDPYFEEEDINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309
Query: 119 GAE--LKWD 125
LK D
Sbjct: 310 ATVEPLKDD 318
>gi|257865182|ref|ZP_05644835.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
EC30]
gi|257871507|ref|ZP_05651160.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
EC10]
gi|257874804|ref|ZP_05654457.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
EC20]
gi|325571550|ref|ZP_08147050.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
casseliflavus ATCC 12755]
gi|257799116|gb|EEV28168.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
EC30]
gi|257805671|gb|EEV34493.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
EC10]
gi|257808970|gb|EEV37790.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
EC20]
gi|325156026|gb|EGC68222.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
casseliflavus ATCC 12755]
Length = 321
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ + +L+E E Y E +G
Sbjct: 189 IRDESVHGTYIGYKFQLGFNELPEDEQQKLKDWMYDLLYELYENEERYTEELY--DEIGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 247 T-EEVKTFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 304
Query: 118 QGA--ELKWD 125
G+ +K D
Sbjct: 305 LGSVEAMKDD 314
>gi|9630287|ref|NP_046714.1| hypothetical protein SPBc2p162 [Bacillus phage SPBc2]
gi|50812253|ref|NP_389886.2| ribonucleotide-diphosphate reductase subunit beta [Bacillus
subtilis subsp. subtilis str. 168]
gi|75090792|sp|O64174|BNRDF_BPSPC RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
AltName: Full=Ribonucleotide reductase small subunit
gi|81637506|sp|O30601|YOSP_BACSU RecName: Full=SPBc2 prophage-derived ribonucleoside-diphosphate
reductase subunit beta; AltName: Full=Ribonucleotide
reductase small subunit
gi|2522310|gb|AAB92486.1| YojQ/S [Bacillus subtilis subsp. subtilis str. 168]
gi|3025640|gb|AAC13135.1| unknown [Bacillus phage SPbeta]
gi|32468776|emb|CAB13896.2| SPbeta phage ribonucleoside-diphosphate reductase, beta subunit
[Bacillus subtilis subsp. subtilis str. 168]
Length = 329
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 55/123 (44%), Gaps = 7/123 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +I + KE + +L E E+ Y +
Sbjct: 195 IRDEAIHGVYVGLLAQEIYKKQTPQKQKELYAWALNLLQELYENELEYTED---VYDQVG 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
AP ++++++ AN+ + +G + F+ + NP + ++ K + +FF T+ Y++
Sbjct: 252 LAPDVKKFIRYNANKALNNLGFDHWFEEEDVNPI--VINGLNTKTKSHDFFSTKGNGYKK 309
Query: 119 GAE 121
Sbjct: 310 ATV 312
>gi|301331892|gb|ADK70922.1| U27.5 [Elephant endotheliotropic herpesvirus 2]
Length = 301
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 12/118 (10%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDES+H + + ++ + +E + + G +N
Sbjct: 185 RDESIHTTAATKLYLNYVTPE----NRPSYSFIYSLFSDVIRIEKEFIN-AKVDGVGLIN 239
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEY 116
++ +A++ +I ++PL+ P P + ++K FFE R TEY
Sbjct: 240 KKVIFDTLEGVADQLLARINMQPLYATQIPNNCPLP----LSTIEKNVCFFEKRNTEY 293
>gi|289423472|ref|ZP_06425274.1| ribonucleoside-diphosphate reductase, beta subunit
[Peptostreptococcus anaerobius 653-L]
gi|289156106|gb|EFD04769.1| ribonucleoside-diphosphate reductase, beta subunit
[Peptostreptococcus anaerobius 653-L]
Length = 337
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 7/121 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH + + + E + E + +L E E Y +
Sbjct: 207 LRDESLHGKYIGLLAQEKLREFSYDDRNELKDAVYRLLKELMENEEKYTRMLYEGLGL-- 264
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
++++ AN +G E +K N + + + + +FF T+ YQ+
Sbjct: 265 -EDQVINFLRYNANSALVNLGFEEFYKVEPVNAI--VLNGLSTETKTHDFFSTKGNGYQK 321
Query: 119 G 119
G
Sbjct: 322 G 322
>gi|308172806|ref|YP_003919511.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
amyloliquefaciens DSM 7]
gi|307605670|emb|CBI42041.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
amyloliquefaciens DSM 7]
Length = 327
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 55/123 (44%), Gaps = 7/123 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +I + E + + +L E E+AY + VGL
Sbjct: 198 IRDEAIHGVYVGLLAQEIYGKQDPDVQLEMRDFAVELLTELYDNEVAYTEDLY--DAVGL 255
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
++++++ AN+ +G +P F + NP + ++ K + +FF + Y++
Sbjct: 256 THD-VKRFLRYNANKALQNLGFDPYFEEERPNPI--VMNGLNTKTKSHDFFSQKGNGYKK 312
Query: 119 GAE 121
Sbjct: 313 ATV 315
>gi|307244651|ref|ZP_07526755.1| ribonucleoside-diphosphate reductase, beta subunit
[Peptostreptococcus stomatis DSM 17678]
gi|306492032|gb|EFM64081.1| ribonucleoside-diphosphate reductase, beta subunit
[Peptostreptococcus stomatis DSM 17678]
Length = 328
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 7/121 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDESLH + + + E + E ++K ++L E E Y +
Sbjct: 201 LRDESLHGKYIGLLAQEKFNEFHYDDKNELKEKVYSLLKELMENEEKYTKLLYEGSGL-- 258
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
++++ AN +G E +K N + + + + +FF T+ YQ+
Sbjct: 259 -EEQVINFLKYNANTALTNMGFEEFYKVEPVNAI--VLNGLSTETKTHDFFSTKGNGYQK 315
Query: 119 G 119
G
Sbjct: 316 G 316
>gi|310641424|ref|YP_003946182.1| ribonucleoside-diphosphate reductase beta chain [Paenibacillus
polymyxa SC2]
gi|309246374|gb|ADO55941.1| Ribonucleoside-diphosphate reductase beta chain [Paenibacillus
polymyxa SC2]
Length = 321
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 5/120 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + +I E ++ Q +L E Y +
Sbjct: 191 LRDESIHGVYVGVLAQEIYAELDEEEQRDLYQTLVGLLRYLHNNEEQYTEQI---YAPIG 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ ++++ AN+ +G +PLF+ E NP + + + K+ +FF + Y +
Sbjct: 248 LVDDVKVFLRYNANKAMMNLGFDPLFEEEEVNPIVF-NGISTHTKQHDFFSKKGNGYVRA 306
>gi|297567587|ref|YP_003686558.1| hypothetical protein Mesil_3232 [Meiothermus silvanus DSM 9946]
gi|297567764|ref|YP_003686735.1| hypothetical protein Mesil_3416 [Meiothermus silvanus DSM 9946]
gi|296852036|gb|ADH65050.1| hypothetical protein Mesil_3232 [Meiothermus silvanus DSM 9946]
gi|296852213|gb|ADH65227.1| hypothetical protein Mesil_3416 [Meiothermus silvanus DSM 9946]
Length = 323
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 9/123 (7%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + Q+ P + R L + + LE AY E
Sbjct: 189 LRDEAIHGVYVGMLAQQVYARLPEGEQSRLRTALREDLEKLSALEEAYTEEL---YAPIG 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116
++ ++ A++ +G P F NP + I L+ + +FF T+ Y
Sbjct: 246 RVEEVRRFCRYNADKALMNLGQPPYFGVRAEEVNPV--VLAGISLRTKNHDFFSTKGNGY 303
Query: 117 QQG 119
+
Sbjct: 304 VKA 306
>gi|213581345|ref|ZP_03363171.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 90
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 48 YAHETMPK-GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 106
+A +GLN QY+++I N R +GL+ F+ NP PW++ + +
Sbjct: 1 WADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQ 60
Query: 107 NF-FETRVTEY---QQGAELKWD 125
E V+ Y Q +E+ D
Sbjct: 61 VAPQEVEVSSYLVGQIDSEVDTD 83
>gi|213420352|ref|ZP_03353418.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 88
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 55 KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRV 113
+GLN QY+++I N R +GL+ F+ NP PW++ + + E V
Sbjct: 7 GSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEV 66
Query: 114 TEY---QQGAELKWD 125
+ Y Q +E+ D
Sbjct: 67 SSYLVGQIDSEVDTD 81
>gi|154508355|ref|ZP_02043997.1| hypothetical protein ACTODO_00852 [Actinomyces odontolyticus ATCC
17982]
gi|153797989|gb|EDN80409.1| hypothetical protein ACTODO_00852 [Actinomyces odontolyticus ATCC
17982]
Length = 425
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + E+ + + + ++L+E E Y + +GL
Sbjct: 295 IRDEAVHGYYIGYKYQLAVNESSQERQDDLRDYTYSLLYELYENEEQYTEDLY--DPLGL 352
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF NP + + + +FF + Y
Sbjct: 353 T-EDVKKFLRYNANKALMNLGYEALFPADATDVNPAILAALSPNADENHDFFSGSGSSYV 411
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 412 MGEVVDTEDEDWD 424
>gi|224475873|ref|YP_002633479.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
carnosus subsp. carnosus TM300]
gi|222420480|emb|CAL27294.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus
carnosus subsp. carnosus TM300]
Length = 324
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 7/119 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F ++ E + Q +L E E++Y H+ + A
Sbjct: 194 DESIHGVFTGLDAQHLRNELSENEKQRADQHMYKLLEELYKNEVSYTHKLYDDIGL---A 250
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
Y+++ N+ +G EP F+ E NP + +D + +FF + Y
Sbjct: 251 EDVLNYVRYNGNKALSNLGFEPYFEEREFNPI--IENALDTSTKNHDFFSVKGDGYTLA 307
>gi|16078802|ref|NP_389621.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
subtilis subsp. subtilis str. 168]
gi|221309618|ref|ZP_03591465.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
subtilis subsp. subtilis str. 168]
gi|221313941|ref|ZP_03595746.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
subtilis subsp. subtilis str. NCIB 3610]
gi|221318864|ref|ZP_03600158.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
subtilis subsp. subtilis str. JH642]
gi|221323136|ref|ZP_03604430.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
subtilis subsp. subtilis str. SMY]
gi|321315508|ref|YP_004207795.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
subtilis BSn5]
gi|1710395|sp|P50621|RIR2_BACSU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
AltName: Full=Ribonucleotide reductase small subunit
gi|1154633|emb|CAA92811.1| NrdF [Bacillus subtilis subsp. subtilis str. 168]
gi|2634123|emb|CAB13623.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus
subtilis subsp. subtilis str. 168]
gi|116733911|gb|ABK20014.1| ribonucleotide-diphosphate reductase beta [synthetic construct]
gi|291484287|dbj|BAI85362.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
subtilis subsp. natto BEST195]
gi|320021782|gb|ADV96768.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
subtilis BSn5]
Length = 329
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +I + E ++ + +L++ E+ Y + + +
Sbjct: 195 LRDEAIHGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQLYENELEYTEDLYDQVGL-- 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
+ ++++++ AN+ +G +P F+ + NP + ++ K + +FF + Y++
Sbjct: 253 -SHDVKKFIRYNANKALMNLGFDPYFEEEDINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309
Query: 119 GAE--LKWD 125
LK D
Sbjct: 310 ATVEPLKDD 318
>gi|94990703|ref|YP_598803.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes MGAS10270]
gi|94544211|gb|ABF34259.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
pyogenes MGAS10270]
Length = 320
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 48/130 (36%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + F+ +L++ E Y VG
Sbjct: 189 IRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTKTLY--DGVGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 247 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 304
Query: 118 QGA--ELKWD 125
G+ + D
Sbjct: 305 LGSVEAMSDD 314
>gi|19746348|ref|NP_607484.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes MGAS8232]
gi|50914444|ref|YP_060416.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes MGAS10394]
gi|71903783|ref|YP_280586.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes MGAS6180]
gi|94994624|ref|YP_602722.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes MGAS10750]
gi|139473584|ref|YP_001128300.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes str. Manfredo]
gi|19748543|gb|AAL97983.1| ribonucleotide diphosphate reductase small subunit [Streptococcus
pyogenes MGAS8232]
gi|50903518|gb|AAT87233.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
pyogenes MGAS10394]
gi|71802878|gb|AAX72231.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
pyogenes MGAS6180]
gi|94548132|gb|ABF38178.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
pyogenes MGAS10750]
gi|134271831|emb|CAM30066.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptococcus pyogenes str. Manfredo]
Length = 319
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 48/130 (36%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + F+ +L++ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTKTLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGA--ELKWD 125
G+ + D
Sbjct: 304 LGSVEAMSDD 313
>gi|15675308|ref|NP_269482.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes M1 GAS]
gi|21910586|ref|NP_664854.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes MGAS315]
gi|28895723|ref|NP_802073.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes SSI-1]
gi|71910937|ref|YP_282487.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes MGAS5005]
gi|94988801|ref|YP_596902.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes MGAS9429]
gi|94992686|ref|YP_600785.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes MGAS2096]
gi|306826388|ref|ZP_07459706.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes ATCC 10782]
gi|13622486|gb|AAK34203.1| ribonucleotide diphosphate reductase small subunit [Streptococcus
pyogenes M1 GAS]
gi|21904787|gb|AAM79657.1| putative ribonucleoside-diphosphate reductase 2 beta subunit
[Streptococcus pyogenes MGAS315]
gi|28810972|dbj|BAC63906.1| putative ribonucleotide diphosphate reductase, small subunit
[Streptococcus pyogenes SSI-1]
gi|71853719|gb|AAZ51742.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
pyogenes MGAS5005]
gi|94542309|gb|ABF32358.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
pyogenes MGAS9429]
gi|94546194|gb|ABF36241.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
pyogenes MGAS2096]
gi|304431419|gb|EFM34410.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes ATCC 10782]
Length = 319
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 48/130 (36%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + F+ +L++ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTKTLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGA--ELKWD 125
G+ + D
Sbjct: 304 LGSVEAMSDD 313
>gi|319645694|ref|ZP_07999925.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus sp.
BT1B_CT2]
gi|317392241|gb|EFV73037.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus sp.
BT1B_CT2]
Length = 330
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +I + + + +++ E EIAY E VGL
Sbjct: 198 IRDEAIHGVYVGLLAQEIYNKKDEGTQHRLEMFALSLIEELYRNEIAYTEELY--DQVGL 255
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
++++++ N+ +G P F+ E NP + ++ K + +FF + Y++
Sbjct: 256 THD-VKKFIRYNGNKALSNLGFNPYFEEEEINPI--VLNGLNTKTKSHDFFSMKGNGYKK 312
Query: 119 GAE--LKWD 125
LK D
Sbjct: 313 ATVEPLKDD 321
>gi|323127635|gb|ADX24932.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
Length = 319
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + F++ +L++ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQETFREWMYDLLYQLYENEEDYTKSLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGA--ELKWD 125
G+ + D
Sbjct: 304 LGSVEAMSDD 313
>gi|261885428|ref|ZP_06009467.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
fetus subsp. venerealis str. Azul-94]
Length = 282
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE HL ++IN ++ E P L+T E + K M +A LEI + +G
Sbjct: 217 RDEITHLLLFQNMINSVRKERPDLFTSEVEAKIYEMFKKAGDLEIEWGKYITGNQIMGFT 276
Query: 62 APSCEQ 67
E+
Sbjct: 277 DDIIEE 282
>gi|239636654|ref|ZP_04677656.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
warneri L37603]
gi|239598009|gb|EEQ80504.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
warneri L37603]
gi|330683860|gb|EGG95634.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
epidermidis VCU121]
Length = 324
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 7/119 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F ++ E + Q+ +L E E++Y H + A
Sbjct: 194 DESIHGVFTGLDAQSLRNELSESEKQRADQEMYKLLKELYDNEVSYTHLLYDDIGL---A 250
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
Y+++ N+ +G EP F+ E NP + +D + +FF + Y
Sbjct: 251 EDVLNYVKYNGNKALSNLGFEPYFEEREFNPI--IENALDTTTKNHDFFSVKGDGYTLA 307
>gi|290992332|ref|XP_002678788.1| predicted protein [Naegleria gruberi]
gi|284092402|gb|EFC46044.1| predicted protein [Naegleria gruberi]
Length = 330
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 10/108 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H NF + + +K +K Q +++ EA +E + ++P + L+
Sbjct: 206 RDEEFHSNFLYSLYSNLK------HSKLPQTLVHSLVKEAVDIEKEFIT-SLPTELIELD 258
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 109
S QY++ +++ G E LF +TEN W+ +++ + FF
Sbjct: 259 RNSMYQYVEVVSDNILISFGYEKLF-HTENQCSWIQDMLM--NKSGFF 303
>gi|322412098|gb|EFY03006.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
Length = 319
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + F++ +L++ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQETFREWMYDLLYQLYENEEDYTKTLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGA--ELKWD 125
G+ + D
Sbjct: 304 LGSVEAMSDD 313
>gi|300870141|ref|YP_003785012.1| ribonucleotide-diphosphate reductase subunit beta [Brachyspira
pilosicoli 95/1000]
gi|300687840|gb|ADK30511.1| ribonucleotide-diphosphate reductase beta subunit [Brachyspira
pilosicoli 95/1000]
Length = 359
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 10/132 (7%)
Query: 3 DE-SLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLLEIAYAHETM-PK 55
DE + H+ G +VI ++ + + + F ++ M EI +A K
Sbjct: 227 DELNTHVPTGKNVIGILRKDANQGFKELFDSGWYNDMAKEMTEFTVNEEIKWAKYLFDGK 286
Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETR 112
G+N+ E ++++ A R +G+E + + + W + D+ K+ ET
Sbjct: 287 EVSGINSSVSEHFIKYWAGVRLKDLGVETEYLKEPKSDIIDWFNAYRDINKQNAALQETT 346
Query: 113 VTEYQQGAELKW 124
T YQ+GA
Sbjct: 347 NTSYQKGALKND 358
>gi|254505962|ref|ZP_05118107.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
parahaemolyticus 16]
gi|219551185|gb|EED28165.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
parahaemolyticus 16]
Length = 323
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 51/134 (38%), Gaps = 13/134 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + E + + ++ +++ +E Y VGL
Sbjct: 193 IRDEAIHGYYIGYKFQLAFNELSQQEQAKVKDEAYSLMFSLYEIESQYTESLY--DQVGL 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVI-DLKKEKNFFETRVTEY 116
+ ++ + AN+ +G EPLF NP M+ + + + +FF + Y
Sbjct: 251 T-EDVKHFLHYNANKALMNLGFEPLFPDELCQVNPAI-MAALSPNADENHDFFSGSGSSY 308
Query: 117 QQGAEL-----KWD 125
G + WD
Sbjct: 309 VIGKAVATEDEDWD 322
>gi|296127719|ref|YP_003634971.1| ribonucleotide reductase [Brachyspira murdochii DSM 12563]
gi|296019535|gb|ADG72772.1| ribonucleotide reductase [Brachyspira murdochii DSM 12563]
Length = 357
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 10/132 (7%)
Query: 3 DE-SLHLNFGIDVINQIKIE----NPHLWTKE-FQQKSRTMLHEATLLEIAYAHETM-PK 55
DE ++H+ G +++ ++ E HL+ F +R M EI +A K
Sbjct: 225 DELNVHVPTGKNLMTILRKEAHQGFSHLFKNGWFYDTARAMTEYTVNEEIKWAKYLFDGK 284
Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEKNF-FETR 112
G+N+ E ++++ A R I +E + + + W + D+ K+ ET
Sbjct: 285 EVSGINSSVSEHFIKYWAGIRLKDIDVETEYLSEKKSDIIDWFNSYRDINKQNAALQETT 344
Query: 113 VTEYQQGAELKW 124
T YQ+GA
Sbjct: 345 NTSYQKGALKND 356
>gi|251782830|ref|YP_002997133.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
gi|242391460|dbj|BAH81919.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
Length = 319
Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + F++ +L++ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQETFREWMYDLLYQLYENEENYTKSLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGA--ELKWD 125
G+ + D
Sbjct: 304 LGSVEAMSDD 313
>gi|322372696|ref|ZP_08047232.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
sp. C150]
gi|321277738|gb|EFX54807.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
sp. C150]
Length = 319
Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + F++ +L+E E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQESFREWMYDLLYELYENEELYTKSLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF + NP M+ + +FF Y
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDSANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGA--ELKWD 125
G ++ D
Sbjct: 304 LGTVEAMQDD 313
>gi|269121363|ref|YP_003309540.1| ribonucleoside-diphosphate reductase [Sebaldella termitidis ATCC
33386]
gi|268615241|gb|ACZ09609.1| Ribonucleoside-diphosphate reductase [Sebaldella termitidis ATCC
33386]
Length = 331
Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 52/119 (43%), Gaps = 7/119 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F + + + + ++ + +++ E+ Y E +
Sbjct: 197 DESIHGVFVGLLAQEFFKKFTPEDQQRIEKNLKELMYVLYENELKYTDE---VYTEIGLS 253
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
++Y+++ AN+ +G + F+ E NP + ++++ + +FF + T Y++
Sbjct: 254 GDVKEYIRYNANKALMNLGFDEEFEVKEVNPI--VLNGLNVETTQHDFFSKKSTNYEKA 310
>gi|56808544|ref|ZP_00366279.1| COG0208: Ribonucleotide reductase, beta subunit [Streptococcus
pyogenes M49 591]
gi|209559615|ref|YP_002286087.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes NZ131]
gi|209540816|gb|ACI61392.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
[Streptococcus pyogenes NZ131]
Length = 319
Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 48/130 (36%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + F+ +L++ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTKTLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGA--ELKWD 125
G+ + D
Sbjct: 304 LGSVEAMSDD 313
>gi|257870055|ref|ZP_05649708.1| ribonucleoside-diphosphate reductase [Enterococcus gallinarum EG2]
gi|257804219|gb|EEV33041.1| ribonucleoside-diphosphate reductase [Enterococcus gallinarum EG2]
Length = 322
Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + + +L+E E Y E +G
Sbjct: 189 IRDESVHGTYIGYKFQLGFNELPEEEQQRLKDWMYDLLYELYENEERYTEELY--DAIGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 247 T-EEVKTFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 304
Query: 118 QGA--ELKWD 125
G +K D
Sbjct: 305 LGTVEAMKDD 314
>gi|311993498|ref|YP_004010363.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage Acj9]
gi|295917455|gb|ADG60126.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage Acj9]
Length = 379
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 45/122 (36%), Gaps = 7/122 (5%)
Query: 2 RDESLHLNFGIDVINQIKIE----NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LH ++ Q+ E + ++ + E E A+A
Sbjct: 231 RDENLHHQGTRYILQQMNKGIDGTEWREIALECKAEAEELFIEVRNQERAWASYVYRDGC 290
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEKNF-FETRVT 114
GL ++ + + +GL P+ + +P PW+++ + + E ++
Sbjct: 291 PPGLTVELVHDFIDYQLVPAMNNVGLTCPVQRPKRHPLPWVNKYLMASSVQVAKQEAELS 350
Query: 115 EY 116
Y
Sbjct: 351 SY 352
>gi|50404173|gb|AAT76849.1| ribonucleotide reductase small subunit [Plasmodium falciparum]
Length = 324
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 8/94 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N HL K + A LE ++ E + + +
Sbjct: 204 RDEYLHGDFSVMCCN-------HLVNKLKYEHVLDYFKMAVDLEYQFSLEMLELNVLKIK 256
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95
+++++ + + + ++ PF W
Sbjct: 257 KEQVRAFLEYLTDTMLTNLKYPKHYN-SKYPFSW 289
>gi|258597037|ref|XP_001347439.2| ribonucleotide reductase small subunit, putative [Plasmodium
falciparum 3D7]
gi|254922415|gb|AAN35352.2| ribonucleotide reductase small subunit, putative [Plasmodium
falciparum 3D7]
Length = 335
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 8/94 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N HL K + A LE ++ E + + +
Sbjct: 215 RDEYLHGDFSVMCCN-------HLVNKLKYEHVLDYFKMAVDLEYQFSLEMLELNVLKIK 267
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95
+++++ + + + ++ PF W
Sbjct: 268 KEQVRAFLEYLTDTMLTNLKYPKHYN-SKYPFSW 300
>gi|296117839|ref|ZP_06836422.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
ammoniagenes DSM 20306]
gi|295969070|gb|EFG82312.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
ammoniagenes DSM 20306]
Length = 328
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + N Q + +L + E + +G
Sbjct: 199 IRDEAIHGYYIGYKYQNYLK-NDKARHAANQDEIVDLLLDLYDNESHFTEAVY--DQIGW 255
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEV-IDLKKEKNFFETRVTEYQ 117
+ ++++ AN+ + +G E +F E F M+ + + +FF + Y
Sbjct: 256 T-EDVKAFLRYNANKAMNNLGYEAIFPQEECKFNAGVMTSLDPSANENHDFFSGSGSSYV 314
Query: 118 --QGAELKWD 125
+ E D
Sbjct: 315 IGKAEETTDD 324
>gi|149392653|gb|ABR26129.1| ribonucleoside-diphosphate reductase small chain [Oryza sativa
Indica Group]
Length = 233
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
RDE LH +F + + ++ + + + ++ +A +E + + +P VG
Sbjct: 183 RDEGLHCDFACLLYDLLRGKLDE-------SRVQEIVADAVDIEREFVCDALPVALVG 233
>gi|27467432|ref|NP_764069.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
epidermidis ATCC 12228]
gi|57866341|ref|YP_187991.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
epidermidis RP62A]
gi|251810165|ref|ZP_04824638.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
epidermidis BCM-HMP0060]
gi|282875687|ref|ZP_06284558.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
epidermidis SK135]
gi|293368193|ref|ZP_06614822.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
epidermidis M23864:W2(grey)]
gi|27314975|gb|AAO04111.1|AE016745_210 ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
epidermidis ATCC 12228]
gi|57636999|gb|AAW53787.1| ribonucleoside-diphosphate reductase 2, beta subunit
[Staphylococcus epidermidis RP62A]
gi|251806217|gb|EES58874.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
epidermidis BCM-HMP0060]
gi|281295714|gb|EFA88237.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
epidermidis SK135]
gi|291317616|gb|EFE58033.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
epidermidis M23864:W2(grey)]
gi|329723280|gb|EGG59810.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
epidermidis VCU144]
gi|329736749|gb|EGG73014.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
epidermidis VCU028]
gi|329737954|gb|EGG74178.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
epidermidis VCU045]
Length = 322
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 48/119 (40%), Gaps = 7/119 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F ++ E ++ Q+ +L+E E++Y H + A
Sbjct: 194 DESIHGVFTGLDAQSLRNELSESEKQKADQEMYKLLNELYDNEVSYTHLLYDDIGL---A 250
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
Y+++ N+ +G EP F+ E NP + +D + +FF + Y
Sbjct: 251 EDVLNYVRYNGNKALSNLGFEPYFEEREFNPI--IENALDTSTKNHDFFSVKGDGYTLA 307
>gi|304406354|ref|ZP_07388010.1| Ribonucleoside-diphosphate reductase [Paenibacillus curdlanolyticus
YK9]
gi|304344412|gb|EFM10250.1| Ribonucleoside-diphosphate reductase [Paenibacillus curdlanolyticus
YK9]
Length = 318
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 44/124 (35%), Gaps = 15/124 (12%)
Query: 1 MRDESLHL----NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
+RDES+H +V + E E ++ + +
Sbjct: 190 LRDESIHGLYVGVLAQEVYRDLTPEERGEADTELRELIDRLHANEEVYTKELYSGV---- 245
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVT 114
A Y+++ N+ +GL+P+F E NP + I + ++ +FF +
Sbjct: 246 ---GLADEVLTYVRYNCNKGLMNLGLDPIFPEEEINPIVF--NGISTRTKQHDFFSKKGN 300
Query: 115 EYQQ 118
Y +
Sbjct: 301 GYVR 304
>gi|242242101|ref|ZP_04796546.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
epidermidis W23144]
gi|242234414|gb|EES36726.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
epidermidis W23144]
gi|319401190|gb|EFV89405.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
epidermidis FRI909]
Length = 322
Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 48/119 (40%), Gaps = 7/119 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F ++ E ++ Q+ +L+E E++Y H + A
Sbjct: 194 DESIHGVFTGLDAQSLRNELSESEKQKADQEMYKLLNELYDNEVSYTHLLYDDIGL---A 250
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
Y+++ N+ +G EP F+ E NP + +D + +FF + Y
Sbjct: 251 DDVLNYVRYNGNKALSNLGFEPYFEEREFNPI--IENALDTSTKNHDFFSVKGDGYTLA 307
>gi|308068541|ref|YP_003870146.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
reductase small subunit) [Paenibacillus polymyxa E681]
gi|305857820|gb|ADM69608.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
reductase small subunit) [Paenibacillus polymyxa E681]
Length = 321
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 5/120 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + +I E ++ Q +L E Y +
Sbjct: 191 LRDESIHGVYVGVLAQEIYAELAEEEQRDLYQTLVGLLRYLHNNEEQYTEQI---YTPIG 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ ++++ AN+ +G +PLF+ E NP + + + K+ +FF + Y +
Sbjct: 248 LVDDVKVFLRYNANKAMMNLGFDPLFEEEEVNPIVF-NGISTHTKQHDFFSKKGNGYVRA 306
>gi|293374706|ref|ZP_06621014.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter
sanguinis PC909]
gi|325840602|ref|ZP_08167083.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter
sp. HGF1]
gi|292646620|gb|EFF64622.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter
sanguinis PC909]
gi|325490251|gb|EGC92584.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter
sp. HGF1]
Length = 321
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 9/127 (7%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE LH Q+ E + +Q++ M+ E +E+ Y+ +
Sbjct: 191 LRDEKLHTVGVGFFAQQLLSEFDESIQAKLKQQAVEMMQEIYEVEVEYSKVLYENLDMI- 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116
Y+Q+ N + L PLF E NP + I + + +FF T+ Y
Sbjct: 250 --DDVVSYIQYNVNYALQCLNLNPLFDIVESDINPI--VLNGISTETKNHDFFSTKGNGY 305
Query: 117 QQGAELK 123
+ +++
Sbjct: 306 IKTTKVE 312
>gi|154686152|ref|YP_001421313.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
amyloliquefaciens FZB42]
gi|154352003|gb|ABS74082.1| NrdF [Bacillus amyloliquefaciens FZB42]
Length = 329
Score = 51.1 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +I + E ++ + +L++ E+ Y + + +
Sbjct: 195 LRDEAIHGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQLYENELEYTEDLYDQVGL-- 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
+ ++++++ AN+ +G +P F+ + NP + ++ K + +FF + Y++
Sbjct: 253 -SHDVKKFIRYNANKALMNLGFDPYFEEEDINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309
Query: 119 GAE 121
Sbjct: 310 ATV 312
>gi|37525251|ref|NP_928595.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|36784678|emb|CAE13578.1| ribonucleoside-diphosphate reductase 2 beta chain (ribonucleotide
reductase 2) (R2f protein) [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 319
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q ++ L KE ++ + ++L E EI Y E VG
Sbjct: 189 IRDEAIHGYYIGYKFQQSLKKHSTLEQKEIKEFTFSLLLELYENEIKYTEELY--DIVGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVI--DLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF N P + + + + +FF + Y
Sbjct: 247 T-EDIKKFLHYNANKALMNLGYETLFPPEITNVSPTILSALSPNANENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G +
Sbjct: 306 IGKAVN 311
>gi|46143780|ref|ZP_00134247.2| COG0208: Ribonucleotide reductase, beta subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
Length = 336
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE LHL +++N I ++P + +E +Q++ + A E +A
Sbjct: 237 RDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQEKEWAAYLFKDGS 296
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLF 86
+GLN +Y+++I N R +GL F
Sbjct: 297 MIGLNEDILVKYVEYITNIRMQAVGLPRPF 326
>gi|312883652|ref|ZP_07743377.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309368875|gb|EFP96402.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 323
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 13/134 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + E ++ + K+ ++L +E Y VGL
Sbjct: 193 IRDEAIHGYYIGYKFQLGYQELDEARQEQLKDKAYSLLLSLYDIECQYTESLY--DQVGL 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVI-DLKKEKNFFETRVTEY 116
+ ++ + AN+ +G E LF NP M+ + + + +FF + Y
Sbjct: 251 T-EDVKHFLHYNANKALMNLGFEALFPQELCNVNPAI-MAALSPNSDENHDFFSGSGSSY 308
Query: 117 QQGAEL-----KWD 125
G + WD
Sbjct: 309 VIGKAVVTEDEDWD 322
>gi|226312721|ref|YP_002772615.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacillus
brevis NBRC 100599]
gi|226095669|dbj|BAH44111.1| ribonucleoside-diphosphate reductase beta chain [Brevibacillus
brevis NBRC 100599]
Length = 316
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 7/120 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + ++ + ++ +LHE E AY
Sbjct: 188 VRDESIHGLYVGVLAQEVYQGLSVVEQTAAIEELYALLHELQENEEAYTTSL---YTEIG 244
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
A Y+++ AN+ +GL+PLF E NP + I + ++ +FF + Y +
Sbjct: 245 LADEVHAYVRYNANKALMNLGLDPLFPEEEVNPI--VLNGIRTQTKQHDFFSKKGNGYVR 302
>gi|25027435|ref|NP_737489.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
efficiens YS-314]
gi|259506419|ref|ZP_05749321.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
[Corynebacterium efficiens YS-314]
gi|23492716|dbj|BAC17689.1| putative ribonucleotide reductase [Corynebacterium efficiens
YS-314]
gi|259165992|gb|EEW50546.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
[Corynebacterium efficiens YS-314]
Length = 339
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 48/133 (36%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + ++ +L + E+ Y +G
Sbjct: 209 IRDEAIHGYYIGYKYQKHIATLSPEKQATNHDEAVELLLDLYDNELEYTRHVYDD--LGW 266
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVI-DLKKEKNFFETRVTEYQ 117
+ ++++ AN+ +G E +F + F M+ + + +FF + Y
Sbjct: 267 -SEDVSAFLRYNANKAMQNLGYESIFPVDQCKFDPGVMTSLDPSSNENHDFFSGSGSSYV 325
Query: 118 QG-----AELKWD 125
G ++ WD
Sbjct: 326 IGDVEATSDEDWD 338
>gi|283786769|ref|YP_003366634.1| ribonucleoside-diphosphate reductase 2 beta chain [Citrobacter
rodentium ICC168]
gi|282950223|emb|CBG89859.1| ribonucleoside-diphosphate reductase 2 beta chain [Citrobacter
rodentium ICC168]
Length = 319
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + P ++ + + +L E E+ Y E
Sbjct: 189 IRDEAVHGYYIGYKYQKGMEKLPDAAREDLKNFALDLLMELYDNEVRYTEELYADTG--- 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+A + ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 246 HAEDVQAFLCYNANKAMMNLGYEALFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|294669616|ref|ZP_06734683.1| hypothetical protein NEIELOOT_01517 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308529|gb|EFE49772.1| hypothetical protein NEIELOOT_01517 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 81
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-FETRVT 114
+GLN QY+++I N R +GL F+ T+NP PW++ + + E ++
Sbjct: 1 MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLSSDNVQVAPQEVEIS 60
Query: 115 EY---QQGAELKWD 125
Y Q +E+ D
Sbjct: 61 SYLIGQIDSEVSAD 74
>gi|260583950|ref|ZP_05851698.1| ribonucleoside-diphosphate reductase, beta subunit [Granulicatella
elegans ATCC 700633]
gi|260158576|gb|EEW93644.1| ribonucleoside-diphosphate reductase, beta subunit [Granulicatella
elegans ATCC 700633]
Length = 336
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + Q E P + + + E E+ Y VG
Sbjct: 205 IRDESVHGTYTGYKFQQGYNELPLEEQETLKMWVYQLCLELYQNEVKYTQSIY--DQVGW 262
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++++ AN+ +G +PLF T +P M+ + +FF Y
Sbjct: 263 T-EKVKVFIRYNANKALQNLGFDPLFPDTAEDVDPIV-MNGISTGTSNHDFFSQVGNGYL 320
Query: 118 QGA--ELKWD 125
G ++ D
Sbjct: 321 LGTVEAMEDD 330
>gi|69245952|ref|ZP_00603724.1| Ribonucleoside-diphosphate reductase [Enterococcus faecium DO]
gi|227552561|ref|ZP_03982610.1| Ribonucleoside-diphosphate reductase [Enterococcus faecium TX1330]
gi|257880353|ref|ZP_05660006.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
1,230,933]
gi|257882206|ref|ZP_05661859.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
1,231,502]
gi|257885400|ref|ZP_05665053.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
1,231,501]
gi|257888211|ref|ZP_05667864.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
1,141,733]
gi|257891012|ref|ZP_05670665.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
1,231,410]
gi|257894265|ref|ZP_05673918.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
1,231,408]
gi|257896901|ref|ZP_05676554.1| ribonucleoside-diphosphate reductase [Enterococcus faecium Com12]
gi|257899642|ref|ZP_05679295.1| ribonucleoside-diphosphate reductase [Enterococcus faecium Com15]
gi|258614695|ref|ZP_05712465.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
faecium DO]
gi|260562343|ref|ZP_05832857.1| ribonucleoside-diphosphate reductase [Enterococcus faecium C68]
gi|261209282|ref|ZP_05923674.1| ribonucleoside-diphosphate reductase [Enterococcus faecium TC 6]
gi|289567001|ref|ZP_06447402.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium D344SRF]
gi|293378468|ref|ZP_06624631.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium PC4.1]
gi|293553988|ref|ZP_06674590.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium E1039]
gi|293563177|ref|ZP_06677635.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium E1162]
gi|293568383|ref|ZP_06679704.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium E1071]
gi|293570828|ref|ZP_06681875.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium E980]
gi|294615274|ref|ZP_06695151.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium E1636]
gi|294617336|ref|ZP_06696975.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium E1679]
gi|294623134|ref|ZP_06702020.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium U0317]
gi|314939361|ref|ZP_07846602.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium TX0133a04]
gi|314941564|ref|ZP_07848449.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium TX0133C]
gi|314949609|ref|ZP_07852933.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium TX0082]
gi|314953716|ref|ZP_07856591.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium TX0133A]
gi|314992172|ref|ZP_07857616.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium TX0133B]
gi|314997663|ref|ZP_07862593.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium TX0133a01]
gi|68195482|gb|EAN09926.1| Ribonucleoside-diphosphate reductase [Enterococcus faecium DO]
gi|227178310|gb|EEI59282.1| Ribonucleoside-diphosphate reductase [Enterococcus faecium TX1330]
gi|257814581|gb|EEV43339.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
1,230,933]
gi|257817864|gb|EEV45192.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
1,231,502]
gi|257821256|gb|EEV48386.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
1,231,501]
gi|257824265|gb|EEV51197.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
1,141,733]
gi|257827372|gb|EEV53998.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
1,231,410]
gi|257830644|gb|EEV57251.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
1,231,408]
gi|257833466|gb|EEV59887.1| ribonucleoside-diphosphate reductase [Enterococcus faecium Com12]
gi|257837554|gb|EEV62628.1| ribonucleoside-diphosphate reductase [Enterococcus faecium Com15]
gi|260073267|gb|EEW61608.1| ribonucleoside-diphosphate reductase [Enterococcus faecium C68]
gi|260076828|gb|EEW64563.1| ribonucleoside-diphosphate reductase [Enterococcus faecium TC 6]
gi|289161202|gb|EFD09101.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium D344SRF]
gi|291588904|gb|EFF20731.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium E1071]
gi|291591871|gb|EFF23503.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium E1636]
gi|291596409|gb|EFF27663.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium E1679]
gi|291597503|gb|EFF28668.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium U0317]
gi|291601845|gb|EFF32095.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium E1039]
gi|291604868|gb|EFF34344.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium E1162]
gi|291609096|gb|EFF38371.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium E980]
gi|292642797|gb|EFF60944.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium PC4.1]
gi|313588298|gb|EFR67143.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium TX0133a01]
gi|313593275|gb|EFR72120.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium TX0133B]
gi|313594300|gb|EFR73145.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium TX0133A]
gi|313599623|gb|EFR78466.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium TX0133C]
gi|313641346|gb|EFS05926.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium TX0133a04]
gi|313644033|gb|EFS08613.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium TX0082]
Length = 321
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + + +L+E E Y E +G
Sbjct: 189 IRDESVHGTYIGYKFQLGFNELPEAEQETLKDWMYNLLYELYENEERYTEELY--DPIGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G++PLF T NP M+ + +FF
Sbjct: 247 T-EEVKTFLRYNANKALMNLGMDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296
>gi|315149360|gb|EFT93376.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0012]
Length = 321
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + + +L+E E Y E +G
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEERYTEELYDD--LGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++++ AN+ +G++PLF T NP M+ + +FF Y
Sbjct: 246 T-EEVKTFLRYNANKALMNLGMDPLFADTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGA--ELKWD 125
G +K D
Sbjct: 304 LGTVEAMKDD 313
>gi|29375101|ref|NP_814254.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
faecalis V583]
gi|227519132|ref|ZP_03949181.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
faecalis TX0104]
gi|227553836|ref|ZP_03983885.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
faecalis HH22]
gi|229547642|ref|ZP_04436367.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
faecalis TX1322]
gi|229548395|ref|ZP_04437120.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
faecalis ATCC 29200]
gi|255971023|ref|ZP_05421609.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T1]
gi|255973536|ref|ZP_05424122.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T2]
gi|256617388|ref|ZP_05474234.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis ATCC
4200]
gi|256761391|ref|ZP_05501971.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T3]
gi|256852443|ref|ZP_05557819.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
faecalis T8]
gi|256957628|ref|ZP_05561799.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis DS5]
gi|256959663|ref|ZP_05563834.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis Merz96]
gi|256963238|ref|ZP_05567409.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis
HIP11704]
gi|257080134|ref|ZP_05574495.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis JH1]
gi|257080866|ref|ZP_05575227.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis E1Sol]
gi|257083550|ref|ZP_05577911.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis Fly1]
gi|257085823|ref|ZP_05580184.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis D6]
gi|257088966|ref|ZP_05583327.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis CH188]
gi|257415187|ref|ZP_05592181.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis
AR01/DG]
gi|257418242|ref|ZP_05595236.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T11]
gi|257420749|ref|ZP_05597739.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
faecalis X98]
gi|293384855|ref|ZP_06630698.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis R712]
gi|293389145|ref|ZP_06633612.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis S613]
gi|294780704|ref|ZP_06746065.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis PC1.1]
gi|300861776|ref|ZP_07107856.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TUSoD Ef11]
gi|307272281|ref|ZP_07553541.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0855]
gi|307275556|ref|ZP_07556697.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX2134]
gi|307282794|ref|ZP_07562994.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0860]
gi|307288831|ref|ZP_07568809.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0109]
gi|307290616|ref|ZP_07570524.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0411]
gi|312900212|ref|ZP_07759524.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0470]
gi|312904832|ref|ZP_07763972.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0635]
gi|312908153|ref|ZP_07767131.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis DAPTO 512]
gi|312952106|ref|ZP_07770987.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0102]
gi|312979089|ref|ZP_07790804.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis DAPTO 516]
gi|29342560|gb|AAO80325.1| ribonucleoside-diphosphate reductase 2, beta subunit [Enterococcus
faecalis V583]
gi|227073409|gb|EEI11372.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
faecalis TX0104]
gi|227177089|gb|EEI58061.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
faecalis HH22]
gi|229306611|gb|EEN72607.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
faecalis ATCC 29200]
gi|229307134|gb|EEN73121.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
faecalis TX1322]
gi|255962041|gb|EET94517.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T1]
gi|255966408|gb|EET97030.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T2]
gi|256596915|gb|EEU16091.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis ATCC
4200]
gi|256682642|gb|EEU22337.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T3]
gi|256712297|gb|EEU27329.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
faecalis T8]
gi|256948124|gb|EEU64756.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis DS5]
gi|256950159|gb|EEU66791.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis Merz96]
gi|256953734|gb|EEU70366.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis
HIP11704]
gi|256988164|gb|EEU75466.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis JH1]
gi|256988896|gb|EEU76198.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis E1Sol]
gi|256991580|gb|EEU78882.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis Fly1]
gi|256993853|gb|EEU81155.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis D6]
gi|256997778|gb|EEU84298.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis CH188]
gi|257157015|gb|EEU86975.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis
ARO1/DG]
gi|257160070|gb|EEU90030.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T11]
gi|257162573|gb|EEU92533.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
faecalis X98]
gi|291077859|gb|EFE15223.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis R712]
gi|291081516|gb|EFE18479.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis S613]
gi|294452314|gb|EFG20755.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis PC1.1]
gi|295114163|emb|CBL32800.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Enterococcus sp. 7L76]
gi|300848301|gb|EFK76058.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TUSoD Ef11]
gi|306498330|gb|EFM67839.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0411]
gi|306500300|gb|EFM69639.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0109]
gi|306503650|gb|EFM72881.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0860]
gi|306507661|gb|EFM76790.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX2134]
gi|306511170|gb|EFM80180.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0855]
gi|310625861|gb|EFQ09144.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis DAPTO 512]
gi|310629888|gb|EFQ13171.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0102]
gi|310631838|gb|EFQ15121.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0635]
gi|311288123|gb|EFQ66679.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis DAPTO 516]
gi|311292573|gb|EFQ71129.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0470]
gi|315026267|gb|EFT38199.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX2137]
gi|315028520|gb|EFT40452.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX4000]
gi|315032246|gb|EFT44178.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0017]
gi|315035532|gb|EFT47464.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0027]
gi|315143982|gb|EFT87998.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX2141]
gi|315146930|gb|EFT90946.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX4244]
gi|315155004|gb|EFT99020.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0043]
gi|315158779|gb|EFU02796.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0312]
gi|315161036|gb|EFU05053.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0645]
gi|315166222|gb|EFU10239.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX1302]
gi|315167729|gb|EFU11746.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX1341]
gi|315170811|gb|EFU14828.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX1342]
gi|315173869|gb|EFU17886.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX1346]
gi|315574921|gb|EFU87112.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0309B]
gi|315576500|gb|EFU88691.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0630]
gi|315582368|gb|EFU94559.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0309A]
gi|327534208|gb|AEA93042.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
faecalis OG1RF]
Length = 321
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + + +L+E E Y E +G
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEERYTEELYDD--LGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++++ AN+ +G++PLF T NP M+ + +FF Y
Sbjct: 246 T-EEVKTFLRYNANKALMNLGMDPLFADTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGA--ELKWD 125
G +K D
Sbjct: 304 LGTVEAMKDD 313
>gi|70946075|ref|XP_742789.1| ribonucleotide reductase small subunit [Plasmodium chabaudi
chabaudi]
gi|56521965|emb|CAH76799.1| ribonucleotide reductase small subunit, putative [Plasmodium
chabaudi chabaudi]
Length = 211
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE L +F + N HL K + A LE + E + + +
Sbjct: 91 RDEYLQGDFSVMCCN-------HLNNKLKYENVLDYFKTAVDLEYNFCVEMLDFDSLKIT 143
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW--MSEVIDLKKEKN 107
+Q++Q++A+ + + ++ PF W S++I + KN
Sbjct: 144 KDQVKQFLQYLADTMLVNLKYSKHYN-SKYPFTWKEFSKIIVSENAKN 190
>gi|315153942|gb|EFT97958.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX0031]
Length = 321
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + + +L+E E Y E +G
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEERYTEELYDD--LGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++++ AN+ +G++PLF T NP M+ + +FF Y
Sbjct: 246 T-EEVKTFLRYNANKALMNLGMDPLFADTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGA--ELKWD 125
G +K D
Sbjct: 304 LGTVEAMKDD 313
>gi|307268568|ref|ZP_07549940.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX4248]
gi|306515057|gb|EFM83600.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis TX4248]
Length = 321
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + + +L+E E Y E +G
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEERYTEELYDD--LGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++++ AN+ +G++PLF T NP M+ + +FF Y
Sbjct: 246 T-EEVKTFLRYNANKALMNLGMDPLFADTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGA--ELKWD 125
G +K D
Sbjct: 304 LGTVEAMKDD 313
>gi|327493647|gb|AEA86506.1| Ribonucleotide reductase, small subunit [Campylobacter phage
NCTC12673]
Length = 378
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 52/130 (40%), Gaps = 8/130 (6%)
Query: 3 DESLHLNFGIDVINQIKIE----NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GF 57
DE +HL ++ ++ E HL+ +K+R + + E+ +A +
Sbjct: 222 DEDIHLVIFSFILKTLRSEQHQGFSHLFDDSLSRKARKIAKKVYQDELEWAKYLLSMGPI 281
Query: 58 VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKNF-FETRVTE 115
GL + + +++F + R + G +P++ + E+ ++ E E
Sbjct: 282 PGLTIENIDGFLKFFVDDRLKKCGFQPIWNAPKTDLVKEFQEIKNISSENQMLQEVDSIT 341
Query: 116 YQQGAELKWD 125
Y + +K D
Sbjct: 342 YSK-GVMKKD 350
>gi|323479608|gb|ADX79047.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecalis 62]
Length = 321
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + + +L+E E Y E +G
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEEHYTEELYDD--LGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++++ AN+ +G++PLF T NP M+ + +FF Y
Sbjct: 246 T-EEVKTFLRYNANKALMNLGMDPLFADTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGA--ELKWD 125
G +K D
Sbjct: 304 LGTVEAMKDD 313
>gi|73663294|ref|YP_302075.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|72495809|dbj|BAE19130.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 322
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 7/119 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F ++ E + Q+ +L + E+AY H + A
Sbjct: 194 DESIHGVFTGMDAQSLRNELSESEKLQADQEMYKLLDDLYKNEVAYTHSLYDDIGL---A 250
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
Y+++ N+ +G +P F+ E NP + +D + +FF + Y
Sbjct: 251 EDVLNYVRYNGNKALSNLGFDPYFEEREFNPI--IENALDTTTKNHDFFSVKGDGYTLA 307
>gi|22536982|ref|NP_687833.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
agalactiae 2603V/R]
gi|25010891|ref|NP_735286.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
agalactiae NEM316]
gi|76788606|ref|YP_329564.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
agalactiae A909]
gi|76799231|ref|ZP_00781405.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
agalactiae 18RS21]
gi|77405557|ref|ZP_00782648.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
agalactiae H36B]
gi|77408849|ref|ZP_00785576.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
agalactiae COH1]
gi|77413113|ref|ZP_00789313.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
agalactiae 515]
gi|22533837|gb|AAM99705.1|AE014229_6 ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
agalactiae 2603V/R]
gi|23095270|emb|CAD46480.1| Unknown [Streptococcus agalactiae NEM316]
gi|76563663|gb|ABA46247.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
agalactiae A909]
gi|76585414|gb|EAO61998.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
agalactiae 18RS21]
gi|77160814|gb|EAO71925.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
agalactiae 515]
gi|77172535|gb|EAO75677.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
agalactiae COH1]
gi|77175864|gb|EAO78642.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
agalactiae H36B]
gi|319744839|gb|EFV97177.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
agalactiae ATCC 13813]
Length = 319
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 7/124 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + F+ +L++ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTKTLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGAE 121
G+
Sbjct: 304 LGSV 307
>gi|325989612|ref|YP_004249311.1| ribonucleoside-diphosphate reductase beta chain [Mycoplasma suis
KI3806]
gi|323574697|emb|CBZ40353.1| Ribonucleoside-diphosphate reductase beta chain [Mycoplasma suis]
Length = 330
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 56/127 (44%), Gaps = 9/127 (7%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVG 59
+RDE++H + ++ +++ ++ +++ ++L E EI Y + P VG
Sbjct: 200 IRDEAIHGLYIGNLASKLFSTFDSEKQEKLKKQVYSLLEELMENEIEYTEKIYSPINLVG 259
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEY 116
Q++++ AN+ + LE + TE NP + K +FF T+ Y
Sbjct: 260 ----EVIQFLKYNANKALQNLDLEEKYDVTENDINPMIFNGLNTSTKNH-DFFSTKGNGY 314
Query: 117 QQGAELK 123
+ ++
Sbjct: 315 IKTTHVE 321
>gi|77410697|ref|ZP_00787056.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
agalactiae CJB111]
gi|77163233|gb|EAO74185.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
agalactiae CJB111]
Length = 319
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 7/124 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + F+ +L++ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTKTLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGAE 121
G+
Sbjct: 304 LGSV 307
>gi|120403054|ref|YP_952883.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
vanbaalenii PYR-1]
gi|119955872|gb|ABM12877.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Mycobacterium vanbaalenii PYR-1]
Length = 324
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y + + +
Sbjct: 194 IRDEAVHGYYIGYKFQKGLALESEATRQELKDYTYELLFELYDNEVEYTQDLYDEVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 252 -TEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 311 IGKAVNTEDEDWD 323
>gi|258423381|ref|ZP_05686272.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus A9635]
gi|257846442|gb|EEV70465.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus A9635]
Length = 323
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F ++ E ++ Q+ +L++ L E +Y +
Sbjct: 194 DESIHGVFTGLDAQHLRNELSESEKQKADQEMYKLLNDLYLNEESYTKMLYDDLGI---T 250
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG- 119
Y+++ N+ +G EP F+ E NP + +D + +FF + Y
Sbjct: 251 EDVLNYVKYNGNKALSNLGFEPYFEEREFNPI--IENALDTTTKNHDFFSVKGDGYVLAL 308
Query: 120 --AELKWD 125
L+ D
Sbjct: 309 NVEALQDD 316
>gi|309786253|ref|ZP_07680881.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
dysenteriae 1617]
gi|308925998|gb|EFP71477.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
dysenteriae 1617]
Length = 301
Score = 50.3 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 168 IRDEAVHGYYIGYKYQKSLEKISEAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 225
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 226 -ADDVKTFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSSSSYV 284
Query: 118 QGAELK 123
G ++
Sbjct: 285 MGKAVE 290
>gi|312862767|ref|ZP_07723007.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
vestibularis F0396]
gi|322516573|ref|ZP_08069487.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
vestibularis ATCC 49124]
gi|311101627|gb|EFQ59830.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
vestibularis F0396]
gi|322124843|gb|EFX96267.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
vestibularis ATCC 49124]
Length = 320
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + F++ +L++ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQESFREWMYDLLYQLYENEELYTKSLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF + NP M+ + +FF Y
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDSANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGA--ELKWD 125
G ++ D
Sbjct: 304 LGTVEAMQDD 313
>gi|289705575|ref|ZP_06501967.1| ribonucleoside-diphosphate reductase, beta subunit [Micrococcus
luteus SK58]
gi|289557804|gb|EFD51103.1| ribonucleoside-diphosphate reductase, beta subunit [Micrococcus
luteus SK58]
Length = 323
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 49/122 (40%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + P +E + + +L E E+ Y H+ +
Sbjct: 193 IRDEAVHGYYIGYKYQRSIETLPEEKREELKAFTFELLFELYENEVEYTHDLYDAVGL-- 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A ++++ + AN+ +G EP+F NP + + + +FF + Y
Sbjct: 251 -AEDVKKFLHYNANKALMNLGYEPMFPAETTNVNPAILSALSPNSDENHDFFSGSGSSYV 309
Query: 118 QG 119
G
Sbjct: 310 IG 311
>gi|46401830|ref|YP_006922.1| putative aerobic ribonucleoside diphosphate reductase, small
subunit [Enterobacteria phage T5]
gi|45775008|gb|AAS77140.1| putative aerobic ribonucleoside diphosphate reductase, small
subunit [Enterobacteria phage T5]
gi|51512032|gb|AAU05231.1| ribonucleotide reductase beta subunit [Enterobacteria phage T5]
gi|59897231|gb|AAX12026.1| ribonucleoside diphosphate reductase I beta chain [Enterobacteria
phage T5]
Length = 381
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGL 60
+DE+LH +I + + E K+ L + EI + H + +GL
Sbjct: 237 KDEALHTQMSKAIIQIMFQQFDKDLVDEAVAKAPAQLLKTLKTEIEWGHFIFKGRSLIGL 296
Query: 61 NAPSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVIDLKKEK 106
NA E+Y+ F+ IG+E L T+NP PW+ +D +
Sbjct: 297 NAELLEEYLYFVGRNAFMHIGVEWPSHLPVITKNPIPWIMNWLDTTSLQ 345
>gi|82778048|ref|YP_404397.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
dysenteriae Sd197]
gi|81242196|gb|ABB62906.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella
dysenteriae Sd197]
Length = 322
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKSLEKISEAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKTFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSSSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|15923722|ref|NP_371256.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus Mu50]
gi|15926409|ref|NP_373942.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus N315]
gi|21282423|ref|NP_645511.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus MW2]
gi|49482989|ref|YP_040213.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus MRSA252]
gi|49485604|ref|YP_042825.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57651569|ref|YP_185668.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus COL]
gi|82750436|ref|YP_416177.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus RF122]
gi|87162072|ref|YP_493420.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus USA300_FPR3757]
gi|88194508|ref|YP_499303.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus NCTC 8325]
gi|148267192|ref|YP_001246135.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus JH9]
gi|150393241|ref|YP_001315916.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus JH1]
gi|151220913|ref|YP_001331735.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156979060|ref|YP_001441319.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus Mu3]
gi|161508997|ref|YP_001574656.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|221141144|ref|ZP_03565637.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus str. JKD6009]
gi|253315835|ref|ZP_04839048.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus str. CF-Marseille]
gi|253731358|ref|ZP_04865523.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus USA300_TCH959]
gi|253732821|ref|ZP_04866986.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus TCH130]
gi|255005523|ref|ZP_05144124.2| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus Mu50-omega]
gi|257424852|ref|ZP_05601279.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus 55/2053]
gi|257427520|ref|ZP_05603919.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257430151|ref|ZP_05606535.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus 68-397]
gi|257432852|ref|ZP_05609212.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus E1410]
gi|257435756|ref|ZP_05611804.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus M876]
gi|257794947|ref|ZP_05643926.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus A9781]
gi|258418263|ref|ZP_05682528.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus A9763]
gi|258421560|ref|ZP_05684485.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus A9719]
gi|258430755|ref|ZP_05688467.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus A9299]
gi|258441753|ref|ZP_05691025.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus A8115]
gi|258445806|ref|ZP_05693983.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus A6300]
gi|258449617|ref|ZP_05697719.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus A6224]
gi|258452940|ref|ZP_05700934.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus A5948]
gi|258454017|ref|ZP_05701989.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus A5937]
gi|262049516|ref|ZP_06022386.1| ribonucleotide-diphosphate reductase beta subunit [Staphylococcus
aureus D30]
gi|262052319|ref|ZP_06024522.1| ribonucleotide-diphosphate reductase beta subunit [Staphylococcus
aureus 930918-3]
gi|269202352|ref|YP_003281621.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus ED98]
gi|282894500|ref|ZP_06302729.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus A8117]
gi|282903362|ref|ZP_06311253.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus C160]
gi|282905140|ref|ZP_06312998.1| ribonucleoside-diphosphate reductase beta subunit [Staphylococcus
aureus subsp. aureus Btn1260]
gi|282908118|ref|ZP_06315949.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282910377|ref|ZP_06318181.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282913572|ref|ZP_06321361.1| ribonucleoside-diphosphate reductase 2, beta subunit
[Staphylococcus aureus subsp. aureus M899]
gi|282918525|ref|ZP_06326262.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus C427]
gi|282922028|ref|ZP_06329725.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus A9765]
gi|282923491|ref|ZP_06331171.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus C101]
gi|282926597|ref|ZP_06334227.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus A10102]
gi|283957564|ref|ZP_06375017.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus A017934/97]
gi|284023753|ref|ZP_06378151.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus 132]
gi|293500617|ref|ZP_06666468.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus 58-424]
gi|293509565|ref|ZP_06668276.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus M809]
gi|293524151|ref|ZP_06670838.1| ribonucleoside-diphosphate reductase 2, beta subunit
[Staphylococcus aureus subsp. aureus M1015]
gi|294849402|ref|ZP_06790145.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A9754]
gi|295406453|ref|ZP_06816259.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A8819]
gi|295427309|ref|ZP_06819944.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|296275141|ref|ZP_06857648.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus MR1]
gi|297208541|ref|ZP_06924970.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|297245179|ref|ZP_06929053.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A8796]
gi|297590338|ref|ZP_06948977.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus MN8]
gi|300912633|ref|ZP_07130076.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus TCH70]
gi|304381650|ref|ZP_07364299.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|4490610|emb|CAB38643.1| ribonucleotide reductase minor subunit [Staphylococcus aureus]
gi|13700623|dbj|BAB41920.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
aureus subsp. aureus N315]
gi|14246501|dbj|BAB56894.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
aureus subsp. aureus Mu50]
gi|14329710|emb|CAC40668.1| ribonucleotide-diphosphate reductase beta chain [Staphylococcus
aureus]
gi|21203860|dbj|BAB94559.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
aureus subsp. aureus MW2]
gi|49241118|emb|CAG39796.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus
aureus subsp. aureus MRSA252]
gi|49244047|emb|CAG42473.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57285755|gb|AAW37849.1| ribonucleoside-diphosphate reductase 2, beta subunit
[Staphylococcus aureus subsp. aureus COL]
gi|82655967|emb|CAI80371.1| ribonucelotide diphosphate reductase beta chain [Staphylococcus
aureus RF122]
gi|87128046|gb|ABD22560.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus USA300_FPR3757]
gi|87202066|gb|ABD29876.1| ribonucleotide-disphosphate reductase beta chain, putative
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|147740261|gb|ABQ48559.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Staphylococcus aureus subsp. aureus JH9]
gi|149945693|gb|ABR51629.1| Ribonucleoside-diphosphate reductase [Staphylococcus aureus subsp.
aureus JH1]
gi|150373713|dbj|BAF66973.1| ribonucleotide-diphosphate reductase beta chain [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156721195|dbj|BAF77612.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
aureus subsp. aureus Mu3]
gi|160367806|gb|ABX28777.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|253724883|gb|EES93612.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus USA300_TCH959]
gi|253729186|gb|EES97915.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus TCH130]
gi|257272422|gb|EEV04545.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus 55/2053]
gi|257275713|gb|EEV07186.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257279348|gb|EEV09949.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus 68-397]
gi|257282267|gb|EEV12402.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus E1410]
gi|257284947|gb|EEV15066.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus M876]
gi|257788919|gb|EEV27259.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus A9781]
gi|257839056|gb|EEV63535.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus A9763]
gi|257842486|gb|EEV66910.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus A9719]
gi|257849427|gb|EEV73397.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus A9299]
gi|257852222|gb|EEV76149.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus A8115]
gi|257855382|gb|EEV78320.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus A6300]
gi|257857125|gb|EEV80024.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus A6224]
gi|257859451|gb|EEV82305.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus A5948]
gi|257863882|gb|EEV86638.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus A5937]
gi|259159759|gb|EEW44800.1| ribonucleotide-diphosphate reductase beta subunit [Staphylococcus
aureus 930918-3]
gi|259162352|gb|EEW46924.1| ribonucleotide-diphosphate reductase beta subunit [Staphylococcus
aureus D30]
gi|262074642|gb|ACY10615.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus ED98]
gi|269940309|emb|CBI48686.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus
aureus subsp. aureus TW20]
gi|282314359|gb|EFB44749.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus C101]
gi|282317659|gb|EFB48031.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus C427]
gi|282322604|gb|EFB52926.1| ribonucleoside-diphosphate reductase 2, beta subunit
[Staphylococcus aureus subsp. aureus M899]
gi|282325769|gb|EFB56077.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282327783|gb|EFB58065.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282331965|gb|EFB61476.1| ribonucleoside-diphosphate reductase beta subunit [Staphylococcus
aureus subsp. aureus Btn1260]
gi|282591490|gb|EFB96562.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus A10102]
gi|282593686|gb|EFB98678.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus A9765]
gi|282596317|gb|EFC01278.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus C160]
gi|282763213|gb|EFC03344.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus A8117]
gi|283470026|emb|CAQ49237.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus ST398]
gi|283791015|gb|EFC29830.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus A017934/97]
gi|285816434|gb|ADC36921.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
[Staphylococcus aureus 04-02981]
gi|290921114|gb|EFD98175.1| ribonucleoside-diphosphate reductase 2, beta subunit
[Staphylococcus aureus subsp. aureus M1015]
gi|291095622|gb|EFE25883.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus 58-424]
gi|291467662|gb|EFF10177.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus M809]
gi|294823934|gb|EFG40360.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A9754]
gi|294968598|gb|EFG44621.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A8819]
gi|295128697|gb|EFG58328.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|296886796|gb|EFH25700.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|297177850|gb|EFH37099.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A8796]
gi|297576637|gb|EFH95352.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus MN8]
gi|298694063|gb|ADI97285.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus subsp.
aureus ED133]
gi|300886879|gb|EFK82081.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus TCH70]
gi|302332442|gb|ADL22635.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus JKD6159]
gi|302750629|gb|ADL64806.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|304339753|gb|EFM05698.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312438843|gb|ADQ77914.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus TCH60]
gi|312829224|emb|CBX34066.1| ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
reductase small subunit) [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315129414|gb|EFT85407.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus CGS03]
gi|315194351|gb|EFU24743.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus CGS00]
gi|315196404|gb|EFU26755.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus CGS01]
gi|320139937|gb|EFW31798.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus MRSA131]
gi|320141974|gb|EFW33802.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus MRSA177]
gi|323438919|gb|EGA96654.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus O11]
gi|323441867|gb|EGA99507.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
aureus O46]
gi|329313453|gb|AEB87866.1| Ribonucleoside-diphosphate reductase class Ib beta subunit
[Staphylococcus aureus subsp. aureus T0131]
gi|329724628|gb|EGG61135.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus 21172]
gi|329728537|gb|EGG64970.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus 21189]
Length = 323
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F ++ E ++ Q+ +L++ L E +Y +
Sbjct: 194 DESIHGVFTGLDAQHLRNELSESEKQKADQEMYKLLNDLYLNEESYTKMLYDDLGI---T 250
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG- 119
Y+++ N+ +G EP F+ E NP + +D + +FF + Y
Sbjct: 251 EDVLNYVKYNGNKALSNLGFEPYFEEREFNPI--IENALDTTTKNHDFFSVKGDGYVLAL 308
Query: 120 --AELKWD 125
L+ D
Sbjct: 309 NVEALQDD 316
>gi|219883069|ref|YP_002478233.1| Ribonucleoside-diphosphate reductase [Arthrobacter chlorophenolicus
A6]
gi|219862075|gb|ACL42416.1| Ribonucleoside-diphosphate reductase [Arthrobacter chlorophenolicus
A6]
Length = 326
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 53/135 (39%), Gaps = 13/135 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
++DE++H + + + +E Q + +L E E+ Y H+ +
Sbjct: 194 IKDEAVHGYYIGYKFQRGLEKETAERREELQAYAYELLDELYENEVQYTHDLYDGVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A ++++ + AN+ +GL+P+F NP + + + +FF + Y
Sbjct: 252 -AEDVKKFLHYNANKALMNLGLDPVFAQDATNVNPAILSALSPNADENHDFFSGSGSSYI 310
Query: 118 QGAE-------LKWD 125
G+ WD
Sbjct: 311 VGSSKAVSTLDGDWD 325
>gi|329729655|gb|EGG66056.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus 21193]
Length = 323
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F ++ E ++ Q+ +L++ L E +Y +
Sbjct: 194 DESIHGVFTGLDAQHLRNELSESEKQKADQEMYKLLNDLYLNEESYTKMLYDDLGI---T 250
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG- 119
Y+++ N+ +G EP F+ E NP + +D + +FF + Y
Sbjct: 251 EDVLNYVKYNGNKALSNLGFEPYFEEREFNPI--IENALDTTTKNHDFFSVKGDGYVLAL 308
Query: 120 --AELKWD 125
L+ D
Sbjct: 309 NVEALQDD 316
>gi|55821276|ref|YP_139718.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
thermophilus LMG 18311]
gi|55823189|ref|YP_141630.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
thermophilus CNRZ1066]
gi|116628014|ref|YP_820633.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
thermophilus LMD-9]
gi|55737261|gb|AAV60903.1| ribonucleotide diphosphate reductase beta subunit [Streptococcus
thermophilus LMG 18311]
gi|55739174|gb|AAV62815.1| ribonucleotide diphosphate reductase beta subunit [Streptococcus
thermophilus CNRZ1066]
gi|116101291|gb|ABJ66437.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Streptococcus thermophilus LMD-9]
gi|312278606|gb|ADQ63263.1| Ribonucleoside-diphosphate reductase class Ib beta subunit
[Streptococcus thermophilus ND03]
Length = 320
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + F++ +L++ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEKEQESFREWMYDLLYQLYENEELYTKSLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF + NP M+ + +FF Y
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDSANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGA--ELKWD 125
G ++ D
Sbjct: 304 LGTVEAMQDD 313
>gi|282916074|ref|ZP_06323837.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus D139]
gi|283769895|ref|ZP_06342787.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus H19]
gi|282320022|gb|EFB50369.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
aureus subsp. aureus D139]
gi|283460042|gb|EFC07132.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
aureus subsp. aureus H19]
Length = 323
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F ++ E ++ Q+ +L++ L E +Y +
Sbjct: 194 DESIHGVFTGLDAQHLRNELSESEKQKADQEMYKLLNDLYLNEESYTKMLYDDLGI---T 250
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG- 119
Y+++ N+ +G EP F+ E NP + +D + +FF + Y
Sbjct: 251 EDVLNYVKYNGNKALSNLGFEPYFEEREFNPI--IENALDTTTKNHDFFSVKGDGYVLAL 308
Query: 120 --AELKWD 125
L+ D
Sbjct: 309 NVEALQDD 316
>gi|239917558|ref|YP_002957116.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Micrococcus luteus NCTC 2665]
gi|281413955|ref|ZP_06245697.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Micrococcus luteus NCTC 2665]
gi|239838765|gb|ACS30562.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Micrococcus luteus NCTC 2665]
Length = 323
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 49/122 (40%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + P +E + + +L E E+ Y H+ +
Sbjct: 193 IRDEAVHGYYIGYKYQRSIETLPEEKREELKAFTFELLFELYENEVEYTHDLYDAVGL-- 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A ++++ + AN+ +G EP+F NP + + + +FF + Y
Sbjct: 251 -AEDVKKFLHYNANKALMNLGYEPMFPAETTNVNPAILSALSPNSDENHDFFSGSGSSYV 309
Query: 118 QG 119
G
Sbjct: 310 IG 311
>gi|251797995|ref|YP_003012726.1| ribonucleotide-diphosphate reductase subunit beta [Paenibacillus
sp. JDR-2]
gi|247545621|gb|ACT02640.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. JDR-2]
Length = 318
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 13/123 (10%)
Query: 1 MRDESLHL----NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
+RDES+H ++ NQ E + +++ +L+ E+ Y
Sbjct: 188 LRDESIHGLYVGVLAQELFNQFTPEE----QAQLKEEVFALLNTLYENEVVYTDNLY--S 241
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTE 115
+GL + Y+++ AN+ +G EP F NP + + + K+ +FF +
Sbjct: 242 PIGLQ-EDVKAYVRYNANKALMNLGFEPYFPEEPVNPIVF-NGISTHTKQHDFFSKKGNG 299
Query: 116 YQQ 118
Y +
Sbjct: 300 YVR 302
>gi|228476905|ref|ZP_04061550.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
salivarius SK126]
gi|228251479|gb|EEK10624.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
salivarius SK126]
Length = 319
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + F++ +L++ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQESFREWMYDLLYQLYENEELYTKSLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF + NP M+ + +FF Y
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDSANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGA--ELKWD 125
G ++ D
Sbjct: 304 LGTVEAMQDD 313
>gi|182682906|ref|YP_001837030.1| putative aerobic ribonucleoside diphosphate reductase, small
subunit [Enterobacteria phage EPS7]
gi|182630618|gb|ACB97550.1| putative aerobic ribonucleoside diphosphate reductase, small
subunit [Enterobacteria phage EPS7]
Length = 381
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGL 60
+DE+LH +I + + E K+ T L + EI + H + +GL
Sbjct: 237 KDEALHTQMSKAIIQIMFQQFDKDLVDEALAKAPTQLLKTLKTEIEWGHFIFKGRSLIGL 296
Query: 61 NAPSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVIDLKKEK 106
NA E+Y+ F+ IG+E L T+NP PW+ +D +
Sbjct: 297 NAELLEEYLYFVGRNAFMHIGVEWPSHLPVITKNPIPWIMNWLDTTSLQ 345
>gi|227833759|ref|YP_002835466.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
aurimucosum ATCC 700975]
gi|262184833|ref|ZP_06044254.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
aurimucosum ATCC 700975]
gi|227454775|gb|ACP33528.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
aurimucosum ATCC 700975]
Length = 328
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 45/124 (36%), Gaps = 6/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q E Q K +L + E Y + +G
Sbjct: 198 IRDEAVHGYYIGYKYQQQVKHLDQAQQAELQSKVIDLLLDLMDNEEHYTRDLY--DPLGW 255
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVID--LKKEKNFFETRVTEYQ 117
++++ AN+ + +G + ++ F P + ++ + +FF + Y
Sbjct: 256 TEDVLA-FLRYNANKALNNLGYDGIYPQDMCRFNPGVMTSLNPGADENHDFFSGSGSSYV 314
Query: 118 QGAE 121
G
Sbjct: 315 IGTA 318
>gi|242372965|ref|ZP_04818539.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
epidermidis M23864:W1]
gi|242349291|gb|EES40892.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
epidermidis M23864:W1]
Length = 322
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 7/119 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F ++ E ++ Q+ +L+E E++Y H +
Sbjct: 194 DESIHGVFTGLDAQSLRNELSESEKQKADQEMYKLLNELYDNEVSYTHLLYDDIGL---T 250
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
Y+++ N+ +G EP F+ E NP + +D + +FF + Y
Sbjct: 251 EDVLNYVRYNGNKALSNLGFEPYFEEREFNPI--IENALDTSTKNHDFFSVKGDGYTLA 307
>gi|259046997|ref|ZP_05737398.1| ribonucleoside-diphosphate reductase 2, beta subunit
[Granulicatella adiacens ATCC 49175]
gi|259036316|gb|EEW37571.1| ribonucleoside-diphosphate reductase 2, beta subunit
[Granulicatella adiacens ATCC 49175]
Length = 346
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 7/124 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + Q E +E + + E E+ Y VG
Sbjct: 215 IRDESVHGTYTGYKFQQGYNELSEQEQEEMKMWVYNLCLELYQNEVKYTQSIY--DQVGW 272
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++++ AN+ +G +PLF T +P M+ + +FF Y
Sbjct: 273 T-EKVKVFIRYNANKALQNLGFDPLFPDTAEDVDPIV-MNGISTGTSNHDFFSQVGNGYL 330
Query: 118 QGAE 121
G+
Sbjct: 331 LGSV 334
>gi|223043034|ref|ZP_03613082.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
capitis SK14]
gi|314933044|ref|ZP_07840410.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
caprae C87]
gi|222443888|gb|EEE49985.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
capitis SK14]
gi|313654363|gb|EFS18119.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
caprae C87]
Length = 322
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 7/119 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F ++ E ++ Q+ +L+E E++Y H +
Sbjct: 194 DESIHGVFTGLDAQSLRNELSESEKQKADQEMYKLLNELYDNEVSYTHLLYDDIGL---T 250
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
Y+++ N+ +G EP F+ E NP + +D + +FF + Y
Sbjct: 251 EDVLNYVRYNGNKALSNLGFEPYFEEREFNPI--IENALDTSTKNHDFFSVKGDGYTLA 307
>gi|70727160|ref|YP_254076.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
haemolyticus JCSC1435]
gi|68447886|dbj|BAE05470.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
haemolyticus JCSC1435]
Length = 322
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 7/119 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F ++ E ++ ++ +L + E++Y H + +
Sbjct: 194 DESIHGVFTGLDAQSLRNELSENEKQKADKEMYKLLEDLYANEVSYTHMLYDDIGL---S 250
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
Y+Q+ N+ +G EP F+ E NP + +D + +FF + Y
Sbjct: 251 EDVLNYVQYNGNKALSNLGFEPYFEEKEFNPI--IENALDTTTKNHDFFSVKGDGYTLA 307
>gi|315605404|ref|ZP_07880447.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp.
oral taxon 180 str. F0310]
gi|315312973|gb|EFU61047.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp.
oral taxon 180 str. F0310]
Length = 329
Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + E+ + + + ++L+E E Y + +GL
Sbjct: 199 IRDEAVHGYYIGYKYQLAVNESSQERQDDLRDYTYSLLYELYENEEQYTEDLY--DPLGL 256
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF + NP + + + +FF + Y
Sbjct: 257 T-EDVKKFLRYNANKALMNLGYEALFPHDATNVNPAILAALSPNADENHDFFSGSGSSYV 315
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 316 MGEVVDTEDEDWD 328
>gi|325973169|ref|YP_004250233.1| ribonucleoside-diphosphate reductase subunit beta [Mycoplasma suis
str. Illinois]
gi|323651771|gb|ADX97853.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma suis
str. Illinois]
Length = 330
Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 56/127 (44%), Gaps = 9/127 (7%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVG 59
+RDE++H + ++ +++ ++ +++ ++L E EI Y + P VG
Sbjct: 200 IRDEAIHGLYIGNLASKLFSTFDSEKQEKLKKQVYSLLEELMENEIEYTEKVYSPINLVG 259
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEY 116
Q++++ AN+ + LE + TE NP + K +FF T+ Y
Sbjct: 260 ----EVIQFLKYNANKALQNLDLEEKYDVTENDINPMIFNGLNTSTKNH-DFFSTKGNGY 314
Query: 117 QQGAELK 123
+ ++
Sbjct: 315 IKTTHVE 321
>gi|212716021|ref|ZP_03324149.1| hypothetical protein BIFCAT_00933 [Bifidobacterium catenulatum DSM
16992]
gi|212661388|gb|EEB21963.1| hypothetical protein BIFCAT_00933 [Bifidobacterium catenulatum DSM
16992]
Length = 330
Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + E + + +L+E E+ Y VGL
Sbjct: 200 IRDEAVHGYYIGYKYQKGLERVSEDKRGELRDYTYDLLNELYDNEVEYTRSLYE--PVGL 257
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
E+++++ N+ +G LF NP + + + +FF + Y
Sbjct: 258 TQD-VEKFLRYNGNKALMNLGYPALFPQEICDVNPSILAALSPNADENHDFFSGSGSSYV 316
Query: 118 QGAELKWD 125
G ++ D
Sbjct: 317 MGKSVETD 324
>gi|52080345|ref|YP_079136.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
licheniformis ATCC 14580]
gi|52785724|ref|YP_091553.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
licheniformis ATCC 14580]
gi|319645870|ref|ZP_08000100.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus sp.
BT1B_CT2]
gi|52003556|gb|AAU23498.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus
licheniformis ATCC 14580]
gi|52348226|gb|AAU40860.1| NrdF [Bacillus licheniformis ATCC 14580]
gi|317391620|gb|EFV72417.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus sp.
BT1B_CT2]
Length = 325
Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +I + +E S +L E E+ Y + + +
Sbjct: 195 LRDEAIHGVYVGLLAQEIYNQQTPEKKEELYAFSIDLLKELYENELEYTEDLYDQVGL-- 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
+ ++++++ AN+ +G E F+ E NP + ++ K + +FF + Y++
Sbjct: 253 -SHDVKKFIRYNANKALMNLGFEAYFEEEEINPI--VLNGLNTKTKSHDFFSMKGNGYKK 309
Query: 119 GAE 121
Sbjct: 310 ATV 312
>gi|228475302|ref|ZP_04060026.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
hominis SK119]
gi|228270678|gb|EEK12092.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
hominis SK119]
Length = 322
Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 7/119 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F ++ E ++ ++ +L E E++Y H +
Sbjct: 194 DESIHGVFTGLDAQSLRNELSENEKQKADKEMYKLLEELYKNEVSYTHMLYDDIGL---T 250
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
Y+Q+ N+ +G EP F+ E NP + +D + +FF + Y
Sbjct: 251 EDVLNYVQYNGNKALSNLGFEPYFEEKEFNPI--IENALDTSTKNHDFFSVKGDGYTLA 307
>gi|319408170|emb|CBI81823.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
schoenbuchensis R1]
Length = 324
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + ML + +E Y + +GL
Sbjct: 194 IRDEAVHGYYVGYKFQLGFAKLDEAKKQEIKDFAFNMLFDLYSIECKYTEDLY--DAIGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 252 T-EDVKVFIHYNANKALMNLGFEPLFPPEVCRVNPAILAALSPNSDENHDFFSGSGSSYV 310
Query: 118 --QGAELKWD 125
+ D
Sbjct: 311 IGKAVATTDD 320
>gi|314936969|ref|ZP_07844316.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
hominis subsp. hominis C80]
gi|313655588|gb|EFS19333.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
hominis subsp. hominis C80]
Length = 322
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 7/119 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F ++ E ++ ++ +L E E++Y H +
Sbjct: 194 DESIHGVFTGLDAQSLRNELSENEKQKADKEMYKLLEELYKNEVSYTHMLYDDIGL---T 250
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
Y+Q+ N+ +G EP F+ E NP + +D + +FF + Y
Sbjct: 251 EDVLNYVQYNGNKALSNLGFEPYFEEKEFNPI--IENALDTSTKNHDFFSVKGDGYTLA 307
>gi|149277655|ref|ZP_01883795.1| ribonucleotide-diphosphate [Pedobacter sp. BAL39]
gi|149231343|gb|EDM36722.1| ribonucleotide-diphosphate [Pedobacter sp. BAL39]
Length = 327
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F + + + P ++ + K +L E E+ Y E VGL A
Sbjct: 197 DESIHGVFVGLLAQDVYKKLP--NPEKCKAKLEALLMELYENELKYTDELY--TEVGLTA 252
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
++Y+++ AN+ +G E LF+ N + ++++ + +FF + T Y++
Sbjct: 253 E-VKEYVRYNANKAMMNLGFEELFEVKPINAI--VLNGLNVETTQHDFFSKKSTNYEKS 308
>gi|222153355|ref|YP_002562532.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
uberis 0140J]
gi|222114168|emb|CAR42683.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptococcus uberis 0140J]
Length = 319
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 7/124 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E + F++ +L++ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSEDKQESFREWMYDLLYQLYENEEEYTKTLY--DPVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGAE 121
G+
Sbjct: 304 LGSV 307
>gi|289809666|ref|ZP_06540295.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 74
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF-FETRVTEY---QQ 118
QY+++I N R +GL+ F+ NP PW++ + + E V+ Y Q
Sbjct: 1 DILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQI 60
Query: 119 GAELKWD 125
+E+ D
Sbjct: 61 DSEVDTD 67
>gi|23465253|ref|NP_695856.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
longum NCC2705]
gi|23325884|gb|AAN24492.1| ribonucleoside-diphosphate reductase 2 beta chain [Bifidobacterium
longum NCC2705]
Length = 330
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + Q + +L+E E+ Y +
Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSLYDCVGL-- 257
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
E+++++ N+ +G LF NP + + + +FF + Y
Sbjct: 258 -TDDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILAALSPNADENHDFFSGSGSSYV 316
Query: 118 --QGAELKWD 125
+ E D
Sbjct: 317 MGKAEETDDD 326
>gi|296455120|ref|YP_003662264.1| ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp.
longum JDM301]
gi|296184552|gb|ADH01434.1| Ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp.
longum JDM301]
Length = 330
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + Q + +L+E E+ Y + +
Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSLYDRVGL-- 257
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
E+++++ N+ +G LF NP S + + +FF + Y
Sbjct: 258 -TDDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILASLSPNADENHDFFSGSGSSYV 316
Query: 118 --QGAELKWD 125
+ E D
Sbjct: 317 MGKAEETDDD 326
>gi|293193572|ref|ZP_06609842.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces
odontolyticus F0309]
gi|292819928|gb|EFF78930.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces
odontolyticus F0309]
Length = 320
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + E+ + + + ++L+E E Y + +GL
Sbjct: 190 IRDEAVHGYYIGYKYQLAVNESSQERQDDLRDYTYSLLYELYENEEQYTEDLY--DPLGL 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF NP + + + +FF + Y
Sbjct: 248 T-EDVKKFLRYNANKALMNLGYEALFPADATDVNPAILAALSPNADENHDFFSGSGSSYV 306
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 307 MGEVVDTEDEDWD 319
>gi|313890786|ref|ZP_07824411.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pseudoporcinus SPIN 20026]
gi|313120887|gb|EFR44001.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pseudoporcinus SPIN 20026]
Length = 319
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E + F++ +L++ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELNEEEQESFREWMYDLLYQLYENEENYTKTLY--DQVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 246 TDEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGA--ELKWD 125
G+ ++ D
Sbjct: 304 LGSVEAMQDD 313
>gi|156096873|ref|XP_001614470.1| ribonucleotide reductase small subunit [Plasmodium vivax SaI-1]
gi|148803344|gb|EDL44743.1| ribonucleotide reductase small subunit, putative [Plasmodium vivax]
Length = 335
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N HL K + A LE ++ E + + +
Sbjct: 215 RDEYLHGDFSVMCCN-------HLNNKLKYESLLDYFKMAVELEYQFSMEMLELSVLKIK 267
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95
+ +++++A+ + F ++ PF W
Sbjct: 268 KEQVKSFLEYLADTMLVNLKHPKYFN-SKYPFTW 300
>gi|218690804|ref|YP_002399016.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
ED1a]
gi|218428368|emb|CAR09297.2| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
[Escherichia coli ED1a]
Length = 319
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 50/126 (39%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ + ++ + AN+ +G EPLF NP + + + + +FF + Y
Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAIFAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|326632980|ref|YP_004306569.1| putative aerobic ribonucleoside diphosphate reductase small subunit
[Enterobacteria phage SPC35]
gi|321272174|gb|ADW80066.1| putative aerobic ribonucleoside diphosphate reductase small subunit
[Enterobacteria phage SPC35]
Length = 381
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGL 60
+DE+LH +I + + E K+ L + EI + H + +GL
Sbjct: 237 KDEALHTQMSKAIIQIMFQQFDKDLVNEAVAKAPAQLLKTLKTEIEWGHFIFKGRSLIGL 296
Query: 61 NAPSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVIDLKKEK 106
NA E+Y+ F+ IG++ L T+NP PW+ +D +
Sbjct: 297 NAELLEEYLYFVGRNAFMHIGVKWPSHLPVITKNPIPWIMNWLDTTSLQ 345
>gi|325291517|ref|YP_004277381.1| ribonucleotide-diphosphate reductase subunit beta [Agrobacterium
sp. H13-3]
gi|325059370|gb|ADY63061.1| ribonucleotide-diphosphate reductase subunit beta [Agrobacterium
sp. H13-3]
Length = 324
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E Y + +
Sbjct: 194 IRDEAVHGYYIGYKFQRALERLGEAEKQEIKDFAFDLLLELYDNEAKYTQDLYDGVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+Q++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 252 -TEDVKQFLHYNANKALMNLGYEALFPPEACRVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 311 IGKAVATEDEDWD 323
>gi|118469232|ref|YP_886661.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
smegmatis str. MC2 155]
gi|118469934|ref|YP_885432.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
smegmatis str. MC2 155]
gi|118170519|gb|ABK71415.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
smegmatis str. MC2 155]
gi|118171221|gb|ABK72117.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
smegmatis str. MC2 155]
Length = 324
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y + VGL
Sbjct: 194 IRDEAVHGYYIGYKYQRGLALVDEEKKQELKDYTYELLFELYDNEVEYTQDLY--DSVGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALAPNADENHDFFSGSGSSYV 310
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 311 IGKAVNTEDEDWD 323
>gi|213693323|ref|YP_002323909.1| Ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|213524784|gb|ACJ53531.1| Ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320459505|dbj|BAJ70126.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium
longum subsp. infantis ATCC 15697]
Length = 330
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + Q + +L+E E+ Y + +
Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLGDAERLDLQDYTYDLLNELYDNEVEYTQSLYDRVGL-- 257
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
E+++++ N+ +G LF NP S + + +FF + Y
Sbjct: 258 -TDDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILASLSPNADENHDFFSGSGSSYV 316
Query: 118 --QGAELKWD 125
+ E D
Sbjct: 317 MGKAEETDDD 326
>gi|326483608|gb|EGE07618.1| hypothetical protein TEQG_06532 [Trichophyton equinum CBS 127.97]
Length = 317
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 7/53 (13%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP 54
RDE LH +F + + HL + ++ EA +E + + +P
Sbjct: 272 RDEGLHTDFACLLFS-------HLNYRPDPNAVEAIITEAVTIEQEFLTDALP 317
>gi|203454817|ref|YP_002225133.1| gp256 [Mycobacterium phage Myrna]
gi|197311865|gb|ACH62223.1| gp256 [Mycobacterium phage Myrna]
Length = 322
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 46/130 (35%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E Y +
Sbjct: 192 IRDEAVHGYYIGYKFQKGLEKETKARQQELKDYTYELLFELFDNEQEYTQDL---YDATG 248
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEKNFFETRVTEY- 116
++++++ N+ +G + LF NP + + +FF + Y
Sbjct: 249 QTEDVKKFLRYNGNKALQNLGYDALFSRSDCDVNPAILSALSPGGDENHDFFSGSGSTYV 308
Query: 117 -QQGAELKWD 125
+G + D
Sbjct: 309 MAKGVVTEDD 318
>gi|15842613|ref|NP_337650.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis CDC1551]
gi|31794226|ref|NP_856719.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
bovis AF2122/97]
gi|57117051|ref|YP_177921.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis H37Rv]
gi|121638932|ref|YP_979156.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|148662901|ref|YP_001284424.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis H37Ra]
gi|148824239|ref|YP_001288993.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis F11]
gi|167969649|ref|ZP_02551926.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis H37Ra]
gi|215405040|ref|ZP_03417221.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis 02_1987]
gi|215412903|ref|ZP_03421607.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis 94_M4241A]
gi|215428496|ref|ZP_03426415.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis T92]
gi|215432000|ref|ZP_03429919.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis EAS054]
gi|215447324|ref|ZP_03434076.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis T85]
gi|218754813|ref|ZP_03533609.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis GM 1503]
gi|219559083|ref|ZP_03538159.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis T17]
gi|224991424|ref|YP_002646113.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253797854|ref|YP_003030855.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis KZN 1435]
gi|254233678|ref|ZP_04927003.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
[Mycobacterium tuberculosis C]
gi|254365678|ref|ZP_04981723.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
[Mycobacterium tuberculosis str. Haarlem]
gi|254552123|ref|ZP_05142570.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|260188080|ref|ZP_05765554.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis CPHL_A]
gi|260202186|ref|ZP_05769677.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis T46]
gi|260206381|ref|ZP_05773872.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis K85]
gi|289444611|ref|ZP_06434355.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
tuberculosis T46]
gi|289448726|ref|ZP_06438470.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis CPHL_A]
gi|289553161|ref|ZP_06442371.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis KZN 605]
gi|289571250|ref|ZP_06451477.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis T17]
gi|289575758|ref|ZP_06455985.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis K85]
gi|289746856|ref|ZP_06506234.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis 02_1987]
gi|289751720|ref|ZP_06511098.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis T92]
gi|289755164|ref|ZP_06514542.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis EAS054]
gi|289759173|ref|ZP_06518551.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis T85]
gi|289763226|ref|ZP_06522604.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
[Mycobacterium tuberculosis GM 1503]
gi|294993448|ref|ZP_06799139.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis 210]
gi|297635679|ref|ZP_06953459.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis KZN 4207]
gi|297732677|ref|ZP_06961795.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis KZN R506]
gi|298526518|ref|ZP_07013927.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis 94_M4241A]
gi|306777354|ref|ZP_07415691.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu001]
gi|306781258|ref|ZP_07419595.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu002]
gi|306785899|ref|ZP_07424221.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu003]
gi|306790253|ref|ZP_07428575.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu004]
gi|306794748|ref|ZP_07433050.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu005]
gi|306798990|ref|ZP_07437292.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu006]
gi|306804833|ref|ZP_07441501.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu008]
gi|306809026|ref|ZP_07445694.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu007]
gi|306969126|ref|ZP_07481787.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu009]
gi|306973470|ref|ZP_07486131.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu010]
gi|307081181|ref|ZP_07490351.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu011]
gi|307085780|ref|ZP_07494893.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu012]
gi|313660009|ref|ZP_07816889.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis KZN V2475]
gi|81671996|sp|Q50549|RIR2B_MYCTU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta
nrdF2; AltName: Full=Ribonucleoside-diphosphate
reductase nrdF2; AltName: Full=Ribonucleotide reductase
R2-2 small subunit
gi|1395209|gb|AAB81406.1| ribonucleotide reductase R2-2 small subunit [Mycobacterium
tuberculosis]
gi|13882928|gb|AAK47464.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
[Mycobacterium tuberculosis CDC1551]
gi|31619821|emb|CAD96761.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF2
(RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN)
[Mycobacterium bovis AF2122/97]
gi|41352780|emb|CAE55544.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF2
(RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN)
[Mycobacterium tuberculosis H37Rv]
gi|121494580|emb|CAL73061.1| Ribonucleoside-diphosphate reductase (beta chain) nrdF2
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|124599207|gb|EAY58311.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
[Mycobacterium tuberculosis C]
gi|134151191|gb|EBA43236.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
[Mycobacterium tuberculosis str. Haarlem]
gi|148507053|gb|ABQ74862.1| ribonucleoside-diphosphate reductase subunit beta NrdF2
[Mycobacterium tuberculosis H37Ra]
gi|148722766|gb|ABR07391.1| ribonucleoside-diphosphate reductase beta subunit nrdF2
[Mycobacterium tuberculosis F11]
gi|224774539|dbj|BAH27345.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253319357|gb|ACT23960.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis KZN 1435]
gi|289417530|gb|EFD14770.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
tuberculosis T46]
gi|289421684|gb|EFD18885.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis CPHL_A]
gi|289437793|gb|EFD20286.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis KZN 605]
gi|289540189|gb|EFD44767.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis K85]
gi|289545004|gb|EFD48652.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis T17]
gi|289687384|gb|EFD54872.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis 02_1987]
gi|289692307|gb|EFD59736.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis T92]
gi|289695751|gb|EFD63180.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis EAS054]
gi|289710732|gb|EFD74748.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
[Mycobacterium tuberculosis GM 1503]
gi|289714737|gb|EFD78749.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis T85]
gi|298496312|gb|EFI31606.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis 94_M4241A]
gi|308214246|gb|EFO73645.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu001]
gi|308325901|gb|EFP14752.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu002]
gi|308329423|gb|EFP18274.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu003]
gi|308333268|gb|EFP22119.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu004]
gi|308336923|gb|EFP25774.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu005]
gi|308340739|gb|EFP29590.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu006]
gi|308344606|gb|EFP33457.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu007]
gi|308348554|gb|EFP37405.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu008]
gi|308353280|gb|EFP42131.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu009]
gi|308357113|gb|EFP45964.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu010]
gi|308361065|gb|EFP49916.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu011]
gi|308364701|gb|EFP53552.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis SUMu012]
gi|323718280|gb|EGB27458.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis CDC1551A]
gi|326902729|gb|EGE49662.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis W-148]
gi|328457631|gb|AEB03054.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Mycobacterium tuberculosis KZN 4207]
Length = 324
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + E + + +L E E+ Y + VGL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 --QGAELKWD 125
+ + D
Sbjct: 311 IGKAVVTEDD 320
>gi|169630485|ref|YP_001704134.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
abscessus ATCC 19977]
gi|169242452|emb|CAM63480.1| Probable ribonucleoside-diphosphate reductase beta subunit
[Mycobacterium abscessus]
Length = 324
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + E ++ + +L+E E Y + + +
Sbjct: 194 IRDEAVHGYYIGYKFQRGLERVDEAKRAEIKEYTYDLLYELYENETDYTEDLYDEVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 252 -TEDVKKFLRYNANKALMNLGYEALFPREETDVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 311 IGKAVNTEDEDWD 323
>gi|212712928|ref|ZP_03321056.1| hypothetical protein PROVALCAL_04026 [Providencia alcalifaciens DSM
30120]
gi|212684406|gb|EEB43934.1| hypothetical protein PROVALCAL_04026 [Providencia alcalifaciens DSM
30120]
Length = 323
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 47/133 (35%), Gaps = 14/133 (10%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + E + + ++L + EI Y E
Sbjct: 193 IRDEAIHGYYIGYKFQKALAHYSEQERNEIKDFTFSLLLDLYENEIKYTQELYDGVGW-- 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
+ + ++ + AN+ +G E LF + +S I D + +FF +
Sbjct: 251 -SEDVKSFLHYNANKALMNLGYEALFPDS---ITQVSPEILSALSPDANENHDFFSGSGS 306
Query: 115 EYQ--QGAELKWD 125
Y + + D
Sbjct: 307 SYVIGKAVSTEDD 319
>gi|226305840|ref|YP_002765800.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus
erythropolis PR4]
gi|229493405|ref|ZP_04387194.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodococcus
erythropolis SK121]
gi|226184957|dbj|BAH33061.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus
erythropolis PR4]
gi|229319721|gb|EEN85553.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodococcus
erythropolis SK121]
Length = 321
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y + +
Sbjct: 191 IRDEAVHGYYIGYKYQKGLEQLTEAEREELKNYTFELLFELYENEVDYTQDLYDGVGL-- 248
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ + +G E LF E NP + + + +FF + Y
Sbjct: 249 -TEDVKKFLRYNANKALNNLGYEGLFPKDETDVNPAILSALSPNADENHDFFSGSGSSYV 307
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 308 IGKAVNTEDDDWD 320
>gi|291455662|ref|ZP_06595052.1| ribonucleoside-diphosphate reductase, beta subunit [Bifidobacterium
breve DSM 20213]
gi|291382590|gb|EFE90108.1| ribonucleoside-diphosphate reductase, beta subunit [Bifidobacterium
breve DSM 20213]
Length = 330
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + Q + +L+E E+ Y + +
Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLTDAERMDMQDYTYDLLNELYDNEVEYTQSLYDRVGL-- 257
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
E+++++ N+ +G LF NP + + + +FF + Y
Sbjct: 258 -TEDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILAALSPNADENHDFFSGSGSSYV 316
Query: 118 --QGAELKWD 125
+ E D
Sbjct: 317 MGKAEETDDD 326
>gi|320546423|ref|ZP_08040738.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
equinus ATCC 9812]
gi|320448808|gb|EFW89536.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
equinus ATCC 9812]
Length = 320
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 47/130 (36%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E E + +L++ E Y VG
Sbjct: 189 IRDESVHGTYIGYKFQLGFNELSEDKQDELRDWMYDLLYQLYENEENYTKSLY--DEVGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 247 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 304
Query: 118 QGA--ELKWD 125
G+ +K D
Sbjct: 305 LGSVEAMKDD 314
>gi|296128314|ref|YP_003635564.1| Ribonucleoside-diphosphate reductase [Cellulomonas flavigena DSM
20109]
gi|296020129|gb|ADG73365.1| Ribonucleoside-diphosphate reductase [Cellulomonas flavigena DSM
20109]
Length = 326
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + E + + +L E E+ Y + +GL
Sbjct: 196 IRDEAVHGYYIGYKFQKGLERVSEAERAELKDYTFNLLFELYDNEVEYTQDLY--DELGL 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 254 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILAALSPNADENHDFFSGSGSSYV 312
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 313 IGKAVNTEDDDWD 325
>gi|315445193|ref|YP_004078072.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Mycobacterium sp. Spyr1]
gi|315263496|gb|ADU00238.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Mycobacterium sp. Spyr1]
Length = 320
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y + VGL
Sbjct: 190 IRDEAVHGYYIGYKFQKGLALADDATRQELKDYTYELLFELYDNEVEYTQDLY--DEVGL 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 248 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGSSYV 306
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 307 IGKAVVTEDEDWD 319
>gi|145224865|ref|YP_001135543.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
gilvum PYR-GCK]
gi|145217351|gb|ABP46755.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Mycobacterium gilvum PYR-GCK]
Length = 320
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y + VGL
Sbjct: 190 IRDEAVHGYYIGYKFQKGLALADDATRQELKDYTYELLFELYDNEVEYTQDLY--DEVGL 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 248 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGSSYV 306
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 307 IGKAVITEDEDWD 319
>gi|158079504|ref|YP_001504317.1| putative ribonucleotide reductase [Enterococcus phage phiEF24C]
gi|157890348|dbj|BAF81476.1| putative ribonucleotide reductase [Enterococcus phage phiEF24C]
Length = 327
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + P KE +Q + + E Y E +G
Sbjct: 190 IRDESVHGTYIGYKYQLGFNQLPETEQKEMEQWVIDLAFKLWENETQYTAELY--SEIGW 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
++++ N+ +G+ PLF T NP M+ + +FF
Sbjct: 248 T-KDVNTFLEYNLNKALANLGMNPLFPTTSADVNPIV-MNGISTTTSNHDFF 297
>gi|163842202|ref|YP_001626607.1| ribonucleotide-diphosphate reductase subunit beta [Renibacterium
salmoninarum ATCC 33209]
gi|162955678|gb|ABY25193.1| ribonucleoside-diphosphate reductase beta chain [Renibacterium
salmoninarum ATCC 33209]
Length = 325
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 53/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L+E EI Y H+ +
Sbjct: 195 IRDEAVHGYYIGYKFQKGLEKVSEERREEIKAYTFDLLYELYENEIQYTHDLYDAVGL-- 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A ++++ + AN+ +G E +F T NP + + + +FF + Y
Sbjct: 253 -AEDVKKFLHYNANKALMNLGYEAMFPSTVTDVNPAILSALSPNADENHDFFSGSGSSYV 311
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 312 IGKAVNTEDEDWD 324
>gi|13095637|ref|NP_076552.1| ribonucleotide reductase small subunit [Bovine herpesvirus 4]
gi|12802587|gb|AAK07979.1|AF318573_59 ribonucleotide reductase small subunit [Bovine herpesvirus 4]
Length = 305
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 40/127 (31%), Gaps = 14/127 (11%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH + N + K + EA +E + G +N
Sbjct: 189 RDELLHTRAAALLYNTMVSG----ADKPHMLWVHNLFKEAVEVEHEFIL-VKSSGVSAVN 243
Query: 62 APSCEQYMQFIANRRCHQIGL---EPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 118
+++ A+R I L + P K NFFE ++Y
Sbjct: 244 VDDIRSFLEATADRILKSINLPPIYGTPPPPKCPL----VYTGCVKNVNFFERDNSDYT- 298
Query: 119 GAELKWD 125
+ +K D
Sbjct: 299 -SSIKDD 304
>gi|183981661|ref|YP_001849952.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2
[Mycobacterium marinum M]
gi|183174987|gb|ACC40097.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2
[Mycobacterium marinum M]
Length = 324
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + E + + +L E E+ Y + VGL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLAAADEARRTELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 311 IGKAVVTQDEDWD 323
>gi|118617484|ref|YP_905816.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
ulcerans Agy99]
gi|118569594|gb|ABL04345.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2
[Mycobacterium ulcerans Agy99]
Length = 324
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + E + + +L E E+ Y + VGL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLAAADEARRTELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 311 IGKAVATQDEDWD 323
>gi|111023403|ref|YP_706375.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus
jostii RHA1]
gi|110822933|gb|ABG98217.1| ribonucleotide reductase [Rhodococcus jostii RHA1]
Length = 321
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + + + +L E E+ Y + VGL
Sbjct: 191 IRDEAVHGYYIGYKYQKGLEQLTEAERDDLKNYTFELLFELYDNEVDYTQDLY--DEVGL 248
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 249 T-EDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENHDFFSGSGSSYV 307
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 308 IGKAVNTEDEDWD 320
>gi|283457964|ref|YP_003362570.1| ribonucleotide reductase subunit beta [Rothia mucilaginosa DY-18]
gi|283133985|dbj|BAI64750.1| ribonucleotide reductase, beta subunit [Rothia mucilaginosa DY-18]
Length = 325
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 54/133 (40%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q + E ++ + +L+E E+AY H
Sbjct: 195 IRDEAVHGYYIGYKFQQGLAKESAERQAELKEYTFNLLYELYENEVAYTHSLYDGVGW-- 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVI--DLKKEKNFFETRVTEYQ 117
+ ++++ + AN+ +G EP+F + N P + + + + +FF + Y
Sbjct: 253 -SEDVKKFLHYNANKALMNLGYEPMFPASVTNVSPAILSALSPNADENHDFFSGSGSSYV 311
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 312 IGKAVNTEDEDWD 324
>gi|226365904|ref|YP_002783687.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus
opacus B4]
gi|226244394|dbj|BAH54742.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus opacus
B4]
Length = 321
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + + + +L E E+ Y + VGL
Sbjct: 191 IRDEAVHGYYIGYKYQKGLEQLTEAERDDLKNYTFELLFELYDNEVDYTQDLY--DEVGL 248
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 249 T-EDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENHDFFSGSGSSYV 307
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 308 IGKAVNTEDEDWD 320
>gi|194015457|ref|ZP_03054073.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
pumilus ATCC 7061]
gi|194012861|gb|EDW22427.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
pumilus ATCC 7061]
Length = 329
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 49/123 (39%), Gaps = 7/123 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +I + + S +L E E+AY + +
Sbjct: 200 IRDEAIHGVYVGLLAQEIYNRQTDDVRADLHEWSLGLLTELYENEVAYTDDVYGAVGL-- 257
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
A + ++++ AN+ +G + F NP + + K + +FF + Y++
Sbjct: 258 -AHDVKAFVRYNANKALMNLGFDAHFPDELVNPI--VINGLSTKTKAHDFFSMQGNGYKK 314
Query: 119 GAE 121
Sbjct: 315 ATV 317
>gi|225021562|ref|ZP_03710754.1| hypothetical protein CORMATOL_01583 [Corynebacterium matruchotii
ATCC 33806]
gi|224945553|gb|EEG26762.1| hypothetical protein CORMATOL_01583 [Corynebacterium matruchotii
ATCC 33806]
Length = 330
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 56/136 (41%), Gaps = 17/136 (12%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q + +E ++ + +L+E EIAY + +G
Sbjct: 200 IRDEAVHGYYIGYKFQQALAKESPARQEELKEYTFDVLYELYENEIAYTEDLY--DPLGW 257
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++++ AN+ + +G E LF E +S I + + +FF +
Sbjct: 258 T-EDVKRFLRYNANKALNNLGYEALFPADEC---QVSPAILSALSPNADENHDFFSGSGS 313
Query: 115 EYQQG-----AELKWD 125
Y G + WD
Sbjct: 314 SYVIGKAENTTDEDWD 329
>gi|322692090|ref|YP_004221660.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium
longum subsp. longum JCM 1217]
gi|320456946|dbj|BAJ67568.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium
longum subsp. longum JCM 1217]
Length = 330
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + Q + +L+E E+ Y + +
Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSLYDRVGL-- 257
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
E+++++ N+ +G LF NP + + + +FF + Y
Sbjct: 258 -TDDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILAALSPNADENHDFFSGSGSSYV 316
Query: 118 --QGAELKWD 125
+ E D
Sbjct: 317 MGKAEETDDD 326
>gi|305681191|ref|ZP_07403998.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
matruchotii ATCC 14266]
gi|305659396|gb|EFM48896.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
matruchotii ATCC 14266]
Length = 330
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 56/136 (41%), Gaps = 17/136 (12%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q + +E ++ + +L+E EIAY + +G
Sbjct: 200 IRDEAVHGYYIGYKFQQALAKESPARQEELKEYTFDVLYELYENEIAYTEDLY--DPLGW 257
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++++ AN+ + +G E LF E +S I + + +FF +
Sbjct: 258 T-EDVKRFLRYNANKALNNLGYEALFPADEC---QVSPAILSALSPNADENHDFFSGSGS 313
Query: 115 EYQQG-----AELKWD 125
Y G + WD
Sbjct: 314 SYVIGKAENTTDEDWD 329
>gi|23335914|ref|ZP_00121145.1| COG0208: Ribonucleotide reductase, beta subunit [Bifidobacterium
longum DJO10A]
gi|189440326|ref|YP_001955407.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
longum DJO10A]
gi|189428761|gb|ACD98909.1| Ribonucleotide reductase beta subunit [Bifidobacterium longum
DJO10A]
Length = 330
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + Q + +L+E E+ Y + +
Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSLYDRVDL-- 257
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
E+++++ N+ +G LF NP + + + +FF + Y
Sbjct: 258 -TDDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILAALSPNADENHDFFSGSGSSYV 316
Query: 118 --QGAELKWD 125
+ E D
Sbjct: 317 MGKAEETDDD 326
>gi|320095222|ref|ZP_08026924.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp.
oral taxon 178 str. F0338]
gi|319977850|gb|EFW09491.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp.
oral taxon 178 str. F0338]
Length = 319
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + E+ + + + ++L+E E Y + +GL
Sbjct: 189 IRDEAVHGYYIGYKYQLAVGESTQERRDDLKDYTYSLLYELYENEEQYTEDLY--DPLGL 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF + NP + + + +FF + Y
Sbjct: 247 T-EDVKKFLRYNANKALMNLGYEALFPHDATDVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 306 MGEVVDTEDEDWD 318
>gi|229823057|ref|ZP_04449126.1| hypothetical protein GCWU000282_00352 [Catonella morbi ATCC 51271]
gi|229787496|gb|EEP23610.1| hypothetical protein GCWU000282_00352 [Catonella morbi ATCC 51271]
Length = 336
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P E + + + E Y VG
Sbjct: 205 IRDESVHGTYTGYKFQLGYNELPEDQQAELKMWVYELCMDLYQNEAKYTQSLY--DQVGW 262
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF T +P M+ + +FF
Sbjct: 263 T-EKVKVFIRYNANKALQNLGFDPLFPDTAEDVDPIV-MNGISTGTSNHDFF 312
>gi|239622882|ref|ZP_04665913.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Bifidobacterium longum subsp. infantis CCUG 52486]
gi|312133660|ref|YP_004000999.1| nrdf [Bifidobacterium longum subsp. longum BBMN68]
gi|317482331|ref|ZP_07941351.1| ribonucleotide reductase [Bifidobacterium sp. 12_1_47BFAA]
gi|322690138|ref|YP_004209872.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
longum subsp. infantis 157F]
gi|239514879|gb|EEQ54746.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Bifidobacterium longum subsp. infantis CCUG 52486]
gi|291517762|emb|CBK71378.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Bifidobacterium longum subsp. longum F8]
gi|311772922|gb|ADQ02410.1| NrdF [Bifidobacterium longum subsp. longum BBMN68]
gi|316916211|gb|EFV37613.1| ribonucleotide reductase [Bifidobacterium sp. 12_1_47BFAA]
gi|320461474|dbj|BAJ72094.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium
longum subsp. infantis 157F]
Length = 330
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + Q + +L+E E+ Y + +
Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSLYDRVGL-- 257
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
E+++++ N+ +G LF NP + + + +FF + Y
Sbjct: 258 -TDDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILAALSPNADENHDFFSGSGSSYV 316
Query: 118 --QGAELKWD 125
+ E D
Sbjct: 317 MGKAEETDDD 326
>gi|116670901|ref|YP_831834.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter sp.
FB24]
gi|116611010|gb|ABK03734.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Arthrobacter sp. FB24]
Length = 324
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y H+ +
Sbjct: 194 IRDEAVHGYYIGYKFQKGLEKVSEEKRQEIKDYTFELLFELYENEVQYTHDLYDSVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A ++++ + AN+ +G E +F NP + + + +FF + Y
Sbjct: 252 -AEDVKKFLHYNANKALMNLGYEAMFPASVTDVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 311 IGKAVNTEDEDWD 323
>gi|332087397|gb|EGI92525.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
boydii 5216-82]
Length = 319
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + P +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKIPLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|325977861|ref|YP_004287577.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|325177789|emb|CBZ47833.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
Length = 320
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E F++ +L++ E Y VG
Sbjct: 189 IRDESVHGTYIGYKFQLGFNELSEEEQDNFREWMYDLLYQLYENEENYTKSLY--DGVGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 247 TDEVL-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 304
Query: 118 QGA--ELKWD 125
G+ ++ D
Sbjct: 305 LGSVEAMQDD 314
>gi|329117318|ref|ZP_08246035.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
parauberis NCFD 2020]
gi|326907723|gb|EGE54637.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
parauberis NCFD 2020]
Length = 321
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 7/124 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E ++F++ +L++ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSEEKQEDFKEWMYDLLYQLYENEENYTKSLY--DQVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGAE 121
G+
Sbjct: 304 LGSV 307
>gi|306833073|ref|ZP_07466204.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
bovis ATCC 700338]
gi|304424782|gb|EFM27917.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
bovis ATCC 700338]
Length = 320
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E F++ +L++ E Y VG
Sbjct: 189 IRDESVHGTYIGYKFQLGFNELSEEEQDNFREWMYDLLYQLYENEENYTKSLY--DGVGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 247 TDEVL-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 304
Query: 118 QGA--ELKWD 125
G+ ++ D
Sbjct: 305 LGSVEAMQDD 314
>gi|317495971|ref|ZP_07954333.1| ribonucleotide reductase [Gemella moribillum M424]
gi|316913875|gb|EFV35359.1| ribonucleotide reductase [Gemella moribillum M424]
Length = 322
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 47/123 (38%), Gaps = 15/123 (12%)
Query: 3 DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
DE++H +F ++ + E K + T+L + E+ Y + + +
Sbjct: 195 DETIHGSFTGFDAQEIFKTLTPEEQEKANK----EMYTLLLDLYENELKYTKDIYGEIGL 250
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEY 116
+ Y+++ ANR +G F+ E NP + ++ + +FF + Y
Sbjct: 251 ---FEEVKDYVEYNANRALANLGYPGYFEDKEINPI--IENAMNTSTKNHDFFSVKGDGY 305
Query: 117 QQG 119
Sbjct: 306 VVS 308
>gi|322831489|ref|YP_004211516.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
gi|321166690|gb|ADW72389.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
Length = 327
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + ++ ++++ ++ + EI Y E
Sbjct: 197 IRDEAVHGYYIGYKFQKALALESEERQRQIKEQAFDLIQDLYDNEIRYTEELYDGVGW-- 254
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++++ + AN+ +G E LF + NP + + + +FF + Y
Sbjct: 255 -SEDVKKFLHYNANKALMNLGYEALFPASMADVNPAILSALSPNADENHDFFSGSGSSYV 313
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 314 IGKAVNTEDEDWD 326
>gi|288904913|ref|YP_003430135.1| ribonucleoside-diphosphate reductase (minor subunit) [Streptococcus
gallolyticus UCN34]
gi|306830970|ref|ZP_07464132.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
gi|288731639|emb|CBI13196.1| ribonucleoside-diphosphate reductase (minor subunit) [Streptococcus
gallolyticus UCN34]
gi|304426993|gb|EFM30103.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
Length = 320
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E F++ +L++ E Y VG
Sbjct: 189 IRDESVHGTYIGYKFQLGFNELSEEEQDNFREWMYDLLYQLYENEENYTKSLY--DGVGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 247 TDEVL-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 304
Query: 118 QGA--ELKWD 125
G+ ++ D
Sbjct: 305 LGSVEAMQDD 314
>gi|260904342|ref|ZP_05912664.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacterium
linens BL2]
Length = 326
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + ++ E E+AY H+ +
Sbjct: 196 IRDEAVHGYYIGYKYQKGLESQSEERKQELKDYTMNLMFELYENEVAYTHDLYDSVGL-- 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A C+ ++ + AN+ +G E +F NP + + + +FF + Y
Sbjct: 254 -AEDCKMFLHYNANKALMNLGYEAMFPKEVTEVNPAILAALSPNSDENHDFFSGSGSSYV 312
Query: 118 --QGAELKWD 125
+ + D
Sbjct: 313 IGKAENTEDD 322
>gi|227547058|ref|ZP_03977107.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
longum subsp. infantis ATCC 55813]
gi|227212475|gb|EEI80364.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
longum subsp. infantis ATCC 55813]
Length = 330
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + Q + +L+E E+ Y + +
Sbjct: 200 IRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSLYDRVGL-- 257
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
E+++++ N+ +G LF NP + + + +FF + Y
Sbjct: 258 -TDDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILAALSPNADENHDFFSGSGSSYV 316
Query: 118 --QGAELKWD 125
+ E D
Sbjct: 317 MGKAEETDDD 326
>gi|222150734|ref|YP_002559887.1| ribonucleoside-diphosphate reductase minor subunit [Macrococcus
caseolyticus JCSC5402]
gi|222119856|dbj|BAH17191.1| ribonucleoside-diphosphate reductase minor subunit [Macrococcus
caseolyticus JCSC5402]
Length = 322
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 7/119 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F ++ E ++ +L E E +Y + +
Sbjct: 194 DESIHGVFTGLDAQSLRNEMTEDEKIRADKEMYDLLKELYANEESYTKMLYDRVGL---T 250
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
Y+Q+ N+ +G EP F+ NP + ++ + +FF + Y
Sbjct: 251 EDVLNYVQYNGNKALANLGFEPYFEEKGFNPI--IENALNTSTKNHDFFSVKGDGYVIA 307
>gi|225351964|ref|ZP_03742987.1| hypothetical protein BIFPSEUDO_03569 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157211|gb|EEG70550.1| hypothetical protein BIFPSEUDO_03569 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 330
Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + E + + +L+E E+ Y VGL
Sbjct: 200 IRDEAVHGYYIGYKYQKGLELVSEDKRGELRDYTYDLLNELYDNEVEYTRSLYE--PVGL 257
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
E+++++ N+ +G LF NP + + + +FF + Y
Sbjct: 258 TQD-VEKFLRYNGNKALMNLGYPALFPQEICDVNPSILAALSPNADENHDFFSGSGSSYV 316
Query: 118 QGAELKWD 125
G ++ D
Sbjct: 317 MGKSVETD 324
>gi|194433043|ref|ZP_03065326.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella
dysenteriae 1012]
gi|194418770|gb|EDX34856.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella
dysenteriae 1012]
gi|320180201|gb|EFW55137.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
ATCC 9905]
gi|332088601|gb|EGI93714.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
dysenteriae 155-74]
Length = 319
Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + P +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKIPLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|45259565|dbj|BAD12265.1| p53-inducible ribonucleotide reductase small subunit 2 short form
beta [Homo sapiens]
Length = 66
Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 88 YTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL 122
ENPF +M E I L+ + NFFE RV+EYQ+ A +
Sbjct: 19 QAENPFDFM-ENISLEGKTNFFEKRVSEYQRFAVM 52
>gi|331654159|ref|ZP_08355159.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli M718]
gi|331047541|gb|EGI19618.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli M718]
Length = 319
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILTALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|15827930|ref|NP_302193.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
leprae TN]
gi|221230407|ref|YP_002503823.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
leprae Br4923]
gi|14195114|sp|Q9CBQ2|RIR2_MYCLE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
AltName: Full=Ribonucleotide reductase small subunit
gi|13093483|emb|CAC30684.1| ribonucleotide reductase small subunit [Mycobacterium leprae]
gi|219933514|emb|CAR71826.1| ribonucleotide reductase small subunit [Mycobacterium leprae
Br4923]
Length = 325
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + E ++ + +L E E+ Y + + +
Sbjct: 195 IRDEAVHGYYIGYKFQRGLVLVDDARRAELKEYTYELLFELYDNEVEYTQDLYDRVGL-- 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 253 -TEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGSSYV 311
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 312 IGKAVVTEDEDWD 324
>gi|269794349|ref|YP_003313804.1| ribonucleoside-diphosphate reductase class Ib subunit beta
[Sanguibacter keddieii DSM 10542]
gi|269096534|gb|ACZ20970.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Sanguibacter keddieii DSM 10542]
Length = 325
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + E + + +L E E+ Y + +
Sbjct: 195 IRDEAVHGYYIGYKYQKGLEKLSPAERDEMKAYTFELLFELYENEVQYTADLYDGVGL-- 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 253 -TEDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENHDFFSGSGSSYV 311
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 312 IGKAVNTEDEDWD 324
>gi|227542806|ref|ZP_03972855.1| ribonucleoside-diphosphate reductase [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227181432|gb|EEI62404.1| ribonucleoside-diphosphate reductase [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 335
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 51/136 (37%), Gaps = 17/136 (12%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + +++ E + + + + E Y + +G
Sbjct: 205 IRDEAVHGYYIGYKYQRMQDNLSQAEKDELKDYTYDLTLDLYDNEEQYTEDMY--DELGW 262
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++++ AN+ + +G E L+ E +S I + + +FF +
Sbjct: 263 T-EDVKRFLRYNANKALNNLGYEALYPSDETR---VSPAILSALSPNADENHDFFSGSGS 318
Query: 115 EYQQGAE-----LKWD 125
Y GA WD
Sbjct: 319 SYVIGAVENTEDADWD 334
>gi|227488208|ref|ZP_03918524.1| ribonucleoside-diphosphate reductase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227091778|gb|EEI27090.1| ribonucleoside-diphosphate reductase [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 335
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 51/136 (37%), Gaps = 17/136 (12%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + +++ E + + + + E Y + +G
Sbjct: 205 IRDEAVHGYYIGYKYQRMQDNLSQAEKDELKDYTYDLTLDLYDNEEQYTEDMY--DELGW 262
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++++ AN+ + +G E L+ E +S I + + +FF +
Sbjct: 263 T-EDVKRFLRYNANKALNNLGYEALYPSDETR---VSPAILSALSPNADENHDFFSGSGS 318
Query: 115 EYQQGAE-----LKWD 125
Y GA WD
Sbjct: 319 SYVIGAVENTEDADWD 334
>gi|227494314|ref|ZP_03924630.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces
coleocanis DSM 15436]
gi|226832048|gb|EEH64431.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces
coleocanis DSM 15436]
Length = 322
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 49/122 (40%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + E+ +E + + +L+E E + + +GL
Sbjct: 192 IRDEAVHGYYIGYKYQLGVRESSEARQQELKDYTFDLLYELYDNEEQFTEDLY--DPLGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF NP S + + +FF + Y
Sbjct: 250 T-EDVKKFLRYNANKALMNLGYEALFPAESCDVNPAILASLSPNADENHDFFSGSGSSYV 308
Query: 118 QG 119
G
Sbjct: 309 IG 310
>gi|159184148|ref|NP_353105.2| ribonucleotide-diphosphate reductase subunit beta [Agrobacterium
tumefaciens str. C58]
gi|159139483|gb|AAK85890.2| ribonucleoside-diphosphate reductase 2 beta chain [Agrobacterium
tumefaciens str. C58]
Length = 324
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E Y + +
Sbjct: 194 IRDEAVHGYYIGYKFQRALDRLGEAQRQEIKDFAFDLLLELYDNEAKYTEDLYDGVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+Q++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 252 -TEDVKQFLHYNANKALMNLGYEALFPAEACRVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 311 IGKAVATEDEDWD 323
>gi|86148040|ref|ZP_01066342.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
MED222]
gi|85834173|gb|EAQ52329.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
MED222]
Length = 320
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 10/131 (7%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + ++ +++ +E Y VGL
Sbjct: 190 IRDEAIHGYYIGYKFQLAYQSLSEEEQARVKDEAYSLMFSLYEIETQYTESLY--DPVGL 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVI-DLKKEKNFFETRVTEY 116
+ ++ + AN+ +G E LF NP M+ + + + +FF + Y
Sbjct: 248 T-EDVKHFLHYNANKALMNLGFEALFPDELCQVNPAI-MAALSPNADENHDFFSGSGSSY 305
Query: 117 Q--QGAELKWD 125
+ + D
Sbjct: 306 VIGKAVATEDD 316
>gi|108798796|ref|YP_638993.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
sp. MCS]
gi|119867913|ref|YP_937865.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
sp. KMS]
gi|126434397|ref|YP_001070088.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
sp. JLS]
gi|108769215|gb|ABG07937.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Mycobacterium sp. MCS]
gi|119694002|gb|ABL91075.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Mycobacterium sp. KMS]
gi|126234197|gb|ABN97597.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Mycobacterium sp. JLS]
Length = 320
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + E + + +L E E+ Y + VGL
Sbjct: 190 IRDEAVHGYYIGYKFQKGLALQDPATQAELKDYTYELLFELYDNEVEYTQDLY--DSVGL 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 248 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGSSYV 306
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 307 IGKAVVTEDEDWD 319
>gi|329767978|ref|ZP_08259489.1| ribonucleoside-diphosphate reductase [Gemella haemolysans M341]
gi|328838463|gb|EGF88071.1| ribonucleoside-diphosphate reductase [Gemella haemolysans M341]
Length = 322
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 40/123 (32%), Gaps = 15/123 (12%)
Query: 3 DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
DE++H +F ++ + E KE + + E
Sbjct: 195 DETIHGSFTGFDAQELFKTLTPEEQERAEKEMYKLLLDLYENELKYTKDIYDEI------ 248
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEY 116
+ Y+++ ANR +G F+ E NP + ++ + +FF + Y
Sbjct: 249 -GLYEDVKDYVEYNANRALANLGYPGYFEDKEINPI--IENAMNTNTKNHDFFSVKGDGY 305
Query: 117 QQG 119
Sbjct: 306 VVS 308
>gi|218709884|ref|YP_002417505.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
splendidus LGP32]
gi|218322903|emb|CAV19080.1| Ribonucleoside-diphosphate reductase, beta subunit [Vibrio
splendidus LGP32]
Length = 323
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 10/131 (7%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + ++ +++ +E Y VGL
Sbjct: 193 IRDEAIHGYYIGYKFQLAYQSLSEEEQARVKDEAYSLMFSLYEIETQYTESLY--DPVGL 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVI-DLKKEKNFFETRVTEY 116
+ ++ + AN+ +G E LF NP M+ + + + +FF + Y
Sbjct: 251 T-EDVKHFLHYNANKALMNLGFEALFPDELCQVNPAI-MAALSPNADENHDFFSGSGSSY 308
Query: 117 Q--QGAELKWD 125
+ + D
Sbjct: 309 VIGKAVATEDD 319
>gi|296118681|ref|ZP_06837257.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
ammoniagenes DSM 20306]
gi|295968170|gb|EFG81419.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
ammoniagenes DSM 20306]
Length = 329
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 54/133 (40%), Gaps = 14/133 (10%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + Q + +E++ + ++++ E+ Y + +G
Sbjct: 199 IRDESVHGYYIGYKYQQGVKKLSEEKQQEYKDYTFDLMYDLYENELEYTEDIYDD--LGW 256
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++++ AN+ + +G E LF E +S I + + +FF +
Sbjct: 257 T-EDVKRFLRYNANKALNNLGYEGLFPTDETK---VSPAILSSLSPNADENHDFFSGSGS 312
Query: 115 EYQ--QGAELKWD 125
Y + E D
Sbjct: 313 SYVIGKAEETVDD 325
>gi|328958552|ref|YP_004375938.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
sp. 17-4]
gi|328674876|gb|AEB30922.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
sp. 17-4]
Length = 318
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 8/123 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + +L + E+AY E +
Sbjct: 188 IRDESVHGTYLGYKFQLTYNELPEEEQNKLLDWMYPLLEDLMENELAYTEEIYSHIGI-- 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEKNFFETRVTEY 116
A + ++++ AN+ +G + + NP M+ + +FF Y
Sbjct: 246 -AEDVKTFVRYNANKSLQNMGFPAYYDNADLADVNPIV-MNGISIETSNHDFFSQVGAGY 303
Query: 117 QQG 119
G
Sbjct: 304 LMG 306
>gi|119961248|ref|YP_948075.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter
aurescens TC1]
gi|119948107|gb|ABM07018.1| ribonucleoside-diphosphate reductase beta chain [Arthrobacter
aurescens TC1]
Length = 324
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y H+ +
Sbjct: 194 IRDEAVHGYYIGYKFQKGLEKVSEARKQEIKDYTFELLFELYENEVQYTHDLYDGVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A ++++ + AN+ +G E +F NP + + + +FF + Y
Sbjct: 252 -AEDVKKFLHYNANKALMNLGYEAMFPASVTDVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAELK 123
G +
Sbjct: 311 IGKAVN 316
>gi|261343568|ref|ZP_05971213.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
rustigianii DSM 4541]
gi|282568717|gb|EFB74252.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
rustigianii DSM 4541]
Length = 323
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 14/133 (10%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + E ++ + ++L + EI Y E VG
Sbjct: 193 IRDEAIHGYYIGYKFQKSLATYNEQQQNEIKEFTFSLLFDLYENEIKYTQELY--DSVGW 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
+ + ++ + AN+ +G E LF +S I D + +FF +
Sbjct: 251 -SEDVKSFLHYNANKALMNLGYEALFPEA---ITQVSPEILSALSPDANENHDFFSGSGS 306
Query: 115 EYQ--QGAELKWD 125
Y + + D
Sbjct: 307 SYVIGKAVSTEDD 319
>gi|3068719|gb|AAC14561.1| ribonucleoside diphosphate reductase small subunit [Corynebacterium
ammoniagenes]
Length = 329
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 54/133 (40%), Gaps = 14/133 (10%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + Q + +E++ + ++++ EI Y + +G
Sbjct: 199 IRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIYDD--LGW 256
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++++ AN+ + +G E LF E +S I + + +FF +
Sbjct: 257 T-EDVKRFLRYNANKALNNLGYEGLFPTDETK---VSPAILSSLSPNADENHDFFSGSGS 312
Query: 115 EYQ--QGAELKWD 125
Y + + D
Sbjct: 313 SYVIGKAEDTTDD 325
>gi|284922618|emb|CBG35706.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
042]
Length = 319
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMKKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|319938784|ref|ZP_08013148.1| ribonucleoside-diphosphate reductase [Streptococcus anginosus
1_2_62CV]
gi|319811834|gb|EFW08100.1| ribonucleoside-diphosphate reductase [Streptococcus anginosus
1_2_62CV]
Length = 319
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + F++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQETFREWMYDLLYTLYENEEGYTETLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF T NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDTADDVNPIV-MNGISTGTSNHDFF 295
>gi|18158911|pdb|1KGN|A Chain A, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe
Containing, Form
gi|18158912|pdb|1KGN|B Chain B, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe
Containing, Form
gi|18158913|pdb|1KGN|C Chain C, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe
Containing, Form
gi|18158914|pdb|1KGN|D Chain D, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe
Containing, Form
gi|18158915|pdb|1KGO|A Chain A, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe
Containing, Form
gi|18158916|pdb|1KGO|B Chain B, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe
Containing, Form
gi|18158917|pdb|1KGO|C Chain C, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe
Containing, Form
gi|18158918|pdb|1KGO|D Chain D, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe
Containing, Form
gi|18158919|pdb|1KGP|A Chain A, R2f From Corynebacterium Ammoniagenes In Its Mn
Substituted Form
gi|18158920|pdb|1KGP|B Chain B, R2f From Corynebacterium Ammoniagenes In Its Mn
Substituted Form
gi|18158921|pdb|1KGP|C Chain C, R2f From Corynebacterium Ammoniagenes In Its Mn
Substituted Form
gi|18158922|pdb|1KGP|D Chain D, R2f From Corynebacterium Ammoniagenes In Its Mn
Substituted Form
gi|48425146|pdb|1OQU|A Chain A, A Protein Coordinated Tri-Nuclear Fe Complex Formed During
Soaking Of Crystals Of The Ribonucleotide Reductase R2f
Protein From Corynebacterium Ammoniagenes
gi|48425147|pdb|1OQU|B Chain B, A Protein Coordinated Tri-Nuclear Fe Complex Formed During
Soaking Of Crystals Of The Ribonucleotide Reductase R2f
Protein From Corynebacterium Ammoniagenes
gi|48425148|pdb|1OQU|C Chain C, A Protein Coordinated Tri-Nuclear Fe Complex Formed During
Soaking Of Crystals Of The Ribonucleotide Reductase R2f
Protein From Corynebacterium Ammoniagenes
gi|48425149|pdb|1OQU|D Chain D, A Protein Coordinated Tri-Nuclear Fe Complex Formed During
Soaking Of Crystals Of The Ribonucleotide Reductase R2f
Protein From Corynebacterium Ammoniagenes
gi|193506844|pdb|3DHZ|A Chain A, Apo (Iron Free) Structure Of C. Ammoniagenes R2 Protein
gi|193506845|pdb|3DHZ|B Chain B, Apo (Iron Free) Structure Of C. Ammoniagenes R2 Protein
gi|3077614|emb|CAA70766.1| ribonucleotide reductase subunit R2F [Corynebacterium ammoniagenes]
Length = 329
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 54/133 (40%), Gaps = 14/133 (10%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + Q + +E++ + ++++ EI Y + +G
Sbjct: 199 IRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIYDD--LGW 256
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++++ AN+ + +G E LF E +S I + + +FF +
Sbjct: 257 T-EDVKRFLRYNANKALNNLGYEGLFPTDETK---VSPAILSSLSPNADENHDFFSGSGS 312
Query: 115 EYQ--QGAELKWD 125
Y + + D
Sbjct: 313 SYVIGKAEDTTDD 325
>gi|320531976|ref|ZP_08032874.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
oral taxon 171 str. F0337]
gi|320135808|gb|EFW27858.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
oral taxon 171 str. F0337]
Length = 324
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + E+ +E + + +L E E Y + +GL
Sbjct: 194 IRDEAVHGYYIGYKYQLAVRESSPERQQELKDYTFELLMELYDNEEQYTEDLY--DELGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF NP S + + +FF + Y
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPADAVDVNPAILASLSPNADENHDFFSGSGSSYV 310
Query: 118 QGAE-----LKWD 125
G WD
Sbjct: 311 MGTAEATQDEDWD 323
>gi|319891738|ref|YP_004148613.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
[Staphylococcus pseudintermedius HKU10-03]
gi|317161434|gb|ADV04977.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
[Staphylococcus pseudintermedius HKU10-03]
gi|323465093|gb|ADX77246.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
pseudintermedius ED99]
Length = 320
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 5/118 (4%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F ++ E ++ ++ +L + E +Y +GL
Sbjct: 194 DESIHGVFTGLDAQSLRNELSESEKQKADKEMYQLLEDLYANEASYTRSLY--DPIGLTD 251
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
Y+++ N+ +G EP F+ E P + +D + +FF + Y
Sbjct: 252 DVM-NYVRYNGNKALSNLGFEPYFEEREFS-PIIENALDTSTKNHDFFSVKGDGYVLA 307
>gi|227505793|ref|ZP_03935842.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
6940]
gi|227197639|gb|EEI77687.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
6940]
Length = 318
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 50/133 (37%), Gaps = 14/133 (10%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q + + + ++ + EI Y + +G
Sbjct: 188 IRDEAVHGYYIGYKYQQAVKQLNPAQQQGLKDSVFDLVFDLYDNEITYTEKIY--DALGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++++ AN+ + +G E LF E + I D + +FF +
Sbjct: 246 T-EDVKRFLRYNANKALNNLGYEGLFPSDECR---VDPAILSSLAPDANETHDFFSGSGS 301
Query: 115 EYQ--QGAELKWD 125
Y + E + D
Sbjct: 302 SYVIGKAEETQDD 314
>gi|326772780|ref|ZP_08232064.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces
viscosus C505]
gi|326637412|gb|EGE38314.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces
viscosus C505]
Length = 325
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + E+ +E + + +L E E Y + +GL
Sbjct: 195 IRDEAVHGYYIGYKYQLAVRESSPERQQELKDYTFDLLMELYDNEEQYTEDLY--DELGL 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF NP S + + +FF + Y
Sbjct: 253 T-EDVKKFLRYNANKALMNLGYEALFPADAVDVNPAILASLSPNADENHDFFSGSGSSYV 311
Query: 118 QGAE-----LKWD 125
G WD
Sbjct: 312 MGTAEATQDEDWD 324
>gi|254820788|ref|ZP_05225789.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
intracellulare ATCC 13950]
Length = 324
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y + + +
Sbjct: 194 IRDEAVHGYYIGYKFQRGLALVDDARKQELKDYTYELLFELYDNEVEYTQDLYDEVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 252 -TEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 311 IGKAVVTEDEDWD 323
>gi|221055321|ref|XP_002258799.1| Ribonucleotide reductase small subunit [Plasmodium knowlesi strain
H]
gi|193808869|emb|CAQ39572.1| Ribonucleotide reductase small subunit,putative [Plasmodium
knowlesi strain H]
Length = 335
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE LH +F + N HL K ++ A LE +A E + + +
Sbjct: 215 RDEYLHGDFSVMCCN-------HLNNKLKYERLLDYFKMAVKLEYQFAIEMLDLSVLKIK 267
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95
+ +++++A+ + F ++ PF W
Sbjct: 268 KEQVKSFLEYLADTMLVNLKHPKYFN-SKYPFTW 300
>gi|296171158|ref|ZP_06852606.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295894294|gb|EFG74049.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 324
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + E + + +L E E+ Y + VGL
Sbjct: 194 IRDEAVHGYYIGYKYQRGLALVDEAKRAELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 311 IGKAVVTEDEDWD 323
>gi|86156146|gb|ABC86791.1| ribonucleotide reductase beta subunit [Borrelia turicatae]
Length = 321
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 53/122 (43%), Gaps = 9/122 (7%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + + + + +++ +L LE AY + +GL
Sbjct: 192 LRDESVHGVFVGLLAQEEFNKMTSREQEFAYKEAMFILDRLYDLEKAYTKDLY--SSIGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116
+ + + ++++ A++ +G EP F + NP + + + +FF T+ Y
Sbjct: 250 ES-AVDVFVRYNADKALMNLGFEPTFNIQDIDVNPL--VLNGLRTDTKTHDFFSTKGNGY 306
Query: 117 QQ 118
+
Sbjct: 307 IK 308
>gi|327489434|gb|EGF21227.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sanguinis SK1058]
Length = 319
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|325675841|ref|ZP_08155525.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
ATCC 33707]
gi|325553812|gb|EGD23490.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
ATCC 33707]
Length = 335
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y + VGL
Sbjct: 205 IRDEAVHGYYIGYKYQRGLERVTEAEREELKNYTFELLFELYDNEVEYTQDLY--DEVGL 262
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 263 T-EDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENHDFFSGSGSSYV 321
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 322 IGKAVNTEDDDWD 334
>gi|254776333|ref|ZP_05217849.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
avium subsp. avium ATCC 25291]
Length = 320
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y + VGL
Sbjct: 190 IRDEAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVEYTQDLY--DEVGL 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 248 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGSSYV 306
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 307 IGKAVVTEDEDWD 319
>gi|125717616|ref|YP_001034749.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sanguinis SK36]
gi|323352633|ref|ZP_08087603.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sanguinis VMC66]
gi|125497533|gb|ABN44199.1| Ribonucleoside-diphosphate reductase 2, beta subunit, putative
[Streptococcus sanguinis SK36]
gi|322121669|gb|EFX93415.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sanguinis VMC66]
gi|325688330|gb|EGD30349.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sanguinis SK72]
gi|325690076|gb|EGD32080.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sanguinis SK115]
Length = 319
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|258622932|ref|ZP_05717948.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus
VM573]
gi|258624605|ref|ZP_05719543.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus
VM603]
gi|262165762|ref|ZP_06033499.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio
mimicus VM223]
gi|262171415|ref|ZP_06039093.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio
mimicus MB-451]
gi|258583152|gb|EEW07963.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus
VM603]
gi|258584871|gb|EEW09604.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus
VM573]
gi|261892491|gb|EEY38477.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio
mimicus MB-451]
gi|262025478|gb|EEY44146.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio
mimicus VM223]
Length = 323
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + + ++L + E +Y VGL
Sbjct: 193 IRDEAVHGYYIGYKFQLAYRQLDEAQQAQIKDYAFSLLFDLYEAEASYTEFLY--DPVGL 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 251 T-EEVKHFLHYNANKALMNLGFEPLFPEEVCEVNPAILAALSPNADENHDFFSGSGSSYV 309
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 310 IGQAVATQDEDWD 322
>gi|325066257|ref|ZP_08124930.1| Ribonucleoside-diphosphate reductase [Actinomyces oris K20]
Length = 324
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + E+ E + + +L E E Y + +GL
Sbjct: 194 IRDEAVHGYYIGYKYQLAVRESSPERQAELKDYTFELLMELYDNEEQYTEDLY--DELGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF NP S + + +FF + Y
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPADAVDVNPAILASLSPNADENHDFFSGSGSSYV 310
Query: 118 QGAE-----LKWD 125
G WD
Sbjct: 311 MGTAEATQDEDWD 323
>gi|225870271|ref|YP_002746218.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus equi
subsp. equi 4047]
gi|225699675|emb|CAW93380.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptococcus equi subsp. equi 4047]
Length = 319
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 45/130 (34%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E + + +L++ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSESEQESLRDWMYDLLYQLYENEEQYTKTLY--DEVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGA--ELKWD 125
G + D
Sbjct: 304 LGTVEAMTDD 313
>gi|163791218|ref|ZP_02185634.1| ribonucleotide-diphosphate [Carnobacterium sp. AT7]
gi|159873488|gb|EDP67576.1| ribonucleotide-diphosphate [Carnobacterium sp. AT7]
Length = 320
Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + P +E + + +L + E+ YA +G
Sbjct: 188 LRDESVHGTYIGYKFQIAYNQLPDNEKEEMKNWTYELLFKLYQNEVKYAEYLY--DEIGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF T N M+ + +FF
Sbjct: 246 T-ERVKVFLRYNANKALQNLGFDPLFPDTANDVDPVIMNGISTGTSNHDFF 295
>gi|255327220|ref|ZP_05368295.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia
mucilaginosa ATCC 25296]
gi|255295838|gb|EET75180.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia
mucilaginosa ATCC 25296]
Length = 325
Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 54/133 (40%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + E ++ + +L+E E+AY H
Sbjct: 195 IRDEAVHGYYIGYKFQRGLAKESAERQAELKEYTFNLLYELYENEVAYTHSLYDGVGW-- 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVI--DLKKEKNFFETRVTEYQ 117
+ ++++ + AN+ +G EP+F T N P + + + + +FF + Y
Sbjct: 253 -SEDVKKFLHYNANKALMNLGYEPMFPATVTNVSPAILSALSPNADENHDFFSGSGSSYV 311
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 312 IGKAVNTEDEDWD 324
>gi|329945141|ref|ZP_08293009.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
oral taxon 170 str. F0386]
gi|328529340|gb|EGF56255.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
oral taxon 170 str. F0386]
Length = 324
Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + E+ E + + +L E E Y + +GL
Sbjct: 194 IRDEAVHGYYIGYKYQLAVRESSPERQAELKDYTFELLMELYDNEEQYTEDLY--DELGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF NP S + + +FF + Y
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPADAVDVNPAILASLSPNADENHDFFSGSGSSYV 310
Query: 118 QGAE-----LKWD 125
G WD
Sbjct: 311 MGTAEATQDEDWD 323
>gi|327458665|gb|EGF05013.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sanguinis SK1057]
Length = 319
Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|325694009|gb|EGD35927.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sanguinis SK150]
Length = 319
Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|227496669|ref|ZP_03926945.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces
urogenitalis DSM 15434]
gi|226833817|gb|EEH66200.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces
urogenitalis DSM 15434]
Length = 324
Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + E+ E + + +L E E Y + +GL
Sbjct: 194 IRDEAVHGYYIGYKYQLAVRESSPQRQAELKDYTFDLLMELYDNEEQYTEDLY--DELGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF NP S + + +FF + Y
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPADAVDVNPAILASLSPNADENHDFFSGSGSSYV 310
Query: 118 QGAE-----LKWD 125
G WD
Sbjct: 311 IGTAEATEDEDWD 323
>gi|289551411|ref|YP_003472315.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
[Staphylococcus lugdunensis HKU09-01]
gi|289180942|gb|ADC88187.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
[Staphylococcus lugdunensis HKU09-01]
Length = 322
Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 46/119 (38%), Gaps = 7/119 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F ++ E ++ ++ +L + E++Y H +
Sbjct: 194 DESIHGVFTGIDAQSLRNELSENEKQQADKEMYVLLEDLYSNEVSYTHMLYDDIGL---T 250
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
Y+++ N+ +G +P F+ + NP + +D + +FF + Y
Sbjct: 251 EDVLNYVKYNGNKALSNLGFDPYFEEKDFNPI--IENALDTTTKNHDFFSVKGDGYTLA 307
>gi|315658919|ref|ZP_07911786.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
lugdunensis M23590]
gi|315496043|gb|EFU84371.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
lugdunensis M23590]
Length = 322
Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 46/119 (38%), Gaps = 7/119 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES+H F ++ E ++ ++ +L + E++Y H +
Sbjct: 194 DESIHGVFTGIDAQSLRNELSENEKQQADKEMYVLLEDLYSNEVSYTHMLYDDIGL---T 250
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
Y+++ N+ +G +P F+ + NP + +D + +FF + Y
Sbjct: 251 EDVLNYVKYNGNKALSNLGFDPYFEEKDFNPI--IENALDTTTKNHDFFSVKGDGYTLA 307
>gi|330941351|gb|EGH44203.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
syringae pv. pisi str. 1704B]
Length = 317
Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/27 (88%), Positives = 26/27 (96%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWT 27
+RDES+HLNFGIDVINQIKIENPHLW
Sbjct: 291 LRDESMHLNFGIDVINQIKIENPHLWD 317
>gi|330908707|gb|EGH37221.1| ribonucleotide reductase of class 1b (aerobic), beta subunit
[Escherichia coli AA86]
Length = 319
Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQARHEELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|307944765|ref|ZP_07660103.1| ribonucleoside-diphosphate reductase, beta subunit [Roseibium sp.
TrichSKD4]
gi|307771979|gb|EFO31202.1| ribonucleoside-diphosphate reductase, beta subunit [Roseibium sp.
TrichSKD4]
Length = 329
Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 51/134 (38%), Gaps = 13/134 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + +++ +E + + +++ + +E Y +
Sbjct: 199 IRDEAVHGYYIGYKFQRMQETLSEAERQEIKDFAFSLMFDLYEIEGKYTESLYDGVGL-- 256
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVI-DLKKEKNFFETRVTEY 116
+ ++ + AN+ +G E LF NP M+ + + + +FF + Y
Sbjct: 257 -TEDVKHFLHYNANKALMNLGYEALFPDSVCQVNPAI-MAALSPNADENHDFFSGSGSSY 314
Query: 117 QQGAEL-----KWD 125
G + WD
Sbjct: 315 VIGKAVATEDEDWD 328
>gi|310816082|ref|YP_003964046.1| ribonucleoside-diphosphate reductase, beta subunit
[Ketogulonicigenium vulgare Y25]
gi|308754817|gb|ADO42746.1| ribonucleoside-diphosphate reductase, beta subunit
[Ketogulonicigenium vulgare Y25]
Length = 317
Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 48/122 (39%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
++DE++H + P +E + + +L + +E +YA + +
Sbjct: 187 IKDEAVHGYYIGYKFQLGYALLPEAEKEELKGFAYDLLLQLYEIECSYAADLYDGIGL-- 244
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+Q++ + AN+ +G +P+F NP + D + +FF + Y
Sbjct: 245 -TEDVKQFLHYNANKSLMNLGFDPIFPDEITNFNPAVLAALAPDANENHDFFSGSGSSYV 303
Query: 118 QG 119
G
Sbjct: 304 IG 305
>gi|300941043|ref|ZP_07155562.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 21-1]
gi|300454207|gb|EFK17700.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 21-1]
Length = 319
Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISQAQREELKNFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|327468920|gb|EGF14392.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sanguinis SK330]
Length = 319
Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLAFNELPEDEQNKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|312140539|ref|YP_004007875.1| ribonucleoside-diphosphate reductase nrdf [Rhodococcus equi 103S]
gi|311889878|emb|CBH49195.1| ribonucleoside-diphosphate reductase NrdF [Rhodococcus equi 103S]
Length = 329
Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y + VGL
Sbjct: 199 IRDEAVHGYYIGYKYQRGLERVTEAEREELKNYTFELLFELYDNEVEYTQDLY--DEVGL 256
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 257 T-EDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENHDFFSGSGSSYV 315
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 316 IGKAVNTEDDDWD 328
>gi|218296962|ref|ZP_03497648.1| ribonucleotide reductase [Thermus aquaticus Y51MC23]
gi|218242665|gb|EED09201.1| ribonucleotide reductase [Thermus aquaticus Y51MC23]
Length = 323
Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM-PKGFVGL 60
++E++H FG++++ ++ E P L+ + F ++ E E A +
Sbjct: 192 KEENIHGLFGVELLRLLREERPELFGEAFVEEVLRAAQELFRAEEALVDWIFAGGDTPWV 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
++++ N+ GL F+ + W + + K+ +FF R Y
Sbjct: 252 RGEEVLEFVKDRYNQVLALHGLPGPFQVRDEVLKDTAWFALELLADKDVDFFNKRSVAYA 311
Query: 118 Q 118
+
Sbjct: 312 R 312
>gi|215487997|ref|YP_002330428.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O127:H6 str. E2348/69]
gi|215266069|emb|CAS10489.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
[Escherichia coli O127:H6 str. E2348/69]
Length = 319
Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|324993305|gb|EGC25225.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sanguinis SK405]
gi|324995391|gb|EGC27303.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sanguinis SK678]
gi|325697177|gb|EGD39064.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sanguinis SK160]
gi|327461576|gb|EGF07907.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sanguinis SK1]
gi|327473300|gb|EGF18720.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sanguinis SK408]
Length = 319
Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|269957220|ref|YP_003327009.1| Ribonucleoside-diphosphate reductase [Xylanimonas cellulosilytica
DSM 15894]
gi|269305901|gb|ACZ31451.1| Ribonucleoside-diphosphate reductase [Xylanimonas cellulosilytica
DSM 15894]
Length = 326
Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + E + + +L E E+ Y +GL
Sbjct: 196 IRDEAVHGYYIGYKFQKGLALESQERQDEIKAYTFELLFELYENEVEYTEALYG--ELGL 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 254 T-EDVKKFLRYNANKALMNLGYEALFPKEETDVNPAILAALSPNADENHDFFSGSGSSYV 312
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 313 IGKAVDTTDDDWD 325
>gi|92112513|ref|YP_572441.1| ribonucleotide-diphosphate reductase subunit beta [Chromohalobacter
salexigens DSM 3043]
gi|91795603|gb|ABE57742.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Chromohalobacter salexigens DSM 3043]
Length = 326
Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 44/122 (36%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q +E + + +L E E+ Y +
Sbjct: 196 IRDEAVHGYYIGYKFQQALARESAERQQEIKDATFDLLLELYDNEVHYTESLYDDVGL-- 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G EPLF NP + ++ +FF + Y
Sbjct: 254 -TEEVKAFLHYNANKALMNLGYEPLFPGATEAVNPAILAALSPGAEENHDFFSGSGSSYV 312
Query: 118 QG 119
G
Sbjct: 313 IG 314
>gi|41409193|ref|NP_962029.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
avium subsp. paratuberculosis K-10]
gi|41398013|gb|AAS05643.1| NrdG [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 324
Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y + + +
Sbjct: 194 IRDEAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVEYTQDLYDEVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 252 -TEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 311 IGKAVVTEDEDWD 323
>gi|241888586|ref|ZP_04775893.1| ribonucleoside-diphosphate reductase, beta subunit [Gemella
haemolysans ATCC 10379]
gi|241864609|gb|EER68984.1| ribonucleoside-diphosphate reductase, beta subunit [Gemella
haemolysans ATCC 10379]
Length = 322
Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 41/123 (33%), Gaps = 15/123 (12%)
Query: 3 DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
DE++H +F +V + E KE + + + E
Sbjct: 195 DETIHGSFTGFDAQEVFKTLTAEEQERAEKEMYKLLLDLYENELVYTKDIYSEI------ 248
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEY 116
+ Y+++ ANR +G F+ E NP + ++ + +FF + Y
Sbjct: 249 -GLYEEVKDYVEYNANRALANLGYPGYFEDKEINPI--IENAMNTNTKNHDFFSVKGDGY 305
Query: 117 QQG 119
Sbjct: 306 VVS 308
>gi|240169547|ref|ZP_04748206.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
kansasii ATCC 12478]
Length = 320
Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + E + + +L E E+ Y + VGL
Sbjct: 190 IRDEAVHGYYIGYKFQRGLALVDEVKRAELKDYTYELLFELYDNEVEYTQDLY--DEVGL 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 248 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGSSYV 306
Query: 118 QG 119
G
Sbjct: 307 IG 308
>gi|313884792|ref|ZP_07818546.1| ribonucleoside-diphosphate reductase, beta subunit [Eremococcus
coleocola ACS-139-V-Col8]
gi|312619991|gb|EFR31426.1| ribonucleoside-diphosphate reductase, beta subunit [Eremococcus
coleocola ACS-139-V-Col8]
Length = 363
Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + +E +Q + E E Y +G
Sbjct: 189 LRDESVHGTYIGYKFQLGYNALSETDQEELKQWVFNLCFELYSNEEKYTSYIY--DELGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
++++ AN+ +G +PLF T NP M+ + +FF
Sbjct: 247 T-EEVNTFVRYNANKALQNLGFDPLFADTAEDVNPIV-MNGISTGTSNHDFF 296
>gi|118465359|ref|YP_883075.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
avium 104]
gi|118166646|gb|ABK67543.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
avium 104]
Length = 324
Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y + + +
Sbjct: 194 IRDEAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVEYTQDLYDEVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 252 -TEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 311 IGKAVVTEDEDWD 323
>gi|307704819|ref|ZP_07641714.1| ribonucleoside-diphosphate reductase 2 subunit beta [Streptococcus
mitis SK597]
gi|307708708|ref|ZP_07645171.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
mitis NCTC 12261]
gi|307709353|ref|ZP_07645811.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
mitis SK564]
gi|307615282|gb|EFN94492.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
mitis NCTC 12261]
gi|307619936|gb|EFN99054.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
mitis SK564]
gi|307621648|gb|EFO00690.1| ribonucleoside-diphosphate reductase 2 subunit beta [Streptococcus
mitis SK597]
Length = 320
Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|289167885|ref|YP_003446154.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
mitis B6]
gi|288907452|emb|CBJ22289.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
mitis B6]
Length = 321
Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 189 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 247 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 296
>gi|324005772|gb|EGB74991.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 57-2]
Length = 319
Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETTW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|328945482|gb|EGG39633.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sanguinis SK1087]
Length = 319
Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|218706176|ref|YP_002413695.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
UMN026]
gi|293406173|ref|ZP_06650099.1| ribonucleotide reductase beta subunit [Escherichia coli FVEC1412]
gi|298381910|ref|ZP_06991507.1| ribonucleoside-diphosphate reductase subunit beta [Escherichia coli
FVEC1302]
gi|300898656|ref|ZP_07116977.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 198-1]
gi|301019059|ref|ZP_07183270.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 69-1]
gi|331674197|ref|ZP_08374957.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli TA280]
gi|218433273|emb|CAR14173.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
[Escherichia coli UMN026]
gi|291426179|gb|EFE99211.1| ribonucleotide reductase beta subunit [Escherichia coli FVEC1412]
gi|298277050|gb|EFI18566.1| ribonucleoside-diphosphate reductase subunit beta [Escherichia coli
FVEC1302]
gi|300357684|gb|EFJ73554.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 198-1]
gi|300399412|gb|EFJ82950.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 69-1]
gi|331068291|gb|EGI39686.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli TA280]
Length = 319
Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKSQEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|322385107|ref|ZP_08058754.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
cristatus ATCC 51100]
gi|321270731|gb|EFX53644.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
cristatus ATCC 51100]
Length = 321
Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|319947340|ref|ZP_08021573.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
australis ATCC 700641]
gi|319746582|gb|EFV98842.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
australis ATCC 700641]
Length = 319
Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|322376536|ref|ZP_08051029.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
sp. M334]
gi|321282343|gb|EFX59350.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
sp. M334]
Length = 320
Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|307706628|ref|ZP_07643435.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus
mitis SK321]
gi|307618083|gb|EFN97243.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus
mitis SK321]
Length = 320
Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|328957625|ref|YP_004375011.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
sp. 17-4]
gi|328673949|gb|AEB29995.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
sp. 17-4]
Length = 320
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + P +E + + +L + E+ YA +G
Sbjct: 188 LRDESVHGTYIGYKFQIAFNQLPDDEKEEIKNWTYELLFKLYQNEVKYAEYLY--DEIGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF T N M+ + +FF
Sbjct: 246 T-ERVKVFLRYNANKALQNLGFDPLFPDTANDVDPVIMNGISTGTSNHDFF 295
>gi|54026269|ref|YP_120511.1| ribonucleotide-diphosphate reductase subunit beta [Nocardia
farcinica IFM 10152]
gi|54017777|dbj|BAD59147.1| putative ribonucleoside-diphosphate reductase beta subunit
[Nocardia farcinica IFM 10152]
Length = 320
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L+E E+ Y + VGL
Sbjct: 190 IRDEAVHGYYIGYKYQRGLEQVSEAEREELKNYTFELLYELYENEVEYTQDLY--DEVGL 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 248 T-EDVKTFLRYNANKALMNLGYEGLFPADETRVNPAILSALSPNADENHDFFSGSGSSYV 306
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 307 IGKAVNTEDEDWD 319
>gi|270292678|ref|ZP_06198889.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
sp. M143]
gi|270278657|gb|EFA24503.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
sp. M143]
Length = 322
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|24379140|ref|NP_721095.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
mutans UA159]
gi|290580850|ref|YP_003485242.1| putative ribonucleotide reductase small subunit [Streptococcus
mutans NN2025]
gi|24377045|gb|AAN58401.1|AE014910_5 putative ribonucleotide reductase, small subunit [Streptococcus
mutans UA159]
gi|254997749|dbj|BAH88350.1| putative ribonucleotide reductase small subunit [Streptococcus
mutans NN2025]
Length = 319
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 45/124 (36%), Gaps = 7/124 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E EF+ +L++ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSEEEQSEFRDWMYDLLYQLYENEELYTQTLY--DPVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGAE 121
G+
Sbjct: 304 LGSV 307
>gi|331266449|ref|YP_004326079.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
oralis Uo5]
gi|326683121|emb|CBZ00739.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
oralis Uo5]
Length = 320
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|312965591|ref|ZP_07779821.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
coli 2362-75]
gi|312289740|gb|EFR17630.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
coli 2362-75]
Length = 319
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSSSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|308177564|ref|YP_003916970.1| ribonucleoside-diphosphate reductase subunit beta [Arthrobacter
arilaitensis Re117]
gi|307745027|emb|CBT75999.1| ribonucleoside-diphosphate reductase beta chain [Arthrobacter
arilaitensis Re117]
Length = 324
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 51/136 (37%), Gaps = 17/136 (12%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +++E E+ Y H+
Sbjct: 194 IRDEAVHGYYIGYKFQKGLENETEERKQELKDYTFELMYELYENEVQYTHDL---YDPVG 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
+ ++++ + AN+ +G E +F T +S I + + +FF +
Sbjct: 251 LSEDVKKFLHYNANKALMNLGYEAMFPSTVTD---VSPAILAALSPNADENHDFFSGSGS 307
Query: 115 EYQQGAELK-----WD 125
Y G + WD
Sbjct: 308 SYVIGKAVNTEDEDWD 323
>gi|306829459|ref|ZP_07462649.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
mitis ATCC 6249]
gi|304428545|gb|EFM31635.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
mitis ATCC 6249]
Length = 320
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|293365329|ref|ZP_06612046.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
oralis ATCC 35037]
gi|306825287|ref|ZP_07458629.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sp. oral taxon 071 str. 73H25AP]
gi|307703869|ref|ZP_07640810.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus
oralis ATCC 35037]
gi|315613100|ref|ZP_07888010.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sanguinis ATCC 49296]
gi|291316779|gb|EFE57215.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
oralis ATCC 35037]
gi|304432723|gb|EFM35697.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sp. oral taxon 071 str. 73H25AP]
gi|307622704|gb|EFO01700.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus
oralis ATCC 35037]
gi|315314662|gb|EFU62704.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sanguinis ATCC 49296]
Length = 320
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|283835589|ref|ZP_06355330.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
youngae ATCC 29220]
gi|291068801|gb|EFE06910.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
youngae ATCC 29220]
Length = 319
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E Y E G
Sbjct: 189 IRDEAVHGYYIGYKYQKGLAHISESAREELKNFALDLLMELYDNEAQYTDELY--AETGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G E LF NP + + ++ +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEALFPPEMAEVNPAILAALSPNAEENHDFFSGSGSSYV 305
Query: 118 --QGAELKWD 125
+ E + D
Sbjct: 306 MGKAVETEDD 315
>gi|220912864|ref|YP_002488173.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter
chlorophenolicus A6]
gi|219859742|gb|ACL40084.1| Ribonucleoside-diphosphate reductase [Arthrobacter chlorophenolicus
A6]
Length = 324
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y H+ +
Sbjct: 194 IRDEAVHGYYIGYKFQRALETVSEERRQEIKDYTFELLFELYENEVQYTHDLYDGVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A ++++ + AN+ +G E +F NP + + + +FF + Y
Sbjct: 252 -AEDVKKFLHYNANKALMNLGYEAMFPASVTDVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 311 IGKAVNTEDEDWD 323
>gi|324990559|gb|EGC22495.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sanguinis SK353]
Length = 319
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLSFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DTVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|229818600|ref|YP_002880126.1| Ribonucleoside-diphosphate reductase [Beutenbergia cavernae DSM
12333]
gi|229564513|gb|ACQ78364.1| Ribonucleoside-diphosphate reductase [Beutenbergia cavernae DSM
12333]
Length = 326
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y + VGL
Sbjct: 196 IRDEAVHGYYIGYKFQRGLEALAPEQREEIKSYTYELLFELYENEVQYTEDLY--DEVGL 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 254 T-EDVKKFLRYNANKALMNLGYEALFPKDETDVNPAILAALSPNADENHDFFSGSGSSYV 312
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 313 IGKAVNTEDDDWD 325
>gi|312867164|ref|ZP_07727374.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
parasanguinis F0405]
gi|311097293|gb|EFQ55527.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
parasanguinis F0405]
Length = 321
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 190 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 248 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 297
>gi|262283137|ref|ZP_06060904.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sp. 2_1_36FAA]
gi|262261389|gb|EEY80088.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
sp. 2_1_36FAA]
Length = 319
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEDEQEKLKEWMYDLLYTLYENEEGYTETLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF T NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDTADDVNPIV-MNGISTGTSNHDFF 295
>gi|293415927|ref|ZP_06658567.1| ribonucleoside-diphosphate reductase [Escherichia coli B185]
gi|291432116|gb|EFF05098.1| ribonucleoside-diphosphate reductase [Escherichia coli B185]
Length = 319
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|331648397|ref|ZP_08349485.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli M605]
gi|331042144|gb|EGI14286.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli M605]
Length = 319
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQTRREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|157149762|ref|YP_001450838.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
gordonii str. Challis substr. CH1]
gi|157074556|gb|ABV09239.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
gordonii str. Challis substr. CH1]
Length = 319
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTETLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF T NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDTADDVNPIV-MNGISTGTSNHDFF 295
>gi|224283650|ref|ZP_03646972.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
bifidum NCIMB 41171]
gi|310288088|ref|YP_003939347.1| Ribonucleoside-diphosphate reductase beta chain [Bifidobacterium
bifidum S17]
gi|313140805|ref|ZP_07802998.1| ribonucleoside-diphosphate reductase subunit beta [Bifidobacterium
bifidum NCIMB 41171]
gi|309252025|gb|ADO53773.1| Ribonucleoside-diphosphate reductase beta chain [Bifidobacterium
bifidum S17]
gi|313133315|gb|EFR50932.1| ribonucleoside-diphosphate reductase subunit beta [Bifidobacterium
bifidum NCIMB 41171]
Length = 330
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E ++ + +L+E E+ Y + +
Sbjct: 200 IRDEAVHGYYIGYKYQRGLERVSDAKREEMREYTYNLLNELYDNEVEYTESLYERVGL-- 257
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
E+++++ N+ +G LF NP + + + +FF + Y
Sbjct: 258 -TDDVEKFLRYNGNKALMNLGYPALFPAEACDVNPAILAALSPNADENHDFFSGSGSSYV 316
Query: 118 QGAELKWD 125
G + D
Sbjct: 317 MGKAEETD 324
>gi|322389171|ref|ZP_08062732.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
parasanguinis ATCC 903]
gi|321144076|gb|EFX39493.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
parasanguinis ATCC 903]
Length = 321
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 190 IRDESVHGTYIGYKFQLGFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 248 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 297
>gi|311064961|ref|YP_003971687.1| ribonucleoside-diphosphate reductase subunit beta NrdF
[Bifidobacterium bifidum PRL2010]
gi|310867281|gb|ADP36650.1| NrdF Ribonucleoside-diphosphate reductase beta chain
[Bifidobacterium bifidum PRL2010]
Length = 330
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E ++ + +L+E E+ Y + +
Sbjct: 200 IRDEAVHGYYIGYKYQRGLERVSDAKREEMREYTYNLLNELYDNEVEYTESLYERVGL-- 257
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
E+++++ N+ +G LF NP + + + +FF + Y
Sbjct: 258 -TDDVEKFLRYNGNKALMNLGYPALFPAEACDVNPAILAALSPNADENHDFFSGSGSSYV 316
Query: 118 QGAELKWD 125
G + D
Sbjct: 317 MGKAEETD 324
>gi|296876816|ref|ZP_06900864.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
parasanguinis ATCC 15912]
gi|296432318|gb|EFH18117.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
parasanguinis ATCC 15912]
Length = 321
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 190 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 248 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 297
>gi|225868773|ref|YP_002744721.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus equi
subsp. zooepidemicus]
gi|225702049|emb|CAW99658.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptococcus equi subsp. zooepidemicus]
Length = 319
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E + + +L++ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSESEQESLRDWMYDLLYQLYENEEQYTKTLY--DEVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
++++ AN+ +G +PLF T NP M+ + +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295
>gi|281179683|dbj|BAI56013.1| ribonucleoside-diphosphate reductase beta subunit [Escherichia coli
SE15]
Length = 319
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|257069608|ref|YP_003155863.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Brachybacterium faecium DSM 4810]
gi|256560426|gb|ACU86273.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Brachybacterium faecium DSM 4810]
Length = 322
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + E + + ++L E E Y + VG
Sbjct: 192 IRDEAVHGYYIGYKYQKAVEKLSAERQAELKDYTFSLLMELYDNEEVYTEDIY--DPVGW 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++++ AN+ +G E LF NP S + + +FF + Y
Sbjct: 250 T-EDVKVFLRYNANKALMNLGYEGLFPQEATQVNPAILASLSPNADENHDFFSGSGSSYV 308
Query: 118 --QGAELKWD 125
+ E + D
Sbjct: 309 MGKAVETEDD 318
>gi|91212037|ref|YP_542023.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
UTI89]
gi|117624912|ref|YP_853853.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
APEC O1]
gi|218559668|ref|YP_002392581.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
S88]
gi|237706702|ref|ZP_04537183.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
3_2_53FAA]
gi|91073611|gb|ABE08492.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
UTI89]
gi|115514036|gb|ABJ02111.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
APEC O1]
gi|218366437|emb|CAR04189.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
[Escherichia coli S88]
gi|226899742|gb|EEH86001.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
3_2_53FAA]
gi|294492274|gb|ADE91030.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli IHE3034]
gi|315284934|gb|EFU44379.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 110-3]
gi|323951102|gb|EGB46978.1| ribonucleotide reductase [Escherichia coli H252]
gi|323957111|gb|EGB52836.1| ribonucleotide reductase [Escherichia coli H263]
Length = 319
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 50/126 (39%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNQEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|331684294|ref|ZP_08384886.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli H299]
gi|331077909|gb|EGI49115.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli H299]
Length = 319
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|171779596|ref|ZP_02920552.1| hypothetical protein STRINF_01433 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281698|gb|EDT47132.1| hypothetical protein STRINF_01433 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 144
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E + + +L++ E Y VG
Sbjct: 12 IRDESVHGTYIGYKFQLGFNELSEKEQDDLRDWMYDLLYQLYENEENYTKTLY--DQVGW 69
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 70 TEEVL-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 127
Query: 118 QGA--ELKWD 125
G+ ++ D
Sbjct: 128 LGSVEAMQDD 137
>gi|26249071|ref|NP_755111.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
CFT073]
gi|227888210|ref|ZP_04006015.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
83972]
gi|300986153|ref|ZP_07177743.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 45-1]
gi|301050518|ref|ZP_07197394.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 185-1]
gi|26109478|gb|AAN81681.1|AE016765_83 Ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
CFT073]
gi|227834850|gb|EEJ45316.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
83972]
gi|300297774|gb|EFJ54159.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 185-1]
gi|300407907|gb|EFJ91445.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 45-1]
gi|307554652|gb|ADN47427.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
ABU 83972]
gi|315290985|gb|EFU50350.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 153-1]
Length = 319
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVTAFLCYNANKALMNLGYEPLFPAGMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|116493227|ref|YP_804962.1| ribonucleotide-diphosphate reductase subunit beta [Pediococcus
pentosaceus ATCC 25745]
gi|116103377|gb|ABJ68520.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Pediococcus pentosaceus ATCC 25745]
Length = 317
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E +E + L++ E Y H VG
Sbjct: 188 LRDESVHGTYIGYKFQLGLKELGENEQQEIKDWMYNFLYDLYDNEEKYVHTLY--DQVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++ AN+ +G +PLF TE NP M+ + +FF
Sbjct: 246 TDEVL-TFTRYNANKALMNLGQDPLFPDTEADVNPIV-MNGISTGTSNHDFF 295
>gi|121602770|ref|YP_988676.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
bacilliformis KC583]
gi|120614947|gb|ABM45548.1| ribonucleoside-diphosphate reductase, beta subunit [Bartonella
bacilliformis KC583]
Length = 324
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + ML + +E Y + +GL
Sbjct: 194 IRDEAIHGYYIGYKFQLGFAKLNEAQKQEMKDFTFNMLFDLYNIECKYTEDLY--DSLGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 252 T-EDVKVFLHYNANKALMNLGFESLFPSEVCRVNPAILAALSPNSDENHDFFSGSGSSYV 310
Query: 118 QG 119
G
Sbjct: 311 IG 312
>gi|145296522|ref|YP_001139343.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
glutamicum R]
gi|140846442|dbj|BAF55441.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 334
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 54/132 (40%), Gaps = 12/132 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E ++ + +L++ E Y+ + +G
Sbjct: 204 IRDEAVHGYYIGYKYQKAVAKETPERQEELKEYTFDLLYDLYDNETQYSEDLYDD--LGW 261
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----NPFPWMSEVIDLKKEKNFFETRVTE 115
++++++ AN+ + +G E LF E N +S + + +FF +
Sbjct: 262 T-EDVKRFLRYNANKALNNLGYEGLFPADETKVSPNILSALSP--NADENHDFFSGSGSS 318
Query: 116 YQ--QGAELKWD 125
Y + + D
Sbjct: 319 YVIGKAENTEDD 330
>gi|5230837|gb|AAD41037.1|AF112536_1 ribonucleotide reductase beta-chain [Corynebacterium glutamicum]
Length = 334
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 55/132 (41%), Gaps = 12/132 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E ++ + +L++ E Y+ + +G
Sbjct: 204 IRDEAVHGYYIGYKYQKAVAKETPERQEELKEYTFDLLYDLYDNETQYSEDLYDD--LGW 261
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----NPFPWMSEVIDLKKEKNFFETRVTE 115
++++++IAN+ + +G E LF E N +S + + +FF +
Sbjct: 262 T-EDVKRFLRYIANKALNNLGYEGLFPADETKVSPNILSALSP--NADENHDFFSGSGSS 318
Query: 116 YQ--QGAELKWD 125
Y + + D
Sbjct: 319 YVIGKAENTEDD 330
>gi|320194816|gb|EFW69445.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
WV_060327]
Length = 319
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQEQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|110642801|ref|YP_670531.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
536]
gi|191171432|ref|ZP_03032981.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli F11]
gi|300990601|ref|ZP_07179251.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 200-1]
gi|110344393|gb|ABG70630.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
536]
gi|190908366|gb|EDV67956.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli F11]
gi|300305718|gb|EFJ60238.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 200-1]
gi|324014406|gb|EGB83625.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 60-1]
Length = 319
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQEQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|260869355|ref|YP_003235757.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
coli O111:H- str. 11128]
gi|257765711|dbj|BAI37206.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
coli O111:H- str. 11128]
gi|323180097|gb|EFZ65649.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
coli 1180]
Length = 319
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y +E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTNELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|19553723|ref|NP_601725.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
glutamicum ATCC 13032]
gi|62391364|ref|YP_226766.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
glutamicum ATCC 13032]
gi|15430572|dbj|BAB64405.1| ribonucleoside diphosphate reductase [Corynebacterium glutamicum]
gi|21325297|dbj|BAB99918.1| Ribonucleotide reductase beta subunit [Corynebacterium glutamicum
ATCC 13032]
gi|41326705|emb|CAF21187.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 2 BETA CHAIN [Corynebacterium
glutamicum ATCC 13032]
Length = 334
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 54/132 (40%), Gaps = 12/132 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E ++ + +L++ E Y+ + +G
Sbjct: 204 IRDEAVHGYYIGYKYQKAVAKETPERQEELKEYTFDLLYDLYDNETQYSEDLYDD--LGW 261
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----NPFPWMSEVIDLKKEKNFFETRVTE 115
++++++ AN+ + +G E LF E N +S + + +FF +
Sbjct: 262 T-EDVKRFLRYNANKALNNLGYEGLFPADETKVSPNILSALSP--NADENHDFFSGSGSS 318
Query: 116 YQ--QGAELKWD 125
Y + + D
Sbjct: 319 YVIGKAENTEDD 330
>gi|291284009|ref|YP_003500827.1| Ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
coli O55:H7 str. CB9615]
gi|290763882|gb|ADD57843.1| Ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
coli O55:H7 str. CB9615]
Length = 319
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISPGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|170017903|ref|YP_001728822.1| ribonucleotide reductase, beta subunit [Leuconostoc citreum KM20]
gi|169804760|gb|ACA83378.1| Ribonucleotide reductase, beta subunit [Leuconostoc citreum KM20]
Length = 324
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 7/119 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + P + Q +L+E E Y HE +G
Sbjct: 193 IRDESVHGTYIGYKFQIGFNKLPESESTALQSWMYDLLYELYENEEKYTHELYDD--LGW 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEY 116
++++ AN+ +G EP+F NP M+ + +FF Y
Sbjct: 251 T-EQVLTFLRYNANKALMNLGQEPMFPDGAEDVNPVV-MNGISTSTANHDFFSGVGNGY 307
>gi|309800432|ref|ZP_07694593.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
infantis SK1302]
gi|308115948|gb|EFO53463.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
infantis SK1302]
Length = 319
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ + +L+ E Y VG
Sbjct: 187 IRDESVHGTYIGYKFQLGFNELPEDEQEKLKDWMYDLLYTLYENEEGYTESLY--DGVGW 244
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 245 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 294
>gi|322387902|ref|ZP_08061509.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
infantis ATCC 700779]
gi|321141175|gb|EFX36673.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
infantis ATCC 700779]
Length = 320
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ + +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKDWMYDLLYTLYENEEGYTESLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|254819781|ref|ZP_05224782.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
intracellulare ATCC 13950]
Length = 322
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 50/135 (37%), Gaps = 15/135 (11%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + E ++ + +L+ EI YAH+ +G
Sbjct: 192 IRDEAVHGFYIGYKCQRGLAELSEPERSGHREYTYELLNALYTNEIDYAHDLY--DGLGW 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLF---KYTENP--FPWMSEVIDLKKEKNFFETRVTE 115
YM+F ANR +G EP+F NP + + +FF +
Sbjct: 250 TDDVLP-YMRFNANRALANLGYEPMFGPSDCRVNPAVLSALDP--GAGENHDFFSGSGSS 306
Query: 116 YQQGAE-----LKWD 125
Y G+ WD
Sbjct: 307 YVIGSHQATEDADWD 321
>gi|157148214|ref|YP_001455533.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter
koseri ATCC BAA-895]
gi|157085419|gb|ABV15097.1| hypothetical protein CKO_04025 [Citrobacter koseri ATCC BAA-895]
Length = 319
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + E + + +L E E Y E G
Sbjct: 189 IRDEAVHGYYIGYKYQKGLEKLSESERDELKHFALDLLMELYDNESRYTEELY--AETGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 247 VAD-VNAFLCYNANKALMNLGYEALFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAIE 311
>gi|49473850|ref|YP_031892.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
quintana str. Toulouse]
gi|49239353|emb|CAF25686.1| Ribonucleotide reductase beta-chain [Bartonella quintana str.
Toulouse]
Length = 324
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 47/130 (36%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + S +L + +E Y + +GL
Sbjct: 194 IRDEAVHGYYIGYKFQLGFAKLNESKKQEIKDFSFNLLFDLYNIECKYTEDLY--DALGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G EPLF NP + + +FF + Y
Sbjct: 252 T-EDVKVFLHYNANKALMNLGFEPLFPPEVCRVNPAILAALSPSSDENHDFFSGAGSSYV 310
Query: 118 --QGAELKWD 125
+ D
Sbjct: 311 IGKAVATTDD 320
>gi|323978713|gb|EGB73795.1| ribonucleotide reductase [Escherichia coli TW10509]
Length = 319
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISMAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|312864696|ref|ZP_07724927.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
downei F0415]
gi|311099823|gb|EFQ58036.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
downei F0415]
Length = 319
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 47/130 (36%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E EF+ +L++ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSEEEQSEFRDWMYDLLYQLYENEELYTKTLY--DEVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTADDVNPIV-MNGISTGTSNHDFFSQVGNGYL 303
Query: 118 QGA--ELKWD 125
G ++ D
Sbjct: 304 LGTVEAMQDD 313
>gi|82793227|ref|XP_727957.1| ribonucleotide reductase [Plasmodium yoelii yoelii str. 17XNL]
gi|23484058|gb|EAA19522.1| ribonucleotide reductase, putative [Plasmodium yoelii yoelii]
Length = 373
Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE L +F + N HL K + A LE + + + F+ +
Sbjct: 215 RDEYLQGDFSVMCCN-------HLNNKLRYENVLNYFKAAVELEYNFCVDMLDFDFLKIT 267
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 95
+Q++Q++A+ + + ++ PF W
Sbjct: 268 KDQVKQFLQYLADTMLLNLKYPKHYN-SKYPFAW 300
>gi|322374376|ref|ZP_08048890.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
sp. C300]
gi|321279876|gb|EFX56915.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
sp. C300]
Length = 320
Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQGKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|328543067|ref|YP_004303176.1| Ribonucleoside-diphosphate reductase, beta subunit [Polymorphum
gilvum SL003B-26A1]
gi|326412813|gb|ADZ69876.1| Ribonucleoside-diphosphate reductase, beta subunit [Polymorphum
gilvum SL003B-26A1]
Length = 325
Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 51/134 (38%), Gaps = 13/134 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +++ + +E Y VGL
Sbjct: 195 IRDEAVHGYYIGYKFQRGLETVSEAERQEIKDFAFSLMFDLYAIEAKYTESL--CDGVGL 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVI-DLKKEKNFFETRVTEY 116
+ ++ + AN+ +G E LF NP M+ + + + +FF + Y
Sbjct: 253 T-EDVKHFLHYNANKALMNLGYEALFPDAVCAVNPAI-MAALSPNADENHDFFSGSGSSY 310
Query: 117 QQGAEL-----KWD 125
G + WD
Sbjct: 311 VIGKAVATEDEDWD 324
>gi|254489413|ref|ZP_05102616.1| ribonucleoside-diphosphate reductase, beta subunit [Roseobacter sp.
GAI101]
gi|214041920|gb|EEB82560.1| ribonucleoside-diphosphate reductase, beta subunit [Roseobacter sp.
GAI101]
Length = 324
Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 50/133 (37%), Gaps = 12/133 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + P + + +++ + +E Y E +GL
Sbjct: 195 IRDEAIHGYYIGYKFQRATEQLPQADRDALKDFAFSLMFDLYEIEAHYTAELYDD--LGL 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + D + +FF + Y
Sbjct: 253 T-EDVKAFLHYNANKALQNLGYEALFPAQVCEVNPAILAALSPDSENH-DFFSGSGSSYV 310
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 311 IGKAVATEDEDWD 323
>gi|195977892|ref|YP_002123136.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
equi subsp. zooepidemicus MGCS10565]
gi|195974597|gb|ACG62123.1| ribonucleotide reductase of class Ib (aerobic) beta subunit NrdF
[Streptococcus equi subsp. zooepidemicus MGCS10565]
Length = 319
Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E + + +L++ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSDSEQESLRDWMYDLLYQLYENEEQYTKTLY--DEVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
++++ AN+ +G +PLF T NP M+ + +FF
Sbjct: 246 TEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295
>gi|293412034|ref|ZP_06654757.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
gi|291468805|gb|EFF11296.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
Length = 319
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|311278369|ref|YP_003940600.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
gi|308747564|gb|ADO47316.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
Length = 320
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + P + + ++ +L E+AY G
Sbjct: 190 IRDEAVHGYYIGYKYQKGLEKIPPARREALRNEAVDLLMNLYENELAYTEALY--AQTGW 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 248 T-EEVKRFLCYNANKALMNLGYEALFPAEMADVNPAILAALSPNADENHDFFSGSGSSYV 306
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 307 MGKTVGTHDEDWD 319
>gi|311741200|ref|ZP_07715024.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
pseudogenitalium ATCC 33035]
gi|311303370|gb|EFQ79449.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 329
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q + E ++ + ++++ EI Y + +G
Sbjct: 199 IRDEAVHGYYIGYKFQQAYKQLDEEHQAELKEYTFDLVYDLYDNEIDYTEDLYDD--LGW 256
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++++ AN+ + +G E LF E +S I + + +FF +
Sbjct: 257 T-EDVKRFLRYNANKALNNLGFEGLFPADETR---VSPAILSSLSPNADENHDFFSGSGS 312
Query: 115 EYQ--QGAELKWD 125
Y + + D
Sbjct: 313 SYVIGKAEDTTDD 325
>gi|187734239|ref|YP_001881572.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
CDC 3083-94]
gi|187431231|gb|ACD10505.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella boydii
CDC 3083-94]
Length = 319
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL---YAETS 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 246 WADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|319944853|ref|ZP_08019115.1| ribonucleotide-diphosphate reductase subunit beta [Lautropia
mirabilis ATCC 51599]
gi|319741423|gb|EFV93848.1| ribonucleotide-diphosphate reductase subunit beta [Lautropia
mirabilis ATCC 51599]
Length = 333
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 12/133 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + P + + ++L E +E Y E + +
Sbjct: 204 IRDEAVHGYYIGYKFQRALARLPEADQARLKDFAFSLLFELYEVEALYTEELYDRIGL-- 261
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP +S + + +FF + Y
Sbjct: 262 -TEDVKAFLHYNANKALQNLGYEALFPPAACEVNPAI-LSALSPDSENHDFFSGSGSSYV 319
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 320 IGKAVATEDEDWD 332
>gi|306812443|ref|ZP_07446641.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
NC101]
gi|222034376|emb|CAP77117.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
coli LF82]
gi|305854481|gb|EFM54919.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
NC101]
gi|312947211|gb|ADR28038.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O83:H1 str. NRG 857C]
Length = 319
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|323966928|gb|EGB62356.1| ribonucleotide reductase [Escherichia coli M863]
gi|327251394|gb|EGE63080.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
coli STEC_7v]
Length = 319
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISMAQREELKSFAFDLLLELYDNELQYTDELYAETTW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|307625752|gb|ADN70056.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
UM146]
Length = 319
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 50/126 (39%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNQEKISQAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -SDDVKAFLCYNANKVLMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|300859086|ref|YP_003784069.1| ribonucleoside-diphosphate reductase subunit beta [Corynebacterium
pseudotuberculosis FRC41]
gi|300686540|gb|ADK29462.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
pseudotuberculosis FRC41]
gi|302206792|gb|ADL11134.1| Ribonucleoside-diphosphate reductase beta chain [Corynebacterium
pseudotuberculosis C231]
gi|302331346|gb|ADL21540.1| Ribonucleoside-diphosphate reductase beta chain [Corynebacterium
pseudotuberculosis 1002]
gi|308277038|gb|ADO26937.1| Ribonucleotide reductase, beta subunit [Corynebacterium
pseudotuberculosis I19]
Length = 328
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q E +E ++ + +L++ EI Y + +G
Sbjct: 198 IRDEAVHGYYIGYKYQQAVREQTPERQEELKEYTFDLLYDLYDNEIQYTEDLYDD--LGW 255
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++++ AN+ + +G E LF E +S I + + +FF +
Sbjct: 256 T-EDVKRFLRYNANKALNNLGYEGLFPADECK---VSPAILSALSPNADENHDFFSGSGS 311
Query: 115 EYQ--QGAELKWD 125
Y + D
Sbjct: 312 SYVIGKAENTTDD 324
>gi|184201049|ref|YP_001855256.1| ribonucleoside-diphosphate reductase beta subunit [Kocuria
rhizophila DC2201]
gi|183581279|dbj|BAG29750.1| ribonucleoside-diphosphate reductase beta subunit [Kocuria
rhizophila DC2201]
Length = 326
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 54/139 (38%), Gaps = 23/139 (16%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + ++ +E + + +L E E+AYA VG
Sbjct: 196 IRDEAVHGYYIGYKYQKGLLQESPQRQQELKDYTYDLLDELYENEVAYAEALY--DSVGW 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---------DLKKEKNFFET 111
++++ + AN+ + +G E LF M++V + + +FF
Sbjct: 254 T-EDVKKFLHYNANKALNNLGYEALFPRE------MTDVSPAILSSLSPNADENHDFFSG 306
Query: 112 RVTEYQQGAELK-----WD 125
+ Y G + WD
Sbjct: 307 SGSSYVIGKAVNTEDEDWD 325
>gi|325496274|gb|EGC94133.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia
fergusonii ECD227]
Length = 319
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNLGKTSLEQREELKNFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|183598095|ref|ZP_02959588.1| hypothetical protein PROSTU_01459 [Providencia stuartii ATCC 25827]
gi|188020253|gb|EDU58293.1| hypothetical protein PROSTU_01459 [Providencia stuartii ATCC 25827]
Length = 323
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 51/133 (38%), Gaps = 14/133 (10%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + ++ KE + + ++L + E+ Y E VG
Sbjct: 193 IRDEAIHGYYIGYKFQKSLLKYDEKTQKEIKDFTFSLLFDLYENEVNYTQELY--DTVGW 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++ + AN+ +G E LF +S I D + +FF +
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPDVVTD---VSPAILSALSPDANENHDFFSGSGS 306
Query: 115 EYQ--QGAELKWD 125
Y + + D
Sbjct: 307 SYVIGKAVSTEDD 319
>gi|255324325|ref|ZP_05365446.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
tuberculostearicum SK141]
gi|255298655|gb|EET77951.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
tuberculostearicum SK141]
Length = 329
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q + E ++ + +L++ EI Y + +G
Sbjct: 199 IRDEAVHGYYIGYKFQQAYKQLDEEHQAELKEYTFDLLYDLYDNEIDYTEDLYDD--LGW 256
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++++ AN+ + +G E LF E +S I + + +FF +
Sbjct: 257 T-EDVKRFLRYNANKALNNLGFEGLFPADETR---VSPAILSSLSPNADENHDFFSGSGS 312
Query: 115 EYQ--QGAELKWD 125
Y + + D
Sbjct: 313 SYVIGKAEDTTDD 325
>gi|323941488|gb|EGB37671.1| ribonucleotide reductase [Escherichia coli E482]
Length = 319
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|32453719|ref|NP_861928.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
RB69]
gi|32350538|gb|AAP76137.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
RB69]
Length = 390
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 8/123 (6%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL----EIAYAHETMPKGF 57
RDE LHL + + + + + +A G
Sbjct: 247 RDEQLHLRVLSTLSVNFNLVLMAMSGFKLLKNVNKKQLTFLWKLIVKYKEWAAHLFKDGT 306
Query: 58 -VGLNAPSCEQYMQFIANRRCHQIGLE-PLFK-YTENPFPWMSEVIDLKKEKNF-FETRV 113
G+N S ++ ++ R Q GL P+ T++P+PW+ E ++ + E +
Sbjct: 307 CPGINTQSMCAFVDYLTVSRMKQCGLPCPITDAPTKHPYPWIREYLNSDLVQAAPQEVEI 366
Query: 114 TEY 116
+ Y
Sbjct: 367 SSY 369
>gi|15803196|ref|NP_289228.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H7 EDL933]
gi|15832793|ref|NP_311566.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H7 str. Sakai]
gi|168750919|ref|ZP_02775941.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4113]
gi|168755421|ref|ZP_02780428.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4401]
gi|168762471|ref|ZP_02787478.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4501]
gi|168768767|ref|ZP_02793774.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4486]
gi|168774792|ref|ZP_02799799.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4196]
gi|168778658|ref|ZP_02803665.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4076]
gi|168787931|ref|ZP_02812938.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC869]
gi|168800561|ref|ZP_02825568.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC508]
gi|195938430|ref|ZP_03083812.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H7 str. EC4024]
gi|208808703|ref|ZP_03251040.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4206]
gi|208813382|ref|ZP_03254711.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4045]
gi|208819985|ref|ZP_03260305.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4042]
gi|209400851|ref|YP_002272142.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4115]
gi|217327155|ref|ZP_03443238.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. TW14588]
gi|254794623|ref|YP_003079460.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H7 str. TW14359]
gi|261225973|ref|ZP_05940254.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
protein [Escherichia coli O157:H7 str. FRIK2000]
gi|261256769|ref|ZP_05949302.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
protein [Escherichia coli O157:H7 str. FRIK966]
gi|12517115|gb|AAG57786.1|AE005496_9 ribonucleoside-diphosphate reductase 2, beta chain [Escherichia
coli O157:H7 str. EDL933]
gi|13363010|dbj|BAB36962.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
O157:H7 str. Sakai]
gi|187769524|gb|EDU33368.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4196]
gi|188015002|gb|EDU53124.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4113]
gi|189003218|gb|EDU72204.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4076]
gi|189357305|gb|EDU75724.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4401]
gi|189362069|gb|EDU80488.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4486]
gi|189367242|gb|EDU85658.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4501]
gi|189372097|gb|EDU90513.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC869]
gi|189377142|gb|EDU95558.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC508]
gi|208728504|gb|EDZ78105.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4206]
gi|208734659|gb|EDZ83346.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4045]
gi|208740108|gb|EDZ87790.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4042]
gi|209162251|gb|ACI39684.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. EC4115]
gi|209762240|gb|ACI79432.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia
coli]
gi|209762242|gb|ACI79433.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia
coli]
gi|209762246|gb|ACI79435.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia
coli]
gi|217319522|gb|EEC27947.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli O157:H7 str. TW14588]
gi|254594023|gb|ACT73384.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
protein [Escherichia coli O157:H7 str. TW14359]
gi|320189007|gb|EFW63666.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H7 str. EC1212]
gi|320640665|gb|EFX10201.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H7 str. G5101]
gi|326338609|gb|EGD62435.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H7 str. 1044]
gi|326342863|gb|EGD66631.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H7 str. 1125]
Length = 319
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|16130590|ref|NP_417162.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
protein [Escherichia coli str. K-12 substr. MG1655]
gi|74313247|ref|YP_311666.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sonnei
Ss046]
gi|89109469|ref|AP_003249.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
[Escherichia coli str. K-12 substr. W3110]
gi|157162127|ref|YP_001459445.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
HS]
gi|170019072|ref|YP_001724026.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
ATCC 8739]
gi|170082262|ref|YP_001731582.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
protein [Escherichia coli str. K-12 substr. DH10B]
gi|188492563|ref|ZP_02999833.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli 53638]
gi|193065983|ref|ZP_03047042.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli E22]
gi|193070996|ref|ZP_03051924.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli E110019]
gi|194427830|ref|ZP_03060376.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli B171]
gi|194439440|ref|ZP_03071516.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli 101-1]
gi|209920120|ref|YP_002294204.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
SE11]
gi|218696273|ref|YP_002403940.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
55989]
gi|238901820|ref|YP_002927616.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
protein [Escherichia coli BW2952]
gi|256019542|ref|ZP_05433407.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
gi|256024812|ref|ZP_05438677.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
4_1_40B]
gi|260845324|ref|YP_003223102.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
coli O103:H2 str. 12009]
gi|293448994|ref|ZP_06663415.1| ribonucleoside-diphosphate reductase [Escherichia coli B088]
gi|300906827|ref|ZP_07124508.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 84-1]
gi|300916824|ref|ZP_07133528.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 115-1]
gi|300922750|ref|ZP_07138839.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 182-1]
gi|300930529|ref|ZP_07145925.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 187-1]
gi|300949072|ref|ZP_07163119.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 116-1]
gi|300957447|ref|ZP_07169660.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 175-1]
gi|301026690|ref|ZP_07190101.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 196-1]
gi|301306007|ref|ZP_07212087.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 124-1]
gi|301327384|ref|ZP_07220633.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 78-1]
gi|301645345|ref|ZP_07245292.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 146-1]
gi|307139368|ref|ZP_07498724.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
H736]
gi|307314435|ref|ZP_07594040.1| Ribonucleoside-diphosphate reductase [Escherichia coli W]
gi|312973113|ref|ZP_07787286.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
coli 1827-70]
gi|331643364|ref|ZP_08344495.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli H736]
gi|331669414|ref|ZP_08370260.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli TA271]
gi|331678654|ref|ZP_08379328.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli H591]
gi|2507306|sp|P37146|RIR4_ECOLI RecName: Full=Ribonucleoside-diphosphate reductase 2 subunit beta;
AltName: Full=R2F protein; AltName: Full=Ribonucleotide
reductase 2
gi|303325061|pdb|3N37|A Chain A, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
Escherichia Coli
gi|303325062|pdb|3N38|A Chain A, Ribonucleotide Reductase Nrdf From Escherichia Coli Soaked
With Ferrous Ions
gi|303325063|pdb|3N39|B Chain B, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
Escherichia Coli In Complex With Nrdi
gi|303325065|pdb|3N39|A Chain A, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
Escherichia Coli In Complex With Nrdi
gi|303325067|pdb|3N3A|B Chain B, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
Escherichia Coli In Complex With Reduced Nrdi
gi|303325069|pdb|3N3A|A Chain A, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
Escherichia Coli In Complex With Reduced Nrdi
gi|303325071|pdb|3N3B|B Chain B, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
Escherichia Coli In Complex With Reduced Nrdi With A
Trapped Peroxide
gi|303325073|pdb|3N3B|A Chain A, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
Escherichia Coli In Complex With Reduced Nrdi With A
Trapped Peroxide
gi|1789031|gb|AAC75723.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
protein [Escherichia coli str. K-12 substr. MG1655]
gi|1800064|dbj|BAA16541.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
[Escherichia coli str. K12 substr. W3110]
gi|73856724|gb|AAZ89431.1| ribonucleoside-diphosphate reductase 2, beta chain, frag [Shigella
sonnei Ss046]
gi|157067807|gb|ABV07062.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli HS]
gi|169754000|gb|ACA76699.1| Ribonucleoside-diphosphate reductase [Escherichia coli ATCC 8739]
gi|169890097|gb|ACB03804.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
protein [Escherichia coli str. K-12 substr. DH10B]
gi|188487762|gb|EDU62865.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli 53638]
gi|192926397|gb|EDV81032.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli E22]
gi|192955654|gb|EDV86129.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli E110019]
gi|194414063|gb|EDX30339.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli B171]
gi|194421616|gb|EDX37627.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli 101-1]
gi|209762244|gb|ACI79434.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia
coli]
gi|209913379|dbj|BAG78453.1| ribonucleoside-diphosphate reductase beta subunit [Escherichia coli
SE11]
gi|218353005|emb|CAU98821.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
[Escherichia coli 55989]
gi|238863480|gb|ACR65478.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
protein [Escherichia coli BW2952]
gi|257760471|dbj|BAI31968.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
coli O103:H2 str. 12009]
gi|291322084|gb|EFE61513.1| ribonucleoside-diphosphate reductase [Escherichia coli B088]
gi|299879612|gb|EFI87823.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 196-1]
gi|300315803|gb|EFJ65587.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 175-1]
gi|300401428|gb|EFJ84966.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 84-1]
gi|300415890|gb|EFJ99200.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 115-1]
gi|300420935|gb|EFK04246.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 182-1]
gi|300451458|gb|EFK15078.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 116-1]
gi|300461585|gb|EFK25078.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 187-1]
gi|300838718|gb|EFK66478.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 124-1]
gi|300846038|gb|EFK73798.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 78-1]
gi|301076379|gb|EFK91185.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 146-1]
gi|306906003|gb|EFN36524.1| Ribonucleoside-diphosphate reductase [Escherichia coli W]
gi|309703041|emb|CBJ02373.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
ETEC H10407]
gi|310333055|gb|EFQ00269.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
coli 1827-70]
gi|315061957|gb|ADT76284.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
[Escherichia coli W]
gi|315254452|gb|EFU34420.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 85-1]
gi|315615063|gb|EFU95700.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
coli 3431]
gi|320198428|gb|EFW73030.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
EC4100B]
gi|320656721|gb|EFX24609.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320662264|gb|EFX29661.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O55:H7 str. USDA 5905]
gi|320667315|gb|EFX34273.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H7 str. LSU-61]
gi|323173041|gb|EFZ58672.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
coli LT-68]
gi|323183202|gb|EFZ68599.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
coli 1357]
gi|323377462|gb|ADX49730.1| Ribonucleoside-diphosphate reductase [Escherichia coli KO11]
gi|323935630|gb|EGB31947.1| ribonucleotide reductase [Escherichia coli E1520]
gi|323946352|gb|EGB42381.1| ribonucleotide reductase [Escherichia coli H120]
gi|323960578|gb|EGB56205.1| ribonucleotide reductase [Escherichia coli H489]
gi|323971479|gb|EGB66714.1| ribonucleotide reductase [Escherichia coli TA007]
gi|324020305|gb|EGB89524.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 117-3]
gi|324120035|gb|EGC13912.1| ribonucleotide reductase [Escherichia coli E1167]
gi|331036835|gb|EGI09059.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli H736]
gi|331063082|gb|EGI34995.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli TA271]
gi|331073484|gb|EGI44805.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli H591]
gi|332103018|gb|EGJ06364.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
Length = 319
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|323159821|gb|EFZ45793.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
coli E128010]
Length = 319
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|320173468|gb|EFW48667.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
dysenteriae CDC 74-1112]
Length = 319
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKNFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|191167101|ref|ZP_03028922.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli B7A]
gi|260856787|ref|YP_003230678.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
coli O26:H11 str. 11368]
gi|309795135|ref|ZP_07689554.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 145-7]
gi|331664233|ref|ZP_08365139.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli TA143]
gi|190902883|gb|EDV62611.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli B7A]
gi|257755436|dbj|BAI26938.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
coli O26:H11 str. 11368]
gi|308121106|gb|EFO58368.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 145-7]
gi|323154887|gb|EFZ41079.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
coli EPECa14]
gi|331058164|gb|EGI30145.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli TA143]
Length = 319
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|297570727|ref|YP_003696501.1| ribonucleoside-diphosphate reductase [Arcanobacterium haemolyticum
DSM 20595]
gi|296931074|gb|ADH91882.1| Ribonucleoside-diphosphate reductase [Arcanobacterium haemolyticum
DSM 20595]
Length = 324
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q E + ++L + E Y + +
Sbjct: 194 IRDEAVHGYYIGYKYQQAVKRASAERQAELMDYTYSLLEDLYENEEGYTESLYDEMGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++++ AN+ +G E LF + NP + + + +FF + Y
Sbjct: 252 -TEDVKMFLRYNANKALMNLGYEALFPADQTAVNPAILAALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAE-----LKWD 125
G WD
Sbjct: 311 IGTAEATEDEDWD 323
>gi|307132178|ref|YP_003884194.1| ribonucleoside-diphosphate reductase 2, subunit beta, ferritin-like
protein [Dickeya dadantii 3937]
gi|306529707|gb|ADM99637.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
protein [Dickeya dadantii 3937]
Length = 330
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q ++ Q + +L E+ Y HE
Sbjct: 200 IRDEAVHGYYIGYKYQQGLKRVGTQQQRDLQAFAYDLLQTLYDNEVDYTHELYDDVGW-- 257
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ +++ + AN+ +G E LF NP + ++ +FF + Y
Sbjct: 258 -SDDVVKFLHYNANKALMNLGYEALFPAGMTDVNPAILAALSPGAEENHDFFSGAGSSYV 316
Query: 118 QGAELK-----WD 125
G ++ WD
Sbjct: 317 IGKAVETEDEDWD 329
>gi|331658787|ref|ZP_08359729.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli TA206]
gi|315298701|gb|EFU57955.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 16-3]
gi|331053369|gb|EGI25398.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli TA206]
Length = 319
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISLAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|253990649|ref|YP_003042005.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253782099|emb|CAQ85263.1| ribonucleoside-diphosphate reductase 2 beta chain [Photorhabdus
asymbiotica]
Length = 319
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 53/139 (38%), Gaps = 23/139 (16%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q + P+ KE + + ++L + EI Y + VG
Sbjct: 189 IRDEAIHGYYIGYKFQQSLNKYPNSEKKEIKDFTFSLLFDLYENEIKYTEDLY--DIVGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---------DLKKEKNFFET 111
++++ + AN+ +G E LF M++V + +FF
Sbjct: 247 T-EDVKKFLHYNANKALMNLGYEALF------LSEMTDVSPAILSALSPGANENHDFFSG 299
Query: 112 RVTEYQQGAELK-----WD 125
+ Y G + WD
Sbjct: 300 SGSSYVIGKAVNTEDEDWD 318
>gi|254037718|ref|ZP_04871776.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
1_1_43]
gi|226839342|gb|EEH71363.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
1_1_43]
Length = 319
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|270291189|ref|ZP_06197412.1| ribonucleoside-diphosphate reductase, beta subunit [Pediococcus
acidilactici 7_4]
gi|304385474|ref|ZP_07367819.1| ribonucleotide-diphosphate reductase subunit beta [Pediococcus
acidilactici DSM 20284]
gi|270280585|gb|EFA26420.1| ribonucleoside-diphosphate reductase, beta subunit [Pediococcus
acidilactici 7_4]
gi|304328681|gb|EFL95902.1| ribonucleotide-diphosphate reductase subunit beta [Pediococcus
acidilactici DSM 20284]
Length = 317
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + +E + L++ E Y H+ VG
Sbjct: 188 LRDESVHGTYIGYKFQLGMKDLGENEQQELKDWMYNFLYDLYANEEKYVHKVY--DQVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++ AN+ +G +PLF TE NP M+ + +FF
Sbjct: 246 TEEVL-TFTRYNANKALMNLGQDPLFPDTEADVNPIV-MNGISTGTSNHDFF 295
>gi|324111310|gb|EGC05292.1| ribonucleotide reductase [Escherichia fergusonii B253]
Length = 319
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISLAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|194468106|ref|ZP_03074092.1| Ribonucleoside-diphosphate reductase [Lactobacillus reuteri 100-23]
gi|194452959|gb|EDX41857.1| Ribonucleoside-diphosphate reductase [Lactobacillus reuteri 100-23]
Length = 339
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 7/124 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + ++ + L+E E Y H VG
Sbjct: 197 LRDESVHGTYIGYKFQVGLRDRTEKQQQDMKDWMYNFLYELYDNEEKYTHLLY--DQVGW 254
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y+
Sbjct: 255 TDDVL-TFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTSTSNHDFFSQVGNGYR 312
Query: 118 QGAE 121
GA
Sbjct: 313 MGAV 316
>gi|24113980|ref|NP_708490.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
flexneri 2a str. 301]
gi|30064043|ref|NP_838214.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
flexneri 2a str. 2457T]
gi|110806691|ref|YP_690211.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
flexneri 5 str. 8401]
gi|24053093|gb|AAN44197.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella
flexneri 2a str. 301]
gi|30042299|gb|AAP18024.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella
flexneri 2a str. 2457T]
gi|110616239|gb|ABF04906.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella
flexneri 5 str. 8401]
gi|281602052|gb|ADA75036.1| Ribonucleoside-diphosphate reductase 2, beta chain [Shigella
flexneri 2002017]
gi|313648326|gb|EFS12770.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
flexneri 2a str. 2457T]
Length = 319
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + N+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNTNKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|218701171|ref|YP_002408800.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
IAI39]
gi|218371157|emb|CAR18988.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
[Escherichia coli IAI39]
Length = 319
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISLAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|237729635|ref|ZP_04560116.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
30_2]
gi|226908241|gb|EEH94159.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
30_2]
Length = 319
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 46/130 (35%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E Y E G
Sbjct: 189 IRDEAVHGYYIGYKYQKGLEHISESAREELKNFAFDLLMELYDNEARYTEELY--AETGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 247 V-DDVKAFLCYNANKALMNLGYEALFPPEMAEVNPTILAALSPNADENHDFFSGSGSSYV 305
Query: 118 --QGAELKWD 125
+ E + D
Sbjct: 306 MGKAVETEDD 315
>gi|68068657|ref|XP_676239.1| ribonucleotide reductase small subunit [Plasmodium berghei strain
ANKA]
gi|56495842|emb|CAH97095.1| ribonucleotide reductase small subunit, putative [Plasmodium
berghei]
Length = 299
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 10/108 (9%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE L +F + N HL K + A LE + + + F+ +
Sbjct: 179 RDEYLQGDFSVMCCN-------HLNNKLKYESVLYYFKSAVELEYNFCVDMLDFNFLKIT 231
Query: 62 APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW--MSEVIDLKKEKN 107
+Q++Q++A+ + F ++ PF W S+++ + KN
Sbjct: 232 KEQVKQFLQYLADTMLLNLKYPKHFN-SKYPFTWKEFSKIVVSENAKN 278
>gi|227545165|ref|ZP_03975214.1| ribonucleoside-diphosphate reductase [Lactobacillus reuteri
CF48-3A]
gi|300909160|ref|ZP_07126621.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
reuteri SD2112]
gi|227184848|gb|EEI64919.1| ribonucleoside-diphosphate reductase [Lactobacillus reuteri
CF48-3A]
gi|300893025|gb|EFK86384.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
reuteri SD2112]
Length = 339
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 7/124 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + ++ + L+E E Y H VG
Sbjct: 197 LRDESVHGTYIGYKFQVGLRDRTEKQQQDMKDWMYNFLYELYDNEEKYTHLLY--DQVGW 254
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y+
Sbjct: 255 TDDVL-TFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTSTSNHDFFSQVGNGYR 312
Query: 118 QGAE 121
GA
Sbjct: 313 MGAV 316
>gi|148543559|ref|YP_001270929.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
reuteri DSM 20016]
gi|184152966|ref|YP_001841307.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
reuteri JCM 1112]
gi|227363481|ref|ZP_03847603.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
reuteri MM2-3]
gi|325681909|ref|ZP_08161427.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
reuteri MM4-1A]
gi|148530593|gb|ABQ82592.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Lactobacillus reuteri DSM 20016]
gi|183224310|dbj|BAG24827.1| ribonucleotide diphosphate reductase beta subunit [Lactobacillus
reuteri JCM 1112]
gi|227071495|gb|EEI09796.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
reuteri MM2-3]
gi|324978553|gb|EGC15502.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
reuteri MM4-1A]
Length = 339
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 7/124 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + ++ + L+E E Y H VG
Sbjct: 197 LRDESVHGTYIGYKFQVGLRDRTEKQQQDMKDWMYNFLYELYDNEEKYTHLLY--DQVGW 254
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y+
Sbjct: 255 TDDVL-TFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTSTSNHDFFSQVGNGYR 312
Query: 118 QGAE 121
GA
Sbjct: 313 MGAV 316
>gi|281491477|ref|YP_003353457.1| ribonucleoside-diphosphate reductase subunit beta [Lactococcus
lactis subsp. lactis KF147]
gi|281375195|gb|ADA64708.1| Ribonucleoside-diphosphate reductase, beta chain [Lactococcus
lactis subsp. lactis KF147]
Length = 325
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 45/119 (37%), Gaps = 7/119 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E EF+ +L++ E Y+H VG
Sbjct: 196 IRDESVHGTYIGYKFQLGFNELSEDEQGEFRDWMYELLYQLYENEEKYSHLLY--DKVGW 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEY 116
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 254 TDEVL-TFLRYNANKALMNLGQDPLFPDTAADVNPVV-MNGISTSSSNHDFFSQVGNSY 310
>gi|254471227|ref|ZP_05084629.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudovibrio
sp. JE062]
gi|211959373|gb|EEA94571.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudovibrio
sp. JE062]
Length = 325
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 13/134 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + E + + T+L + LE Y + +GL
Sbjct: 195 IRDEAVHGYYIGYKFQRGLERLSEAERTEIKDFAFTLLFDLYDLETKYTEDLY--DPLGL 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVI-DLKKEKNFFETRVTEY 116
+ ++ + N+ +G E LF NP M+ + + + +FF + Y
Sbjct: 253 T-EDVKHFLHYNGNKALQNLGFEGLFPETICQVNPAI-MASLSPNADENHDFFSGSGSSY 310
Query: 117 QQGAEL-----KWD 125
G + WD
Sbjct: 311 VIGKAVATEDEDWD 324
>gi|315641368|ref|ZP_07896443.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
italicus DSM 15952]
gi|315482861|gb|EFU73382.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
italicus DSM 15952]
Length = 321
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 7/124 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + P E + +L E E Y E +
Sbjct: 189 IRDESVHGTYIGYKFQLGFQALPEAEQAELKDWMYGLLFELYENEENYTDELYGEIGW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++++ AN+ +G +PLF + NP M+ + +FF Y
Sbjct: 247 -AEEVKTFLRYNANKALMNMGQDPLFPDSANDVNPIV-MNGISTGTSNHDFFSQVGNGYL 304
Query: 118 QGAE 121
G+
Sbjct: 305 LGSV 308
>gi|253772463|ref|YP_003035294.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162613|ref|YP_003045721.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
B str. REL606]
gi|297519661|ref|ZP_06938047.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
OP50]
gi|242378238|emb|CAQ33013.1| nrdF, subunit of ribonucleoside-diphosphate reductase 2, beta
subunit dimer and ribonucleoside-diphosphate reductase 2
[Escherichia coli BL21(DE3)]
gi|253323507|gb|ACT28109.1| Ribonucleoside-diphosphate reductase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974514|gb|ACT40185.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
B str. REL606]
gi|253978681|gb|ACT44351.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
BL21(DE3)]
Length = 319
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G +PLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYKPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|148994532|ref|ZP_01823712.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae SP9-BS68]
gi|147927202|gb|EDK78238.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae SP9-BS68]
Length = 319
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295
>gi|315223183|ref|ZP_07865044.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
anginosus F0211]
gi|315187615|gb|EFU21369.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
anginosus F0211]
Length = 319
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + F++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQETFREWMYDLLYTLYENEEGYTETLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G + LF T NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDSLFPDTADDVNPIV-MNGISTGTSNHDFF 295
>gi|319441868|ref|ZP_07991024.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
variabile DSM 44702]
Length = 332
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 48/139 (34%), Gaps = 25/139 (17%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + ++ + E Y + +G
Sbjct: 202 IRDEAVHGYYIGYKYQRALEHETEARRQELKDHTFELVFDLYDNECQYTEDLYDD--LGW 259
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----------NPFPWMSEVIDLKKEKNFF 109
++++++ AN+ + +G E LF E NP + +FF
Sbjct: 260 T-EDVKRFLRYNANKALNNLGYEGLFPVDETRVSPSIISALNP--------GGDENHDFF 310
Query: 110 ETRVTEYQQG---AELKWD 125
+ Y G + D
Sbjct: 311 SGSGSSYVIGKAENTVDDD 329
>gi|15672956|ref|NP_267130.1| ribonucleotide-diphosphate reductase subunit beta [Lactococcus
lactis subsp. lactis Il1403]
gi|12723917|gb|AAK05072.1|AE006332_1 ribonucleoside-diphosphate reductase beta chain [Lactococcus lactis
subsp. lactis Il1403]
gi|326406518|gb|ADZ63589.1| ribonucleoside-diphosphate reductase beta chain [Lactococcus lactis
subsp. lactis CV56]
Length = 325
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 45/119 (37%), Gaps = 7/119 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E EF+ +L++ E Y+H VG
Sbjct: 196 IRDESVHGTYIGYKFQLGFNELSEDEQGEFRDWMYELLYQLYENEEKYSHLLY--DKVGW 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEY 116
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 254 TDEVL-TFLRYNANKALMNLGQDPLFPDTAADVNPVV-MNGISTSSSNHDFFSQVGNSY 310
>gi|312137650|ref|YP_004004986.1| ribonucleoside-diphosphate reductase beta subunit nrdf [Rhodococcus
equi 103S]
gi|311886989|emb|CBH46298.1| ribonucleoside-diphosphate reductase beta subunit NrdF [Rhodococcus
equi 103S]
Length = 322
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 10/124 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + ++ + +L E+AYA + VG
Sbjct: 192 IRDEAVHGYYIGYKCRKALERLDASARDAHRRYTYDLLETLYANEVAYAADLY--DEVGW 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKNFFETRVTE 115
A YM+F AN+ +G EP+F +E NP + + +FF +
Sbjct: 250 TAEVVS-YMRFNANKALANLGYEPMFPVSECQVNPAILSALDP--GAGENHDFFSGSGSA 306
Query: 116 YQQG 119
Y G
Sbjct: 307 YVIG 310
>gi|218547807|ref|YP_002381598.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia
fergusonii ATCC 35469]
gi|218355348|emb|CAQ87955.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
[Escherichia fergusonii ATCC 35469]
Length = 319
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISLAQREELKSFAFDLLLELYDNELQYTDELYAETTW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|168489010|ref|ZP_02713209.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae SP195]
gi|183572389|gb|EDT92917.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae SP195]
gi|332073523|gb|EGI84002.1| ribonucleotide reductase, small chain family protein [Streptococcus
pneumoniae GA17570]
Length = 320
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295
>gi|227529511|ref|ZP_03959560.1| ribonucleoside-diphosphate reductase [Lactobacillus vaginalis ATCC
49540]
gi|227350596|gb|EEJ40887.1| ribonucleoside-diphosphate reductase [Lactobacillus vaginalis ATCC
49540]
Length = 339
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 48/130 (36%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + ++ + L+E E Y H VG
Sbjct: 197 LRDESVHGTYIGYKFQVGMHDRTEKQQQDMKDWMYNFLYELYDNEEKYTHLLY--DQVGW 254
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y+
Sbjct: 255 TEDVL-TFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTSTANHDFFSQVGNGYR 312
Query: 118 QGA--ELKWD 125
GA + D
Sbjct: 313 LGAVEAMNDD 322
>gi|203288309|ref|YP_002223359.1| ribonucleoside-diphosphate reductase, beta subunit [Borrelia
recurrentis A1]
gi|203288575|ref|YP_002223482.1| ribonucleoside-diphosphate reductase beta subunit [Borrelia
duttonii Ly]
gi|201084282|gb|ACH93870.1| ribonucleoside-diphosphate reductase beta subunit [Borrelia
duttonii Ly]
gi|201085529|gb|ACH95102.1| ribonucleoside-diphosphate reductase, beta subunit [Borrelia
recurrentis A1]
Length = 321
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 45/122 (36%), Gaps = 9/122 (7%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + + + + ++ +L + LE Y E +
Sbjct: 192 LRDESVHGVFVGLLAQEEFDKMTMKEQELAYKEMLLILEKLYSLEREYTKELYSCVGLES 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116
+++ A++ +G + F + NP + + + +FF T+ Y
Sbjct: 252 AVDVF---VRYNADKALMNLGFDTKFNIKDTDVNPL--VLNGLRTDTKTHDFFSTKGNGY 306
Query: 117 QQ 118
+
Sbjct: 307 IK 308
>gi|225860977|ref|YP_002742486.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae Taiwan19F-14]
gi|298229749|ref|ZP_06963430.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae str. Canada MDR_19F]
gi|298255394|ref|ZP_06978980.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae str. Canada MDR_19A]
gi|298502819|ref|YP_003724759.1| ribonucleoside-diphosphate reductase [Streptococcus pneumoniae
TCH8431/19A]
gi|225727952|gb|ACO23803.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae Taiwan19F-14]
gi|298238414|gb|ADI69545.1| ribonucleoside-diphosphate reductase [Streptococcus pneumoniae
TCH8431/19A]
gi|327389423|gb|EGE87768.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
[Streptococcus pneumoniae GA04375]
Length = 320
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|149013339|ref|ZP_01834070.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae SP19-BS75]
gi|147762929|gb|EDK69876.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae SP19-BS75]
Length = 320
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|149004132|ref|ZP_01828935.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae SP14-BS69]
gi|237649545|ref|ZP_04523797.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae CCRI 1974]
gi|237822455|ref|ZP_04598300.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae CCRI 1974M2]
gi|147757865|gb|EDK64875.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae SP14-BS69]
Length = 320
Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295
>gi|15903110|ref|NP_358660.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae R6]
gi|116517162|ref|YP_816517.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae D39]
gi|148985789|ref|ZP_01818917.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae SP3-BS71]
gi|148990437|ref|ZP_01821595.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae SP6-BS73]
gi|148999044|ref|ZP_01826476.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae SP11-BS70]
gi|149008157|ref|ZP_01831676.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae SP18-BS74]
gi|149026429|ref|ZP_01836566.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae SP23-BS72]
gi|168483243|ref|ZP_02708195.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae CDC1873-00]
gi|168486506|ref|ZP_02711014.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae CDC1087-00]
gi|168491101|ref|ZP_02715244.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae CDC0288-04]
gi|168493105|ref|ZP_02717248.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae CDC3059-06]
gi|168577270|ref|ZP_02723064.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae MLV-016]
gi|169833110|ref|YP_001694622.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae Hungary19A-6]
gi|182684087|ref|YP_001835834.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
pneumoniae CGSP14]
gi|194397329|ref|YP_002037788.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae G54]
gi|225854653|ref|YP_002736165.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae JJA]
gi|225856856|ref|YP_002738367.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae P1031]
gi|225858968|ref|YP_002740478.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae 70585]
gi|303255568|ref|ZP_07341620.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae BS455]
gi|303260588|ref|ZP_07346554.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
pneumoniae SP-BS293]
gi|303262722|ref|ZP_07348661.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
pneumoniae SP14-BS292]
gi|303265256|ref|ZP_07351167.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
pneumoniae BS397]
gi|303267603|ref|ZP_07353445.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
pneumoniae BS457]
gi|303269940|ref|ZP_07355678.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
pneumoniae BS458]
gi|307067834|ref|YP_003876800.1| ribonucleotide reductase subunit beta [Streptococcus pneumoniae
AP200]
gi|307127225|ref|YP_003879256.1| ribonucleoside-diphosphate reductase subunit beta [Streptococcus
pneumoniae 670-6B]
gi|15458689|gb|AAK99870.1| Nonessential ribonucleoside-diP reductase 2, subunit beta, class I,
function unknown [Streptococcus pneumoniae R6]
gi|116077738|gb|ABJ55458.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae D39]
gi|147755114|gb|EDK62169.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae SP11-BS70]
gi|147760396|gb|EDK67375.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae SP18-BS74]
gi|147922093|gb|EDK73216.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae SP3-BS71]
gi|147924289|gb|EDK75383.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae SP6-BS73]
gi|147929260|gb|EDK80261.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae SP23-BS72]
gi|168995612|gb|ACA36224.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae Hungary19A-6]
gi|172043347|gb|EDT51393.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae CDC1873-00]
gi|182629421|gb|ACB90369.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
pneumoniae CGSP14]
gi|183570430|gb|EDT90958.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae CDC1087-00]
gi|183574343|gb|EDT94871.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae CDC0288-04]
gi|183576617|gb|EDT97145.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae CDC3059-06]
gi|183577169|gb|EDT97697.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae MLV-016]
gi|194356996|gb|ACF55444.1| ribonucleoside-diphosphate reductase beta subunit [Streptococcus
pneumoniae G54]
gi|225720498|gb|ACO16352.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae 70585]
gi|225724090|gb|ACO19943.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae JJA]
gi|225725515|gb|ACO21367.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae P1031]
gi|301794279|emb|CBW36700.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptococcus pneumoniae INV104]
gi|301800116|emb|CBW32717.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptococcus pneumoniae OXC141]
gi|301801954|emb|CBW34682.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptococcus pneumoniae INV200]
gi|302597474|gb|EFL64568.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae BS455]
gi|302636154|gb|EFL66650.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
pneumoniae SP14-BS292]
gi|302638301|gb|EFL68770.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
pneumoniae SP-BS293]
gi|302640522|gb|EFL70931.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
pneumoniae BS458]
gi|302642869|gb|EFL73174.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
pneumoniae BS457]
gi|302645227|gb|EFL75463.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
pneumoniae BS397]
gi|306409371|gb|ADM84798.1| Ribonucleotide reductase, beta subunit [Streptococcus pneumoniae
AP200]
gi|306484287|gb|ADM91156.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
pneumoniae 670-6B]
gi|332074795|gb|EGI85267.1| ribonucleotide reductase, small chain family protein [Streptococcus
pneumoniae GA41301]
gi|332075112|gb|EGI85583.1| ribonucleotide reductase, small chain family protein [Streptococcus
pneumoniae GA17545]
Length = 320
Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295
>gi|85726187|gb|ABC79616.1| ribonucleotide reductase beta subunit [Borrelia hermsii DAH]
Length = 321
Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 46/122 (37%), Gaps = 9/122 (7%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + + + Q+++ +L LE AY + +
Sbjct: 192 LRDESVHGVFVGLLAQEEFNKMTFKEQAFAQREATLILERLYYLESAYTKDLYSSIGLEG 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116
+++ A++ +G + F + NP + + + +FF T+ Y
Sbjct: 252 AVDVF---VRYNADKALMNLGFDSAFNIRDIDVNPL--VLNGLRTNTKTHDFFSTKGNGY 306
Query: 117 QQ 118
+
Sbjct: 307 IK 308
>gi|15901045|ref|NP_345649.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pneumoniae TIGR4]
gi|111657123|ref|ZP_01407908.1| hypothetical protein SpneT_02001649 [Streptococcus pneumoniae
TIGR4]
gi|14972661|gb|AAK75289.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
pneumoniae TIGR4]
Length = 320
Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295
>gi|229552273|ref|ZP_04440998.1| ribonucleoside-diphosphate reductase [Lactobacillus rhamnosus
LMS2-1]
gi|258539683|ref|YP_003174182.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
rhamnosus Lc 705]
gi|229314345|gb|EEN80318.1| ribonucleoside-diphosphate reductase [Lactobacillus rhamnosus
LMS2-1]
gi|257151359|emb|CAR90331.1| Ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
rhamnosus Lc 705]
Length = 326
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ Q +L++ E Y ++ K
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQQQLQDWMYDLLYDLYENEEKYTNDLYAKTKW-- 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G E F T NP M+ + +FF Y+
Sbjct: 246 -TDEVLTFLRYNANKALMNLGQETAFPDTADDVNPIV-MNGISTSTANHDFFSQVGNGYR 303
Query: 118 QGA--ELKWD 125
G ++ D
Sbjct: 304 LGQVEAMEDD 313
>gi|258508470|ref|YP_003171221.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
rhamnosus GG]
gi|257148397|emb|CAR87370.1| Ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
rhamnosus GG]
gi|259649782|dbj|BAI41944.1| ribonucleotide reductase beta subunit [Lactobacillus rhamnosus GG]
Length = 326
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ Q +L++ E Y ++ K
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQQQLQDWMYDLLYDLYENEEKYTNDLYAKTKW-- 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G E F T NP M+ + +FF Y+
Sbjct: 246 -TDEVLTFLRYNANKALMNLGQETAFPDTADDVNPIV-MNGISTSTANHDFFSQVGNGYR 303
Query: 118 QGA--ELKWD 125
G ++ D
Sbjct: 304 LGQVEAMEDD 313
>gi|209551073|ref|YP_002282990.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209536829|gb|ACI56764.1| Ribonucleoside-diphosphate reductase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 324
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E Y +
Sbjct: 194 IRDEAVHGYYIGYKFQRGLERLSEERKQEIKDFAFDLLLELYDNEARYTEALYDGVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 252 -TEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 311 IGKAVATEDEDWD 323
>gi|289178104|gb|ADC85350.1| Ribonucleoside-diphosphate reductase beta chain [Bifidobacterium
animalis subsp. lactis BB-12]
Length = 326
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + E + + +L+E E+ Y H + +
Sbjct: 196 IRDEAVHGYYIGYKYQKGLEMASDAKRAEMETYTYDLLNELYENEVEYTHSLYDEVGL-- 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ E+++ + AN+ +G LF NP + + + +FF + Y
Sbjct: 254 -SDDVEKFLHYNANKALMNLGYPALFPSEICDVNPAILAALSPNADENHDFFSGSGSSYV 312
Query: 118 QGAELKWD 125
G + D
Sbjct: 313 MGRAEETD 320
>gi|221231890|ref|YP_002511042.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptococcus pneumoniae ATCC 700669]
gi|220674350|emb|CAR68896.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptococcus pneumoniae ATCC 700669]
Length = 320
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ ++ +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLY--DGVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295
>gi|57014145|gb|AAT68710.2| ribonucleoside reductase beta subunit [Borrelia hermsii]
Length = 321
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 46/122 (37%), Gaps = 9/122 (7%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H F + + + Q+++ +L LE AY + +
Sbjct: 192 LRDESVHGVFVGLLAQEEFNKMTFKEQAFAQREATLILERLYYLESAYTKDLYSSIGLEG 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NFFETRVTEY 116
+++ A++ +G + F + NP + + + +FF T+ Y
Sbjct: 252 AVDVF---VRYNADKALMNLGFDSAFNIRDIDVNPL--VLNGLRTNTKTHDFFSTKGNGY 306
Query: 117 QQ 118
+
Sbjct: 307 IK 308
>gi|116511803|ref|YP_809019.1| ribonucleotide-diphosphate reductase subunit beta [Lactococcus
lactis subsp. cremoris SK11]
gi|125624347|ref|YP_001032830.1| ribonucleotide-diphosphate reductase subunit beta [Lactococcus
lactis subsp. cremoris MG1363]
gi|116107457|gb|ABJ72597.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Lactococcus lactis subsp. cremoris SK11]
gi|124493155|emb|CAL98119.1| ribonucleoside-diphosphate reductase beta chain [Lactococcus lactis
subsp. cremoris MG1363]
gi|300071131|gb|ADJ60531.1| ribonucleotide-diphosphate reductase subunit beta [Lactococcus
lactis subsp. cremoris NZ9000]
Length = 325
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 45/119 (37%), Gaps = 7/119 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E EF+ +L++ E Y+H VG
Sbjct: 196 IRDESVHGTYIGYKFQLGFNELSEDEQSEFRDWMYELLYKLYENEENYSHLLY--DKVGW 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEY 116
++++ AN+ +G +PLF T NP M+ + +FF Y
Sbjct: 254 TDEVL-TFLRYNANKALMNLGQDPLFPDTAADVNPVV-MNGISTSSSNHDFFSQVGNSY 310
>gi|260448266|gb|ACX38688.1| Ribonucleoside-diphosphate reductase [Escherichia coli DH1]
gi|315137289|dbj|BAJ44448.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
DH1]
Length = 319
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKIFLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|227502986|ref|ZP_03933035.1| ribonucleoside-diphosphate reductase [Corynebacterium accolens ATCC
49725]
gi|306836783|ref|ZP_07469743.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
accolens ATCC 49726]
gi|227076047|gb|EEI14010.1| ribonucleoside-diphosphate reductase [Corynebacterium accolens ATCC
49725]
gi|304567329|gb|EFM42934.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
accolens ATCC 49726]
Length = 329
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 14/133 (10%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q + +E + + + E EI Y + +G
Sbjct: 199 IRDEAVHGYYIGYKFQQEYKKLDEKRQEELKDYTFDLAFELYDNEIDYTEDLY--DELGW 256
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++++ AN+ + +G E LF E +S I + + +FF +
Sbjct: 257 T-EDVKRFLRYNANKALNNLGFEGLFPADETR---VSPAILSSLSPNADENHDFFSGSGS 312
Query: 115 EYQ--QGAELKWD 125
Y + + D
Sbjct: 313 SYVIGKAEDTTDD 325
>gi|183601891|ref|ZP_02963260.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
animalis subsp. lactis HN019]
gi|219682805|ref|YP_002469188.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
animalis subsp. lactis AD011]
gi|241190381|ref|YP_002967775.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|241195787|ref|YP_002969342.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|183218776|gb|EDT89418.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
animalis subsp. lactis HN019]
gi|219620455|gb|ACL28612.1| ribonucleoside-diphosphate reductase 2 beta chain [Bifidobacterium
animalis subsp. lactis AD011]
gi|240248773|gb|ACS45713.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|240250341|gb|ACS47280.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|295793368|gb|ADG32903.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
animalis subsp. lactis V9]
Length = 321
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + E + + +L+E E+ Y H + +
Sbjct: 191 IRDEAVHGYYIGYKYQKGLEMASDAKRAEMETYTYDLLNELYENEVEYTHSLYDEVGL-- 248
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ E+++ + AN+ +G LF NP + + + +FF + Y
Sbjct: 249 -SDDVEKFLHYNANKALMNLGYPALFPSEICDVNPAILAALSPNADENHDFFSGSGSSYV 307
Query: 118 QGAELKWD 125
G + D
Sbjct: 308 MGRAEETD 315
>gi|323188442|gb|EFZ73728.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
coli RN587/1]
Length = 319
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNLEKISLAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|312869696|ref|ZP_07729843.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
oris PB013-T2-3]
gi|311094745|gb|EFQ53042.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
oris PB013-T2-3]
Length = 339
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 48/130 (36%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E ++ + L+E E Y H +G
Sbjct: 197 LRDESVHGTYIGYKFQVGLHERTEKQQQDMKDWLYNFLYELYDNEEKYTHLLY--DKIGW 254
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y+
Sbjct: 255 TDDVL-TFIRYNANKALMNLGQDPLFPDTAADVNPVV-MNGISTSTSNHDFFSQVGNGYR 312
Query: 118 QG--AELKWD 125
G +K D
Sbjct: 313 LGEVEAMKDD 322
>gi|218663032|ref|ZP_03518962.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium etli
IE4771]
Length = 324
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E Y +
Sbjct: 194 IRDEAVHGYYIGYKFQRGLERLSEERRQEIKDFAFDLLLELYDNEARYTEALYDGVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 252 -TEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 311 IGKAVATEDEDWD 323
>gi|308187851|ref|YP_003931982.1| ribonucleoside-diphosphate reductase beta chain [Pantoea vagans
C9-1]
gi|308058361|gb|ADO10533.1| ribonucleoside-diphosphate reductase beta chain [Pantoea vagans
C9-1]
Length = 326
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q L +E QQ + +L E+AY VG
Sbjct: 196 IRDEAVHGYYIGYKYQQALASADDLRREELQQFAYDLLLALYENEVAYTEALYGD--VGW 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 254 V-DEVKTFLHYNANKALMNLGYEALFPAELTAVNPAILSALSPNADENHDFFSGSGSSYV 312
Query: 118 QGAELK 123
G ++
Sbjct: 313 MGKAVE 318
>gi|146318863|ref|YP_001198575.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
suis 05ZYH33]
gi|146321071|ref|YP_001200782.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
suis 98HAH33]
gi|223932819|ref|ZP_03624816.1| Ribonucleoside-diphosphate reductase [Streptococcus suis 89/1591]
gi|253751944|ref|YP_003025085.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptococcus suis SC84]
gi|253753767|ref|YP_003026908.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus suis
P1/7]
gi|253755355|ref|YP_003028495.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus suis
BM407]
gi|330833008|ref|YP_004401833.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
suis ST3]
gi|145689669|gb|ABP90175.1| Ribonucleotide reductase, beta subunit [Streptococcus suis 05ZYH33]
gi|145691877|gb|ABP92382.1| Ribonucleotide reductase, beta subunit [Streptococcus suis 98HAH33]
gi|223898528|gb|EEF64892.1| Ribonucleoside-diphosphate reductase [Streptococcus suis 89/1591]
gi|251816233|emb|CAZ51860.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptococcus suis SC84]
gi|251817819|emb|CAZ55572.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptococcus suis BM407]
gi|251820013|emb|CAR46187.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptococcus suis P1/7]
gi|292558520|gb|ADE31521.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
suis GZ1]
gi|319758306|gb|ADV70248.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
suis JS14]
gi|329307231|gb|AEB81647.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
suis ST3]
Length = 319
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E + + +L++ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELSEEEQDKLRDWMYDLLYQLYENEEGYTRSLY--DAVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 TEEVL-TFLRYNANKALMNLGQDPLFPDSADDVNPII-MNGISTGTSNHDFF 295
>gi|268590425|ref|ZP_06124646.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
rettgeri DSM 1131]
gi|291314339|gb|EFE54792.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
rettgeri DSM 1131]
Length = 323
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 14/133 (10%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + KE + S ++L + E+ Y E VG
Sbjct: 193 IRDEAIHGYYIGYKFQKSLAQYDENTQKEIKDFSFSLLFDLYENEVKYTQELY--DTVGW 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
+ ++++ + AN+ +G E LF T +S I D + +FF +
Sbjct: 251 -SEDVKKFLHYNANKALMNLGYEALFPDTVTD---VSAAILSALSPDANENHDFFSGSGS 306
Query: 115 EYQ--QGAELKWD 125
Y + + D
Sbjct: 307 SYIIGKAVSTEDD 319
>gi|308183791|ref|YP_003927923.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
plantarum subsp. plantarum ST-III]
gi|308047717|gb|ADO00260.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
plantarum subsp. plantarum ST-III]
Length = 242
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 45/125 (36%), Gaps = 8/125 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E K F++ +L + E A+ E
Sbjct: 112 IRDESVHGTYLGYKFQLGYNELSATEQKTFKKWMDELLDDLLENEFAFTEE---VYAPIG 168
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEKNFFETRVTEY 116
A +Q++ + AN+ +GLE F E NP M+ + +FF Y
Sbjct: 169 LAEDVKQFVHYNANKALQNMGLESRFPNAEIKDINPIV-MNGISTETANHDFFSQVGAGY 227
Query: 117 QQGAE 121
G
Sbjct: 228 LMGNA 232
>gi|322391986|ref|ZP_08065450.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
peroris ATCC 700780]
gi|321145212|gb|EFX40609.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
peroris ATCC 700780]
Length = 320
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ + +L+ E Y VG
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPQDEQEKLKDWMYDLLYTLYENEEGYTESLY--DTVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 246 T-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295
>gi|227504013|ref|ZP_03934062.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
6940]
gi|227199407|gb|EEI79455.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
6940]
Length = 329
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + E P +E + + +L+E EI Y + +G
Sbjct: 199 IRDEAVHGYYIGYKFQNGYNELPAEKQEEIKGYTFDLLYELYDNEIDYTEDLY--DELGW 256
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++++ AN+ + +G E LF E +S I + + +FF +
Sbjct: 257 T-EDVKRFLRYNANKALNNLGFEGLFPADETR---VSPAILSSLSPNADENHDFFSGSGS 312
Query: 115 EYQ--QGAELKWD 125
Y + + D
Sbjct: 313 SYVIGKAEDTTDD 325
>gi|184154755|ref|YP_001843095.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
fermentum IFO 3956]
gi|260663216|ref|ZP_05864108.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
fermentum 28-3-CHN]
gi|183226099|dbj|BAG26615.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
fermentum IFO 3956]
gi|260552408|gb|EEX25459.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
fermentum 28-3-CHN]
gi|299782855|gb|ADJ40853.1| Ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
fermentum CECT 5716]
Length = 333
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 7/124 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + ++ ++ L+E E Y H +G
Sbjct: 191 LRDESVHGTYIGYKFQVGMNQLTEKQQQDMKRWMYDFLYELYDNEEKYTHVLY--DQIGW 248
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y+
Sbjct: 249 TDDVLV-FIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTTTSNHDFFSQVGNGYR 306
Query: 118 QGAE 121
GA
Sbjct: 307 LGAV 310
>gi|116253995|ref|YP_769833.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium
leguminosarum bv. viciae 3841]
gi|115258643|emb|CAK09747.1| putative ribonucleoside-diphosphate reductase beta subunit
[Rhizobium leguminosarum bv. viciae 3841]
Length = 324
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E Y +
Sbjct: 194 IRDEAVHGYYIGYKFQRGLERLGDERKQEIKDFAFELLLELYDNEAKYTEALYDGVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 252 -TEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 311 IGKAVATEDEDWD 323
>gi|170684037|ref|YP_001744827.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
SMS-3-5]
gi|170521755|gb|ACB19933.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli SMS-3-5]
Length = 319
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKKLEKISLAQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|227514022|ref|ZP_03944071.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC
14931]
gi|227087608|gb|EEI22920.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC
14931]
Length = 333
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 7/124 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + ++ ++ L+E E Y H +G
Sbjct: 191 LRDESVHGTYIGYKFQVGMNQLTEKQQQDMKRWMYDFLYELYDNEEKYTHVLY--DQIGW 248
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y+
Sbjct: 249 TDDVLV-FIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTTTSNHDFFSQVGNGYR 306
Query: 118 QGAE 121
GA
Sbjct: 307 LGAV 310
>gi|241206478|ref|YP_002977574.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240860368|gb|ACS58035.1| Ribonucleoside-diphosphate reductase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 324
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E Y +
Sbjct: 194 IRDEAVHGYYIGYKFQRGLERLGDERKQEIKDFAFELLLELYDNEAKYTEALYDGVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 252 -TEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 311 IGKAVATEDEDWD 323
>gi|238750475|ref|ZP_04611976.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia rohdei
ATCC 43380]
gi|238711406|gb|EEQ03623.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia rohdei
ATCC 43380]
Length = 323
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + +E + + +L + E+ Y + VG
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDNNRRQEIKNFAFDLLQDLYDNEVRYTEDLY--DKVGW 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF + NP + + + +FF + Y
Sbjct: 251 T-EDVKSFLHYNANKALMNLGYEALFPANQAEVNPAILAALSPNADENHDFFSGSGSSYV 309
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 310 IGKAVITEDEDWD 322
>gi|302023955|ref|ZP_07249166.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
suis 05HAS68]
Length = 320
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E + + +L++ E Y VG
Sbjct: 189 IRDESVHGTYIGYKFQLGFNELSEEEQDKLRDWMYDLLYQLYENEEGYTRSLY--DAVGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
++++ AN+ +G +PLF + NP M+ + +FF
Sbjct: 247 TEEVL-TFLRYNANKALMNLGQDPLFPDSADDVNPII-MNGISTGTSNHDFF 296
>gi|327189837|gb|EGE56975.1| ribonucleoside-diphosphate reductase protein, beta subunit
[Rhizobium etli CNPAF512]
Length = 324
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E Y +
Sbjct: 194 IRDEAVHGYYIGYKFQRGLERLSEERRQEIKDFAFDLLLELYDNEARYTEALYDGVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 252 -TEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 311 IGKAVATEDEDWD 323
>gi|296140644|ref|YP_003647887.1| ribonucleoside-diphosphate reductase [Tsukamurella paurometabola
DSM 20162]
gi|296028778|gb|ADG79548.1| Ribonucleoside-diphosphate reductase [Tsukamurella paurometabola
DSM 20162]
Length = 334
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E Y + +
Sbjct: 204 IRDEAVHGYYIGYKYQRGLETESPQRREELKDYTFDLLMELYANEEDYTESLYDEVGL-- 261
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++++++ AN+ +G E LF NP + + + +FF + Y
Sbjct: 262 -SEDVKKFLRYNANKALMNLGYEALFPKDATDVNPAILSALSPNADENHDFFSGSGSSYV 320
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 321 IGKAVNTEDEDWD 333
>gi|238762669|ref|ZP_04623638.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
kristensenii ATCC 33638]
gi|238698974|gb|EEP91722.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
kristensenii ATCC 33638]
Length = 323
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L + E+ Y + VG
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDISRRQEIKNFAYNLLQDLYDNEVRYTADLY--DGVGW 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF + NP + + + +FF + Y
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPADQANVNPAILAALSPNADENHDFFSGSGSSYV 309
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 310 IGKAVNTEDEDWD 322
>gi|300741626|ref|ZP_07071647.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia
dentocariosa M567]
gi|300380811|gb|EFJ77373.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia
dentocariosa M567]
Length = 325
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 53/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + E ++ + +L+E E+AY H
Sbjct: 195 IRDEAVHGYYIGYKFQRGLAKESPERQAELKEYTFNLLYELYENEVAYTHSLYDGVGW-- 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVI--DLKKEKNFFETRVTEYQ 117
+ ++++ + AN+ +G E +F + N P + + + + +FF + Y
Sbjct: 253 -SEDVKKFLHYNANKALMNLGYEAMFPASVTNVSPAILSALSPNADENHDFFSGSGSSYV 311
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 312 IGKAVNTEDEDWD 324
>gi|38234491|ref|NP_940258.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
diphtheriae NCTC 13129]
gi|38200754|emb|CAE50457.1| ribonucleoside-diphosphate reductase beta chain 2 [Corynebacterium
diphtheriae]
Length = 341
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 48/141 (34%), Gaps = 20/141 (14%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP-----K 55
+RD+++H + + P + + + ++ E +E AY +
Sbjct: 204 LRDKAVHGYYSGYKYQRGLELKPERANE-MAEFTYSLCDELLDMEKAYTADLYAPADQAN 262
Query: 56 GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL------KKEKNFF 109
GL ++ + A++ +G EP ++ +S I + +FF
Sbjct: 263 ALEGLTLDGVMSFVYYNADKALMNLGYEPAYEEQA---AHVSPEIIAALTPESNETHDFF 319
Query: 110 ETRVTEYQQGAELK-----WD 125
+ Y G + WD
Sbjct: 320 SGSGSAYIIGTAEETTEEDWD 340
>gi|153010278|ref|YP_001371492.1| ribonucleotide-diphosphate reductase subunit beta [Ochrobactrum
anthropi ATCC 49188]
gi|151562166|gb|ABS15663.1| Ribonucleoside-diphosphate reductase [Ochrobactrum anthropi ATCC
49188]
Length = 328
Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + + +L E E+ Y +
Sbjct: 198 IRDEAVHGYYIGYKFQRGLERLNEEQKQAIKDFAFELLLELYDNEVRYTEALYDGVGL-- 255
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 256 -TEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 314
Query: 118 QG 119
G
Sbjct: 315 IG 316
>gi|13274105|emb|CAC33823.1| ribonucleotide reductase beta-subunit [Corynebacterium glutamicum]
Length = 201
Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 54/132 (40%), Gaps = 12/132 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E ++ + +L++ E Y+ + +G
Sbjct: 71 IRDEAVHGYYIGYKYQKAVAKETPERQEELKEYTFDLLYDLYDNETQYSEDLYDD--LGW 128
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----NPFPWMSEVIDLKKEKNFFETRVTE 115
++++++ AN+ + +G E LF E N +S + + +FF +
Sbjct: 129 T-EDVKRFLRYNANKALNNLGYEGLFPADETKVSPNILSALSP--NADENHDFFSGSGSS 185
Query: 116 YQ--QGAELKWD 125
Y + + D
Sbjct: 186 YVIGKAENTEDD 197
>gi|190893561|ref|YP_001980103.1| ribonucleoside-diphosphate reductase protein, beta subunit
[Rhizobium etli CIAT 652]
gi|190698840|gb|ACE92925.1| ribonucleoside-diphosphate reductase protein, beta subunit
[Rhizobium etli CIAT 652]
Length = 324
Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + ++ + + +L E E Y +GL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLERLSEERRQQIKDFAFDLLLELYDNEARYTEALY--DGLGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 252 T-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 311 IGKAVATEDEDWD 323
>gi|240849861|ref|YP_002971249.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
grahamii as4aup]
gi|240266984|gb|ACS50572.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
grahamii as4aup]
Length = 324
Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + KE + + +L + +E Y + +GL
Sbjct: 194 IRDEAVHGYYIGYKFQLGFAKLDEAKKKEIKDFAFNLLFDLYNIECKYTEDLY--DALGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 252 TEDVKI-FLHYNANKALMNLGFEALFPPEVCRVNPAILAALSPNSDENHDFFSGAGSSYV 310
Query: 118 --QGAELKWD 125
+ D
Sbjct: 311 IGKAVATTDD 320
>gi|332162772|ref|YP_004299349.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|325667002|gb|ADZ43646.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 323
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + +E + + +L + EI Y VG
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKLDNNRRQEIKNFAFDLLQDLYDNEIHYTESLY--DGVGW 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF ++ NP + + + +FF + Y
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQANVNPAILAALSPNADENHDFFSGSGSSYV 309
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 310 IGKAVNTEDEDWD 322
>gi|38234435|ref|NP_940202.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
diphtheriae NCTC 13129]
gi|38200698|emb|CAE50394.1| ribonucleotide reductase beta-chain 1 [Corynebacterium diphtheriae]
Length = 328
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 54/134 (40%), Gaps = 16/134 (11%)
Query: 1 MRDESLHLNFGIDVINQ-IKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 59
+RDE++H + Q ++ E P E + + +L++ EI Y + +G
Sbjct: 198 IRDEAVHGYYIGYKFQQALRKETPE-RQAELKGYTFDLLYDLYDNEIQYTEDLYDD--LG 254
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRV 113
++++++ AN+ + +G E LF E +S I + + +FF
Sbjct: 255 WT-EDVKRFLRYNANKALNNLGYEALFPADECR---VSPAILSALSPNADENHDFFSGSG 310
Query: 114 TEYQ--QGAELKWD 125
+ Y + D
Sbjct: 311 SSYVIGKAENTTDD 324
>gi|318606878|emb|CBY28376.1| ribonucleotide reductase of class Ib (aerobic),beta subunit
[Yersinia enterocolitica subsp. palearctica Y11]
Length = 323
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + +E + + +L + EI Y VG
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKLDNNRRQEIKNFTFDLLQDLYDNEIHYTESLY--DGVGW 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF ++ NP + + + +FF + Y
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQANVNPAILAALSPNADENHDFFSGSGSSYV 309
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 310 IGKAVNTEDEDWD 322
>gi|270265355|ref|ZP_06193616.1| ribonucleoside-diphosphate reductase 2 subunit beta [Serratia
odorifera 4Rx13]
gi|270040759|gb|EFA13862.1| ribonucleoside-diphosphate reductase 2 subunit beta [Serratia
odorifera 4Rx13]
Length = 323
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 17/136 (12%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + ++ + + +L + E+ Y E VG
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDATRRQQVKNFAFDLLQDLYDNEVRYTEELY--DGVGW 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
+ ++ + AN+ +G E LF ++ I + + +FF +
Sbjct: 251 T-EDVKTFLHYNANKALMNLGYEALFPPA---MAEVNPAILSALSPNADENHDFFSGSGS 306
Query: 115 EYQQGAELK-----WD 125
Y G + WD
Sbjct: 307 SYVIGKAVNTEDEDWD 322
>gi|86359305|ref|YP_471197.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium etli
CFN 42]
gi|86283407|gb|ABC92470.1| ribonucleoside-diphosphate reductase, beta subunit protein
[Rhizobium etli CFN 42]
Length = 324
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 47/133 (35%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E Y +
Sbjct: 194 IRDEAVHGYYIGYKFQRGLETLSEERRQEIKYFAFDLLLELYDNEAKYTEALYDGVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 252 -SEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 311 IGKAVATEDEDWD 323
>gi|323167149|gb|EFZ52867.1| ribonucleoside-diphosphate reductase 2 subunit beta domain protein
[Shigella sonnei 53G]
Length = 150
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 20 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 77
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 78 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 136
Query: 118 QGAELK 123
G ++
Sbjct: 137 MGKAVE 142
>gi|300932708|ref|ZP_07147964.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
resistens DSM 45100]
Length = 331
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 48/138 (34%), Gaps = 24/138 (17%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + + +E + + +L E E Y + +G
Sbjct: 201 IRDESVHGYYIGYKYQRAMEQESAARQEELKDHTFDLLLELYDNEAQYTEDLY--DELGW 258
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----------NPFPWMSEVIDLKKEKNFF 109
++++++ AN+ + +G E LF E NP + +FF
Sbjct: 259 T-EDVKRFLRYNANKALNNLGYEGLFPADETRVSPAILSALNP--------GGDENHDFF 309
Query: 110 ETRVTEYQ--QGAELKWD 125
+ Y + D
Sbjct: 310 SGSGSSYVIGKAENTTDD 327
>gi|259502687|ref|ZP_05745589.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus antri DSM
16041]
gi|259169332|gb|EEW53827.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus antri DSM
16041]
Length = 339
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 48/130 (36%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E ++ + L+E E Y H +G
Sbjct: 197 LRDESVHGTYVGYKFQVGLHERTEKQQQDMKDWMYNFLYELYDNEEKYTHLLY--DKIGW 254
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y+
Sbjct: 255 TDDVL-TFIRYNANKALMNLGQDPLFPDTATDVNPVV-MNGISTSTSNHDFFSQVGNGYR 312
Query: 118 QG--AELKWD 125
G +K D
Sbjct: 313 LGEVEAMKDD 322
>gi|331701739|ref|YP_004398698.1| ribonucleoside-diphosphate reductase [Lactobacillus buchneri NRRL
B-30929]
gi|329129082|gb|AEB73635.1| Ribonucleoside-diphosphate reductase [Lactobacillus buchneri NRRL
B-30929]
Length = 318
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + P ++ + L++ E Y H G
Sbjct: 189 LRDESVHGTYIGYKFQIGYNQLPKEKQEDMKNWIYDFLYKLYGNEEKYTHILY--DQTGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
++++ AN+ +G +PLF T NP M+ + +FF
Sbjct: 247 TEDVL-TFIRYNANKALMNLGQDPLFPDTAEDVNPVV-MNGISTSTANHDFF 296
>gi|291092706|gb|ADD74390.1| ribonucleotide reductase small subunit [uncultured virus]
Length = 181
Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 18/48 (37%), Gaps = 6/48 (12%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 49
RDE LH +F + + H+ K ++ EA E +
Sbjct: 140 RDEGLHCDFACLLYTK------HIVHKLPNNVIYNIVREAVHAESIFF 181
>gi|291618545|ref|YP_003521287.1| NrdF [Pantoea ananatis LMG 20103]
gi|291153575|gb|ADD78159.1| NrdF [Pantoea ananatis LMG 20103]
gi|327394924|dbj|BAK12346.1| ribonucleoside-diphosphate reductase 2 beta subunit NrdF [Pantoea
ananatis AJ13355]
Length = 319
Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 45/129 (34%), Gaps = 12/129 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + QQ + +L E+ Y
Sbjct: 189 IRDEAVHGYYIGYKYQKALEQVDEGRREALQQFAIDLLLALYENEVVYTEALYGDVGW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
A + ++ + AN+ +G E LF ++ I + + +FF +
Sbjct: 247 -AEEVKTFLHYNANKALMNLGYEALFPAE---LTQVNPAILSALSPNADENHDFFSGSGS 302
Query: 115 EYQQGAELK 123
Y G ++
Sbjct: 303 SYVMGKAVE 311
>gi|260426338|ref|ZP_05780317.1| ribonucleoside-diphosphate reductase, beta subunit [Citreicella sp.
SE45]
gi|260420830|gb|EEX14081.1| ribonucleoside-diphosphate reductase, beta subunit [Citreicella sp.
SE45]
Length = 324
Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 12/133 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E +E Y E +GL
Sbjct: 195 IRDEAVHGYYIGYKFQRAMERETAERRQELKDYAFGLLFELYEIEGHYTEELYDD--LGL 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + D + +FF + Y
Sbjct: 253 T-EEVKSFLHYNANKALQNLGFEALFPPEACEVNPAILAALSPDSENH-DFFSGSGSSYV 310
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 311 IGRAVATEDDDWD 323
>gi|218680499|ref|ZP_03528396.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium etli
CIAT 894]
Length = 324
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 47/133 (35%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E Y + +
Sbjct: 194 IRDEAVHGYYIGYKFQRGLELLGEERRQELKDFAFDLLLELYDNEARYTEALYDRVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 252 -TEDVKEFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 311 IGKAVATEDEDWD 323
>gi|157371959|ref|YP_001479948.1| ribonucleotide-diphosphate reductase subunit beta [Serratia
proteamaculans 568]
gi|157323723|gb|ABV42820.1| Ribonucleoside-diphosphate reductase [Serratia proteamaculans 568]
Length = 323
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 50/136 (36%), Gaps = 17/136 (12%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + ++ + + +L + E+ Y E VG
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDAARRQQVKNFAFDLLQDLYDNEVRYTEELY--DGVGW 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
+ ++ + AN+ +G E LF + ++ I + + +FF +
Sbjct: 251 T-EDVKTFLHYNANKALMNLGYEALFPPS---MAEVNPAILSALSPNADENHDFFSGSGS 306
Query: 115 EYQQGAELK-----WD 125
Y G + WD
Sbjct: 307 SYVIGKAVNTEDDDWD 322
>gi|325963521|ref|YP_004241427.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Arthrobacter phenanthrenivorans Sphe3]
gi|323469608|gb|ADX73293.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Arthrobacter phenanthrenivorans Sphe3]
Length = 324
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y H+ +
Sbjct: 194 IRDEAVHGYYIGYKFQRGLEAVSPERRQEIKDYTFELLFELYENEVQYTHDLYDGVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A ++++ + AN+ +G E +F NP + + + +FF + Y
Sbjct: 252 -AEDVKKFLHYNANKALMNLGYEAMFPASVTDVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 311 IGKAVNTEDEDWD 323
>gi|197284313|ref|YP_002150185.1| ribonucleotide-diphosphate reductase subunit beta [Proteus
mirabilis HI4320]
gi|194681800|emb|CAR41036.1| ribonucleoside-diphosphate reductase beta chain [Proteus mirabilis
HI4320]
Length = 322
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + L + + + ++L + E+ Y + VG
Sbjct: 192 IRDEAVHGYYIGYKFQNQLLNKSSLEKQNIKDFAFSLLLDLYDNEVKYTEDLY--DSVGW 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVI--DLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF N P + + D + +FF + Y
Sbjct: 250 T-EDVKKFLHYNANKALMNLGYEALFPDEITNVSPAILSSLSPDANENHDFFSGSGSSYV 308
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 309 IGKTINTEDDDWD 321
>gi|319406095|emb|CBI79725.1| ribonucleoside-diphosphate reductase beta chain [Bartonella sp. AR
15-3]
Length = 324
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 46/122 (37%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L + +E Y + +GL
Sbjct: 194 IRDEAVHGYYIGYKFQLGFAKLHEAKKQEIKDFAFNILFDLYNIECKYTEDLY--DAIGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 252 T-EDVKVFLHYNANKALMNLGFEALFPPEVCRVNPAILAALSPNSDENHDFFSGSGSSYV 310
Query: 118 QG 119
G
Sbjct: 311 IG 312
>gi|49475007|ref|YP_033048.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
henselae str. Houston-1]
gi|49237812|emb|CAF27007.1| Ribonucleotide reductase beta-chain [Bartonella henselae str.
Houston-1]
Length = 324
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + KE + + +L + +E Y + +GL
Sbjct: 194 IRDEAVHGYYIGYKFQLGFAKLDETKKKEVKDFAFNLLFDLYNIECKYTEDLY--DALGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 252 TEDVKI-FLHYNANKALMNLGFEALFPSEVCRVNPAILAALSPNSDENHDFFSGAGSSYV 310
Query: 118 --QGAELKWD 125
+ D
Sbjct: 311 IGKAVATTDD 320
>gi|311113720|ref|YP_003984942.1| ribonucleotide-diphosphate reductase subunit beta [Rothia
dentocariosa ATCC 17931]
gi|310945214|gb|ADP41508.1| ribonucleotide-diphosphate reductase subunit beta [Rothia
dentocariosa ATCC 17931]
Length = 325
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 53/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + E ++ + +L+E E++Y H
Sbjct: 195 IRDEAVHGYYIGYKFQRGLAKESPERQAELKEYTFNLLYELYENEVSYTHSLYDGVGW-- 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVI--DLKKEKNFFETRVTEYQ 117
+ ++++ + AN+ +G E +F + N P + + + + +FF + Y
Sbjct: 253 -SEDVKKFLHYNANKALMNLGYEAMFPASVTNVSPAILSALSPNADENHDFFSGSGSSYV 311
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 312 IGKAVNTEDEDWD 324
>gi|68535550|ref|YP_250255.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
jeikeium K411]
gi|68263149|emb|CAI36637.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
jeikeium K411]
Length = 331
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 49/139 (35%), Gaps = 25/139 (17%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + +E ++ + +L E E Y + +G
Sbjct: 201 IRDESVHGYYIGYKYQRALENETPERQEELKEHTFDLLLELYDNEAQYTEDLY--DELGW 258
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----------NPFPWMSEVIDLKKEKNFF 109
++++++ AN+ + +G E LF E NP + +FF
Sbjct: 259 T-EDVKRFLRYNANKALNNLGYEGLFPADETRVSPAILSALNP--------GGDENHDFF 309
Query: 110 ETRVTEYQQG---AELKWD 125
+ Y G + D
Sbjct: 310 SGSGSSYVIGKAENTVDDD 328
>gi|99080359|ref|YP_612513.1| ribonucleotide-diphosphate reductase subunit beta [Ruegeria sp.
TM1040]
gi|99036639|gb|ABF63251.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Ruegeria sp. TM1040]
Length = 338
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 49/131 (37%), Gaps = 10/131 (7%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + KE + + +L + +E Y + +GL
Sbjct: 208 IRDEAIHGYYIGYKFQRGLERASEAERKELKDFAFGLLFDLYDIEARYTEQLY--DGLGL 265
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVI-DLKKEKNFFETRVTEY 116
+ ++ + AN+ +G E LF NP M+ + + +FF + Y
Sbjct: 266 T-EDVKNFLHYNANKALQNLGFEALFPEETCRVNPAI-MAALSPGSDENHDFFSGSGSSY 323
Query: 117 Q--QGAELKWD 125
+ + D
Sbjct: 324 VIGKAVATEDD 334
>gi|90962208|ref|YP_536124.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
salivarius UCC118]
gi|301300452|ref|ZP_07206652.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|90821402|gb|ABE00041.1| Ribonucleoside-diphosphate reductase beta chain [Lactobacillus
salivarius UCC118]
gi|300214875|gb|ADJ79291.1| Ribonucleoside-diphosphate reductase beta chain [Lactobacillus
salivarius CECT 5713]
gi|300851949|gb|EFK79633.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 326
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 8/113 (7%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E +EF +L+E E Y H VG
Sbjct: 188 LRDESVHGTYIGYKFQLGFNELSDDEQEEFTSWMYDLLYELYENEEKYTHLLY--DKVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPL----FKYTENPFPWMSEVIDLKKEKNFF 109
++++ AN+ +G++PL + NP M+ + +FF
Sbjct: 246 TDDVLV-FLRYNANKALMNLGMDPLFADGYAQNVNPVV-MNGISTSTSNHDFF 296
>gi|319404590|emb|CBI78196.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
rochalimae ATCC BAA-1498]
gi|319407580|emb|CBI81230.1| ribonucleoside-diphosphate reductase beta chain [Bartonella sp.
1-1C]
Length = 324
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 46/122 (37%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L + +E Y + +GL
Sbjct: 194 IRDEAVHGYYIGYKFQLGFAKLDEAKKQEIKDFAFNLLFDLYNIECKYTEDLY--DAIGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 252 T-EDVKVFLHYNANKALMNLGFEALFPPEVCRVNPAILAALSPNSDENHDFFSGSGSSYV 310
Query: 118 QG 119
G
Sbjct: 311 IG 312
>gi|260579705|ref|ZP_05847564.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
[Corynebacterium jeikeium ATCC 43734]
gi|258602135|gb|EEW15453.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
[Corynebacterium jeikeium ATCC 43734]
Length = 331
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 49/139 (35%), Gaps = 25/139 (17%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + +E ++ + +L E E Y + +G
Sbjct: 201 IRDESVHGYYIGYKYQRALENETPERQEELKEHTFDLLLELYDNEAQYTEDLY--DELGW 258
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----------NPFPWMSEVIDLKKEKNFF 109
++++++ AN+ + +G E LF E NP + +FF
Sbjct: 259 T-EDVKRFLRYNANKALNNLGYEGLFPADETRVSPAILSALNP--------GGDENHDFF 309
Query: 110 ETRVTEYQQG---AELKWD 125
+ Y G + D
Sbjct: 310 SGSGSSYVIGKAENTVDDD 328
>gi|317506846|ref|ZP_07964618.1| ribonucleotide reductase [Segniliparus rugosus ATCC BAA-974]
gi|316254774|gb|EFV14072.1| ribonucleotide reductase [Segniliparus rugosus ATCC BAA-974]
Length = 332
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + ++L + E+ Y + VGL
Sbjct: 202 IRDEAVHGYYIGYKYQRGLAASTEQRREELKDFTFSLLFDLYENEVEYTQDLY--DPVGL 259
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ + +G E LF E NP + + + +FF + Y
Sbjct: 260 T-EDVKKFLRYNANKALNNLGYEGLFPKDETSVNPAILSALSPNADENHDFFSGSGSSYV 318
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 319 IGKAVATEDEDWD 331
>gi|227891214|ref|ZP_04009019.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
salivarius ATCC 11741]
gi|227867088|gb|EEJ74509.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
salivarius ATCC 11741]
Length = 326
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 8/113 (7%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E +EF +L+E E Y H VG
Sbjct: 188 LRDESVHGTYIGYKFQLGFNELSDDEQEEFTSWMYDLLYELYENEEKYTHLLY--DKVGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPL----FKYTENPFPWMSEVIDLKKEKNFF 109
++++ AN+ +G++PL + NP M+ + +FF
Sbjct: 246 TDDVLV-FLRYNANKALMNLGMDPLFADGYAQNVNPVV-MNGISTSTSNHDFF 296
>gi|222102712|ref|YP_002539751.1| ribonucleoside-diphosphate reductase 2 beta chain [Agrobacterium
vitis S4]
gi|221739313|gb|ACM40046.1| ribonucleoside-diphosphate reductase 2 beta chain [Agrobacterium
vitis S4]
Length = 329
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E Y +
Sbjct: 199 IRDEAVHGYYIGYKFQRGLEPLSEEQRQETKDFAFDLLLELYDNEAKYTEALYDGVGL-- 256
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 257 -TEDVKKFLHYNANKALMNLGYEALFPPEACKVNPAILSALSPNADENHDFFSGSGSSYV 315
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 316 IGKAVATEDEDWD 328
>gi|256832970|ref|YP_003161697.1| Ribonucleoside-diphosphate reductase [Jonesia denitrificans DSM
20603]
gi|256686501|gb|ACV09394.1| Ribonucleoside-diphosphate reductase [Jonesia denitrificans DSM
20603]
Length = 325
Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L+E E+AY +
Sbjct: 195 IRDEAVHGYYIGYKYQKGLEAVTPERREELKAYTFDLLYELYDNEVAYTESLYDGVGL-- 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 253 -TEDVKKFLRYNANKALLNLGYEALFPKDETDVNPAILSALSPNADENHDFFSGSGSSYV 311
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 312 IGKAVNTEDEDWD 324
>gi|213966196|ref|ZP_03394381.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
amycolatum SK46]
gi|213951131|gb|EEB62528.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
amycolatum SK46]
Length = 334
Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 47/135 (34%), Gaps = 15/135 (11%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + ++ + +L E LE+ Y+
Sbjct: 204 LRDKAVHGYYSGYKFQRGVETYDTATQRQMKAFVFELLDELYQLELRYSEAL---YQPLG 260
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI-----DLKKEKNFFETRVTE 115
++++ AN+ +G F + E F E++ + +FF +
Sbjct: 261 LYDDVANFIRYNANKALMNLGYPQRFNHDETAFK--PEILAALTPGSDENHDFFSGSGSA 318
Query: 116 YQQG-----AELKWD 125
Y G A+ WD
Sbjct: 319 YVIGKAEDTADEDWD 333
>gi|300780546|ref|ZP_07090401.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
genitalium ATCC 33030]
gi|300533532|gb|EFK54592.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
genitalium ATCC 33030]
Length = 333
Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 53/130 (40%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + E ++ + +L++ EI Y + +G
Sbjct: 203 IRDEAVHGYYIGYKYQVGLRDESQQRQDELKEHAFDLLYDLYDNEIQYTEDLY--DPLGW 260
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ + +G E LF E +P S + + +FF + Y
Sbjct: 261 T-EDVKRFLRYNANKALNNLGYEGLFPVDETRVSPAILASLAPNADENHDFFSGSGSSYV 319
Query: 118 --QGAELKWD 125
+ + + D
Sbjct: 320 IGKAEDTQDD 329
>gi|172041159|ref|YP_001800873.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
urealyticum DSM 7109]
gi|171852463|emb|CAQ05439.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
urealyticum DSM 7109]
Length = 331
Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 45/138 (32%), Gaps = 24/138 (17%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + +E + L + E+ Y +G
Sbjct: 201 IRDESVHGYYIGYKYQRALENESPERQEELKGFVVEQLLDLYDNEVEYTESIY--DEIGW 258
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----------NPFPWMSEVIDLKKEKNFF 109
++++++ AN+ + +G + LF E NP + +FF
Sbjct: 259 T-EDVKRFLRYNANKAMNNLGYDGLFPVEETRVSAAILAALNP--------GGDENHDFF 309
Query: 110 ETRVTEYQ--QGAELKWD 125
+ Y + D
Sbjct: 310 SGSGSSYVIGKAETTTDD 327
>gi|296393703|ref|YP_003658587.1| ribonucleoside-diphosphate reductase [Segniliparus rotundus DSM
44985]
gi|296180850|gb|ADG97756.1| Ribonucleoside-diphosphate reductase [Segniliparus rotundus DSM
44985]
Length = 334
Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 54/133 (40%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + ++L + E+ Y + VGL
Sbjct: 204 IRDEAVHGYYIGYKYQRGLQMSTPERREELKDFTFSLLFDLYENEVEYTQDLY--DPVGL 261
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF E NP + + + +FF + Y
Sbjct: 262 T-EDVKKFLRYNANKALMNLGYEGLFPKDETAVNPAILSALSPNADENHDFFSGSGSSYV 320
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 321 IGKAVATEDEDWD 333
>gi|227833933|ref|YP_002835640.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
aurimucosum ATCC 700975]
gi|262184936|ref|ZP_06044357.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
aurimucosum ATCC 700975]
gi|227454949|gb|ACP33702.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
aurimucosum ATCC 700975]
Length = 329
Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q + +E + + +L++ EI Y + +G
Sbjct: 199 IRDEAVHGYYIGYKFQQGYQKLSEPEQEEMKGYAFDLLYDLYENEIDYTEDLY--DELGW 256
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++++ AN+ + +G E LF E +S I + + +FF +
Sbjct: 257 T-EDVKRFLRYNANKALNNLGFEGLFPADETR---VSPAILSSLSPNADENHDFFSGSGS 312
Query: 115 EYQ--QGAELKWD 125
Y + E D
Sbjct: 313 SYVIGKAEETTDD 325
>gi|296111477|ref|YP_003621859.1| ribonucleotide-diphosphate reductase beta subunit [Leuconostoc
kimchii IMSNU 11154]
gi|295833009|gb|ADG40890.1| ribonucleotide-diphosphate reductase beta subunit [Leuconostoc
kimchii IMSNU 11154]
Length = 325
Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + P + Q +L+E E Y HE +G
Sbjct: 193 IRDESVHGTYIGYKFQIGFNKLPLAEQESLQSWMYDLLYELYENEEKYTHELYDD--LGW 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFF 109
+ ++++ AN+ +G EP+F NP M+ + +FF
Sbjct: 251 -SEQVLTFLRYNANKALMNLGQEPMFPDGAEDVNPVV-MNGISTSTANHDFF 300
>gi|209762238|gb|ACI79431.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia
coli]
gi|320646030|gb|EFX15007.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H- str. 493-89]
gi|320651330|gb|EFX19761.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
O157:H- str. H 2687]
Length = 319
Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKHQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|330718304|ref|ZP_08312904.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc
fallax KCTC 3537]
Length = 326
Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 7/119 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + E Q +L E E + HE +G
Sbjct: 192 IRDESVHGTYIGYKFQIGFNQLSEDEQSELQSWMYDLLFELYENEEKFTHELY--DEIGW 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEY 116
++++ AN+ +G EP+F NP M+ + +FF Y
Sbjct: 250 TDSVM-TFLRYNANKALMNLGQEPMFPDGAEDVNPVV-MNGISTSTANHDFFSGVGNGY 306
>gi|326381484|ref|ZP_08203178.1| Ribonucleoside-diphosphate reductase [Gordonia neofelifaecis NRRL
B-59395]
gi|326199731|gb|EGD56911.1| Ribonucleoside-diphosphate reductase [Gordonia neofelifaecis NRRL
B-59395]
Length = 333
Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 13/134 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATL-LEIAYAHETMPKGFVG 59
+RDE++H + + + T E +Q+ + E L T
Sbjct: 203 IRDEAVHGYYIGYKYQRGL----EVQTPERRQELKDYTFELLFELYDNETDYTEALYDEV 258
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEY 116
+ ++++++ AN+ +G E +F E NP + + + +FF + Y
Sbjct: 259 GLSEDVKKFLRYNANKALMNLGYEAMFPKDETDVNPAILSALSPNADENHDFFSGSGSSY 318
Query: 117 QQGAELK-----WD 125
G + WD
Sbjct: 319 VIGKAVNTEDEDWD 332
>gi|269217712|ref|ZP_06161566.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
oral taxon 848 str. F0332]
gi|269212647|gb|EEZ78987.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
oral taxon 848 str. F0332]
Length = 325
Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 49/133 (36%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + E Q+ + +++ + E Y + +
Sbjct: 195 IRDEAVHGYYIGYKYQKALAKASQERRDELQEYAYSLVMDLYDNEELYTESLYDEMGL-- 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ +++ AN+ + +G E LF + NP + + + +FF + Y
Sbjct: 253 -TEDVKMFLRHNANKALNNLGYEALFGPDQTAVNPSILAALSPNADENHDFFSGSGSSYV 311
Query: 118 QGAEL-----KWD 125
G WD
Sbjct: 312 IGTAEATTDDDWD 324
>gi|296104353|ref|YP_003614499.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295058812|gb|ADF63550.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 319
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + +E + + +L + E++Y E G
Sbjct: 189 IRDEAVHGYYIGYKYQKGLEKVSDVRREELKGFALDLLMDLYDNELSYTEELY--AGTGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 247 E-EEVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK-----WD 125
G ++ WD
Sbjct: 306 MGKAVETEDEDWD 318
>gi|170765644|ref|ZP_02900455.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
albertii TW07627]
gi|170124790|gb|EDS93721.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
albertii TW07627]
Length = 319
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 51/126 (40%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + +E ++ + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKHQKNQEKISLTQREELKRFAFDLLLELYDNELQYTDELYAETTW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAKVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|304398691|ref|ZP_07380563.1| Ribonucleoside-diphosphate reductase [Pantoea sp. aB]
gi|304353902|gb|EFM18277.1| Ribonucleoside-diphosphate reductase [Pantoea sp. aB]
Length = 326
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q L +E QQ + +L E+AY VG
Sbjct: 196 IRDEAVHGYYIGYKYQQALATADDLRREELQQFAYDLLLALYENEVAYTEALY--ADVGW 253
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 254 V-EEVKTFLHYNANKALMNLGYEALFPAELTAVNPAILSALSPNADENHDFFSGSGSSYV 312
Query: 118 QGAELK 123
G ++
Sbjct: 313 MGKAVE 318
>gi|256848140|ref|ZP_05553584.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
coleohominis 101-4-CHN]
gi|256715200|gb|EEU30177.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
coleohominis 101-4-CHN]
Length = 333
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 7/124 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + ++ + L+E E Y H +G
Sbjct: 191 LRDESVHGTYIGYKFQVGMRQLTEKQQQDMKDWMYNFLYELYDNEGNYTHLLY--DQIGW 248
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G +PLF T NP M+ + +FF Y+
Sbjct: 249 TDDVL-TFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTTTSNHDFFSQVGNGYR 306
Query: 118 QGAE 121
GA
Sbjct: 307 LGAV 310
>gi|301066519|ref|YP_003788542.1| ribonucleotide reductase subunit beta [Lactobacillus casei str.
Zhang]
gi|300438926|gb|ADK18692.1| Ribonucleotide reductase, beta subunit [Lactobacillus casei str.
Zhang]
Length = 326
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 40/112 (35%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + + +L + E Y ++ K
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQQTLKDWMYDLLFDLYENEEKYTNDLYAKTNW-- 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
++++ AN+ +G E F T NP M+ + +FF
Sbjct: 246 -TDEVLTFLRYNANKALMNLGQETAFPDTADDVNPIV-MNGISTSTANHDFF 295
>gi|227358546|ref|ZP_03842871.1| ribonucleoside-diphosphate reductase beta chain [Proteus mirabilis
ATCC 29906]
gi|227161257|gb|EEI46331.1| ribonucleoside-diphosphate reductase beta chain [Proteus mirabilis
ATCC 29906]
Length = 337
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + L ++ + + ++L + E+ Y + VG
Sbjct: 207 IRDEAVHGYYIGYKFQNQLLNKSSLEKQDIKDFAFSLLLDLYDNEVKYTEDLY--DSVGW 264
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVI--DLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF N P + + D + +FF + Y
Sbjct: 265 T-EDVKKFLHYNANKALMNLGYEALFPDEITNVSPAILSSLSPDANENHDFFSGSGSSYV 323
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 324 IGKTINTEDDDWD 336
>gi|227112968|ref|ZP_03826624.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 320
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + ++ + + +L + E+ Y E VG
Sbjct: 190 IRDEAVHGYYIGYKFQRGLAKVDSARHQQVKNFAYDLLQDLYDNEVLYTQELY--DGVGW 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF + NP + + + +FF + Y
Sbjct: 248 T-EDVKKFLHYNANKALMNLGYEALFPASMTDVNPAILSALSPNADENHDFFSGSGSSYV 306
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 307 IGKAVNTEDEDWD 319
>gi|116494955|ref|YP_806689.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
casei ATCC 334]
gi|191638466|ref|YP_001987632.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
casei BL23]
gi|227535043|ref|ZP_03965092.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|239631445|ref|ZP_04674476.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|116105105|gb|ABJ70247.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Lactobacillus casei ATCC 334]
gi|190712768|emb|CAQ66774.1| Ribonucleoside-diphosphate reductase, beta chain [Lactobacillus
casei BL23]
gi|227187358|gb|EEI67425.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|239525910|gb|EEQ64911.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|327382498|gb|AEA53974.1| hypothetical protein LC2W_1641 [Lactobacillus casei LC2W]
gi|327385696|gb|AEA57170.1| hypothetical protein LCBD_1674 [Lactobacillus casei BD-II]
Length = 326
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 40/112 (35%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P + + +L + E Y ++ K
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPEAEQQTLKDWMYDLLFDLYENEEKYTNDLYAKTNW-- 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
++++ AN+ +G E F T NP M+ + +FF
Sbjct: 246 -TDEVLTFLRYNANKALMNLGQETAFPDTADDVNPIV-MNGISTSTANHDFF 295
>gi|50122260|ref|YP_051427.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
atrosepticum SCRI1043]
gi|49612786|emb|CAG76236.1| ribonucleoside-diphosphate reductase 2 beta chain [Pectobacterium
atrosepticum SCRI1043]
Length = 320
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + ++ + + +L + E+ Y E VG
Sbjct: 190 IRDEAVHGYYIGYKFQRALAKADPARQQQVKNFAYDLLQDLYDNEVLYTQELY--DGVGW 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF + NP + + + +FF + Y
Sbjct: 248 T-EDVKKFLHYNANKALMNLGYEALFPASMTDVNPAILSALSPNADENHDFFSGSGSSYV 306
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 307 IGKAVNTEDEDWD 319
>gi|330861133|emb|CBX71396.1| ribonucleoside-diphosphate reductase 2 subunit beta [Yersinia
enterocolitica W22703]
Length = 239
Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + +E + + +L + EI Y VG
Sbjct: 109 IRDEAVHGYYIGYKFQKGLEKLDNNRRQEIKNFAFDLLQDLYDNEIHYTESLY--DGVGW 166
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF ++ NP + + + +FF + Y
Sbjct: 167 T-EDVKKFLHYNANKALMNLGYEALFPASQANVNPAILAALSPNADENHDFFSGSGSSYV 225
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 226 IGKAVNTEDEDWD 238
>gi|123441277|ref|YP_001005264.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122088238|emb|CAL11027.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 323
Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + +E + + +L + EI Y VG
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDNNRRQEIKNFAFDLLQDLYDNEIHYTESLY--DGVGW 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF ++ NP + + + +FF + Y
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQANVNPAILAALSPNADENHDFFSGSGSSYV 309
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 310 IGKAVNTEDEDWD 322
>gi|32491358|ref|NP_871612.1| ribonucleotide-diphosphate reductase subunit beta [Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis]
gi|25166565|dbj|BAC24755.1| nrdF [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 324
Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 41/127 (32%), Gaps = 16/127 (12%)
Query: 1 MRDESLHLNFGIDVINQ----IKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
+RDE++H + + + + + + + +P
Sbjct: 194 IRDEAVHGYYIGYKFQKDLISLNEKEKKNIKDFAFNLLYKLYENEINYSYSLYKDIIPI- 252
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVI-DLKKEKNFFETR 112
+ ++ + AN+ +G E F E NP +S + + + +FF
Sbjct: 253 ------KNIISFLNYNANKSLMNLGYEQYFPDDESLVNP-DILSALTPNSNENHDFFSGS 305
Query: 113 VTEYQQG 119
+ Y G
Sbjct: 306 GSSYVMG 312
>gi|325677552|ref|ZP_08157215.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
ATCC 33707]
gi|325551623|gb|EGD21322.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
ATCC 33707]
Length = 322
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 10/124 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + ++ + +L E+AYA + VG
Sbjct: 192 IRDEAVHGYYIGYKCRKALERLDASARDAHRRYTYALLETLYANEVAYAADLY--DEVGW 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLF---KYTENP--FPWMSEVIDLKKEKNFFETRVTE 115
A YM+F AN+ +G EP+F + NP + + +FF +
Sbjct: 250 TAEVVS-YMRFNANKALANLGYEPMFRASECQVNPAILSALDP--GAGENHDFFSGSGSA 306
Query: 116 YQQG 119
Y G
Sbjct: 307 YVIG 310
>gi|199598384|ref|ZP_03211803.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
rhamnosus HN001]
gi|199590703|gb|EDY98790.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
rhamnosus HN001]
Length = 326
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E P ++ Q +L++ E Y ++ K
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELPAAEQQQLQDWMYDLLYDLYENEEKYTNDLYAKTKW-- 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G E F T NP M+ + +FF Y+
Sbjct: 246 -TDEVLTFLRYNANKALMNLGQETAFPDTADDVNPIV-MNGISTSTANHDFFSQVGNGYR 303
Query: 118 QGA--ELKWD 125
G ++ D
Sbjct: 304 LGQVEAMEDD 313
>gi|307547024|ref|YP_003899503.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
elongata DSM 2581]
gi|307219048|emb|CBV44318.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
elongata DSM 2581]
Length = 324
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 45/125 (36%), Gaps = 12/125 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + ++ + + +L + E+ Y VGL
Sbjct: 194 IRDEAVHGYYIGYKFQRALEKESAERQRQIKDTTYDLLLDLYDNEVQYTESLY--DEVGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
+ ++ + AN+ +G E LF + I ++ +FF +
Sbjct: 252 T-EDVKAFLHYNANKALMNLGYEALFPNATEA---VDPAILAALSPGAEENHDFFSGSGS 307
Query: 115 EYQQG 119
Y G
Sbjct: 308 SYVIG 312
>gi|251788642|ref|YP_003003363.1| Ribonucleoside-diphosphate reductase [Dickeya zeae Ech1591]
gi|247537263|gb|ACT05884.1| Ribonucleoside-diphosphate reductase [Dickeya zeae Ech1591]
Length = 320
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q ++ Q + +L E+ Y HE VG
Sbjct: 190 IRDEAVHGYYIGYKYQQGLKRLSTPEQRDLQLFAYELLQTLYDNEVDYTHELY--DSVGW 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ +++ + AN+ +G E LF NP + ++ +FF + Y
Sbjct: 248 SGDVI-KFLHYNANKALMNLGYEALFPADMTDVNPAILAALSPGAEENHDFFSGAGSSYV 306
Query: 118 QGAELK 123
G ++
Sbjct: 307 IGKAVE 312
>gi|261820460|ref|YP_003258566.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
wasabiae WPP163]
gi|261604473|gb|ACX86959.1| Ribonucleoside-diphosphate reductase [Pectobacterium wasabiae
WPP163]
Length = 320
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + ++ + + +L + E+ Y E VG
Sbjct: 190 IRDEAVHGYYIGYKFQRGLAKADPARQQQVKNFAYDLLQDLYDNEVLYTQELY--DGVGW 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF + NP + + + +FF + Y
Sbjct: 248 T-EDVKKFLHYNANKALMNLGYEALFPASMTDVNPAILSALSPNADENHDFFSGSGSSYV 306
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 307 IGKAVNTEDEDWD 319
>gi|260599071|ref|YP_003211642.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter
turicensis z3032]
gi|260218248|emb|CBA33173.1| Ribonucleoside-diphosphate reductase 2 subunit beta [Cronobacter
turicensis z3032]
Length = 320
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 17/136 (12%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q + + + + ++ E E+AY VG
Sbjct: 190 IRDEAVHGYYIGYKYQQGLAQVDDARRESLKTFALDLMMELYDNELAYTEALY--RDVGW 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++ + AN+ +G E LF ++ I + +FF +
Sbjct: 248 V-DDVSAFLCYNANKALMNLGYEALFPPE---MAQVNPSILAALSPGADENHDFFSGSGS 303
Query: 115 EYQQGAELK-----WD 125
Y G ++ WD
Sbjct: 304 SYVMGKAVETEDADWD 319
>gi|119387083|ref|YP_918138.1| ribonucleotide-diphosphate reductase subunit beta [Paracoccus
denitrificans PD1222]
gi|119377678|gb|ABL72442.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Paracoccus denitrificans PD1222]
Length = 329
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 12/133 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + +++ + +E Y E +
Sbjct: 200 IRDEAVHGYYIGYKYQRGLERLGEAERAALKDFAFSLIFDLYDIEAKYTAELYDGIGL-- 257
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + D + +FF + Y
Sbjct: 258 -TEDVKSFLHYNANKALQNLGYEALFPPQACEVNPAILAALSPDSENH-DFFSGSGSSYV 315
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 316 IGKAVATEDEDWD 328
>gi|253689503|ref|YP_003018693.1| Ribonucleoside-diphosphate reductase [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251756081|gb|ACT14157.1| Ribonucleoside-diphosphate reductase [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 320
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + ++ + + +L + E+ Y E VG
Sbjct: 190 IRDEAVHGYYIGYKFQRGLAKADPARQQQVKNFAYDLLQDLYDNEVLYTQELY--DGVGW 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF + NP + + + +FF + Y
Sbjct: 248 T-EDVKKFLHYNANKALMNLGYEALFPASMTDVNPAILSALSPNADENHDFFSGSGSSYV 306
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 307 IGKAVNTEDEDWD 319
>gi|227329868|ref|ZP_03833892.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 320
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + ++ + + +L + E+ Y E VG
Sbjct: 190 IRDEAVHGYYIGYKFQRGLAKADPARQQQVKNFAYDLLQDLYDNEVLYTQELY--DGVGW 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF + NP + + + +FF + Y
Sbjct: 248 T-EDVKKFLHYNANKALMNLGYEALFPASMTDVNPAILSALSPNADENHDFFSGSGSSYV 306
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 307 IGKAVNTEDEDWD 319
>gi|116490256|ref|YP_809800.1| ribonucleotide-diphosphate reductase subunit beta [Oenococcus oeni
PSU-1]
gi|290889638|ref|ZP_06552728.1| hypothetical protein AWRIB429_0118 [Oenococcus oeni AWRIB429]
gi|116090981|gb|ABJ56135.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Oenococcus oeni PSU-1]
gi|290480836|gb|EFD89470.1| hypothetical protein AWRIB429_0118 [Oenococcus oeni AWRIB429]
Length = 337
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E K+ + +L++ E Y H+ +
Sbjct: 194 IRDESVHGTYIGYKFQLAYKELTEQEQKDLNSWAYDLLYDLYDNEEKYTHQLYDEIDW-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFF 109
++++ N+ +GLEP+F NP M+ + +FF
Sbjct: 252 -FDDVMIFLRYNGNKALMNLGLEPMFADGAEDVNPVV-MNGISTSTANHDFF 301
>gi|321309596|ref|YP_004191925.1| ribonucleotide reductase subunit beta [Mycoplasma haemofelis str.
Langford 1]
gi|319801440|emb|CBY92086.1| ribonucleotide reductase of class Ib (aerobic), beta subunit
[Mycoplasma haemofelis str. Langford 1]
Length = 327
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 7/126 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +I KE ++K +L E EI Y K +
Sbjct: 197 IRDEAIHGLYIGVLSMEIFKTFNEEKQKEMKEKVICLLRELMANEIKYTELIYSKIGL-- 254
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+++++ AN+ +G E + NP + + + K +FF T+ Y
Sbjct: 255 -VEDVNRFLEYNANKALQNLGFENEYSTTDKDINPIVF-NGLKTTTKSHDFFSTKGNGYI 312
Query: 118 QGAELK 123
+ +++
Sbjct: 313 KTTKVE 318
>gi|227510692|ref|ZP_03940741.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
brevis subsp. gravesensis ATCC 27305]
gi|227513708|ref|ZP_03943757.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
buchneri ATCC 11577]
gi|227522501|ref|ZP_03952550.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
hilgardii ATCC 8290]
gi|227083027|gb|EEI18339.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
buchneri ATCC 11577]
gi|227090323|gb|EEI25635.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
hilgardii ATCC 8290]
gi|227189813|gb|EEI69880.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
brevis subsp. gravesensis ATCC 27305]
Length = 318
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + P ++ + +L++ E Y H G
Sbjct: 189 LRDESVHGTYIGYKFQIGFNQLPKTKQEDLKNWLYDLLYKLYANEEKYTHLLY--DQTGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
++++ AN+ +G +PLF T NP M+ + +FF
Sbjct: 247 TDDVLV-FIRYNANKALMNLGQDPLFPDTAEDVNPVV-MNGISTSTANHDFF 296
>gi|118586508|ref|ZP_01543952.1| ribonucleoside-diphosphate reductase 2, beta subunit [Oenococcus
oeni ATCC BAA-1163]
gi|118433072|gb|EAV39794.1| ribonucleoside-diphosphate reductase 2, beta subunit [Oenococcus
oeni ATCC BAA-1163]
Length = 337
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E KE + +L++ E Y H+ +
Sbjct: 194 IRDESVHGTYIGYKFQLAYKELTEQEQKELNSWAYDLLYDLYDNEEKYTHQLYDEIDW-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFF 109
++++ N+ +GLEP+F NP M+ + +FF
Sbjct: 252 -FDDVMIFLRYNGNKALMNLGLEPMFADGAEDVNPVV-MNGISTSTANHDFF 301
>gi|256015100|ref|YP_003105109.1| ribonucleotide-diphosphate reductase beta subunit [Brucella microti
CCM 4915]
gi|255997760|gb|ACU49447.1| ribonucleotide-diphosphate reductase beta subunit [Brucella microti
CCM 4915]
Length = 329
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y +
Sbjct: 199 IRDEAVHGYYIGHKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRYTEALYDGVGL-- 256
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 257 -TEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 315
Query: 118 QG 119
G
Sbjct: 316 IG 317
>gi|156932794|ref|YP_001436710.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter
sakazakii ATCC BAA-894]
gi|156531048|gb|ABU75874.1| hypothetical protein ESA_00590 [Cronobacter sakazakii ATCC BAA-894]
Length = 320
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q + + + S ++ E E+AY VG
Sbjct: 190 IRDEAVHGYYIGYKYQQALAQVDDARRESLKTFSLDLMMELYDNELAYTEALY--RDVGW 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++ + AN+ +G E LF NP + + +FF + Y
Sbjct: 248 V-DDVSAFLCYNANKALMNLGYEALFPPEMAQVNPSILAALSPGADENHDFFSGSGSSYV 306
Query: 118 QGAELK-----WD 125
G ++ WD
Sbjct: 307 MGKAVETEDEDWD 319
>gi|311992719|ref|YP_004009587.1| NrdB ribonucleotide reductase beta subunit [Acinetobacter phage
Ac42]
gi|298684502|gb|ADI96463.1| NrdB ribonucleotide reductase beta subunit [Acinetobacter phage
Ac42]
Length = 372
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 11/124 (8%)
Query: 3 DE-SLHLNFGIDVINQIKI-ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF--V 58
DE +H + ++V+ ++ E+ + + K +L E EI +A G V
Sbjct: 232 DEFEIHCEYRLEVLKELLASEHGQAAFAKLRPKMIKILKEVIESEITWAKFLFEDGQAIV 291
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEP-----LFKYTENPFPWMSEVIDLKKEKNF-FETR 112
G+NA Q+ F A G +F ENP P + I++ K +N ET
Sbjct: 292 GMNADVLIQWALFNAKAVAQNFGFTEEELGFVFP-EENPMPHLESWININKTQNANQETV 350
Query: 113 VTEY 116
Y
Sbjct: 351 NGAY 354
>gi|306840845|ref|ZP_07473592.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
BO2]
gi|306289240|gb|EFM60489.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
BO2]
Length = 327
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y +
Sbjct: 197 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRYTEALYDGVGL-- 254
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 255 -TEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 313
Query: 118 QG 119
G
Sbjct: 314 IG 315
>gi|261753311|ref|ZP_05997020.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
bv. 3 str. 686]
gi|261743064|gb|EEY30990.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
bv. 3 str. 686]
Length = 327
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y +
Sbjct: 197 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRYTEALYDGVGL-- 254
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 255 -TEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 313
Query: 118 QG 119
G
Sbjct: 314 IG 315
>gi|329769048|ref|ZP_08260470.1| ribonucleoside-diphosphate reductase [Gemella sanguinis M325]
gi|328839539|gb|EGF89115.1| ribonucleoside-diphosphate reductase [Gemella sanguinis M325]
Length = 322
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 7/119 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DE++H +F +I ++ +++ +L + E+ Y + + +
Sbjct: 195 DETIHGSFTGFDAQEIFKTLTKEEQEKAKKEMYKLLLDLYENELKYTQDIYGEIGLY--- 251
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQG 119
+ Y+++ ANR +G F+ + NP + ++ + +FF + Y
Sbjct: 252 DEVKDYVEYNANRALANLGYPGYFEDKDINPI--IENAMNTSTKNHDFFSVKGDGYVVS 308
>gi|326692188|ref|ZP_08229193.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc
argentinum KCTC 3773]
Length = 325
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 43/119 (36%), Gaps = 7/119 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + E Q +L++ E Y HE +G
Sbjct: 194 IRDESVHGTYIGYKFQIGFNQLSEDEQAELQAWMYDLLYDLYENEEKYTHELYDD--LGW 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEY 116
++++ AN+ +G EP+F NP M+ + +FF Y
Sbjct: 252 -YEQVMTFLRYNANKALMNLGQEPMFPDGAEDVNPVV-MNGLSTSTANHDFFSGVGNGY 308
>gi|310764903|gb|ADP09853.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia sp.
Ejp617]
Length = 319
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
++DE++H + + + L +E QQ + +L E E+AY VG
Sbjct: 189 IKDEAVHGYYIGYKYQKALEKETPLRKEELQQFAIELLLELYENELAYTEALY--AGVGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 247 Q-KDVKKFLHYNANKALMNLGYEALFPADMTDVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 306 MGKAVDTQDEDWD 318
>gi|262203177|ref|YP_003274385.1| ribonucleoside-diphosphate reductase [Gordonia bronchialis DSM
43247]
gi|262086524|gb|ACY22492.1| Ribonucleoside-diphosphate reductase [Gordonia bronchialis DSM
43247]
Length = 334
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E Y VGL
Sbjct: 204 IRDEAVHGYYIGYKYQRGLEVQTAERRQELKDYTFELLFELYDNESDYTEALY--DEVGL 261
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E +F E NP + + + +FF + Y
Sbjct: 262 T-EDVKKFLRYNANKALMNLGYEAMFPKDETDVNPAILSALSPNADENHDFFSGSGSSYV 320
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 321 IGKAVNTEDEDWD 333
>gi|163867489|ref|YP_001608688.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
tribocorum CIP 105476]
gi|161017135|emb|CAK00693.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
tribocorum CIP 105476]
Length = 324
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L + +E Y + +GL
Sbjct: 194 IRDEAVHGYYIGYKFQLGYAKLEEAKRQEVKDFAFNLLFDLYNIECKYTEDLY--DSLGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++ + AN+ +G E LF NP S + + +FF + Y
Sbjct: 252 TEDVKI-FLHYNANKALMNLGFEALFPPEVCHVNPAILASLSPNSDENHDFFSGAGSSYV 310
Query: 118 --QGAELKWD 125
+ D
Sbjct: 311 IGKAVATTDD 320
>gi|194246584|ref|YP_002004223.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
Phytoplasma mali]
gi|193806941|emb|CAP18373.1| Ribonucleoside-diphosphate reductase, beta chain [Candidatus
Phytoplasma mali]
Length = 348
Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 42/120 (35%), Gaps = 7/120 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + I L E + +L
Sbjct: 215 IRDESVHGVYIARLALNIYNSFDKLIKDELSKWMYDLLK---YFYQEQIALVKSVYNEHY 271
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
+++++ AN+ +G P F+ E NP + ++ + + + F + YQ+
Sbjct: 272 LINDVNKFVRYNANKALMNLGFNPYFEKEEVNPV--ILNGLNTETKTMDNFSMKGNGYQK 329
>gi|163844498|ref|YP_001622153.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
ATCC 23445]
gi|163675221|gb|ABY39331.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 329
Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y +
Sbjct: 199 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRYTEALYDGVGL-- 256
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 257 -TEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 315
Query: 118 QG 119
G
Sbjct: 316 IG 317
>gi|116333244|ref|YP_794771.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
brevis ATCC 367]
gi|116098591|gb|ABJ63740.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Lactobacillus brevis ATCC 367]
Length = 331
Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 5/111 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E ++ + L++ E Y H +G
Sbjct: 191 LRDESVHGTYIGYKFQLGMKELTDAEQQQMKDWMYDFLYQLYDNEEKYTHTLY--DQIGW 248
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVIDLKKEKNFF 109
++++ AN+ +G +PLF T M+ + +FF
Sbjct: 249 TEKVL-TFIRYNANKALMNLGQDPLFPDTAEDVDPVVMNGISTSTANHDFF 298
>gi|259907588|ref|YP_002647944.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
pyrifoliae Ep1/96]
gi|224963210|emb|CAX54694.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
pyrifoliae Ep1/96]
gi|283477430|emb|CAY73346.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia
pyrifoliae DSM 12163]
Length = 319
Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
++DE++H + + + L +E QQ + +L E E+AY VG
Sbjct: 189 IKDEAVHGYYIGYKYQKALEKETPLRKEELQQFAIELLLELYENELAYTEALY--AGVGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 247 Q-EDVKKFLHYNANKALMNLGYEALFPADMTDVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 306 MGKAVDTQDEDWD 318
>gi|225686158|ref|YP_002734130.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
melitensis ATCC 23457]
gi|256043236|ref|ZP_05446173.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
melitensis bv. 1 str. Rev.1]
gi|256262715|ref|ZP_05465247.1| ribonucleotide reductase [Brucella melitensis bv. 2 str. 63/9]
gi|260564448|ref|ZP_05834933.1| ribonucleotide reductase [Brucella melitensis bv. 1 str. 16M]
gi|265989661|ref|ZP_06102218.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
melitensis bv. 1 str. Rev.1]
gi|225642263|gb|ACO02176.1| Ribonucleoside-diphosphate reductase [Brucella melitensis ATCC
23457]
gi|260152091|gb|EEW87184.1| ribonucleotide reductase [Brucella melitensis bv. 1 str. 16M]
gi|263000330|gb|EEZ13020.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
melitensis bv. 1 str. Rev.1]
gi|263092503|gb|EEZ16756.1| ribonucleotide reductase [Brucella melitensis bv. 2 str. 63/9]
gi|326410495|gb|ADZ67559.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
melitensis M28]
gi|326553787|gb|ADZ88426.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
melitensis M5-90]
Length = 329
Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y +
Sbjct: 199 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRYTEALYDGVGL-- 256
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 257 -TEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 315
Query: 118 QG 119
G
Sbjct: 316 IG 317
>gi|23500072|ref|NP_699512.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
1330]
gi|62317763|ref|YP_223616.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
bv. 1 str. 9-941]
gi|83269749|ref|YP_419040.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
melitensis biovar Abortus 2308]
gi|148558197|ref|YP_001257348.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ovis
ATCC 25840]
gi|161620390|ref|YP_001594276.1| ribonucleotide-diphosphate reductase subunit beta [Brucella canis
ATCC 23365]
gi|189023015|ref|YP_001932756.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
S19]
gi|254691263|ref|ZP_05154517.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
bv. 6 str. 870]
gi|254695435|ref|ZP_05157263.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
bv. 3 str. Tulya]
gi|254699051|ref|ZP_05160879.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
bv. 2 str. 86/8/59]
gi|254699599|ref|ZP_05161427.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
bv. 5 str. 513]
gi|254706144|ref|ZP_05167972.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
pinnipedialis M163/99/10]
gi|254711557|ref|ZP_05173368.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
pinnipedialis B2/94]
gi|254712154|ref|ZP_05173965.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
M644/93/1]
gi|254715225|ref|ZP_05177036.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
M13/05/1]
gi|254720036|ref|ZP_05181847.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
83/13]
gi|254732497|ref|ZP_05191075.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
bv. 4 str. 292]
gi|256029807|ref|ZP_05443421.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
pinnipedialis M292/94/1]
gi|256059454|ref|ZP_05449656.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
neotomae 5K33]
gi|256157977|ref|ZP_05455895.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
M490/95/1]
gi|256253064|ref|ZP_05458600.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
B1/94]
gi|256256449|ref|ZP_05461985.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
bv. 9 str. C68]
gi|260167086|ref|ZP_05753897.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
F5/99]
gi|260544998|ref|ZP_05820819.1| ribonucleotide reductase [Brucella abortus NCTC 8038]
gi|260568371|ref|ZP_05838840.1| ribonucleotide reductase [Brucella suis bv. 4 str. 40]
gi|260756870|ref|ZP_05869218.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
bv. 6 str. 870]
gi|260760301|ref|ZP_05872649.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
bv. 4 str. 292]
gi|260763541|ref|ZP_05875873.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
bv. 2 str. 86/8/59]
gi|260882684|ref|ZP_05894298.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
bv. 9 str. C68]
gi|261215815|ref|ZP_05930096.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
bv. 3 str. Tulya]
gi|261216944|ref|ZP_05931225.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
M13/05/1]
gi|261220160|ref|ZP_05934441.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
B1/94]
gi|261313587|ref|ZP_05952784.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
pinnipedialis M163/99/10]
gi|261319174|ref|ZP_05958371.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
pinnipedialis B2/94]
gi|261319814|ref|ZP_05959011.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
M644/93/1]
gi|261323425|ref|ZP_05962622.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
neotomae 5K33]
gi|261750056|ref|ZP_05993765.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
bv. 5 str. 513]
gi|261756480|ref|ZP_06000189.1| ribonucleotide reductase [Brucella sp. F5/99]
gi|265985045|ref|ZP_06097780.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
83/13]
gi|265986823|ref|ZP_06099380.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
pinnipedialis M292/94/1]
gi|265996493|ref|ZP_06109050.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
M490/95/1]
gi|297249809|ref|ZP_06933510.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella
abortus bv. 5 str. B3196]
gi|306839412|ref|ZP_07472226.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp. NF
2653]
gi|306845616|ref|ZP_07478185.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
BO1]
gi|23463663|gb|AAN33517.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella suis
1330]
gi|62197956|gb|AAX76255.1| NrdF, ribonucleoside-diphosphate reductase, beta subunit [Brucella
abortus bv. 1 str. 9-941]
gi|82940023|emb|CAJ13054.1| Ribonucleotide reductase [Brucella melitensis biovar Abortus 2308]
gi|148369482|gb|ABQ62354.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella ovis
ATCC 25840]
gi|161337201|gb|ABX63505.1| Ribonucleoside-diphosphate reductase [Brucella canis ATCC 23365]
gi|189021589|gb|ACD74310.1| Ribonucleotide reductase [Brucella abortus S19]
gi|260098269|gb|EEW82143.1| ribonucleotide reductase [Brucella abortus NCTC 8038]
gi|260155036|gb|EEW90117.1| ribonucleotide reductase [Brucella suis bv. 4 str. 40]
gi|260670619|gb|EEX57559.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
bv. 4 str. 292]
gi|260673962|gb|EEX60783.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
bv. 2 str. 86/8/59]
gi|260676978|gb|EEX63799.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
bv. 6 str. 870]
gi|260872212|gb|EEX79281.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
bv. 9 str. C68]
gi|260917422|gb|EEX84283.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
bv. 3 str. Tulya]
gi|260918744|gb|EEX85397.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
B1/94]
gi|260922033|gb|EEX88601.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
M13/05/1]
gi|261292504|gb|EEX96000.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
M644/93/1]
gi|261298397|gb|EEY01894.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
pinnipedialis B2/94]
gi|261299405|gb|EEY02902.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
neotomae 5K33]
gi|261302613|gb|EEY06110.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
pinnipedialis M163/99/10]
gi|261736464|gb|EEY24460.1| ribonucleotide reductase [Brucella sp. F5/99]
gi|261739809|gb|EEY27735.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
bv. 5 str. 513]
gi|262550790|gb|EEZ06951.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
M490/95/1]
gi|264659020|gb|EEZ29281.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
pinnipedialis M292/94/1]
gi|264663637|gb|EEZ33898.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
83/13]
gi|297173678|gb|EFH33042.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella
abortus bv. 5 str. B3196]
gi|306273937|gb|EFM55764.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
BO1]
gi|306405535|gb|EFM61800.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp. NF
2653]
Length = 329
Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y +
Sbjct: 199 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRYTEALYDGVGL-- 256
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 257 -TEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 315
Query: 118 QG 119
G
Sbjct: 316 IG 317
>gi|269861603|ref|XP_002650501.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220066034|gb|EED43552.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 53
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 88 YTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 119
+ NPF +M E I L+ + NFFE R YQ+G
Sbjct: 7 HVSNPFDFM-ENISLQGKTNFFERREANYQKG 37
>gi|153949141|ref|YP_001400043.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
pseudotuberculosis IP 31758]
gi|152960636|gb|ABS48097.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia
pseudotuberculosis IP 31758]
Length = 323
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 53/136 (38%), Gaps = 17/136 (12%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + +E + + +L + E+ Y + VG
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDSVHRQEIKNFAFDLLQDLYDNEVRYTEDLY--DHVGW 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++ + AN+ +G E LF ++ +S I + + +FF +
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQAA---VSPAILAALSPNADENHDFFSGSGS 306
Query: 115 EYQQGAELK-----WD 125
Y G + WD
Sbjct: 307 SYVIGKAVNTEDEDWD 322
>gi|254702722|ref|ZP_05164550.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
bv. 3 str. 686]
Length = 335
Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y +
Sbjct: 205 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRYTEALYDGVGL-- 262
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 263 -TEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 321
Query: 118 QG 119
G
Sbjct: 322 IG 323
>gi|238796650|ref|ZP_04640156.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
mollaretii ATCC 43969]
gi|238719381|gb|EEQ11191.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
mollaretii ATCC 43969]
Length = 323
Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 53/136 (38%), Gaps = 17/136 (12%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + +E + + +L + E+ Y + VG
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDNNRRQEIKNFAFDLLQDLYDNEVRYTEDLY--DKVGW 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++ + AN+ +G E LF ++ +S I + + +FF +
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPSSQAA---VSPAILAALSPNADENHDFFSGSGS 306
Query: 115 EYQQGAELK-----WD 125
Y G + WD
Sbjct: 307 SYVIGKAVNTEDEDWD 322
>gi|157159438|ref|YP_001463986.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
E24377A]
gi|218555224|ref|YP_002388137.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
IAI1]
gi|300815921|ref|ZP_07096145.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 107-1]
gi|157081468|gb|ABV21176.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli E24377A]
gi|218361992|emb|CAQ99598.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
[Escherichia coli IAI1]
gi|300531850|gb|EFK52912.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
coli MS 107-1]
Length = 319
Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ + EPLF NP + + + +FF + Y
Sbjct: 247 -ADDVKAFLCYNANKALMNLDYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|146312797|ref|YP_001177871.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter sp.
638]
gi|145319673|gb|ABP61820.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Enterobacter sp. 638]
Length = 319
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L + E++Y E
Sbjct: 189 IRDEAVHGYYIGYKYQKGLEKISEAKREELKGFALDLLMDLYDNELSYTEELYAGTSW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 247 -ETDVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK-----WD 125
G ++ WD
Sbjct: 306 MGKAVETEDADWD 318
>gi|259417680|ref|ZP_05741599.1| ribonucleoside-diphosphate reductase, beta subunit [Silicibacter
sp. TrichCH4B]
gi|259346586|gb|EEW58400.1| ribonucleoside-diphosphate reductase, beta subunit [Silicibacter
sp. TrichCH4B]
Length = 325
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 8/123 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + KE + + +L + +E Y + +GL
Sbjct: 195 IRDEAIHGYYIGYKFQRGMERLSEAERKELKDFAFGLLFDLYDIEARYTEQLY--DGLGL 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVI-DLKKEKNFFETRVTEY 116
+ ++ + AN+ +G E LF NP M+ + + +FF + Y
Sbjct: 253 T-EDVKNFLHYNANKALQNLGFEALFPEETCRVNPAI-MAALSPGSDENHDFFSGSGSSY 310
Query: 117 QQG 119
G
Sbjct: 311 VIG 313
>gi|225628773|ref|ZP_03786807.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
str. Cudo]
gi|237817303|ref|ZP_04596295.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
str. 2308 A]
gi|225616619|gb|EEH13667.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
str. Cudo]
gi|237788116|gb|EEP62332.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
str. 2308 A]
Length = 335
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y +
Sbjct: 205 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRYTEALYDGVGL-- 262
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 263 -TEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 321
Query: 118 QG 119
G
Sbjct: 322 IG 323
>gi|239833484|ref|ZP_04681812.1| ribonucleotide-diphosphate reductase subunit beta [Ochrobactrum
intermedium LMG 3301]
gi|239821547|gb|EEQ93116.1| ribonucleotide-diphosphate reductase subunit beta [Ochrobactrum
intermedium LMG 3301]
Length = 328
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y +
Sbjct: 198 IRDEAVHGYYIGYKFQRGLERLNGEQKQEIKDFAFELLLELYDNEVRYTEALYDGVGL-- 255
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 256 -TEDVKKFLHYNANKALMNLGYEALFPADACKVNPAILSALSPNADENHDFFSGSGSSYV 314
Query: 118 QG 119
G
Sbjct: 315 IG 316
>gi|17989274|ref|NP_541907.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
melitensis bv. 1 str. 16M]
gi|17985137|gb|AAL54171.1| ribonucleoside-diphosphate reductase beta chain [Brucella
melitensis bv. 1 str. 16M]
Length = 335
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y +
Sbjct: 205 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRYTEALYDGVGL-- 262
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 263 -TEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 321
Query: 118 QG 119
G
Sbjct: 322 IG 323
>gi|304445906|pdb|3MJO|A Chain A, Small Subunit (R2f) Of Native Ribonucleotide Reductase
From Corynebacterium Ammoniagenes
gi|304445907|pdb|3MJO|B Chain B, Small Subunit (R2f) Of Native Ribonucleotide Reductase
From Corynebacterium Ammoniagenes
Length = 296
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + Q + +E++ + ++++ EI Y + +G
Sbjct: 198 IRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIYDD--LGW 255
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE 90
++++++ AN+ + +G E LF E
Sbjct: 256 T-EDVKRFLRYNANKALNNLGYEGLFPTDE 284
>gi|168262084|ref|ZP_02684057.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|205349275|gb|EDZ35906.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
Length = 319
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 46/126 (36%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + KE + + +L E EI Y G
Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIERKELKLFALDLLMELYDNEICYTEALY--AETGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 247 VND-VKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKTVE 311
>gi|145637995|ref|ZP_01793631.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
influenzae PittHH]
gi|145268805|gb|EDK08772.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
influenzae PittHH]
Length = 115
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 2 RDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPK-G 56
RDE+LHL ++N + ++P + +E +Q++ + A E A+A
Sbjct: 13 RDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGS 72
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGL 82
+GLN QY+++I C +
Sbjct: 73 MIGLNRDILVQYVEYITISVCKLLDC 98
>gi|238794433|ref|ZP_04638043.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
intermedia ATCC 29909]
gi|238726228|gb|EEQ17772.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
intermedia ATCC 29909]
Length = 330
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 17/136 (12%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + Q + + +E + + +L + E+ Y + VG
Sbjct: 200 IRDEAVHGYYIGYKFQQGLEKVDNARRQEIKNFAFDLLQDLYDNEVRYTEDLY--DKVGW 257
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++ + AN+ +G E LF ++ +S I + + +FF +
Sbjct: 258 T-EDVKKFLHYNANKALMNLGYEALFPASQAA---VSPAILAALSPNADENHDFFSGSGS 313
Query: 115 EYQQGAELK-----WD 125
Y G + WD
Sbjct: 314 SYVIGKAINTEDEDWD 329
>gi|256111767|ref|ZP_05452742.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
melitensis bv. 3 str. Ether]
Length = 190
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y +
Sbjct: 60 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRYTEALYDGVGL-- 117
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 118 -TEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 176
Query: 118 QG 119
G
Sbjct: 177 IG 178
>gi|265993236|ref|ZP_06105793.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
melitensis bv. 3 str. Ether]
gi|262764106|gb|EEZ10138.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
melitensis bv. 3 str. Ether]
Length = 189
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y +
Sbjct: 59 IRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRYTEALYDGVGL-- 116
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 117 -TEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 175
Query: 118 QG 119
G
Sbjct: 176 IG 177
>gi|317049232|ref|YP_004116880.1| ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
gi|316950849|gb|ADU70324.1| Ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
Length = 322
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 46/126 (36%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E QQ + +L A E +
Sbjct: 192 IRDEAVHGYYIGYKYQKALENVDDARREELQQFAIELLL-ALYENEVVYTEAL--YADVG 248
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A + ++ + AN+ +G E LF T NP + + + +FF + Y
Sbjct: 249 WAEEVKTFLHYNANKALMNLGYEALFPAELTTVNPAILAALSPNADENHDFFSGSGSSYV 308
Query: 118 QGAELK 123
G ++
Sbjct: 309 MGKAVE 314
>gi|228904848|ref|ZP_04068902.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis IBL 4222]
gi|228854862|gb|EEM99466.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis IBL 4222]
Length = 343
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 50/125 (40%), Gaps = 12/125 (9%)
Query: 1 MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
+RDE++H F ++ + + +E +++ +L E+ Y ++
Sbjct: 204 LRDEAIHGVTGGIFAQEIY---ENQLTEAEQQEVDKEAIQLLEMLYANELDYTNDVYAPL 260
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVT 114
+ +++++ AN+ +G + F NP + + K ++ +FF +
Sbjct: 261 GKDM-IEEVNKFLRYNANKAMMNLGYDQYFDDEYVNPI--VQNGLQTKTKQHDFFSVKGN 317
Query: 115 EYQQG 119
Y +
Sbjct: 318 GYVKA 322
>gi|222081801|ref|YP_002541166.1| ribonucleotide-diphosphate reductase subunit beta [Agrobacterium
radiobacter K84]
gi|221726480|gb|ACM29569.1| ribonucleoside-diphosphate reductase [Agrobacterium radiobacter
K84]
Length = 329
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 43/122 (35%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E Y +
Sbjct: 199 IRDEAVHGYYIGYKFQRGLERLSEEGRQEIKDFAFDLLLELYDNEAKYTEALYDGVGL-- 256
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 257 -TEDVKKFLHYNANKALMNLGYEALFPPEACKVNPAILSALSPNADENHDFFSGSGSSYV 315
Query: 118 QG 119
G
Sbjct: 316 IG 317
>gi|25028975|ref|NP_739029.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
efficiens YS-314]
gi|259508040|ref|ZP_05750940.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
[Corynebacterium efficiens YS-314]
gi|23494262|dbj|BAC19229.1| ribonucleotide reductase beta chain [Corynebacterium efficiens
YS-314]
gi|259164381|gb|EEW48935.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
[Corynebacterium efficiens YS-314]
Length = 334
Score = 42.6 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 50/125 (40%), Gaps = 12/125 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E ++ + +L++ E Y + +G
Sbjct: 204 IRDEAVHGYYVGYKYQKALARESAQRQEELKEYAFDLLYDLYENETQYTEDLY--DELGW 261
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++++ AN+ + +G E LF E +S I + + +FF +
Sbjct: 262 T-EDVKRFLRYNANKAMNNLGYEGLFPADETK---VSPAILSALSPNADENHDFFSGSGS 317
Query: 115 EYQQG 119
Y G
Sbjct: 318 SYVIG 322
>gi|75758223|ref|ZP_00738348.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74494277|gb|EAO57368.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 342
Score = 42.6 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 50/125 (40%), Gaps = 12/125 (9%)
Query: 1 MRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 56
+RDE++H F ++ + + +E +++ +L E+ Y ++
Sbjct: 203 LRDEAIHGVTGGIFAQEIY---ENQLTEAEQQEVDKEAIQLLEMLYANELDYTNDVYAPL 259
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVT 114
+ +++++ AN+ +G + F NP + + K ++ +FF +
Sbjct: 260 GKDM-IEEVNKFLRYNANKAMMNLGYDQYFDDEYVNPI--VQNGLQTKTKQHDFFSVKGN 316
Query: 115 EYQQG 119
Y +
Sbjct: 317 GYVKA 321
>gi|227876446|ref|ZP_03994558.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
mulieris ATCC 35243]
gi|269976014|ref|ZP_06183018.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
mulieris 28-1]
gi|306817405|ref|ZP_07451150.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
mulieris ATCC 35239]
gi|307700420|ref|ZP_07637459.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
mulieris FB024-16]
gi|227842987|gb|EEJ53184.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
mulieris ATCC 35243]
gi|269935842|gb|EEZ92372.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
mulieris 28-1]
gi|304649846|gb|EFM47126.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
mulieris ATCC 35239]
gi|307614405|gb|EFN93635.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
mulieris FB024-16]
Length = 322
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 6/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + E+ +E + + ++L + E+ Y +GL
Sbjct: 192 IRDEAVHGYYIGYKFQVAMRESSSSRQEELRDYTYSLLTDLYDNEVLYTETLY--DTLGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF E NP + ++ +FF + Y
Sbjct: 250 T-EDVKKFLHYNANKALMNLGYEALFPPEEIDVNPAILAALSPAAEENHDFFSGSGSSYT 308
Query: 118 QGAE 121
G
Sbjct: 309 IGTA 312
>gi|238755711|ref|ZP_04617045.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia ruckeri
ATCC 29473]
gi|238706078|gb|EEP98461.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia ruckeri
ATCC 29473]
Length = 323
Score = 42.2 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 17/136 (12%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + +E + + +L + E+ Y E
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDAVRRQEIKNFTFELLQDLYDNEVRYTEELYDGVGW-- 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
+ ++++ + AN+ +G E LF E +S I + + +FF +
Sbjct: 251 -SEDVKKFLHYNANKALMNLGYEALFPANEVT---VSAAILSALSPNADENHDFFSGSGS 306
Query: 115 EYQQGAELK-----WD 125
Y G + WD
Sbjct: 307 SYVIGKAVNTEDDDWD 322
>gi|162448128|ref|YP_001621260.1| ribonucleoside-diphosphate reductase subunit beta [Acholeplasma
laidlawii PG-8A]
gi|161986235|gb|ABX81884.1| ribonucleoside-diphosphate reductase, beta chain [Acholeplasma
laidlawii PG-8A]
Length = 369
Score = 42.2 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 48/120 (40%), Gaps = 7/120 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + ++ + ++ Q L E + +
Sbjct: 230 LRDESIHGLYVGRLAQEVFETFSNELQEQLTQWVHDFLLELYHEQNELVESIYDAVEL-- 287
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
+ + ++++ AN+ +G +P F+ + NP + ++ + + + F + YQ+
Sbjct: 288 -SHDVKIFVRYNANKALMNLGFDPYFEPEDVNPV--VLNGLNTETKTMDNFSMKGNGYQK 344
>gi|1395207|gb|AAB81405.1| ribonucleotide reductase R2-1 small subunit [Mycobacterium
tuberculosis str. Erdman]
Length = 321
Score = 42.2 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 15/135 (11%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + ++ + +LH EI YAH+ +G
Sbjct: 191 IRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDLY--DELGW 248
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVID--LKKEKNFFETRVTE 115
YM++ AN+ +G +P F NP + +D + +FF +
Sbjct: 249 TDDVLP-YMRYNANKALANLGYQPAFDRDTCQVNPA--VRAALDPGAGENHDFFSGSGSS 305
Query: 116 YQQGAE-----LKWD 125
Y G WD
Sbjct: 306 YVMGTHQPTTDTDWD 320
>gi|294853320|ref|ZP_06793992.1| ribonucleoside-diphosphate reductase [Brucella sp. NVSL 07-0026]
gi|294818975|gb|EFG35975.1| ribonucleoside-diphosphate reductase [Brucella sp. NVSL 07-0026]
Length = 329
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E E+ Y +
Sbjct: 199 IRDEAVHGYYIGYKFQRALEVLFEEKRQEIKDFAFELLLELYDNEVRYTEALYDGVGL-- 256
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 257 -TEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYV 315
Query: 118 QG 119
G
Sbjct: 316 IG 317
>gi|15841457|ref|NP_336494.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis CDC1551]
gi|57116932|ref|YP_177853.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis H37Rv]
gi|148661790|ref|YP_001283313.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis H37Ra]
gi|148823195|ref|YP_001287949.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis F11]
gi|167970496|ref|ZP_02552773.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis H37Ra]
gi|215404217|ref|ZP_03416398.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis 02_1987]
gi|215411671|ref|ZP_03420467.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis 94_M4241A]
gi|215427336|ref|ZP_03425255.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis T92]
gi|215430897|ref|ZP_03428816.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis EAS054]
gi|215446189|ref|ZP_03432941.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis T85]
gi|218753694|ref|ZP_03532490.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis GM 1503]
gi|219557941|ref|ZP_03537017.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis T17]
gi|253798971|ref|YP_003031972.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis KZN 1435]
gi|254232151|ref|ZP_04925478.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
[Mycobacterium tuberculosis C]
gi|254364798|ref|ZP_04980844.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
[Mycobacterium tuberculosis str. Haarlem]
gi|254551002|ref|ZP_05141449.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|260186953|ref|ZP_05764427.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis CPHL_A]
gi|260201080|ref|ZP_05768571.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis T46]
gi|289443470|ref|ZP_06433214.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
tuberculosis T46]
gi|289447597|ref|ZP_06437341.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis CPHL_A]
gi|289554242|ref|ZP_06443452.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis KZN 605]
gi|289570077|ref|ZP_06450304.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis T17]
gi|289746076|ref|ZP_06505454.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis 02_1987]
gi|289750559|ref|ZP_06509937.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis T92]
gi|289754082|ref|ZP_06513460.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis EAS054]
gi|289758093|ref|ZP_06517471.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis T85]
gi|289762136|ref|ZP_06521514.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
[Mycobacterium tuberculosis GM 1503]
gi|294996911|ref|ZP_06802602.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis 210]
gi|297634550|ref|ZP_06952330.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis KZN 4207]
gi|297731538|ref|ZP_06960656.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis KZN R506]
gi|298525478|ref|ZP_07012887.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis 94_M4241A]
gi|306776213|ref|ZP_07414550.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu001]
gi|306779994|ref|ZP_07418331.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu002]
gi|306784744|ref|ZP_07423066.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu003]
gi|306789101|ref|ZP_07427423.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu004]
gi|306793436|ref|ZP_07431738.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu005]
gi|306797819|ref|ZP_07436121.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu006]
gi|306803700|ref|ZP_07440368.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu008]
gi|306808274|ref|ZP_07444942.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu007]
gi|306968097|ref|ZP_07480758.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu009]
gi|306972322|ref|ZP_07484983.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu010]
gi|307080033|ref|ZP_07489203.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu011]
gi|307084607|ref|ZP_07493720.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu012]
gi|313658871|ref|ZP_07815751.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis KZN V2475]
gi|1710397|sp|Q10840|RIR2A_MYCTU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta
nrdF1; AltName: Full=Ribonucleotide reductase R2-1 small
subunit; AltName: Full=Ribonucleotide reductase small
subunit 1
gi|13881697|gb|AAK46308.1| ribonucleoside-diphosphate reductase R2-1, beta subunit
[Mycobacterium tuberculosis CDC1551]
gi|38490297|emb|CAE55444.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF1
(RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN)
[Mycobacterium tuberculosis H37Rv]
gi|124601210|gb|EAY60220.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
[Mycobacterium tuberculosis C]
gi|134150312|gb|EBA42357.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
[Mycobacterium tuberculosis str. Haarlem]
gi|148505942|gb|ABQ73751.1| ribonucleoside-diphosphate reductase subunit beta NrdF1
[Mycobacterium tuberculosis H37Ra]
gi|148721722|gb|ABR06347.1| ribonucleoside-diphosphate reductase beta subunit nrdF1
[Mycobacterium tuberculosis F11]
gi|253320474|gb|ACT25077.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis KZN 1435]
gi|289416389|gb|EFD13629.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
tuberculosis T46]
gi|289420555|gb|EFD17756.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis CPHL_A]
gi|289438874|gb|EFD21367.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis KZN 605]
gi|289543831|gb|EFD47479.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis T17]
gi|289686604|gb|EFD54092.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis 02_1987]
gi|289691146|gb|EFD58575.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis T92]
gi|289694669|gb|EFD62098.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis EAS054]
gi|289709642|gb|EFD73658.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
[Mycobacterium tuberculosis GM 1503]
gi|289713657|gb|EFD77669.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis T85]
gi|298495272|gb|EFI30566.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis 94_M4241A]
gi|308215325|gb|EFO74724.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu001]
gi|308327098|gb|EFP15949.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu002]
gi|308330477|gb|EFP19328.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu003]
gi|308334311|gb|EFP23162.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu004]
gi|308338113|gb|EFP26964.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu005]
gi|308341805|gb|EFP30656.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu006]
gi|308345291|gb|EFP34142.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu007]
gi|308349595|gb|EFP38446.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu008]
gi|308354222|gb|EFP43073.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu009]
gi|308358200|gb|EFP47051.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu010]
gi|308362132|gb|EFP50983.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu011]
gi|308365786|gb|EFP54637.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis SUMu012]
gi|323719468|gb|EGB28595.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis CDC1551A]
gi|326903590|gb|EGE50523.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis W-148]
gi|328458726|gb|AEB04149.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis KZN 4207]
Length = 322
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 15/135 (11%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + ++ + +LH EI YAH+ +G
Sbjct: 192 IRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDLY--DELGW 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVID--LKKEKNFFETRVTE 115
YM++ AN+ +G +P F NP + +D + +FF +
Sbjct: 250 TDDVLP-YMRYNANKALANLGYQPAFDRDTCQVNPA--VRAALDPGAGENHDFFSGSGSS 306
Query: 116 YQQGAE-----LKWD 125
Y G WD
Sbjct: 307 YVMGTHQPTTDTDWD 321
>gi|237785987|ref|YP_002906692.1| ribonucleoside-diphosphate reductase subunit beta [Corynebacterium
kroppenstedtii DSM 44385]
gi|237758899|gb|ACR18149.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
kroppenstedtii DSM 44385]
Length = 336
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 50/141 (35%), Gaps = 27/141 (19%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + ++ + +L+E E Y + +G
Sbjct: 206 IRDEAVHGYYIGYKYQRGQEALTQSERDGLKEYTFDLLYELYDNETQYTEDLY--DELGW 263
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----------NPFPWMSEVIDLKKEKNFF 109
++++++ AN+ + +G E LF E NP + +FF
Sbjct: 264 T-EDVKRFLRYNANKALNNLGYEALFPADETRVSPAIISSLNP--------GADENHDFF 314
Query: 110 ETRVTEYQQG-----AELKWD 125
+ Y G + WD
Sbjct: 315 SGSGSSYVIGKAESTTDEDWD 335
>gi|295097265|emb|CBK86355.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 319
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L + E++Y E G
Sbjct: 189 IRDEAVHGYYIGYKYQKGLEKVSAEKREELKGFALDLLMDLYDNELSYTEELY--AGTGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 247 E-EDVKAFLCYNANKALMNLGYEALFPPEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK-----WD 125
G ++ WD
Sbjct: 306 MGKAVETQDEDWD 318
>gi|31793160|ref|NP_855653.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
bovis AF2122/97]
gi|224990358|ref|YP_002645045.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
bovis BCG str. Tokyo 172]
gi|260205258|ref|ZP_05772749.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
tuberculosis K85]
gi|289574653|ref|ZP_06454880.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis K85]
gi|31618751|emb|CAD94705.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF1
(RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN)
[Mycobacterium bovis AF2122/97]
gi|224773471|dbj|BAH26277.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
bovis BCG str. Tokyo 172]
gi|289539084|gb|EFD43662.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
[Mycobacterium tuberculosis K85]
Length = 322
Score = 42.2 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 15/135 (11%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + ++ + +LH EI YAH+ +G
Sbjct: 192 IRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDLY--DELGW 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVID--LKKEKNFFETRVTE 115
YM++ AN+ +G +P F NP + +D + +FF +
Sbjct: 250 TDDVLP-YMRYNANKALANLGYQPAFDRDTCQVNPA--VRAALDPGAGENHDFFSGSGSS 306
Query: 116 YQQGAE-----LKWD 125
Y G WD
Sbjct: 307 YVMGTHQPTTDTDWD 321
>gi|188533084|ref|YP_001906881.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
tasmaniensis Et1/99]
gi|188028126|emb|CAO95983.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
tasmaniensis Et1/99]
Length = 319
Score = 42.2 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
++DE++H + + + +E QQ + +L E E+AY VG
Sbjct: 189 IKDEAVHGYYIGYKYQKSLEKETAPRKEELQQFAIDLLLELYENEVAYTEALY--AGVGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G + P + NP + + + +FF + Y
Sbjct: 247 Q-EDVKKFLHYNANKALMNLGYQALFPSYMTDVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK-----WD 125
G ++ WD
Sbjct: 306 MGKAVETEDEDWD 318
>gi|114766102|ref|ZP_01445111.1| ribonucleoside-diphosphate reductase, beta subunit protein
[Pelagibaca bermudensis HTCC2601]
gi|114541657|gb|EAU44698.1| ribonucleoside-diphosphate reductase, beta subunit protein
[Roseovarius sp. HTCC2601]
Length = 326
Score = 42.2 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 47/133 (35%), Gaps = 12/133 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L E +E Y E +
Sbjct: 197 IRDEAVHGYYIGYKFQRGLELESPERRQELKDYAFGLLFELYDIEARYTEELYDGIGL-- 254
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + D + +FF + Y
Sbjct: 255 -TEEVKAFLHYNANKALQNLGFEALFPPEAAEVNPAILAALSPDSENH-DFFSGSGSSYV 312
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 313 IGRAVATEDDDWD 325
>gi|300173988|ref|YP_003773154.1| ribonucleoside-diphosphate reductase subunit beta [Leuconostoc
gasicomitatum LMG 18811]
gi|299888367|emb|CBL92335.1| ribonucleoside-diphosphate reductase, beta subunit [Leuconostoc
gasicomitatum LMG 18811]
Length = 325
Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 7/119 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + P E Q +L+E E Y H+ +G
Sbjct: 193 IRDESVHGTYIGYKFQIGFNQLPAEEKSELQSWMYDLLYELYENEEKYTHQLYDD--LGW 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEY 116
++++ AN+ +G EP+F NP M+ + +FF Y
Sbjct: 251 T-EQVLTFLRYNANKALMNLGQEPMFPDGADDVNPVV-MNGISTSTANHDFFSGVGNGY 307
>gi|319899230|ref|YP_004159323.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
clarridgeiae 73]
gi|319403194|emb|CBI76753.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
clarridgeiae 73]
Length = 324
Score = 42.2 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 44/122 (36%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + +E + + ML + +E Y +GL
Sbjct: 194 IRDEAVHGYYIGYKFQLGFANLDKAKRQEIKDFAFNMLFDLYNIECKYTENLY--DSIGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 252 T-EDVKVFLHYNANKALMNLGFEALFPPEVCRVNPAILAALSPNSDENHDFFSGSGSSYV 310
Query: 118 QG 119
G
Sbjct: 311 IG 312
>gi|293394770|ref|ZP_06639061.1| ribonucleotide-diphosphate reductase subunit beta [Serratia
odorifera DSM 4582]
gi|291422721|gb|EFE95959.1| ribonucleotide-diphosphate reductase subunit beta [Serratia
odorifera DSM 4582]
Length = 319
Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 48/129 (37%), Gaps = 12/129 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + ++ + + +L + E+ Y E VG
Sbjct: 189 IRDEAVHGYYIGYKFQKGLEQVSATRRQQVKSFAFDLLQDLYDNEVRYTEELYDD--VGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
+ ++ + AN+ +G E LF + ++ I + + +FF +
Sbjct: 247 T-EDVKTFLHYNANKALMNLGYEALFPPS---MAEVNPAILSALSPNADENHDFFSGSGS 302
Query: 115 EYQQGAELK 123
Y G +
Sbjct: 303 SYVMGKAVN 311
>gi|295397108|ref|ZP_06807219.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
viridans ATCC 11563]
gi|294974650|gb|EFG50366.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
viridans ATCC 11563]
Length = 338
Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 42/132 (31%), Gaps = 11/132 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + E + +L + E Y E VG
Sbjct: 208 IRDESVHGTYLGYKFQLGYNQLSIDEQNELKDWMYALLFDLMENEEKYTEEIY--TQVGW 265
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEKNFFETRVTEY 116
++ + AN+ +G EP + NP M+ + +FF Y
Sbjct: 266 T-KEVNTFVHYNANKALQNLGFEPFYPDGTAENVNPIV-MNGISTDSSNHDFFSQVGNSY 323
Query: 117 QQG---AELKWD 125
G A D
Sbjct: 324 LMGESEAMGDDD 335
>gi|295397900|ref|ZP_06807962.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
viridans ATCC 11563]
gi|294973880|gb|EFG49645.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
viridans ATCC 11563]
Length = 323
Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + ++ Q + ++L E E Y+ +G
Sbjct: 192 LRDESVHGTYIGYKFQIAFNQLSKEEQEDMQNWAFSLLFELYENEAKYSEYIYDD--LGW 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
++++ AN+ +G +PLF T +P M+ + +FF
Sbjct: 250 TEDVKI-FLRYNANKALQNLGFDPLFPDTADDVDPIV-MNGISTGTSNHDFF 299
>gi|296086890|emb|CBI33063.3| unnamed protein product [Vitis vinifera]
Length = 75
Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 97
+NA QY++F+A+ IG E + ENPF WM
Sbjct: 1 MNATLMSQYIKFVADHLLVAIGYERKYNV-ENPFDWME 37
>gi|152964774|ref|YP_001360558.1| ribonucleotide-diphosphate reductase subunit beta [Kineococcus
radiotolerans SRS30216]
gi|151359291|gb|ABS02294.1| Ribonucleoside-diphosphate reductase [Kineococcus radiotolerans
SRS30216]
Length = 323
Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 39/126 (30%), Gaps = 14/126 (11%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHE-ATLLEIAYAHETMPKGFVG 59
+RDE++H + + L + + + + E L T
Sbjct: 193 IRDEAVHGYYIGYKFQRGL----ELVDQAKRDEIKDYAFELLYELYDNECKYTADLYDGV 248
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRV 113
+ ++ + AN+ +G E +F + I + + +FF
Sbjct: 249 GLTEDVKTFLHYNANKALMNLGYEGMFPSD---MTKVDPSILSALSPNADENHDFFSGSG 305
Query: 114 TEYQQG 119
+ Y G
Sbjct: 306 SSYVIG 311
>gi|198241755|ref|YP_002216784.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|197936271|gb|ACH73604.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|326624542|gb|EGE30887.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Dublin str. 3246]
Length = 319
Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E EI Y G
Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEICYTEALY--AETGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 247 VND-VKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKTVE 311
>gi|62181312|ref|YP_217729.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|161615703|ref|YP_001589668.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|167552693|ref|ZP_02346445.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|168822877|ref|ZP_02834877.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|197265553|ref|ZP_03165627.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|205353758|ref|YP_002227559.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|207858077|ref|YP_002244728.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|62128945|gb|AAX66648.1| ribonucleoside-diphosphate reductase 2, beta subunit [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|161365067|gb|ABX68835.1| hypothetical protein SPAB_03488 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197243808|gb|EDY26428.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|205273539|emb|CAR38525.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|205322691|gb|EDZ10530.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205340791|gb|EDZ27555.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|206709880|emb|CAR34233.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|320087214|emb|CBY96980.1| ribonucleoside-diphosphate reductase beta chain [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|322715798|gb|EFZ07369.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Choleraesuis str. A50]
gi|326628866|gb|EGE35209.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9]
Length = 319
Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E EI Y G
Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEICYTEALY--AETGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 247 VND-VKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKTVE 311
>gi|224584592|ref|YP_002638390.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|224469119|gb|ACN46949.1| ribonucleotide-diphosphate reductase beta subunit [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
Length = 319
Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E EI Y G
Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEICYTEALY--AETGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 247 VND-VKAFLCYNANKALMNLGYEALFPPEIADVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKTVE 311
>gi|238784826|ref|ZP_04628827.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
bercovieri ATCC 43970]
gi|238714242|gb|EEQ06253.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
bercovieri ATCC 43970]
Length = 323
Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 52/136 (38%), Gaps = 17/136 (12%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L + E+ Y + VG
Sbjct: 193 IRDEAVHGYYIGYKFQKGLERVDNSRRQEIKNFAFDLLQDLYDNEVRYTEDLY--DKVGW 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++ + AN+ +G E LF ++ +S I + + +FF +
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQAA---VSPAILAALSPNADENHDFFSGSGS 306
Query: 115 EYQQGAELK-----WD 125
Y G + WD
Sbjct: 307 SYVIGKAVNTEDEDWD 322
>gi|16766119|ref|NP_461734.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|167992529|ref|ZP_02573627.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|168233769|ref|ZP_02658827.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|194469894|ref|ZP_03075878.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|197251114|ref|YP_002147708.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|204929699|ref|ZP_03220773.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|238909579|ref|ZP_04653416.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
gi|585861|sp|P17424|RIR4_SALTY RecName: Full=Ribonucleoside-diphosphate reductase 2 subunit beta;
AltName: Full=R2F protein; AltName: Full=Ribonucleotide
reductase 2
gi|4389108|pdb|2R2F|A Chain A, Ribonucleotide Reductase R2f Protein From Salmonella
Typhimurium (Oxidized)
gi|4389109|pdb|2R2F|B Chain B, Ribonucleotide Reductase R2f Protein From Salmonella
Typhimurium (Oxidized)
gi|4389155|pdb|1R2F|A Chain A, Ribonucleotide Reductase R2f Protein From Salmonella
Typhimurium
gi|4389156|pdb|1R2F|B Chain B, Ribonucleotide Reductase R2f Protein From Salmonella
Typhimurium
gi|109157246|pdb|2BQ1|I Chain I, Ribonucleotide Reductase Class 1b Holocomplex R1e,R2f From
Salmonella Typhimurium
gi|109157247|pdb|2BQ1|J Chain J, Ribonucleotide Reductase Class 1b Holocomplex R1e,R2f From
Salmonella Typhimurium
gi|311979|emb|CAA51695.1| ribonucleoside-diphosphate reductase [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|16421357|gb|AAL21693.1| ribonucleoside-diphosphate reductase 2, beta subunit [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|194456258|gb|EDX45097.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|197214817|gb|ACH52214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|204321418|gb|EDZ06618.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|205329263|gb|EDZ16027.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205332191|gb|EDZ18955.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|261247949|emb|CBG25782.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267994924|gb|ACY89809.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301159373|emb|CBW18891.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|312913831|dbj|BAJ37805.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|321223605|gb|EFX48670.1| Ribonucleotide reductase of class Ib aerobic, beta subunit
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|323131164|gb|ADX18594.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhimurium str. 4/74]
Length = 319
Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E EI Y G
Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRYTEALY--AETGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 247 VND-VKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKTVE 311
>gi|295398337|ref|ZP_06808379.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
viridans ATCC 11563]
gi|294973476|gb|EFG49261.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
viridans ATCC 11563]
Length = 317
Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 43/125 (34%), Gaps = 8/125 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + Q E + F Q + L E E A+ E
Sbjct: 186 IRDESVHGTYLGYKFRQDFEELTQDEQEAFTQWMYSFLEELLEKEFAFTEEL---YTEIG 242
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY----TENPFPWMSEVIDLKKEKNFFETRVTEY 116
A + ++++ AN+ +G F+ NP M+ + +FF Y
Sbjct: 243 LAEDIKTFVKYNANKSLQNMGFGIYFENALAKDVNPIV-MNGISIETSNHDFFSQVGAGY 301
Query: 117 QQGAE 121
G
Sbjct: 302 LMGNA 306
>gi|22125124|ref|NP_668547.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
KIM 10]
gi|45442235|ref|NP_993774.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
biovar Microtus str. 91001]
gi|51597273|ref|YP_071464.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
pseudotuberculosis IP 32953]
gi|108808370|ref|YP_652286.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
Antiqua]
gi|108811297|ref|YP_647064.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
Nepal516]
gi|145598906|ref|YP_001162982.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
Pestoides F]
gi|149365457|ref|ZP_01887492.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
CA88-4125]
gi|162420024|ref|YP_001607865.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
Angola]
gi|165925252|ref|ZP_02221084.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165939901|ref|ZP_02228439.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Orientalis str. IP275]
gi|166008124|ref|ZP_02229022.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166212554|ref|ZP_02238589.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167398943|ref|ZP_02304467.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167421281|ref|ZP_02313034.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167423716|ref|ZP_02315469.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|167468720|ref|ZP_02333424.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
FV-1]
gi|170023362|ref|YP_001719867.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
pseudotuberculosis YPIII]
gi|186896377|ref|YP_001873489.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
pseudotuberculosis PB1/+]
gi|218929725|ref|YP_002347600.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
CO92]
gi|229838202|ref|ZP_04458361.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229895452|ref|ZP_04510624.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
protein [Yersinia pestis Pestoides A]
gi|229898686|ref|ZP_04513831.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
protein [Yersinia pestis biovar Orientalis str. India
195]
gi|229901543|ref|ZP_04516665.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
Nepal516]
gi|270489729|ref|ZP_06206803.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
KIM D27]
gi|294504447|ref|YP_003568509.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
Z176003]
gi|21957983|gb|AAM84798.1|AE013726_1 ribonucleoside-diphosphate reductase 2, beta chain, frag [Yersinia
pestis KIM 10]
gi|45437099|gb|AAS62651.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
biovar Microtus str. 91001]
gi|51590555|emb|CAH22196.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia
pseudotuberculosis IP 32953]
gi|108774945|gb|ABG17464.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Yersinia pestis Nepal516]
gi|108780283|gb|ABG14341.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Yersinia pestis Antiqua]
gi|115348336|emb|CAL21269.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
CO92]
gi|145210602|gb|ABP40009.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Yersinia pestis Pestoides F]
gi|149291870|gb|EDM41944.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
CA88-4125]
gi|162352839|gb|ABX86787.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
Angola]
gi|165912120|gb|EDR30759.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Orientalis str. IP275]
gi|165922859|gb|EDR40010.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165992506|gb|EDR44807.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166206485|gb|EDR50965.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Antiqua str. B42003004]
gi|166960770|gb|EDR56791.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167051447|gb|EDR62855.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167057886|gb|EDR67632.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|169749896|gb|ACA67414.1| Ribonucleoside-diphosphate reductase [Yersinia pseudotuberculosis
YPIII]
gi|186699403|gb|ACC90032.1| ribonucleotide reductase [Yersinia pseudotuberculosis PB1/+]
gi|229681472|gb|EEO77566.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
Nepal516]
gi|229688234|gb|EEO80305.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
protein [Yersinia pestis biovar Orientalis str. India
195]
gi|229694568|gb|EEO84615.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229701607|gb|EEO89634.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
protein [Yersinia pestis Pestoides A]
gi|262362562|gb|ACY59283.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
D106004]
gi|262366433|gb|ACY62990.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
D182038]
gi|270338233|gb|EFA49010.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
KIM D27]
gi|294354906|gb|ADE65247.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
Z176003]
gi|320016142|gb|ADV99713.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
biovar Medievalis str. Harbin 35]
Length = 323
Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 52/136 (38%), Gaps = 17/136 (12%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L + E+ Y + VG
Sbjct: 193 IRDEAVHGYYIGYKFQKGLGKIDSAHRQEIKNFAFDLLQDLYDNEVRYTEDLY--DHVGW 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++ + AN+ +G E LF ++ +S I + + +FF +
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQAA---VSPAILAALSPNADENHDFFSGSGS 306
Query: 115 EYQQGAELK-----WD 125
Y G + WD
Sbjct: 307 SYVIGKAVNTEDEDWD 322
>gi|168238723|ref|ZP_02663781.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|194737146|ref|YP_002115764.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|194712648|gb|ACF91869.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197288484|gb|EDY27861.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
Length = 319
Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E EI Y G
Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRYTEALY--AETGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 247 VND-VKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKTVE 311
>gi|200386806|ref|ZP_03213418.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|199603904|gb|EDZ02449.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
Length = 319
Score = 41.9 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E EI Y G
Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEICYTEALY--AETGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 247 VND-VKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKTVE 311
>gi|238790129|ref|ZP_04633906.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
frederiksenii ATCC 33641]
gi|238721798|gb|EEQ13461.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
frederiksenii ATCC 33641]
Length = 323
Score = 41.9 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 50/129 (38%), Gaps = 12/129 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L + E+ Y + VG
Sbjct: 193 IRDEAVHGYYIGYKFQKGLERVDNNRRQEIKNFAFDLLQDLYDNEVRYTEDLYDD--VGW 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++ + AN+ +G E LF ++ +S I + + +FF +
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPASQAA---VSPAILAALSPNADENHDFFSGSGS 306
Query: 115 EYQQGAELK 123
Y G +
Sbjct: 307 SYVIGKAVS 315
>gi|157310978|ref|YP_001468974.1| putative ribonucleotide reductase [Corynebacterium phage P1201]
gi|95832126|gb|ABF57526.1| putative ribonucleotide reductase [Corynebacterium phage P1201]
Length = 237
Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 46/122 (37%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
MRDE +H + ++ +++ + + EI E +GL
Sbjct: 108 MRDEGVHGYYLGYKFQKVMEGALPYERDAVKERVTNLACRLFVNEIPLIEEIYE--PLGL 165
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+A + ++++ N+ +GLE +F P +D ++ +FF + Y
Sbjct: 166 SA-QVQTFLRYNLNKAMQNLGLENVFPAEMTRVEPRILSQLSVDSEETHDFFSGSGSSYV 224
Query: 118 QG 119
G
Sbjct: 225 IG 226
>gi|67008229|emb|CAH18519.1| ribonucleoside-dihosphate reductase beta chain [Rhodobacteraceae
bacterium 198]
Length = 325
Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 8/123 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + KE + + +L + +E Y + +GL
Sbjct: 195 IRDEAIHGYYIGYKFQRGLERVSEAERKEIKDFAFALLFDLYDIEARYTEQLY--DGLGL 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVI-DLKKEKNFFETRVTEY 116
+ ++ + AN+ +G E LF NP M+ + + +FF + Y
Sbjct: 253 T-EDVKNFLHYNANKALQNLGFEALFPDESCRVNPAI-MAALSPGSDENHDFFSGSGSSY 310
Query: 117 QQG 119
G
Sbjct: 311 VIG 313
>gi|292489180|ref|YP_003532067.1| ribonucleoside-diphosphate reductase 2 subunit beta [Erwinia
amylovora CFBP1430]
gi|292900297|ref|YP_003539666.1| ribonucleoside-diphosphate reductase 2 subunit beta [Erwinia
amylovora ATCC 49946]
gi|291200145|emb|CBJ47271.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia
amylovora ATCC 49946]
gi|291554614|emb|CBA22274.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia
amylovora CFBP1430]
Length = 319
Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
++DE++H + + + +E QQ + +L E E+AY VG
Sbjct: 189 IKDEAVHGYYIGYKYQKALEKETPQRKEELQQFAIELLLELYENELAYTDALY--SGVGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 247 Q-EDVKKFLHYNANKALMNLGYEALFPAEMTDVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 306 MGKAVDTEDEDWD 318
>gi|312173339|emb|CBX81594.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia
amylovora ATCC BAA-2158]
Length = 319
Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
++DE++H + + + +E QQ + +L E E+AY VG
Sbjct: 189 IKDEAVHGYYIGYKYQKALEKETPQRKEELQQFAIELLLELYENELAYTDALY--SGVGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 247 Q-EDVKKFLHYNANKALMNLGYEALFPAEMTDVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAEL-----KWD 125
G + WD
Sbjct: 306 MGKAVDTEDEDWD 318
>gi|319948549|ref|ZP_08022680.1| ribonucleotide-diphosphate reductase subunit beta [Dietzia cinnamea
P4]
gi|319437796|gb|EFV92785.1| ribonucleotide-diphosphate reductase subunit beta [Dietzia cinnamea
P4]
Length = 338
Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 12/125 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + E + + +L E E Y + VG
Sbjct: 208 IRDEAVHGYYIGYKYQRGLEHVTQAERDELKDYTFELLFELYDNEADYTEDLY--DPVGW 265
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++++ AN+ +G E +F E + I + + +FF +
Sbjct: 266 T-EDVKKFLRYNANKALMNMGYEGMFPKDETD---VDPAILSALSPNADENHDFFSGSGS 321
Query: 115 EYQQG 119
Y G
Sbjct: 322 SYVMG 326
>gi|227548647|ref|ZP_03978696.1| ribonucleoside-diphosphate reductase [Corynebacterium
lipophiloflavum DSM 44291]
gi|227079261|gb|EEI17224.1| ribonucleoside-diphosphate reductase [Corynebacterium
lipophiloflavum DSM 44291]
Length = 332
Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + E + + +L++ E Y + +G
Sbjct: 202 IRDEAVHGYYIGYKYQRGQADLSQAERDELKDYTFNLLYDLYENETQYTEDIY--DPLGW 259
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++++ AN+ + +G E LF E +S I + + +FF +
Sbjct: 260 T-EDVKRFLRYNANKALNNLGYEGLFPQDETK---VSPAILASLSPNADENHDFFSGSGS 315
Query: 115 EYQ--QGAELKWD 125
Y + + + D
Sbjct: 316 SYVIGKAEDTQDD 328
>gi|323359290|ref|YP_004225686.1| ribonucleotide reductase, beta subunit [Microbacterium testaceum
StLB037]
gi|323275661|dbj|BAJ75806.1| ribonucleotide reductase, beta subunit [Microbacterium testaceum
StLB037]
Length = 324
Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 49/130 (37%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + + ++L+E E+ Y +
Sbjct: 194 IRDEAVHGYYIGYKFQRGLETVDQARRDDIKDYTFSLLYELYDNEVGYTQSLYDAVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++++ + AN+ +G E +F + NP + + + +FF + Y
Sbjct: 252 -SEDVKKFLHYNANKALMNLGYEAMFPSSVTNVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 118 --QGAELKWD 125
+ + D
Sbjct: 311 IGKAEATEDD 320
>gi|295395248|ref|ZP_06805456.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacterium
mcbrellneri ATCC 49030]
gi|294972010|gb|EFG47877.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacterium
mcbrellneri ATCC 49030]
Length = 324
Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 49/130 (37%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + E + + +L++ E+ Y H+ +
Sbjct: 194 IRDEAVHGYYIGYKYQRALANESTERRDELKDYTFALLYDLYENEVQYTHDLYDSVGL-- 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++++ + AN+ +G E +F T NP + + +FF + Y
Sbjct: 252 -SEDVKKFLNYNANKALMNLGYEAMFPSTVTDVNPAILSALSPSSDENHDFFSGSGSSYV 310
Query: 118 --QGAELKWD 125
+ + D
Sbjct: 311 IGKAENTEDD 320
>gi|238759171|ref|ZP_04620339.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia aldovae
ATCC 35236]
gi|238702587|gb|EEP95136.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia aldovae
ATCC 35236]
Length = 323
Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 52/136 (38%), Gaps = 17/136 (12%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + + E + + +L + E+ Y + VG
Sbjct: 193 IRDEAVHGYYIGYKFQKGLEKVDNARRLEIKNFAFDLLQDLYDNEVRYTEDLY--DKVGW 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++ + AN+ +G E LF ++ +S I + + +FF +
Sbjct: 251 T-EDVKKFLHYNANKALMNLGYEALFPISQAA---VSPAILAALSPNADENHDFFSGSGS 306
Query: 115 EYQQGAELK-----WD 125
Y G + WD
Sbjct: 307 SYVIGKAVNTEDEDWD 322
>gi|306834752|ref|ZP_07467817.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
accolens ATCC 49726]
gi|304569364|gb|EFM44864.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
accolens ATCC 49726]
Length = 337
Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 50/133 (37%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + +E ++ + ++ + LE+ Y+ E
Sbjct: 207 LRDKAVHGYYSGYKFQRGLDHATEDRREEMREFTFDLVRKLYDLEMRYSGELYE---PYG 263
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G LF Y E NP + + +FF + Y
Sbjct: 264 LMDDVATFVRYNANKALMNLGYPNLFPYEECQVNPKILAALTPGSDENHDFFSGSGSSYI 323
Query: 118 QG-----AELKWD 125
G ++ WD
Sbjct: 324 IGKAVETSDADWD 336
>gi|168244605|ref|ZP_02669537.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|168464072|ref|ZP_02697989.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|194442875|ref|YP_002042053.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194450827|ref|YP_002046771.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194401538|gb|ACF61760.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194409131|gb|ACF69350.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|195633109|gb|EDX51523.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|205336532|gb|EDZ23296.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
Length = 319
Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E EI Y G
Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALNLLMELYDNEIRYTEALY--AETGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 247 VND-VKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKTVE 311
>gi|288933942|ref|YP_003438001.1| ribonucleoside-diphosphate reductase [Klebsiella variicola At-22]
gi|290510980|ref|ZP_06550349.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
1_1_55]
gi|288888671|gb|ADC56989.1| Ribonucleoside-diphosphate reductase [Klebsiella variicola At-22]
gi|289775973|gb|EFD83972.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
1_1_55]
Length = 320
Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 13/134 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHE-ATLLEIAYAHETMPKGFVG 59
+RDE++H + + + + +++ + + L +
Sbjct: 190 IRDEAVHGYYIGYKYQKGL----EIVSPGKREELKNFALDLLMDLYDNELAYSRELYGES 245
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEY 116
++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 246 GWFDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPAILAALSPNADENHDFFSGSGSSY 305
Query: 117 QQG-----AELKWD 125
G A+ WD
Sbjct: 306 VIGKTEETADDDWD 319
>gi|238896131|ref|YP_002920867.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
pneumoniae NTUH-K2044]
gi|238548449|dbj|BAH64800.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
Length = 333
Score = 41.1 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 13/134 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHE-ATLLEIAYAHETMPKGFVG 59
+RDE++H + + + + +++ + + L +
Sbjct: 203 IRDEAVHGYYIGYKYQKGL----EIVSPGKREELKNFALDLLMDLYDNELAYSRELYGES 258
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEY 116
++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 259 GWFDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPAILAALSPNADENHDFFSGSGSSY 318
Query: 117 QQG-----AELKWD 125
G A+ WD
Sbjct: 319 VIGKMEETADDDWD 332
>gi|284009251|emb|CBA76360.1| ribonucleoside-diphosphate reductase beta chain [Arsenophonus
nasoniae]
Length = 321
Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 49/132 (37%), Gaps = 18/132 (13%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + I+ E + + +L EI Y+ VG
Sbjct: 191 IRDEAIHGYYIGYKFQKSLIKYSDKEKDEIKDFAYLLLLNLYENEIKYSESLY--DEVGW 248
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---------DLKKEKNFFET 111
++++ + AN+ +G E LF T M++V + + +FF
Sbjct: 249 T-EDVKKFLHYNANKALMNLGYESLFPET------MTDVSPAILSALSPNANENHDFFSG 301
Query: 112 RVTEYQQGAELK 123
+ Y G +
Sbjct: 302 SGSSYIIGKTIT 313
>gi|227502192|ref|ZP_03932241.1| ribonucleoside-diphosphate reductase [Corynebacterium accolens ATCC
49725]
gi|227077016|gb|EEI14979.1| ribonucleoside-diphosphate reductase [Corynebacterium accolens ATCC
49725]
Length = 337
Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 50/133 (37%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + +E ++ + ++ + LE+ Y+ E
Sbjct: 207 LRDKAVHGYYSGYKFQRGLDHATEARREEMREFTFDLVRKLYDLEMRYSGELYE---PYG 263
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G LF Y E NP + + +FF + Y
Sbjct: 264 LMDDVATFVRYNANKALMNLGYPNLFPYEECQVNPKILAALTPGSDENHDFFSGSGSSYI 323
Query: 118 QG-----AELKWD 125
G ++ WD
Sbjct: 324 IGKAVETSDADWD 336
>gi|206577235|ref|YP_002236984.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
pneumoniae 342]
gi|206566293|gb|ACI08069.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
pneumoniae 342]
Length = 320
Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 40/123 (32%), Gaps = 8/123 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHE-ATLLEIAYAHETMPKGFVG 59
+RDE++H + + + + +++ + + L +
Sbjct: 190 IRDEAVHGYYIGYKYQKGL----EIVSPGKREELKNFALDLLMDLYDNELAYSRELYGES 245
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEY 116
++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 246 GWFDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPAILAALSPNADENHDFFSGSGSSY 305
Query: 117 QQG 119
G
Sbjct: 306 VIG 308
>gi|330013348|ref|ZP_08307619.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
MS 92-3]
gi|328533536|gb|EGF60259.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
MS 92-3]
Length = 320
Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 13/134 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHE-ATLLEIAYAHETMPKGFVG 59
+RDE++H + + + + +++ + + L +
Sbjct: 190 IRDEAVHGYYIGYKYQKGL----EIVSPGKREELKNFALDLLMDLYDNELAYSRELYGES 245
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEY 116
++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 246 GWFDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPAILAALSPNADENHDFFSGSGSSY 305
Query: 117 QQG-----AELKWD 125
G A+ WD
Sbjct: 306 VIGKMEETADDDWD 319
>gi|312865304|ref|ZP_07725532.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
downei F0415]
gi|311099415|gb|EFQ57631.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
downei F0415]
Length = 316
Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 43/123 (34%), Gaps = 8/123 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + Q E +FQ+ L E E AY E +
Sbjct: 186 IRDESVHGTYLGYKFRQGFDELSPEDQADFQKWMYGFLDELLENEFAYTEEVYSDIGL-- 243
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEKNFFETRVTEY 116
+ ++++ AN+ +G F+ NP M+ + +FF Y
Sbjct: 244 -EDDIKTFVKYNANKSLQNMGFGIYFENATANDVNPIV-MNGISIETANHDFFSQVGAGY 301
Query: 117 QQG 119
G
Sbjct: 302 LMG 304
>gi|300718018|ref|YP_003742821.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
billingiae Eb661]
gi|299063854|emb|CAX60974.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
billingiae Eb661]
Length = 319
Score = 41.1 bits (95), Expect = 0.058, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 46/126 (36%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
++DE++H + + + E QQ + +L E+AY
Sbjct: 189 IKDEAVHGYYIGYKYQKALEKESPARKDELQQFAVELLLALYENELAYTEALYDGVGW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 247 -SEEVKKFLHYNANKALMNLGYEALFPAEMTDVNPAILSALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G +
Sbjct: 306 MGKAVD 311
>gi|322614368|gb|EFY11299.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322621567|gb|EFY18420.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322624428|gb|EFY21261.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322626626|gb|EFY23431.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322633514|gb|EFY30256.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322638443|gb|EFY35141.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322639746|gb|EFY36430.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322643792|gb|EFY40342.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322649478|gb|EFY45912.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322655932|gb|EFY52232.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322661327|gb|EFY57552.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322662525|gb|EFY58733.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322666899|gb|EFY63074.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322671269|gb|EFY67392.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322677724|gb|EFY73787.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322681449|gb|EFY77479.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322683848|gb|EFY79858.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323193763|gb|EFZ78966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323197449|gb|EFZ82586.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203264|gb|EFZ88293.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323205210|gb|EFZ90185.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|323212777|gb|EFZ97588.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323218081|gb|EGA02793.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323221656|gb|EGA06069.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323225124|gb|EGA09375.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323230844|gb|EGA14962.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323234805|gb|EGA18891.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323238844|gb|EGA22894.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323241544|gb|EGA25575.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323248309|gb|EGA32245.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323252925|gb|EGA36759.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323256953|gb|EGA40662.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323260572|gb|EGA44183.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323264370|gb|EGA47876.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323269504|gb|EGA52957.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
Length = 319
Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E EI Y E + +
Sbjct: 189 IRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEICY-TEALYAETDWV 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
N + ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 248 N--DVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKTVE 311
>gi|184156148|ref|YP_001844488.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
fermentum IFO 3956]
gi|227515317|ref|ZP_03945366.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC
14931]
gi|260662379|ref|ZP_05863274.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
fermentum 28-3-CHN]
gi|183227492|dbj|BAG28008.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
fermentum IFO 3956]
gi|227086331|gb|EEI21643.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC
14931]
gi|260553070|gb|EEX26013.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
fermentum 28-3-CHN]
gi|299783625|gb|ADJ41623.1| Ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
fermentum CECT 5716]
Length = 316
Score = 40.7 bits (94), Expect = 0.062, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 8/125 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + Q E F+ +L + E A+
Sbjct: 186 IRDESVHGTYLGYKFQQAFAELTPDEQTRFRAWMDDLLADLLENEFAFTEV---VYAPIQ 242
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEKNFFETRVTEY 116
+Q++++ AN+ + +G +F + NP M+ + +FF Y
Sbjct: 243 MVEDVKQFVRYNANKAMNNMGFAAIFNHAAIEDINPIV-MNGISTETANHDFFSQVGAGY 301
Query: 117 QQGAE 121
G
Sbjct: 302 LMGNA 306
>gi|213965886|ref|ZP_03394077.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
amycolatum SK46]
gi|213951464|gb|EEB62855.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
amycolatum SK46]
Length = 338
Score = 40.7 bits (94), Expect = 0.062, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 47/125 (37%), Gaps = 12/125 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + E + + ++ + EI Y E +G
Sbjct: 208 IRDEAVHGYYIGYKYQRNLERLTQAERDELKDYTFDLMFDLYDNEIQYTEEMY--DELGW 265
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++++ N+ + +G E +F E +S I + + +FF +
Sbjct: 266 T-EDVKRFLRYNGNKALNNLGYEGMFPADETR---VSPSILSALSPNADENHDFFSGSGS 321
Query: 115 EYQQG 119
Y G
Sbjct: 322 SYVMG 326
>gi|315654326|ref|ZP_07907234.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
curtisii ATCC 51333]
gi|315657771|ref|ZP_07910651.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
gi|315491361|gb|EFU80978.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
curtisii ATCC 51333]
gi|315491568|gb|EFU81179.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
Length = 322
Score = 40.7 bits (94), Expect = 0.063, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 48/124 (38%), Gaps = 6/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + E+ +E + + ++L + E Y +GL
Sbjct: 192 IRDEAVHGYYIGYKYQLAMRESSESRRQEMKDYTFSLLMDLYDNEELYTETLY--DPLGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF + NP + + +FF + Y
Sbjct: 250 T-EDVKKFLKYNANKALMNLGYEALFTADQVNVNPAILAALSPAADENHDFFSGSGSSYA 308
Query: 118 QGAE 121
G
Sbjct: 309 IGTA 312
>gi|152971534|ref|YP_001336643.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|150956383|gb|ABR78413.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
Length = 320
Score = 40.7 bits (94), Expect = 0.065, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 13/134 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHE-ATLLEIAYAHETMPKGFVG 59
+RDE++H + + + + +++ + + L +
Sbjct: 190 IRDEAVHGYYIGYKYQKGL----EIVSPGKREELKNFALDLLMDLYDNELAYSRELYGES 245
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEY 116
++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 246 GWFDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPAILAALSPNADENHDFFSGSGSSY 305
Query: 117 QQG-----AELKWD 125
G A+ WD
Sbjct: 306 VIGKMEETADDDWD 319
>gi|261342124|ref|ZP_05969982.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
cancerogenus ATCC 35316]
gi|288315455|gb|EFC54393.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
cancerogenus ATCC 35316]
Length = 319
Score = 40.7 bits (94), Expect = 0.066, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + +E + + +L + E++Y G
Sbjct: 189 IRDEAVHGYYIGYKYQKGLEIVSEARREELKGFALDLLMDLYDNELSYTEALY--AGSGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 247 E-DEVKAFLCYNANKALMNLGYEALFPPDMADVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK-----WD 125
G ++ WD
Sbjct: 306 MGKAVETEDEDWD 318
>gi|298345735|ref|YP_003718422.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
curtisii ATCC 43063]
gi|304390565|ref|ZP_07372518.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|298235796|gb|ADI66928.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
curtisii ATCC 43063]
gi|304326321|gb|EFL93566.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
Length = 322
Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 48/124 (38%), Gaps = 6/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + E+ +E + + ++L + E Y +GL
Sbjct: 192 IRDEAVHGYYIGYKYQLAMRESSESRRQEMKDYTFSLLMDLYDNEELYTETLY--DPLGL 249
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++++ AN+ +G E LF + NP + + +FF + Y
Sbjct: 250 T-EDVKKFLKYNANKALMNLGYEALFTADQVNVNPAILAALSPAADENHDFFSGSGSSYA 308
Query: 118 QGAE 121
G
Sbjct: 309 IGTA 312
>gi|116617385|ref|YP_817756.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gi|116096232|gb|ABJ61383.1| ribonucleoside-diphosphate reductase class Ib beta subunit
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
Length = 325
Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 46/130 (35%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + E Q +L+E E Y HE +G
Sbjct: 193 IRDESVHGTYIGYKFQIGFNKISAEERTELQSWMYDLLYELYENEEKYTHELYDD--LGW 250
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G EP+F NP M+ + +FF Y
Sbjct: 251 T-EQVLTFLRYNANKALMNLGQEPMFPDGAEDVNPVV-MNGISTSTANHDFFSGVGNGYL 308
Query: 118 QG--AELKWD 125
G + D
Sbjct: 309 LGEVEAMNDD 318
>gi|325284717|ref|YP_004264180.1| Ribonucleoside-diphosphate reductase [Deinococcus proteolyticus
MRP]
gi|324316206|gb|ADY27320.1| Ribonucleoside-diphosphate reductase [Deinococcus proteolyticus
MRP]
Length = 348
Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 41/118 (34%), Gaps = 7/118 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DE++H + + + E L + E+AY +
Sbjct: 198 DEAVHGVYVALLAQEKFAEMNEAEQAYALAWYEETLMKLYRNELAYTEMLYADVGL---V 254
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
++++++ N +G+E F+ E NP + I K +FF + Y +
Sbjct: 255 DEVKKFIRYNCNVLADNLGVERSFEDEEINPI--VRNGIKAKGTTHDFFSAKGNSYAK 310
>gi|262043918|ref|ZP_06017006.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259038772|gb|EEW39955.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 320
Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 13/134 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHE-ATLLEIAYAHETMPKGFVG 59
+RDE++H + + + + +++ + + L +
Sbjct: 190 IRDEAVHGYYIGYKYQKGL----EIVSPGKREELKNFALDLLMDLYDNELAYSRELYGES 245
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEY 116
++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 246 GWFDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPAILAALSPNADENHDFFSGSGSSY 305
Query: 117 QQG-----AELKWD 125
G A+ WD
Sbjct: 306 VIGKMEETADDDWD 319
>gi|227431268|ref|ZP_03913322.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
gi|227353030|gb|EEJ43202.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
Length = 327
Score = 40.7 bits (94), Expect = 0.071, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 46/130 (35%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + E Q +L+E E Y HE +G
Sbjct: 195 IRDESVHGTYIGYKFQIGFNKISAEERTELQSWMYDLLYELYENEEKYTHELYDD--LGW 252
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G EP+F NP M+ + +FF Y
Sbjct: 253 T-EQVLTFLRYNANKALMNLGQEPMFPDGAEDVNPVV-MNGISTSTANHDFFSGVGNGYL 310
Query: 118 QG--AELKWD 125
G + D
Sbjct: 311 LGEVEAMNDD 320
>gi|94985875|ref|YP_605239.1| ribonucleotide-diphosphate reductase subunit beta [Deinococcus
geothermalis DSM 11300]
gi|94556156|gb|ABF46070.1| Ribonucleoside-diphosphate reductase [Deinococcus geothermalis DSM
11300]
Length = 319
Score = 40.7 bits (94), Expect = 0.076, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 5/118 (4%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DE+LH ++ + + P + + + E E AY E VGL +
Sbjct: 188 DEALHGSYVGLLFQERFAALPQGEQAAVRARFEQLAREFYENECAYTDEVY--AEVGLAS 245
Query: 63 PSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETR-VTEYQQ 118
+ ++++ N C +GLE LF E NP +FF + Y +
Sbjct: 246 E-VKTFVRYNFNICCDNLGLERLFPEEEVNPLVLNGIRATGGTTHDFFSIKGAGGYAK 302
>gi|71894414|ref|YP_278522.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
synoviae 53]
gi|71851202|gb|AAZ43811.1| ribonucleoside-diphosphate reductase beta chain [Mycoplasma
synoviae 53]
Length = 339
Score = 40.3 bits (93), Expect = 0.077, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 44/122 (36%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ LH + Q + P E+++ + +++E LE + E GL
Sbjct: 209 LRDKVLHNYYSGYKYRQKVEKLPKEKQAEYKEFTFKIMYELIELEKDFLRELY--DGFGL 266
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVID--LKKEKNFFETRVTEYQ 117
+ + + A + G E F E P + + + +FF + Y
Sbjct: 267 ADEAIA-FSLYNAGKFLQNCGYESPFTPEETKISPEVFAQLSARADENHDFFSGNGSSYV 325
Query: 118 QG 119
G
Sbjct: 326 MG 327
>gi|223954268|gb|ACN30264.1| UL40 [Anatid herpesvirus 1]
Length = 46
Score = 40.3 bits (93), Expect = 0.078, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 9/49 (18%)
Query: 80 IGLEPLF----KYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAELKW 124
IGL PLF + P +M+ ++ NFFE R T Y G+ L
Sbjct: 2 IGLAPLFDEPPPKHDFPLAFMA----TSQQTNFFERRNTTYA-GSVLND 45
>gi|161502142|ref|YP_001569254.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:-- str.
RSK2980]
gi|160863489|gb|ABX20112.1| hypothetical protein SARI_00165 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 319
Score = 40.3 bits (93), Expect = 0.095, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 47/126 (37%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E Y E + +
Sbjct: 189 IRDEAVHGYYIGYKYQIALQKQSAIEREELKLFALDLLMELYDNETRY-TEALYAETDWV 247
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 248 --DDVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|323342959|ref|ZP_08083190.1| ribonucleotide-diphosphate reductase subunit beta [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|322463023|gb|EFY08218.1| ribonucleotide-diphosphate reductase subunit beta [Erysipelothrix
rhusiopathiae ATCC 19414]
Length = 358
Score = 39.9 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 9/129 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + ++ ++ + + T +A E E +
Sbjct: 224 LRDESIHGLYIGNLAMELYRKFDAETQASLYEWLTT-YLDAIYEEEVELIEAIYDPVELS 282
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQ- 117
+ ++++ AN+ +G + ++Y E NP + ++ + + + F + YQ
Sbjct: 283 HDVKI--FVRYNANKAMMNLGFDAYYEYEEVNPV--VLNGLNTETKTMDNFSMKGNGYQK 338
Query: 118 -QGAELKWD 125
+ L D
Sbjct: 339 MKSESLHDD 347
>gi|146322252|ref|YP_001174719.1| putative ribonucleotide reductase subunit beta [Lactococcus lactis]
gi|145968743|gb|ABQ00021.1| putative ribonucleotide reductase subunit beta [Lactococcus lactis]
Length = 316
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 44/132 (33%), Gaps = 11/132 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + Q E + F + L E E AY E
Sbjct: 186 IRDESVHGTYLGYKFRQDFNELSITEQENFTNWMYSFLEELLDNEFAYTEE---VYSEIG 242
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEKNFFETRVTEY 116
+ ++++ AN+ +G + FK NP M+ + +FF Y
Sbjct: 243 LVEDIKTFVKYNANKSLQNMGFDIYFKDASANDVNPIV-MNGISIETANHDFFSQVGAGY 301
Query: 117 QQGAE---LKWD 125
G L D
Sbjct: 302 LMGEAEEMLDDD 313
>gi|51247866|pdb|1UZR|A Chain A, Crystal Structure Of The Class Ib Ribonucleotide Reductase
R2f-2 Subunit From Mycobacterium Tuberculosis
gi|51247867|pdb|1UZR|B Chain B, Crystal Structure Of The Class Ib Ribonucleotide Reductase
R2f-2 Subunit From Mycobacterium Tuberculosis
gi|51247868|pdb|1UZR|C Chain C, Crystal Structure Of The Class Ib Ribonucleotide Reductase
R2f-2 Subunit From Mycobacterium Tuberculosis
Length = 296
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + E + + +L E E+ Y + VGL
Sbjct: 194 IRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDLY--DEVGL 251
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP 92
++++++ AN+ +G E LF E NP
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNP 285
>gi|193890961|gb|ACF28634.1| ribonucleotide reductase [Amphidinium carterae]
Length = 213
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 7/36 (19%), Positives = 15/36 (41%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTM 37
RDE LH +F + +++ P + + +
Sbjct: 178 RDEGLHADFACLIYRKLQNHLPEDVVHSIMRGAVEV 213
>gi|255325476|ref|ZP_05366578.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
tuberculostearicum SK141]
gi|255297414|gb|EET76729.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
tuberculostearicum SK141]
Length = 362
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 49/138 (35%), Gaps = 21/138 (15%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + L KE + ++L E LE+ Y+ E
Sbjct: 232 LRDKAVHGYYSGYKYQRGLESTTPLRQKEMHDFTISLLEELYALELDYSGELYE---PLG 288
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVI-----DLKKEKNFFETR 112
++++ AN+ +G F E NP E++ + +FF
Sbjct: 289 LMDDVAVFVRYNANKALMNLGYPDYFPPEETEVNP-----EILAALAPGADENHDFFSGS 343
Query: 113 VTEYQQGAELK-----WD 125
+ Y G + WD
Sbjct: 344 GSSYVIGTAEETSDDDWD 361
>gi|16761590|ref|NP_457207.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|29143070|ref|NP_806412.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|213052490|ref|ZP_03345368.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213424576|ref|ZP_03357365.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
gi|213584527|ref|ZP_03366353.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
gi|213650063|ref|ZP_03380116.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|289824437|ref|ZP_06544026.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|25330821|pir||AH0841 ribonucleoside-diphosphate reductase (EC 1.17.4.1) - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16503891|emb|CAD05919.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
enterica subsp. enterica serovar Typhi]
gi|29138703|gb|AAO70272.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
Length = 319
Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E EI Y G
Sbjct: 189 IRDEAVHGYYIGYKHQIALQKLSAIEREELKLFALDLLMELYDNEICYTEALY--AETGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 247 VND-VKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKTVE 311
>gi|227833718|ref|YP_002835425.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
aurimucosum ATCC 700975]
gi|227454734|gb|ACP33487.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
aurimucosum ATCC 700975]
Length = 341
Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 49/138 (35%), Gaps = 21/138 (15%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + L KE + ++L E LE+ Y+ E
Sbjct: 211 LRDKAVHGYYSGYKYQRGLESTTPLRQKEMHDFTISLLEELYALELDYSGELYE---PLG 267
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVI-----DLKKEKNFFETR 112
++++ AN+ +G F E NP E++ + +FF
Sbjct: 268 LMDDVAVFVRYNANKALMNLGYPDYFPPEETEVNP-----EILAALAPGADENHDFFSGS 322
Query: 113 VTEYQQGAELK-----WD 125
+ Y G + WD
Sbjct: 323 GSSYVIGTAEETSDDDWD 340
>gi|319440834|ref|ZP_07989990.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
variabile DSM 44702]
Length = 316
Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 44/127 (34%), Gaps = 12/127 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE +H + + + + +L + E AY +G
Sbjct: 186 IRDEVVHGYYIGYKYQVGMAGWSSAEQQAIKDEVFDLLLDLYDNECAYTETLY--DELGW 243
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
++++++ AN+ + +G E +F E +S I + +FF +
Sbjct: 244 T-EDVKRFLRYNANKALNNLGYEGVFPQDECR---VSPAILASLDPGANENHDFFSGSGS 299
Query: 115 EYQQGAE 121
Y G
Sbjct: 300 AYTIGTA 306
>gi|323341317|ref|ZP_08081561.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
ruminis ATCC 25644]
gi|323091194|gb|EFZ33822.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
ruminis ATCC 25644]
Length = 317
Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 10/131 (7%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + ++ + + +L++ E Y HE +G
Sbjct: 188 LRDESVHGTYIGYKFQIRYRALAEEEQEKLKFEIVNLLYDLYQNEEKYTHELY--DELGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
++++ AN+ +G EPLF+ T NP M+ + +FF Y
Sbjct: 246 T-EDVGIFLRYNANKALMNLGFEPLFEETATDVNPVV-MNGISTSTSNHDFFSQVGNGYL 303
Query: 118 QGAE---LKWD 125
G+ D
Sbjct: 304 LGSVEAMGDDD 314
>gi|311741268|ref|ZP_07715092.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
pseudogenitalium ATCC 33035]
gi|311303438|gb|EFQ79517.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 341
Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 49/138 (35%), Gaps = 21/138 (15%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + L KE + ++L E LE+ Y+ E
Sbjct: 211 LRDKAVHGYYSGYKYQRGLESTTPLRQKEMHDFTISLLEELYALELDYSGELYE---PLG 267
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVI-----DLKKEKNFFETR 112
++++ AN+ +G F E NP E++ + +FF
Sbjct: 268 LMDDVAVFVRYNANKALMNLGYPDYFPPEETEVNP-----EILAALAPGADENHDFFSGS 322
Query: 113 VTEYQQGAELK-----WD 125
+ Y G + WD
Sbjct: 323 GSSYVIGTAEETSDDDWD 340
>gi|313892092|ref|ZP_07825688.1| ribonucleoside-diphosphate reductase, beta subunit [Dialister
microaerophilus UPII 345-E]
gi|329121529|ref|ZP_08250153.1| ribonucleotide-diphosphate reductase subunit beta [Dialister
micraerophilus DSM 19965]
gi|313119484|gb|EFR42680.1| ribonucleoside-diphosphate reductase, beta subunit [Dialister
microaerophilus UPII 345-E]
gi|327469444|gb|EGF14914.1| ribonucleotide-diphosphate reductase subunit beta [Dialister
micraerophilus DSM 19965]
Length = 338
Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 44/133 (33%), Gaps = 11/133 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + Q + E ++ ++ E LE Y + +
Sbjct: 208 LRDKVIHNYYSGYKYQQKIAKENDARKAEMKKFVFDLMEEEIELEKIYLRDLYKGFDI-- 265
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVID--LKKEKNFFETRVTEYQ 117
A ++ + A + +G + F E P + + + +FF + Y
Sbjct: 266 -ADDAIRFSVYNAGKFLQNLGYDSPFSEEETHIAPEVFAQLSARADENHDFFSGSGSSYV 324
Query: 118 QGAELK-----WD 125
G + WD
Sbjct: 325 IGTTEETTDEDWD 337
>gi|324525159|gb|ADY48515.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
Length = 240
Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 7/43 (16%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL 44
RDE LH +F + IK K Q++ ++ EA L
Sbjct: 205 RDEGLHRDFACLLYKYIK-------HKPSQEQVYEIIKEAVSL 240
>gi|213023521|ref|ZP_03337968.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 256
Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E EI Y G
Sbjct: 126 IRDEAVHGYYIGYKHQIALQKLSAIEREELKLFALDLLMELYDNEICYTEALY--AETGW 183
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 184 VND-VKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENHDFFSGSGSSYV 242
Query: 118 QGAELK 123
G ++
Sbjct: 243 MGKTVE 248
>gi|26553540|ref|NP_757474.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
penetrans HF-2]
gi|26453546|dbj|BAC43878.1| ribonucleotide diphosphate reductase subunit beta [Mycoplasma
penetrans HF-2]
Length = 339
Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 45/128 (35%), Gaps = 6/128 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + + P E ++ +L++ LE + +E +
Sbjct: 209 LRDKVIHNYYSGYKYQKKVAKLPPEKQAEMKKFVFDLLYQVIDLEKEFLNELYAGFNI-- 266
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
A ++ + A + +G + F E ++ + +FF + Y
Sbjct: 267 -ADQAIKFSVYNAGKFLQNLGYDSPFTPEETEIKPEIFVQLSARADENHDFFSGSGSSYI 325
Query: 118 QGAELKWD 125
G + D
Sbjct: 326 MGNVEETD 333
>gi|81428551|ref|YP_395551.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
sakei subsp. sakei 23K]
gi|78610193|emb|CAI55242.1| Ribonucleoside-diphosphate reductase, beta chain [Lactobacillus
sakei subsp. sakei 23K]
Length = 318
Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E +E Q +L++ E Y HE G
Sbjct: 188 IRDESVHGTYIGYKFQLGFNELAKAEQEELQNWMYDLLYDLYANEEKYTHEVY--DGTGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
Y+++ AN+ +G LF T NP ++ + +FF
Sbjct: 246 TEEVL-TYLRYNANKALMNLGQGALFPDTAEDVNPVV-LNGMSTSTANHDFF 295
>gi|293556439|ref|ZP_06675017.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium E1039]
gi|291601403|gb|EFF31677.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium E1039]
Length = 316
Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 42/125 (33%), Gaps = 8/125 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + Q E EF T L+E E AY E
Sbjct: 186 IRDESVHGTYLGYKFRQDFEELTLEEKDEFTNWMYTFLNELLKNEFAYTEE---VYSEIG 242
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK----YTENPFPWMSEVIDLKKEKNFFETRVTEY 116
+ ++++ AN+ +G F+ NP M+ + +FF Y
Sbjct: 243 LVEDIKTFVKYNANKSLQNMGFGIYFEDALVNDVNPIV-MNGISIETANHDFFSQVGAGY 301
Query: 117 QQGAE 121
G
Sbjct: 302 LMGGA 306
>gi|260578497|ref|ZP_05846410.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
[Corynebacterium jeikeium ATCC 43734]
gi|258603378|gb|EEW16642.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
[Corynebacterium jeikeium ATCC 43734]
Length = 338
Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 51/138 (36%), Gaps = 19/138 (13%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + +P + E ++ + ++ E LE Y+ +
Sbjct: 204 LRDKAVHGYYSGYKFQRGLEAHPE-RSAELEEFTFALVEELLELEKEYSGDLYGGTLPDE 262
Query: 61 NA--PSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVI-----DLKKEKNFFE 110
+ ++ + A++ +G P ++ P E+I D + +FF
Sbjct: 263 KSLIDGVMAFVHYNADKALMNLGYPPQYEEEAAKTEP-----EIIAALAPDSNETHDFFS 317
Query: 111 TRVTEYQQG---AELKWD 125
+ Y G + + D
Sbjct: 318 GSGSSYVIGRAESTEEDD 335
>gi|28377561|ref|NP_784453.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
plantarum WCFS1]
gi|254555734|ref|YP_003062151.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
plantarum JDM1]
gi|300769755|ref|ZP_07079637.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308179714|ref|YP_003923842.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
plantarum subsp. plantarum ST-III]
gi|28270393|emb|CAD63296.1| ribonucleoside-diphosphate reductase, beta chain [Lactobacillus
plantarum WCFS1]
gi|254044661|gb|ACT61454.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
plantarum JDM1]
gi|300492663|gb|EFK27849.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308045205|gb|ADN97748.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
plantarum subsp. plantarum ST-III]
Length = 336
Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 7/112 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + EF+ L++ E Y H +G
Sbjct: 202 LRDESVHGTYIGYKFQLGFKDRSEKQQAEFKDWMFDFLYKLYENEENYIHLVY--DQIGW 259
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
+ + ++ AN+ +G + LF T NP M+ + +FF
Sbjct: 260 SDEVL-TFSRYNANKALMNLGQDALFPDTAEDVNPVV-MNGISTGTSNHDFF 309
>gi|68535290|ref|YP_249995.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
jeikeium K411]
gi|68262889|emb|CAI36377.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
jeikeium K411]
Length = 338
Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 53/138 (38%), Gaps = 19/138 (13%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + +P + E ++ + T++ E LE Y+ + +
Sbjct: 204 LRDKAVHGYYSGYKFQRGLEAHPE-RSAELEEFTFTLVEELLELEKEYSGDLYGETLPDE 262
Query: 61 NA--PSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVI-----DLKKEKNFFE 110
+ ++ + A++ +G P ++ P E+I D + +FF
Sbjct: 263 KSLIDGVMAFVHYNADKALMNLGYPPQYEEEAAKTEP-----EIIAALAPDSNETHDFFS 317
Query: 111 TRVTEYQQG---AELKWD 125
+ Y G + + D
Sbjct: 318 GSGSSYVIGRAESTEEDD 335
>gi|171779436|ref|ZP_02920400.1| hypothetical protein STRINF_01281 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282053|gb|EDT47484.1| hypothetical protein STRINF_01281 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 316
Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 44/132 (33%), Gaps = 11/132 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + Q E + F + L E E AY E
Sbjct: 186 IRDESVHGTYLGYKFRQDFNELAITEQENFTNWMYSFLEELLDNEFAYTEE---VYSEIG 242
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEKNFFETRVTEY 116
+ ++++ AN+ +G + FK NP M+ + +FF Y
Sbjct: 243 LVEDIKTFVKYNANKSLQNMGFDIYFKDASANDVNPIV-MNGISIETANHDFFSQVGAGY 301
Query: 117 QQGAE---LKWD 125
G L D
Sbjct: 302 LMGEAEEMLDDD 313
>gi|82545243|ref|YP_409190.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
Sb227]
gi|81246654|gb|ABB67362.1| ribonucleoside-diphosphate reductase 2, beta chain, frag [Shigella
boydii Sb227]
gi|320186462|gb|EFW61190.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
flexneri CDC 796-83]
gi|332091953|gb|EGI97031.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
boydii 3594-74]
Length = 304
Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 6/112 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E E+ Y+ E +
Sbjct: 189 IRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYSDELYAETPW-- 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 109
A + ++ + AN+ +G EPLF NP + + + +FF
Sbjct: 247 -ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFF 297
>gi|293572347|ref|ZP_06683339.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium E980]
gi|291607581|gb|EFF36911.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
faecium E980]
Length = 316
Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 44/132 (33%), Gaps = 11/132 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + Q E + + + L E E AY E
Sbjct: 186 IRDESVHGTYLGYKFRQDFNELSITEQENYTNWMYSFLEELLDNEFAYTEE---VYSEIG 242
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEKNFFETRVTEY 116
+ ++++ AN+ +G + FK NP M+ + +FF Y
Sbjct: 243 LVEDIKTFVKYNANKSLQNMGFDIYFKDASANDVNPIV-MNGISIETANHDFFSQVGAGY 301
Query: 117 QQGAE---LKWD 125
G L D
Sbjct: 302 LMGEAEEMLDDD 313
>gi|197294249|ref|YP_001798790.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
Phytoplasma australiense]
gi|171853576|emb|CAM11447.1| Ribonucleotide reductase, beta subunit [Candidatus Phytoplasma
australiense]
Length = 344
Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 45/120 (37%), Gaps = 6/120 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + ++ KE + + ++ E +
Sbjct: 216 IRDESIHGVYIGRLATELYHLFDDDTKKELKTWLDATMKTLYKEQMELVKEVY--SKLSY 273
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
++++++ AN+ +G + F NP + ++ + + + F + YQ+
Sbjct: 274 LEEDVQKFVRYNANKALMNLGFDAFFPEENVNPV--VLNGLNTETKTMDNFSMKGNGYQK 331
>gi|262184725|ref|ZP_06044146.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
aurimucosum ATCC 700975]
Length = 306
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 49/138 (35%), Gaps = 21/138 (15%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + L KE + ++L E LE+ Y+ E
Sbjct: 176 LRDKAVHGYYSGYKYQRGLESTTPLRQKEMHDFTISLLEELYALELDYSGELYE---PLG 232
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVI-----DLKKEKNFFETR 112
++++ AN+ +G F E NP E++ + +FF
Sbjct: 233 LMDDVAVFVRYNANKALMNLGYPDYFPPEETEVNP-----EILAALAPGADENHDFFSGS 287
Query: 113 VTEYQQGAELK-----WD 125
+ Y G + WD
Sbjct: 288 GSSYVIGTAEETSDDDWD 305
>gi|319440691|ref|ZP_07989847.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
variabile DSM 44702]
Length = 335
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 21/138 (15%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + +P E + + E LE Y+ + G L
Sbjct: 205 LRDKAVHGYYSGYKYQRGLDAHPE-RVAEMEDFTYRFTAELLALENEYSRDLYSLGS--L 261
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVI-----DLKKEKNFFETR 112
+ + ++ + A++ +G P ++ P E+I D + +FF
Sbjct: 262 DYAGVDAFVHYNADKALMNLGYGPQYEDAAAGVEP-----EIIAALTPDSSETHDFFSGS 316
Query: 113 VTEYQQG-----AELKWD 125
+ Y G E WD
Sbjct: 317 GSSYVMGRAEVTEEDDWD 334
>gi|289810170|ref|ZP_06540799.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 215
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E EI Y G
Sbjct: 85 IRDEAVHGYYIGYKHQIALQKLSAIEREELKLFALDLLMELYDNEICYTEALY--AETGW 142
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 143 VND-VKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENHDFFSGSGSSYV 201
Query: 118 QGAELK 123
G ++
Sbjct: 202 MGKTVE 207
>gi|213612975|ref|ZP_03370801.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
Length = 205
Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + + +E + + +L E EI Y G
Sbjct: 75 IRDEAVHGYYIGYKHQIALQKLSAIEREELKLFALDLLMELYDNEICYTEALY--AETGW 132
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E LF NP + + + +FF + Y
Sbjct: 133 VND-VKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENHDFFSGSGSSYV 191
Query: 118 QGAELK 123
G ++
Sbjct: 192 MGKTVE 197
>gi|39938541|ref|NP_950307.1| ribonucleotide-diphosphate reductase subunit beta [Onion yellows
phytoplasma OY-M]
gi|39721650|dbj|BAD04140.1| ribonucleotide reductase beta subunit [Onion yellows phytoplasma
OY-M]
Length = 350
Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 46/120 (38%), Gaps = 7/120 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + +I + + ++ + + + H K +
Sbjct: 223 IRDESIHGVYVGRLATEIYQLFDKPTQQTLKTWLDDLMQQLYQAQTSLVHAIYHKLNL-- 280
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
+++++ AN+ +G + F NP + ++ + + + F + YQ+
Sbjct: 281 -EDDVNKFVRYNANKALMNLGFDAFFPSENVNPV--IINGLNTETKTMDNFSMKGNGYQK 337
>gi|260904664|ref|ZP_05912986.1| ribonucleoside-diphosphate reductase beta chain [Brevibacterium
linens BL2]
Length = 341
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 51/138 (36%), Gaps = 21/138 (15%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + +E ++ + +L + LE+AY+ E
Sbjct: 211 LRDKAVHGYYSGYKYQRGIENQTSARQEEMREFTYELLEDLYELELAYSGELYE---PLG 267
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVI-----DLKKEKNFFETR 112
++++ AN+ +G F E NP E++ + +FF
Sbjct: 268 LMDDVAVFVRYNANKALMNLGYPARFNSDETQVNP-----EILAALAPGADENHDFFSGS 322
Query: 113 VTEYQQG-----AELKWD 125
+ Y G ++ WD
Sbjct: 323 GSSYVIGKGEDTSDDDWD 340
>gi|172039808|ref|YP_001799522.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
urealyticum DSM 7109]
gi|171851112|emb|CAQ04088.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
urealyticum DSM 7109]
Length = 334
Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 51/124 (41%), Gaps = 11/124 (8%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + +P E + +L E LE+ Y+ E GL
Sbjct: 205 LRDKAVHGYYSGYKFQRGIERHPE-RAAELSDFTHELLEELYQLELEYSTELYE--PFGL 261
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID-----LKKEKNFFETRVTE 115
A E+++++ AN+ +G P++ +E E++ + +FF +
Sbjct: 262 MAD-VERFVKYNANKALMNLGYTPIYPGSETSVS--PEILSALTPGADENHDFFSGSGSS 318
Query: 116 YQQG 119
Y G
Sbjct: 319 YIIG 322
>gi|85057306|ref|YP_456222.1| ribonucleotide-diphosphate reductase subunit beta [Aster yellows
witches'-broom phytoplasma AYWB]
gi|84789411|gb|ABC65143.1| ribonucleoside-diphosphate reductase beta chain [Aster yellows
witches'-broom phytoplasma AYWB]
Length = 350
Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 46/120 (38%), Gaps = 7/120 (5%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + + ++ + + ++ + + + + K +
Sbjct: 223 IRDESIHGVYVGRLATELYQLFDKPTKQTLKTWLDDLMQQLYQTKTSLVNAIYHKLNL-- 280
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
+++++ AN+ +G + F NP + ++ + + + F + YQ+
Sbjct: 281 -EDDVNKFVRYNANKALMNLGFDAFFPSENVNPV--IINGLNTETKTMDNFSMKGNGYQK 337
>gi|304373441|ref|YP_003856650.1| Ribonucleoside-diphosphate reductase beta chai [Mycoplasma
hyorhinis HUB-1]
gi|304309632|gb|ADM22112.1| Ribonucleoside-diphosphate reductase beta chai [Mycoplasma
hyorhinis HUB-1]
gi|330723642|gb|AEC46012.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
hyorhinis MCLD]
Length = 344
Score = 38.4 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 46/122 (37%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + + P +E ++ +L+E LE Y +E + +
Sbjct: 214 LRDKVIHNYYSGYKYQKKVEKLPLKKQEEMKKFVFDLLYELIDLEKTYLNELYSEVGL-- 271
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVID--LKKEKNFFETRVTEYQ 117
A ++ + A + +G + F E P + + + +FF + Y
Sbjct: 272 -AEEAIKFSVYNAGKFLQNLGYDSPFTEEETRIEPEIFNQLSARADENHDFFSGNGSSYV 330
Query: 118 QG 119
G
Sbjct: 331 MG 332
>gi|300859142|ref|YP_003784125.1| ribonucleoside-diphosphate reductase subunit beta [Corynebacterium
pseudotuberculosis FRC41]
gi|300686596|gb|ADK29518.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
pseudotuberculosis FRC41]
gi|302206836|gb|ADL11178.1| Ribonucleoside-diphosphate reductase subunit beta [Corynebacterium
pseudotuberculosis C231]
gi|302331398|gb|ADL21592.1| Ribonucleoside-diphosphate reductase beta chain 2 [Corynebacterium
pseudotuberculosis 1002]
gi|308277088|gb|ADO26987.1| Ribonucleoside-diphosphate reductase beta chain 2 [Corynebacterium
pseudotuberculosis I19]
Length = 340
Score = 38.4 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 49/142 (34%), Gaps = 23/142 (16%)
Query: 1 MRDESLHLNFGIDVINQI------KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP 54
+RD+++H + + + + +T F + + + ++ + +T+
Sbjct: 204 LRDKAVHGYYSGYKYQRGLDAKPQRKDEMEDFTYSFCDELLAL-EKDYSADLYASVDTLE 262
Query: 55 KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL------KKEKNF 108
+ + ++ + A++ +G P ++ +S I + +F
Sbjct: 263 EPRPTI--DGVMAFVYYNADKALMNLGYAPAYELQA---AHVSPEIIAALTPESNETHDF 317
Query: 109 FETRVTEYQQG-----AELKWD 125
F + Y G E WD
Sbjct: 318 FSGSGSSYIIGRAENTTESDWD 339
>gi|241895721|ref|ZP_04783017.1| ribonucleotide-diphosphate reductase subunit beta [Weissella
paramesenteroides ATCC 33313]
gi|241871088|gb|EER74839.1| ribonucleotide-diphosphate reductase subunit beta [Weissella
paramesenteroides ATCC 33313]
Length = 318
Score = 38.0 bits (87), Expect = 0.40, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 9/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDES+H + E E + +L + E Y +G
Sbjct: 188 LRDESVHGTYIGYKFQLGFNELSTDEQNELKTWLYDLLLDLYGNEEKYTKLLY--DEIGW 245
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
S ++++ AN+ +G +PLF NP M+ + +FF Y+
Sbjct: 246 T-ESVLTFLRYNANKALMNLGQDPLFPDGAEDVNPIV-MNGISTTTSNHDFFSQVGNGYR 303
Query: 118 QGA--ELKWD 125
G ++ D
Sbjct: 304 LGQVEAMEDD 313
>gi|297243045|ref|ZP_06926983.1| ribonucleotide reductase, beta subunit [Gardnerella vaginalis AMD]
gi|296889256|gb|EFH27990.1| ribonucleotide reductase, beta subunit [Gardnerella vaginalis AMD]
Length = 364
Score = 38.0 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 47/128 (36%), Gaps = 6/128 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + K ++ + +L LE+ Y+ +
Sbjct: 234 LRDKAIHGYYSGYKFQRGLELRSENDKKNLEKFTMNLLDTLYDLEVEYSGQIYEGFDFHD 293
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQ 117
+ ++++ AN+ +G + + + P + + + +FF + Y
Sbjct: 294 DVFD---FVRYNANKALMNLGYPAKYSEEETHVSPEILAALSPAADENHDFFSGSGSSYI 350
Query: 118 QGAELKWD 125
G ++ D
Sbjct: 351 MGKSVETD 358
>gi|195549699|gb|ACG50073.1| NrdB [uncultured virus]
Length = 46
Score = 38.0 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 91 NPFPWMSEVIDLKKEKNF-FETRVTEYQQGAELKW 124
NP PW I K + ET V Y G +
Sbjct: 1 NPLPWTEHWISSKGLQVAPQETEVESYIVGGIKQD 35
>gi|221309908|ref|ZP_03591755.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
subtilis subsp. subtilis str. 168]
gi|221314231|ref|ZP_03596036.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
subtilis subsp. subtilis str. NCIB 3610]
gi|221319154|ref|ZP_03600448.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
subtilis subsp. subtilis str. JH642]
gi|221323427|ref|ZP_03604721.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
subtilis subsp. subtilis str. SMY]
Length = 123
Score = 37.6 bits (86), Expect = 0.50, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 47/111 (42%), Gaps = 7/111 (6%)
Query: 13 DVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI 72
+ +I + KE + +L E E+ Y + AP ++++++
Sbjct: 1 MLAQEIYKKQTPQKQKELYAWALNLLQELYENELEYTED---VYDQVGLAPDVKKFIRYN 57
Query: 73 ANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQGAE 121
AN+ + +G + F+ + NP + ++ K + +FF T+ Y++
Sbjct: 58 ANKALNNLGFDHWFEEEDVNPI--VINGLNTKTKSHDFFSTKGNGYKKATV 106
>gi|308235083|ref|ZP_07665820.1| ribonucleoside-diphosphate reductase, beta subunit [Gardnerella
vaginalis ATCC 14018]
gi|311115217|ref|YP_003986438.1| ribonucleotide-diphosphate reductase subunit beta [Gardnerella
vaginalis ATCC 14019]
gi|310946711|gb|ADP39415.1| ribonucleotide-diphosphate reductase subunit beta [Gardnerella
vaginalis ATCC 14019]
Length = 364
Score = 37.6 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 46/131 (35%), Gaps = 12/131 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + K ++ + +L LE+ Y+ +
Sbjct: 234 LRDKAIHGYYSGYKFQRGLELRSENDKKNLEKFTMNLLDTLYDLEVEYSGQIYEGFDFHD 293
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEKNFFETRVT 114
+ ++++ AN+ +G + E +S I + +FF +
Sbjct: 294 DVFD---FVRYNANKALMNLGYPAKYSEEE---THVSPEILAALSPAADENHDFFSGSGS 347
Query: 115 EYQQGAELKWD 125
Y G ++ D
Sbjct: 348 SYIMGKSVETD 358
>gi|283782686|ref|YP_003373440.1| ribonucleoside-diphosphate reductase, beta subunit [Gardnerella
vaginalis 409-05]
gi|283441437|gb|ADB13903.1| ribonucleoside-diphosphate reductase, beta subunit [Gardnerella
vaginalis 409-05]
Length = 359
Score = 37.6 bits (86), Expect = 0.52, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 47/128 (36%), Gaps = 6/128 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + K ++ + +L LE+ Y+ +
Sbjct: 229 LRDKAIHGYYSGYKFQRGLELRSENDKKNLEKFTMNLLDTLYDLEVEYSGQIYEGFDFHD 288
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQ 117
+ ++++ AN+ +G + + + P + + + +FF + Y
Sbjct: 289 DVFD---FVRYNANKALMNLGYPAKYSEEETHVSPEILAALSPAADENHDFFSGSGSSYI 345
Query: 118 QGAELKWD 125
G ++ D
Sbjct: 346 MGKSVETD 353
>gi|296086891|emb|CBI33064.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 37.6 bits (86), Expect = 0.53, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 26/101 (25%), Gaps = 11/101 (10%)
Query: 2 RDESLHLNFGIDVINQ---------IKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 52
RDE LH +F + + E L+ + + +A +L
Sbjct: 35 RDEGLHCDFACLLYKNRKPQSFCFSLMFETKLLFLQCHNGHTLCSSCKARVLNKCPTCRQ 94
Query: 53 MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF 93
L + ++ + G + Y
Sbjct: 95 QVGDIRCLALEKMAKSLELHCKN--EEFGCFEIIPYHTKLM 133
>gi|156843271|ref|XP_001644704.1| hypothetical protein Kpol_1056p47 [Vanderwaltozyma polyspora DSM
70294]
gi|156115352|gb|EDO16846.1| hypothetical protein Kpol_1056p47 [Vanderwaltozyma polyspora DSM
70294]
Length = 361
Score = 37.6 bits (86), Expect = 0.54, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 37/95 (38%), Gaps = 9/95 (9%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY-AHETMPKGFVG 59
++D +H +F + + +++K ++ EA +E+ + K
Sbjct: 233 LKDHIVHCDFQMSIYSELKKRLD-------PGIIERIVTEAVEIELETLEDDYFNKQLDK 285
Query: 60 LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP 94
+ ++++ +R G + F ++ NP+
Sbjct: 286 ETKADIKNVIEYVGDRVLMGFGNQKHF-HSANPYD 319
>gi|195549697|gb|ACG50072.1| NrdB [uncultured virus]
Length = 46
Score = 37.6 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 91 NPFPWMSEVIDLKKEKNF-FETRVTEYQQGAELKW 124
NP PW I K + ET V Y G +
Sbjct: 1 NPLPWTEHWISSKGLQVAPQETEVESYIVGGIKQD 35
>gi|57867410|ref|YP_189075.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
epidermidis RP62A]
gi|57638068|gb|AAW54856.1| ribonucleoside-diphosphate reductase 2, beta subunit
[Staphylococcus epidermidis RP62A]
Length = 340
Score = 37.6 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 34/122 (27%), Gaps = 13/122 (10%)
Query: 3 DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
DE++H + + ++ E KE + +
Sbjct: 200 DETIHGSGTGYAAQVIFDKFSKEEQEDIRKELMELFDQLYFNEVE-------YAASLYDK 252
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+Y+Q+ NR +G E +F NP D +FF + Y
Sbjct: 253 LGLTEDVIRYIQYNGNRALMNLGWETVFNPEPFNPIVENGLRTDTTNH-DFFSVKGDGYT 311
Query: 118 QG 119
Sbjct: 312 LA 313
>gi|298253146|ref|ZP_06976938.1| ribonucleotide reductase, beta subunit [Gardnerella vaginalis 5-1]
gi|297532541|gb|EFH71427.1| ribonucleotide reductase, beta subunit [Gardnerella vaginalis 5-1]
Length = 331
Score = 37.6 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 47/128 (36%), Gaps = 6/128 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + K ++ + +L LE+ Y+ +
Sbjct: 201 LRDKAIHGYYSGYKFQRGLELRSENDKKNLEKFTMNLLDTLYDLEVEYSGQIYEGFDFHD 260
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEKNFFETRVTEYQ 117
+ ++++ AN+ +G + + + P + + + +FF + Y
Sbjct: 261 DVFD---FVRYNANKALMNLGYPAKYSEEETHVSPEILAALSPAADENHDFFSGSGSSYI 317
Query: 118 QGAELKWD 125
G ++ D
Sbjct: 318 MGKSVETD 325
>gi|300934659|ref|ZP_07149915.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
resistens DSM 45100]
Length = 332
Score = 37.6 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 52/135 (38%), Gaps = 16/135 (11%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + +P T E + + +L + LE+ Y+ E
Sbjct: 203 LRDKAVHGYYSGYKFQRGLENHPE-RTAELSEFTHALLEKLFELEVLYSAELYE---PLG 258
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID-----LKKEKNFFETRVTE 115
P +++++ AN+ +G P F E E++ + +FF +
Sbjct: 259 LMPDVVKFVKYNANKALMNLGYHPHFAAEETDVS--PEILSALTPGADENHDFFSGSGSS 316
Query: 116 YQQG-----AELKWD 125
Y G A+ WD
Sbjct: 317 YIMGKAEETADTDWD 331
>gi|269941513|emb|CBI49911.1| ribonucleoside-diphosphate reductase subunit [Staphylococcus aureus
subsp. aureus TW20]
Length = 340
Score = 37.2 bits (85), Expect = 0.66, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 33/122 (27%), Gaps = 13/122 (10%)
Query: 3 DESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 58
DE++H + + + E KE + +
Sbjct: 200 DETIHGSGTGYAAQVIFEKFSKEEQEDIRKELMELFDQLYFNEVE-------YAASLYDK 252
Query: 59 GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+Y+Q+ NR +G E +F NP D +FF + Y
Sbjct: 253 LGLTEDVIRYIQYNGNRALMNLGWETVFNPEPFNPIVENGLRTDTTNH-DFFSVKGDGYT 311
Query: 118 QG 119
Sbjct: 312 LA 313
>gi|242069239|ref|XP_002449896.1| hypothetical protein SORBIDRAFT_05g025245 [Sorghum bicolor]
gi|241935739|gb|EES08884.1| hypothetical protein SORBIDRAFT_05g025245 [Sorghum bicolor]
Length = 79
Score = 36.9 bits (84), Expect = 0.86, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 26 WTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPL 85
K + + ++ EA +E + + + +N QY+ FIA+ + + +
Sbjct: 2 HNKLDESRVSEIIIEAIDIEREFICNALVR----MNGRLMSQYIGFIADYLLMALEHKKM 57
Query: 86 FKYTENPFPWMSEVIDLKKE 105
+ NPF WM E+I L+ +
Sbjct: 58 YDVA-NPFDWM-ELISLQGK 75
>gi|284931055|gb|ADC30993.1| Ribonucleoside-diphosphate reductase subunit beta [Mycoplasma
gallisepticum str. F]
Length = 339
Score = 36.9 bits (84), Expect = 0.88, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 42/122 (34%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + P +E+++ +L + LE + E GL
Sbjct: 209 LRDKVIHNYYSGYKYRLKVQKLPKEKQEEYKKFVFEILDKLIELEKDFLRELY--DGFGL 266
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVID--LKKEKNFFETRVTEYQ 117
+ + + A + G E F E P + + + +FF + Y
Sbjct: 267 ADEAIA-FSLYNAGKFLQNCGYESPFTPEETKISPEVFAQLSARADENHDFFSGNGSSYI 325
Query: 118 QG 119
G
Sbjct: 326 MG 327
>gi|329296713|ref|ZP_08254049.1| ribonucleoside-diphosphate reductase [Plautia stali symbiont]
Length = 319
Score = 36.9 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RDE++H + + E QQ + +L A E + VG
Sbjct: 189 IRDEAVHGYYIGYKYQKALETVDDARRAELQQFAIELLL-ALYENEVVYTEAL-YADVGW 246
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + AN+ +G E L NP + + + +FF + Y
Sbjct: 247 T-EEVKTFLHYNANKALMNLGYEALSPAELTAVNPAILSALSPNADENHDFFSGSGSSYV 305
Query: 118 QGAELK 123
G ++
Sbjct: 306 MGKAVE 311
>gi|89885959|ref|YP_516157.1| hypothetical protein Rfer_4473 [Rhodoferax ferrireducens T118]
gi|89347957|gb|ABD72159.1| hypothetical protein Rfer_4473 [Rhodoferax ferrireducens T118]
Length = 321
Score = 36.9 bits (84), Expect = 0.97, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 20/85 (23%)
Query: 24 HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE 83
H + + A+ + ++M+F Q
Sbjct: 100 HFTFLVPMEVLCQINDYGQRFRNAWEERALDWREKLGLPDWMSEWMEFCNTSLRAQFHNL 159
Query: 84 PLFKYTENPFPWMSEVIDLKKEKNF 108
P + PWM + K F
Sbjct: 160 PQYNNWRETLPWMMSLGSGKGRSKF 184
>gi|50365347|ref|YP_053772.1| ribonucleotide-diphosphate reductase subunit beta [Mesoplasma
florum L1]
gi|50363903|gb|AAT75888.1| ribonucleoside-diphosphate reductase beta chain [Mesoplasma florum
L1]
Length = 340
Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + + E ++ +L+E LE AY E +
Sbjct: 210 LRDKVIHNYYSGYKYQKKVAKLSPEKQAEMKEFVFKLLYELIDLEKAYLKELYEDFGL-- 267
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
A ++ + A + +G + F E + + +FF + Y
Sbjct: 268 -ADDAIRFSVYNAGKFLQNLGYDSPFTEEETRIEPEIFTQLSARADENHDFFSGNGSSYI 326
Query: 118 QG--AELKWD 125
G E + D
Sbjct: 327 MGVSEETEDD 336
>gi|323354474|gb|EGA86313.1| Rnr2p [Saccharomyces cerevisiae VL3]
Length = 306
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 2 RDESLHLNFGIDVINQIKIE-NPHLWTKEFQ 31
RDE LH +F + +K + +P + K
Sbjct: 271 RDEGLHTDFACLLFAHLKNKPDPAIVXKNCH 301
>gi|31544249|ref|NP_852827.1| ribonucleoside-diphosphate reductase subunit beta [Mycoplasma
gallisepticum str. R(low)]
gi|26398734|sp|Q9XC20|RIR2_MYCGA RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
AltName: Full=Ribonucleotide reductase small subunit
gi|5565932|gb|AAD45275.1|AF152114_3 ribonucleoside-diphosphate reductase beta chain [Mycoplasma
gallisepticum]
gi|31541093|gb|AAP56395.1| Ribonucleoside-diphosphate reductase subunit beta [Mycoplasma
gallisepticum str. R(low)]
gi|284930288|gb|ADC30227.1| Ribonucleoside-diphosphate reductase subunit beta [Mycoplasma
gallisepticum str. R(high)]
Length = 339
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 43/122 (35%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + P +E+++ +L++ LE + E GL
Sbjct: 209 LRDKVIHNYYSGYKYRLKVQKLPKEKQEEYKKFVFEILYKLIELEKDFLRELY--DGFGL 266
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVID--LKKEKNFFETRVTEYQ 117
+ + + A + G E F E P + + + +FF + Y
Sbjct: 267 ADEAIA-FSLYNAGKFLQNCGYESPFTPEETKISPEVFAQLSARADENHDFFSGNGSSYI 325
Query: 118 QG 119
G
Sbjct: 326 MG 327
>gi|330971158|gb|EGH71224.1| hypothetical protein PSYAR_11719 [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 25
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 17/21 (80%), Positives = 19/21 (90%)
Query: 90 ENPFPWMSEVIDLKKEKNFFE 110
NPFPWMSE+I LKKE+NFFE
Sbjct: 1 TNPFPWMSEIIALKKERNFFE 21
>gi|323333040|gb|EGA74442.1| Rnr2p [Saccharomyces cerevisiae AWRI796]
Length = 306
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 2 RDESLHLNFGIDVINQIKIE-NPHLWTKEFQ 31
RDE LH +F + +K + +P + K
Sbjct: 271 RDEGLHTDFACLLFAHLKNKPDPAIVEKNCH 301
>gi|308233466|ref|ZP_07664203.1| ribonucleotide-diphosphate reductase subunit beta [Atopobium
vaginae DSM 15829]
gi|328943412|ref|ZP_08240877.1| ribonucleotide-diphosphate reductase subunit beta [Atopobium
vaginae DSM 15829]
gi|327491381|gb|EGF23155.1| ribonucleotide-diphosphate reductase subunit beta [Atopobium
vaginae DSM 15829]
Length = 339
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 42/124 (33%), Gaps = 6/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + Q + + + ++++ LE AY + +
Sbjct: 209 LRDKVIHNYYSGYKFQQKVRKLTSDEQQTVKDFVFDLMYQLIDLEKAYLQDLYKDFDL-- 266
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A ++ + A + +G + F E +P + + +FF + Y
Sbjct: 267 -ADDAIRFSLYNAGKFLQNLGYDSPFSEQETYISPEVFAQLSARADENHDFFSGSGSSYV 325
Query: 118 QGAE 121
G
Sbjct: 326 IGTS 329
>gi|284167352|ref|YP_003405630.1| ribonucleotide reductase [Haloterrigena turkmenica DSM 5511]
gi|284017007|gb|ADB62957.1| ribonucleotide reductase [Haloterrigena turkmenica DSM 5511]
Length = 296
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 6/83 (7%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 61
RDE H++FG+ + ++ + + + E L + + G +G +
Sbjct: 216 RDEGRHVSFGVTKVRKLVDK------GVDPETIVETIDELVPLVETTIDQMVRDGSIGAD 269
Query: 62 APSCEQYMQFIANRRCHQIGLEP 84
+ +RR Q+G+ P
Sbjct: 270 RNGILNRIDTARDRRLEQVGVVP 292
>gi|189490606|ref|YP_001957176.1| hypothetical ribonucleotide reductase beta subunit [Pseudomonas
phage 201phi2-1]
gi|164609671|gb|ABY63280.1| hypothetical ribonucleotide reductase beta subunit [Pseudomonas
phage 201phi2-1]
Length = 386
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 24/137 (17%)
Query: 3 DES-LHLNFGIDVINQIKI-ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM--PKGFV 58
DE +H FG +VI + E + ++ + + + E + E+ + +
Sbjct: 233 DEYEIHAQFGQEVIKALLKTERGLIAYEDTKAECIKLFWEILMSEVNWLIYLFSEGRELP 292
Query: 59 GLNAPSCEQYMQFIAN---------------RRCHQI---GLEPLFKYTENPFPWMSEVI 100
G+ Q++ F N R + G E F +NP P+M E +
Sbjct: 293 GVTLKKMVQWVLFNCNAAGTFTGHKDGITDEMRAEFLATTGFELEFP-DKNPLPYMVEYL 351
Query: 101 D-LKKEKNFFETRVTEY 116
D + E + Y
Sbjct: 352 DLGANQSAAQEVDLNSY 368
>gi|15829010|ref|NP_326370.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
pulmonis UAB CTIP]
gi|14089954|emb|CAC13712.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN (RIBONUCLEOTIDE
REDUCTASE) [Mycoplasma pulmonis]
Length = 341
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 43/122 (35%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + + KE ++ +L++ LE Y +E + +
Sbjct: 211 LRDKVIHNYYSGYKYQKKVEKLSLEKQKEMKEFVFDLLYKLIDLEKKYLYELYEEIGL-- 268
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
A ++ + A + +G + F E + + +FF + Y
Sbjct: 269 -AEDAIKFSLYNAGKFLQNLGYDSPFTSEETKIDAEIFSQLSARADENHDFFSGNGSSYV 327
Query: 118 QG 119
G
Sbjct: 328 MG 329
>gi|13508061|ref|NP_110010.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
pneumoniae M129]
gi|2500211|sp|P75461|RIR2_MYCPN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
AltName: Full=Ribonucleotide reductase small subunit
gi|1674208|gb|AAB96162.1| ribonucleoside-diphosphate reductase beta chain [Mycoplasma
pneumoniae M129]
gi|301633274|gb|ADK86828.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
pneumoniae FH]
Length = 339
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 42/122 (34%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + + E ++ +++E LE AY E +
Sbjct: 209 LRDKVIHNYYSGYKFQRKVEKMSKEKQAEMKRFVFDLMYELIELEKAYLKELYEGFGIVE 268
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
+A ++ + A + +G + F E + + +FF + Y
Sbjct: 269 DA---IKFSIYNAGKFLQNLGYDSPFTEEETRIKPEIFAQLSARADENHDFFSGNGSSYV 325
Query: 118 QG 119
G
Sbjct: 326 MG 327
>gi|12045084|ref|NP_072895.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
genitalium G37]
gi|255660230|ref|ZP_05405639.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
genitalium G37]
gi|1350602|sp|P47471|RIR2_MYCGE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
AltName: Full=Ribonucleotide reductase small subunit
gi|3844832|gb|AAC71450.1| ribonucleoside-diphosphate reductase, beta chain [Mycoplasma
genitalium G37]
gi|166078981|gb|ABY79599.1| ribonucleoside-diphosphate reductase, beta chain [synthetic
Mycoplasma genitalium JCVI-1.0]
Length = 340
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 43/130 (33%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + + P KE + +++ LE Y E G+
Sbjct: 210 LRDKVIHNYYSGYKYQRKLEKLPLAKQKEMKAFVFELMYRLIELEKDYLKELYEG--FGI 267
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
+ ++ + A + +G + F E + + +FF + Y
Sbjct: 268 VDDAI-KFSVYNAGKFLQNLGYDSPFTAAETRIKPEIFAQLSARADENHDFFSGNGSSYV 326
Query: 118 QG--AELKWD 125
G E D
Sbjct: 327 MGVSEETNDD 336
>gi|300362837|ref|ZP_07059008.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
gasseri JV-V03]
gi|300353073|gb|EFJ68950.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
gasseri JV-V03]
Length = 275
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + E ++ L + LE Y HE +
Sbjct: 145 LRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYLHELYDDFDL-- 202
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ + A + +G + F E +P + + +FF + Y
Sbjct: 203 -VDDAIHFSLYNAGKFLQNLGYDSPFTAEETYISPEVFAQLSAQADENHDFFSGNGSSYV 261
Query: 118 QGA--ELKWD 125
G E K D
Sbjct: 262 MGTGEETKDD 271
>gi|224107525|ref|XP_002314510.1| predicted protein [Populus trichocarpa]
gi|222863550|gb|EEF00681.1| predicted protein [Populus trichocarpa]
Length = 1130
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 37/117 (31%), Gaps = 17/117 (14%)
Query: 11 GIDVINQIKIENPHLWTKEFQQKSRTM-LHEATLLEIAYAHETMPKGFVGLNAPSCEQYM 69
+++ I P + + + EA +E + + + +
Sbjct: 423 TCKLMSNITCSIPEFTCVSSAKLVKLLEQKEANHIEFCRIKNVLDEILFMYRNSELNEIL 482
Query: 70 QFIANRRCHQIGLEPLFKYTENPFPW----MSEVIDLKKEKN------------FFE 110
+ + + GL+ F+ N W +SE+I L E + FFE
Sbjct: 483 KSLMDPAWMATGLKIDFETLVNECEWASGRISEMISLDGESDQKISSCPVVPSEFFE 539
>gi|328464295|gb|EGF35725.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
helveticus MTCC 5463]
Length = 335
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + E ++ L + LE Y HE +
Sbjct: 205 LRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYLHELYGDFDL-- 262
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ + A + +G + F E +P + + +FF + Y
Sbjct: 263 -VDDAIHFSLYNAGKFLQNLGYDSPFTAEETYVSPEVFAQLSAQADENHDFFSGNGSSYV 321
Query: 118 QGA--ELKWD 125
G E K D
Sbjct: 322 MGTGEETKDD 331
>gi|260102934|ref|ZP_05753171.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus helveticus
DSM 20075]
gi|111610216|gb|ABH11600.1| ribonucleoside-diphosphate reductase 2 alpha subunit [Lactobacillus
helveticus CNRZ32]
gi|260083260|gb|EEW67380.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus helveticus
DSM 20075]
Length = 340
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + E ++ L + LE Y HE +
Sbjct: 210 LRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYLHELYGDFDL-- 267
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ + A + +G + F E +P + + +FF + Y
Sbjct: 268 -VDDAIHFSLYNAGKFLQNLGYDSPFTAEETYVSPEVFAQLSAQADENHDFFSGNGSSYV 326
Query: 118 QGA--ELKWD 125
G E K D
Sbjct: 327 MGTGEETKDD 336
>gi|161508077|ref|YP_001578044.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
helveticus DPC 4571]
gi|160349066|gb|ABX27740.1| ribonucleoside-diphosphate reductase [Lactobacillus helveticus DPC
4571]
Length = 340
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + E ++ L + LE Y HE +
Sbjct: 210 LRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYLHELYGDFDL-- 267
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ + A + +G + F E +P + + +FF + Y
Sbjct: 268 -VDDAIHFSLYNAGKFLQNLGYDSPFTAEETYISPEVFAQLSAQADENHDFFSGNGSSYV 326
Query: 118 QGA--ELKWD 125
G E K D
Sbjct: 327 MGTGEETKDD 336
>gi|555172|gb|AAA46037.1| herpesvirus saimiri gene 60 homologue (aa 177 to 258); putative
[Bovine herpesvirus 4]
Length = 82
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 15/47 (31%), Gaps = 4/47 (8%)
Query: 2 RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 48
RDE LH + N + K + EA +E +
Sbjct: 13 RDELLHTRAAALLYNTMVSG----ADKPHMLWVHNLFKEAVEVEHEF 55
>gi|331703804|ref|YP_004400491.1| ribonucleoside diphosphate reductase 2 betachain [Mycoplasma
mycoides subsp. capri LC str. 95010]
gi|256383837|gb|ACU78407.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
mycoides subsp. capri str. GM12]
gi|256384668|gb|ACU79237.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
mycoides subsp. capri str. GM12]
gi|296455270|gb|ADH21505.1| ribonucleoside-diphosphate reductase, beta subunit [synthetic
Mycoplasma mycoides JCVI-syn1.0]
gi|328802359|emb|CBW54513.1| Ribonucleoside diphosphate reductase 2 betachain [Mycoplasma
mycoides subsp. capri LC str. 95010]
Length = 339
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + + P E ++ +L+E LE AY E +
Sbjct: 209 LRDKVIHNYYSGYKYQKKVAKLPVEKQAEMKEFVFKLLYELIDLETAYLKELYAGFDI-- 266
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVID--LKKEKNFFETRVTEYQ 117
++ + A + +G + F E P + + + +FF + Y
Sbjct: 267 -VDDAIRFSVYNAGKFLQNLGYDSPFSEEETRIEPEIFNQLSARADENHDFFSGNGSSYV 325
Query: 118 QGAELK 123
G ++
Sbjct: 326 MGVSVE 331
>gi|328710829|ref|XP_003244373.1| PREDICTED: hypothetical protein LOC100575936 [Acyrthosiphon pisum]
Length = 66
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Query: 68 YMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR--VTEY 116
Y+ A+R ++G + +PF E+ + + NFFE R T Y
Sbjct: 10 YIGDFADRLLKELGFQQFTGRQTHPF---MELTPQQGKTNFFERRLSNTNY 57
>gi|42561374|ref|NP_975825.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
mycoides subsp. mycoides SC str. PG1]
gi|42492872|emb|CAE77467.1| ribonucleoside-diphosphate reductase 2 beta chain [Mycoplasma
mycoides subsp. mycoides SC str. PG1]
gi|301321363|gb|ADK70006.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
mycoides subsp. mycoides SC str. Gladysdale]
Length = 339
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + + P E ++ +L+E LE AY E +
Sbjct: 209 LRDKVIHNYYSGYKYQKKVAKLPVEKQTEMKEFVFKLLYELIDLETAYLKELYAGFDI-- 266
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVID--LKKEKNFFETRVTEYQ 117
++ + A + +G + F E P + + + +FF + Y
Sbjct: 267 -VDDAIRFSVYNAGKFLQNLGYDSPFSEEETRIEPEIFNQLSARADENHDFFSGNGSSYV 325
Query: 118 QGAELK 123
G ++
Sbjct: 326 MGVSVE 331
>gi|323476430|gb|ADX81668.1| ribonucleotide reductase [Sulfolobus islandicus HVE10/4]
Length = 308
Score = 34.9 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 25/79 (31%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES H+ FGI +I ++ E K + A + + L
Sbjct: 209 DESRHIAFGIYLITRLVKEYGEGVYKTAMDHINYLAPYAIGIFSEPTMPQVESLPFNLTN 268
Query: 63 PSCEQYMQFIANRRCHQIG 81
Y + + N R I
Sbjct: 269 IELVDYAKKLLNTRIDAIN 287
>gi|323473782|gb|ADX84388.1| ribonucleotide reductase [Sulfolobus islandicus REY15A]
Length = 308
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 25/79 (31%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES H+ FGI +I ++ E K + A + + L
Sbjct: 209 DESRHIAFGIYLITRLVKEYGEGVYKTAMDHINYLAPYAIGIFSEPTMPQVESLPFNLTN 268
Query: 63 PSCEQYMQFIANRRCHQIG 81
Y + + N R I
Sbjct: 269 IELVDYAKKLLNTRIDAIN 287
>gi|238618784|ref|YP_002913609.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
islandicus M.16.4]
gi|238379853|gb|ACR40941.1| ribonucleotide reductase [Sulfolobus islandicus M.16.4]
Length = 308
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 25/79 (31%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES H+ FGI +I ++ E K + A + + L
Sbjct: 209 DESRHIAFGIYLITRLVKEYGEGVYKAAMDHINYLAPYAIGIFSEPTMPQVESLPFNLTN 268
Query: 63 PSCEQYMQFIANRRCHQIG 81
Y + + N R I
Sbjct: 269 IELVDYAKKLLNTRIDAIN 287
>gi|15899238|ref|NP_343843.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
solfataricus P2]
gi|227829337|ref|YP_002831116.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
islandicus L.S.2.15]
gi|229578110|ref|YP_002836508.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
islandicus Y.G.57.14]
gi|229583322|ref|YP_002841721.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
islandicus Y.N.15.51]
gi|284996696|ref|YP_003418463.1| ribonucleotide reductase [Sulfolobus islandicus L.D.8.5]
gi|13815800|gb|AAK42633.1| Ribonuleotide reductase small subunit, probable (nrdB) [Sulfolobus
solfataricus P2]
gi|227455784|gb|ACP34471.1| ribonucleotide reductase [Sulfolobus islandicus L.S.2.15]
gi|228008824|gb|ACP44586.1| ribonucleotide reductase [Sulfolobus islandicus Y.G.57.14]
gi|228014038|gb|ACP49799.1| ribonucleotide reductase [Sulfolobus islandicus Y.N.15.51]
gi|284444591|gb|ADB86093.1| ribonucleotide reductase [Sulfolobus islandicus L.D.8.5]
Length = 308
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 25/79 (31%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES H+ FGI +I ++ E K + A + + L
Sbjct: 209 DESRHIAFGIYLITRLVKEYGEGVYKAAMDHINYLAPYAIGIFSEPTMPQVESLPFNLTN 268
Query: 63 PSCEQYMQFIANRRCHQIG 81
Y + + N R I
Sbjct: 269 IELVDYAKKLLNTRIDAIN 287
>gi|303232548|ref|ZP_07319234.1| ribonucleoside-diphosphate reductase, beta subunit [Atopobium
vaginae PB189-T1-4]
gi|302481335|gb|EFL44409.1| ribonucleoside-diphosphate reductase, beta subunit [Atopobium
vaginae PB189-T1-4]
Length = 351
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 38/124 (30%), Gaps = 6/124 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + Q ++ +L+ LE Y E +
Sbjct: 221 LRDKVIHNYYSGYKYQQKLKRLAADEQAAMKEFVFDLLYHLIDLEKTYLRELYDGFDL-- 278
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDL--KKEKNFFETRVTEYQ 117
A + + A + +G + F E P + + + +FF + Y
Sbjct: 279 -ADDAIAFSLYNAGKFLQNLGYDSPFTAQETHIEPEVFAQLSARADENHDFFSGSGSSYV 337
Query: 118 QGAE 121
G
Sbjct: 338 IGTA 341
>gi|227826697|ref|YP_002828476.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
islandicus M.14.25]
gi|229583861|ref|YP_002842362.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
islandicus M.16.27]
gi|227458492|gb|ACP37178.1| ribonucleotide reductase [Sulfolobus islandicus M.14.25]
gi|228018910|gb|ACP54317.1| ribonucleotide reductase [Sulfolobus islandicus M.16.27]
Length = 308
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 25/79 (31%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES H+ FGI +I ++ E K + A + + L
Sbjct: 209 DESRHIAFGIYLITRLVKEYGEGVYKAAMDHINYLAPYAIGIFSEPTMPQVESLPFNLTN 268
Query: 63 PSCEQYMQFIANRRCHQIG 81
Y + + N R I
Sbjct: 269 IELVDYAKKLLNTRIDAIN 287
>gi|294155961|ref|YP_003560345.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
crocodyli MP145]
gi|291600208|gb|ADE19704.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
crocodyli MP145]
Length = 340
Score = 34.9 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 38/122 (31%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + + E ++ +L+ E + + +
Sbjct: 210 LRDKVIHNYYSGYKYQKKVAKLSDKRKAELKEFVFELLYRLIDAEKKFLTKLYEGFDL-- 267
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
A ++ + A + +G + F E + + +FF + Y
Sbjct: 268 -AEDAIRFSVYNAGKFLQNLGYDSPFTDEETRIEPEIFAQLSARADENHDFFSGNGSSYV 326
Query: 118 QG 119
G
Sbjct: 327 MG 328
>gi|213585578|ref|ZP_03367404.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 189
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 2 RDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIAY 48
RDE+LHL ++N ++ ++P + +E +Q+ + +A E +
Sbjct: 137 RDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEW 187
>gi|298245511|ref|ZP_06969317.1| SpoVR family protein [Ktedonobacter racemifer DSM 44963]
gi|297552992|gb|EFH86857.1| SpoVR family protein [Ktedonobacter racemifer DSM 44963]
Length = 890
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 38/120 (31%), Gaps = 30/120 (25%)
Query: 25 LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQ----- 79
+ + ++ R + A + + + P F + A ++ + R
Sbjct: 4 IESNRDLERLRDSIEGAWEIAHEFGLDPFPTHFELVPAAIMYEFASYGLPGRFSHWTHGK 63
Query: 80 ----------IGLEPLFKY--TENP-FPWMSEVIDLK----------KEKNFFETRVTEY 116
+GL +++ NP + ++ E+ D+ +FF + Y
Sbjct: 64 AYYRQKMQYDLGLSKIYEMVVNTNPSYAFLMEMNDMLQNTFVAAHVFGHTDFF--KNNAY 121
>gi|238852996|ref|ZP_04643394.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
gasseri 202-4]
gi|282851729|ref|ZP_06261093.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
gasseri 224-1]
gi|238834391|gb|EEQ26630.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
gasseri 202-4]
gi|282557132|gb|EFB62730.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
gasseri 224-1]
Length = 335
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + E ++ L + LE Y HE +
Sbjct: 205 LRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYLHELYDDFDL-- 262
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ + A + +G + F E +P + + +FF + Y
Sbjct: 263 -VDDAIHFSLYNAGKFLQNLGYDSPFTAEETYVSPEVFAQLSAQADENHDFFSGNGSSYV 321
Query: 118 QGA--ELKWD 125
G E K D
Sbjct: 322 MGTGEETKDD 331
>gi|83319806|ref|YP_424093.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
capricolum subsp. capricolum ATCC 27343]
gi|83283692|gb|ABC01624.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
capricolum subsp. capricolum ATCC 27343]
Length = 339
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + + E ++ +L+E LE AY E +
Sbjct: 209 LRDKVIHNYYSGYKYQKKVAKLSVEKQAEMKEFVFKLLYELIDLETAYLKELYAGFDI-- 266
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVID--LKKEKNFFETRVTEYQ 117
A ++ + A + +G + F E P + + + +FF + Y
Sbjct: 267 -ADDAIRFSVYNAGKFLQNLGYDSPFSEEETRIEPEIFNQLSARADENHDFFSGNGSSYV 325
Query: 118 QGAELK 123
G ++
Sbjct: 326 MGVSVE 331
>gi|300362830|ref|ZP_07059004.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
gasseri JV-V03]
gi|300353120|gb|EFJ68994.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
gasseri JV-V03]
Length = 340
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + E ++ L + LE Y HE +
Sbjct: 210 LRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYLHELYDDFDL-- 267
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ + A + +G + F E +P + + +FF + Y
Sbjct: 268 -VDDAIHFSLYNAGKFLQNLGYDSPFTAEETYISPEVFAQLSAQADENHDFFSGNGSSYV 326
Query: 118 QGA--ELKWD 125
G E K D
Sbjct: 327 MGTGEETKDD 336
>gi|256849455|ref|ZP_05554887.1| ribonucleoside-diphosphate reductase 2 alpha subunit [Lactobacillus
crispatus MV-1A-US]
gi|262046124|ref|ZP_06019087.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
crispatus MV-3A-US]
gi|256713571|gb|EEU28560.1| ribonucleoside-diphosphate reductase 2 alpha subunit [Lactobacillus
crispatus MV-1A-US]
gi|260573454|gb|EEX30011.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
crispatus MV-3A-US]
Length = 335
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + E ++ L + LE Y HE +
Sbjct: 205 LRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYLHELYDDFDL-- 262
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ + A + +G + F E +P + + +FF + Y
Sbjct: 263 -VDDAIHFSLYNAGKFLQNLGYDSPFTAEETYVSPEVFAQLSAQADENHDFFSGNGSSYV 321
Query: 118 QGA--ELKWD 125
G E K D
Sbjct: 322 MGTGEETKDD 331
>gi|240047145|ref|YP_002960533.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
conjunctivae HRC/581]
gi|239984717|emb|CAT04689.1| Ribonucleoside-diphosphate reductase beta chai [Mycoplasma
conjunctivae]
Length = 344
Score = 34.5 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 42/122 (34%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + + +E + +L++ LE Y +E + +
Sbjct: 214 LRDKVIHNYYSGYKYQRKVEKLSPEKQQEMKDFVFDLLYKLIDLEKEYLYELYEEVDLAE 273
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVID--LKKEKNFFETRVTEYQ 117
A + A + +G + F E P + + + +FF + Y
Sbjct: 274 PAIRFSV---YNAGKFLQNLGYDSPFSEEETRIEPEIFNQLSARADENHDFFSGNGSSYV 330
Query: 118 QG 119
G
Sbjct: 331 MG 332
>gi|139474322|ref|YP_001129038.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes str. Manfredo]
gi|134272569|emb|CAM30835.1| ribonucleoside-diphosphate reductase beta subunit [Streptococcus
pyogenes str. Manfredo]
Length = 337
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + Q E + +L+E LE AY E +
Sbjct: 207 LRDKVIHNYYSGYKYQQKVARLSPEKQAEMKAFVFDLLYELIDLEKAYLRELYAGFDL-- 264
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVID--LKKEKNFFETRVTEYQ 117
A ++ + A + +G + F E P + + + +FF + Y
Sbjct: 265 -AEDAIRFSLYNAGKFLQNLGYDSPFTDEETRISPEVFAQLSARADENHDFFSGNGSSYV 323
Query: 118 QG 119
G
Sbjct: 324 MG 325
>gi|71903000|ref|YP_279803.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes MGAS6180]
gi|71802095|gb|AAX71448.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
pyogenes MGAS6180]
Length = 337
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + Q E + +L+E LE AY E +
Sbjct: 207 LRDKVIHNYYSGYKYQQKVARLSPEKQAEMKAFVFDLLYELIDLEKAYLRELYAGFDL-- 264
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVID--LKKEKNFFETRVTEYQ 117
A ++ + A + +G + F E P + + + +FF + Y
Sbjct: 265 -AEDAIRFSLYNAGKFLQNLGYDSPFTDEETRISPEVFAQLSARADENHDFFSGNGSSYV 323
Query: 118 QG 119
G
Sbjct: 324 MG 325
>gi|312984313|ref|ZP_07791656.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
crispatus CTV-05]
gi|310894278|gb|EFQ43357.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
crispatus CTV-05]
Length = 335
Score = 34.5 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + E ++ L + LE Y HE +
Sbjct: 205 LRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYLHELYDDFDL-- 262
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ + A + +G + F E +P + + +FF + Y
Sbjct: 263 -VDDAIHFSLYNAGKFLQNLGYDTPFTAEETYISPEVFAQLSAQADENHDFFSGNGSSYV 321
Query: 118 QGA--ELKWD 125
G E K D
Sbjct: 322 MGTGEETKDD 331
>gi|308178758|ref|YP_003918164.1| ribonucleoside-diphosphate reductase subunit beta [Arthrobacter
arilaitensis Re117]
gi|307746221|emb|CBT77193.1| ribonucleoside-diphosphate reductase beta chain [Arthrobacter
arilaitensis Re117]
Length = 341
Score = 34.5 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 49/138 (35%), Gaps = 21/138 (15%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + + ++ + +L E LE+ Y+ E
Sbjct: 211 LRDKAVHGYYSGYKYQRGLETQSPATQENMREFTYALLEELYELELQYSGELYE---PLG 267
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVI-----DLKKEKNFFETR 112
++++ AN+ +G F E NP E++ + +FF
Sbjct: 268 LMDDVAVFVRYNANKALMNLGYPARFTPEETNVNP-----EILAALAPGADENHDFFSGS 322
Query: 113 VTEYQQG-----AELKWD 125
+ Y G ++ WD
Sbjct: 323 GSSYIIGKAEDTSDDDWD 340
>gi|19745563|ref|NP_606699.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes MGAS8232]
gi|19747686|gb|AAL97198.1| putative ribonucleotide reductase 2 [Streptococcus pyogenes
MGAS8232]
Length = 337
Score = 34.5 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + Q E + +L+E LE AY E +
Sbjct: 207 LRDKVIHNYYSGYKYQQKVARLSPEKQAEMKAFVFDLLYELIDLEKAYLRELYAGFDL-- 264
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVID--LKKEKNFFETRVTEYQ 117
A ++ + A + +G + F E P + + + +FF + Y
Sbjct: 265 -AEDAIRFSLYNAGKFLQNLGYDSPFTEEETRISPEVFAQLSARADENHDFFSGNGSSYV 323
Query: 118 QG 119
G
Sbjct: 324 MG 325
>gi|10957415|ref|NP_051641.1| ribonucleotide-diphosphate reductase subunit beta [Deinococcus
radiodurans R1]
gi|6460844|gb|AAF12548.1|AE001826_17 ribonucleoside-diphosphate reductase, beta chain [Deinococcus
radiodurans R1]
Length = 354
Score = 34.5 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 41/118 (34%), Gaps = 7/118 (5%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DE+LH + + + + Q L E+AY + VGL
Sbjct: 217 DEALHGVYVALLAQEKFATMNAAEQADAQAWFDDTLQALYSNELAYTEQLY--ANVGLTG 274
Query: 63 PSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQ 118
+++++F N + L F NP + I + +FF + + Y +
Sbjct: 275 E-VKKFIRFNFNVLADNLALPRPFGDEDINPI--VQNGIQARGTTHDFFSAKGSSYSK 329
>gi|293380788|ref|ZP_06626833.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
crispatus 214-1]
gi|290922652|gb|EFD99609.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
crispatus 214-1]
Length = 335
Score = 34.2 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 9/131 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + E ++ L + LE Y HE +
Sbjct: 205 LRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYLHELYDDFDL-- 262
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ + A + +G + F E +P + + +FF + Y
Sbjct: 263 -VDDAIHFSLYNAGKFLQNLGYDSPFTAEETYVSPEVFAQLSAQADENHDFFSGNGSSYV 321
Query: 118 QGA---ELKWD 125
G D
Sbjct: 322 MGTGEETTDDD 332
>gi|307104534|gb|EFN52787.1| hypothetical protein CHLNCDRAFT_10712 [Chlorella variabilis]
Length = 214
Score = 34.2 bits (77), Expect = 6.3, Method: Composition-based stats.
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 2 RDESLHLNFGIDVINQIKI 20
RDE LH +F + ++
Sbjct: 195 RDEGLHTDFACHLYELLQN 213
>gi|237784654|ref|YP_002905359.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
kroppenstedtii DSM 44385]
gi|237757566|gb|ACR16816.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
kroppenstedtii DSM 44385]
Length = 350
Score = 34.2 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 48/148 (32%), Gaps = 25/148 (16%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + +P + Q+ + +++ E LE Y+ E
Sbjct: 204 LRDKAVHGYYSGYKFQRGLDAHPERKNE-LQEFTYSLVDELLNLEKIYSGELYGGITAPN 262
Query: 61 NAPS--------------CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK--- 103
N+ ++ + AN+ +G L++ + L
Sbjct: 263 NSHKSAESSFTSRPNFAGVMAFVYYNANKALMNLGYPALYEDEAERTE-PDILAALTPEA 321
Query: 104 -KEKNFFETRVTEYQQG-----AELKWD 125
+ +FF Y G E WD
Sbjct: 322 SETHDFFSGSGASYVIGKTEATEESDWD 349
>gi|313665031|ref|YP_004046902.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
leachii PG50]
gi|312949985|gb|ADR24581.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
leachii PG50]
Length = 339
Score = 34.2 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 44/126 (34%), Gaps = 6/126 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + + E ++ +L+E LE Y E +
Sbjct: 209 LRDKVIHNYYSGYKYQKKVAKLSVEKQAEMKEFVFKLLYELIDLETDYLKELYAGFDI-- 266
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVID--LKKEKNFFETRVTEYQ 117
A ++ + A + +G + F E P + + + +FF + Y
Sbjct: 267 -ADDAIRFSVYNAGKFLQNLGYDSPFSEEETRIEPEIFNQLSARADENHDFFSGNGSSYV 325
Query: 118 QGAELK 123
G ++
Sbjct: 326 MGVSVE 331
>gi|227878534|ref|ZP_03996468.1| ribonucleoside-diphosphate reductase [Lactobacillus crispatus
JV-V01]
gi|227861868|gb|EEJ69453.1| ribonucleoside-diphosphate reductase [Lactobacillus crispatus
JV-V01]
Length = 352
Score = 34.2 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 9/131 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + E ++ L + LE Y HE +
Sbjct: 222 LRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYLHELYDDFDL-- 279
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ + A + +G + F E +P + + +FF + Y
Sbjct: 280 -VDDAIHFSLYNAGKFLQNLGYDSPFTAEETYVSPEVFAQLSAQADENHDFFSGNGSSYV 338
Query: 118 QGA---ELKWD 125
G D
Sbjct: 339 MGTGEETTDDD 349
>gi|209558898|ref|YP_002285370.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes NZ131]
gi|209540099|gb|ACI60675.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
[Streptococcus pyogenes NZ131]
Length = 337
Score = 34.2 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + Q E + +L+E LE AY E +
Sbjct: 207 LRDKVIHNYYSGYKYQQKVARLSPEKQAEMKAFVFDLLYELIDLEKAYLRELYAGFDL-- 264
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A ++ + A + +G E F E +P + + +FF + Y
Sbjct: 265 -AEDAIRFSLYNAGKFLQNLGYESPFTDEETRVSPEVFAQLSARADENHDFFSGNGSSYV 323
Query: 118 QG 119
G
Sbjct: 324 MG 325
>gi|56807592|ref|ZP_00365501.1| COG0208: Ribonucleotide reductase, beta subunit [Streptococcus
pyogenes M49 591]
Length = 311
Score = 34.2 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + Q E + +L+E LE AY E +
Sbjct: 181 LRDKVIHNYYSGYKYQQKVARLSPEKQAEMKAFVFDLLYELIDLEKAYLRELYAGFDL-- 238
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A ++ + A + +G E F E +P + + +FF + Y
Sbjct: 239 -AEDAIRFSLYNAGKFLQNLGYESPFTDEETRVSPEVFAQLSARADENHDFFSGNGSSYV 297
Query: 118 QG 119
G
Sbjct: 298 MG 299
>gi|325269106|ref|ZP_08135726.1| hypothetical protein HMPREF9141_0935 [Prevotella multiformis DSM
16608]
gi|324988493|gb|EGC20456.1| hypothetical protein HMPREF9141_0935 [Prevotella multiformis DSM
16608]
Length = 472
Score = 34.2 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 19/56 (33%)
Query: 41 ATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 96
A + IA ++ L+ ++++ +G ++ PW+
Sbjct: 266 AFGIAIAIKCGSIDNFVKDLSMTPHHNFIEYAVAAAISAMGFATIYNIPYRLMPWI 321
>gi|323467364|gb|ADX71051.1| Ribonucleoside-diphosphate reductase 2 alpha subunit [Lactobacillus
helveticus H10]
Length = 340
Score = 34.2 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 8/130 (6%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + E ++ L + LE Y HE +
Sbjct: 210 LRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFNFLDKLIDLEKKYLHELYDDFDL-- 267
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
+ + A + +G + F E +P + + +FF + Y
Sbjct: 268 -VDDAIHFSLYNAGKFLQNLGYDSPFTAEETYISPEVFAQLSAQADENHDFFSGNGSSYV 326
Query: 118 QGA--ELKWD 125
G E K D
Sbjct: 327 MGTGEETKDD 336
>gi|327313460|ref|YP_004328897.1| hypothetical protein HMPREF9137_1201 [Prevotella denticola F0289]
gi|326944036|gb|AEA19921.1| putative membrane protein [Prevotella denticola F0289]
Length = 472
Score = 34.2 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 9/85 (10%), Positives = 28/85 (32%)
Query: 12 IDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQF 71
I+ +N + + + ++ A + IA ++ L+ ++++
Sbjct: 237 INAVNDLLDNHINTGLVRSMNTLLIVVSMAFGIAIAIKCGSIDNFVKDLSMTPHHNFIEY 296
Query: 72 IANRRCHQIGLEPLFKYTENPFPWM 96
+G ++ PW+
Sbjct: 297 AIAAAVSAMGFATIYNIPYRLMPWI 321
>gi|325860309|ref|ZP_08173431.1| putative membrane protein [Prevotella denticola CRIS 18C-A]
gi|325482188|gb|EGC85199.1| putative membrane protein [Prevotella denticola CRIS 18C-A]
Length = 472
Score = 34.2 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 9/85 (10%), Positives = 28/85 (32%)
Query: 12 IDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQF 71
I+ +N + + + ++ A + IA ++ L+ ++++
Sbjct: 237 INAVNDLLDNHINTGLVRSMNTLLIVVSMAFGIAIAIKCGSIDNFVKDLSMTPHHNFIEY 296
Query: 72 IANRRCHQIGLEPLFKYTENPFPWM 96
+G ++ PW+
Sbjct: 297 AIAAAVSAMGFATIYNIPYRLMPWI 321
>gi|15674552|ref|NP_268726.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes M1 GAS]
gi|71910160|ref|YP_281710.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes MGAS5005]
gi|94987981|ref|YP_596082.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes MGAS9429]
gi|94989855|ref|YP_597955.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes MGAS10270]
gi|94991863|ref|YP_599962.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes MGAS2096]
gi|13621658|gb|AAK33447.1| putative ribonucleotide reductase 2 [Streptococcus pyogenes M1 GAS]
gi|71852942|gb|AAZ50965.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
pyogenes MGAS5005]
gi|94541489|gb|ABF31538.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
pyogenes MGAS9429]
gi|94543363|gb|ABF33411.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
pyogenes MGAS10270]
gi|94545371|gb|ABF35418.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
pyogenes MGAS2096]
Length = 337
Score = 34.2 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + Q E + +L+E LE AY E +
Sbjct: 207 LRDKVIHNYYSGYKYQQKVARLSPEKQAEMKAFVFDLLYELIDLEKAYLRELYAGFDL-- 264
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A ++ + A + +G E F E +P + + +FF + Y
Sbjct: 265 -AEDAIRFSLYNAGKFLQNLGYESPFTDEETRVSPEVFAQLSARADENHDFFSGNGSSYV 323
Query: 118 QG 119
G
Sbjct: 324 MG 325
>gi|94993745|ref|YP_601843.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes MGAS10750]
gi|94547253|gb|ABF37299.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
pyogenes MGAS10750]
Length = 337
Score = 34.2 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + Q E + +L+E LE AY E +
Sbjct: 207 LRDKVIHNYYSGYKYQQKVARLSPEKQAEMKAFVFDLLYELIDLEKAYLRELYAGFDL-- 264
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A ++ + A + +G E F E +P + + +FF + Y
Sbjct: 265 -AEDAIRFSLYNAGKFLQNLGYESPFTEEETRVSPEVFAQLSARADENHDFFSGNGSSYV 323
Query: 118 QG 119
G
Sbjct: 324 MG 325
>gi|269976951|ref|ZP_06183925.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
mulieris 28-1]
gi|269934782|gb|EEZ91342.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
mulieris 28-1]
Length = 333
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 51/135 (37%), Gaps = 16/135 (11%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + +P E + + +L + LE+ Y+ E GL
Sbjct: 204 LRDKAVHGYYSGYKYQRGLDLHPE-RVAEMEDFTFQLLDDLYELELKYSGEIYE--PTGL 260
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI-----DLKKEKNFFETRVTE 115
++++ AN+ +G F E ++++ ++ +FF +
Sbjct: 261 -MDDVAVFVRYNANKAMMNLGYPTRFAPEETEVK--ADILAALAPGSEETHDFFSGSGSS 317
Query: 116 YQQGAE-----LKWD 125
Y G+ WD
Sbjct: 318 YVIGSAESTSDEDWD 332
>gi|306819415|ref|ZP_07453122.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
mulieris ATCC 35239]
gi|307701705|ref|ZP_07638721.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
mulieris FB024-16]
gi|304647707|gb|EFM45025.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
mulieris ATCC 35239]
gi|307613208|gb|EFN92461.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
mulieris FB024-16]
Length = 333
Score = 33.8 bits (76), Expect = 7.6, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 51/135 (37%), Gaps = 16/135 (11%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + +P E + + +L + LE+ Y+ E GL
Sbjct: 204 LRDKAVHGYYSGYKYQRGLDLHPE-RAAEMEDFTFQLLDDLYELELKYSGEIYE--PTGL 260
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI-----DLKKEKNFFETRVTE 115
++++ AN+ +G F E ++++ ++ +FF +
Sbjct: 261 -MDDVAVFVRYNANKAMMNLGYPTRFAPEETEVK--ADILAALAPGSEETHDFFSGSGSS 317
Query: 116 YQQGAE-----LKWD 125
Y G+ WD
Sbjct: 318 YVIGSAESTSDEDWD 332
>gi|302190764|ref|ZP_07267018.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
iners AB-1]
gi|309804064|ref|ZP_07698145.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners LactinV 11V1-d]
gi|309804878|ref|ZP_07698940.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners LactinV 09V1-c]
gi|309807870|ref|ZP_07701802.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners LactinV 01V1-a]
gi|309809732|ref|ZP_07703586.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners SPIN 2503V10-D]
gi|312871305|ref|ZP_07731403.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners LEAF 3008A-a]
gi|312872703|ref|ZP_07732768.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners LEAF 2062A-h1]
gi|312873302|ref|ZP_07733357.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners LEAF 2052A-d]
gi|312874885|ref|ZP_07734904.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners LEAF 2053A-b]
gi|315654122|ref|ZP_07907038.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
iners ATCC 55195]
gi|325912248|ref|ZP_08174645.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners UPII 143-D]
gi|325913678|ref|ZP_08176040.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners UPII 60-B]
gi|329919824|ref|ZP_08276775.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners SPIN 1401G]
gi|308163832|gb|EFO66098.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners LactinV 11V1-d]
gi|308165817|gb|EFO68038.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners LactinV 09V1-c]
gi|308168972|gb|EFO71058.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners LactinV 01V1-a]
gi|308169911|gb|EFO71950.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners SPIN 2503V10-D]
gi|311089630|gb|EFQ48055.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners LEAF 2053A-b]
gi|311091182|gb|EFQ49571.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners LEAF 2052A-d]
gi|311091745|gb|EFQ50124.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners LEAF 2062A-h1]
gi|311093319|gb|EFQ51665.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners LEAF 3008A-a]
gi|315488818|gb|EFU78464.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
iners ATCC 55195]
gi|325475907|gb|EGC79076.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners UPII 143-D]
gi|325477037|gb|EGC80187.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners UPII 60-B]
gi|328937171|gb|EGG33599.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
iners SPIN 1401G]
Length = 337
Score = 33.8 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 42/122 (34%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + Q + E + +L++ LE AY E +
Sbjct: 207 LRDKVIHNYYSGYKYQQKLAKLAPQRQAEMKDFVFALLYKLIDLEKAYLRELYKGFDI-- 264
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDL--KKEKNFFETRVTEYQ 117
A ++ + A + +G + F E P + + + +FF + Y
Sbjct: 265 -AEDAIRFSIYNAGKFLQNLGYDSPFTEAETHIAPEVLAQLSARADENHDFFSGNGSSYV 323
Query: 118 QG 119
G
Sbjct: 324 MG 325
>gi|32709417|gb|AAP86727.1| NrdB [Enterobacteria phage LZ2]
Length = 313
Score = 33.8 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 2 RDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK 55
RDE LHL +I Q+++ + +E +Q++ + E E +A
Sbjct: 249 RDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQEKDWAVHLFKD 306
>gi|227876139|ref|ZP_03994257.1| ribonucleoside-diphosphate reductase [Mobiluncus mulieris ATCC
35243]
gi|227843295|gb|EEJ53486.1| ribonucleoside-diphosphate reductase [Mobiluncus mulieris ATCC
35243]
Length = 333
Score = 33.8 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 51/135 (37%), Gaps = 16/135 (11%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+++H + + +P E + + +L + LE+ Y+ E GL
Sbjct: 204 LRDKAVHGYYSGYKYQRGLDLHPE-RAAEMEDFTFQLLDDLYELELKYSGEIYE--PTGL 260
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI-----DLKKEKNFFETRVTE 115
++++ AN+ +G F E ++++ ++ +FF +
Sbjct: 261 -MDDVAVFVRYNANKAMMNLGYPTRFAPEETEVK--ADILAALAPGSEETHDFFSGSGSS 317
Query: 116 YQQGAE-----LKWD 125
Y G+ WD
Sbjct: 318 YVIGSAESTSDEDWD 332
>gi|293363858|ref|ZP_06610594.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
alligatoris A21JP2]
gi|292552348|gb|EFF41122.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
alligatoris A21JP2]
Length = 340
Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 37/122 (30%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + + E + +L + + E + + +
Sbjct: 210 LRDKVIHNYYSGYKYQKKVARLSEARKAEMKTFVFELLDKLIVAEKKFLTKLYEGFDL-- 267
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEYQ 117
A ++ + A + +G + F E + + +FF + Y
Sbjct: 268 -ADDAIRFSVYNAGKFLQNLGYDSPFTEEETRIEPEIFAQLSARADENHDFFSGNGSSYV 326
Query: 118 QG 119
G
Sbjct: 327 MG 328
>gi|305665285|ref|YP_003861572.1| 2-oxoglutarate dehydrogenase, E1 component [Maribacter sp.
HTCC2170]
gi|88710040|gb|EAR02272.1| 2-oxoglutarate dehydrogenase, E1 component [Maribacter sp.
HTCC2170]
Length = 942
Score = 33.8 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 8/107 (7%)
Query: 4 ESLHLNF-GIDVINQIKIENPHLWTKEFQ-----QKSRTMLHEATLLEIAYAHETMP-KG 56
E LH F I +IN + HL+TK + T+ E L
Sbjct: 72 EKLHKEFQVIQLINGYRSR-GHLFTKTNPVRERRKYIPTLEIENFGLTKEDLETVFTAGE 130
Query: 57 FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK 103
+G+ + Q ++ + C IG+E ++ W+ I++
Sbjct: 131 IIGIGPKTLAQIIEHLQRIYCDAIGVEYMYIRKPELREWIQNWINVN 177
>gi|21909837|ref|NP_664105.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes MGAS315]
gi|28896468|ref|NP_802818.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes SSI-1]
gi|50913718|ref|YP_059690.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes MGAS10394]
gi|21904023|gb|AAM78908.1| putative ribonucleotide reductase 2 [Streptococcus pyogenes
MGAS315]
gi|28811719|dbj|BAC64651.1| putative ribonucleotide reductase 2 [Streptococcus pyogenes SSI-1]
gi|50902792|gb|AAT86507.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
pyogenes MGAS10394]
Length = 337
Score = 33.8 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + Q E + +L+E LE AY E +
Sbjct: 207 LRDKVIHNYYSGYKYQQKVARLSPEKQAEMKAFVFDLLYELIDLEKAYLRELYAGFDL-- 264
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A ++ + A + +G + F E +P + + +FF + Y
Sbjct: 265 -AEDAIRFSLYNAGKFLQNLGYDSPFTDEETRVSPEVFAQLSARADENHDFFSGNGSSYV 323
Query: 118 QG 119
G
Sbjct: 324 MG 325
>gi|306827912|ref|ZP_07461179.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes ATCC 10782]
gi|304429831|gb|EFM32873.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
pyogenes ATCC 10782]
Length = 337
Score = 33.8 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + Q + + +L+E LE AY E +
Sbjct: 207 LRDKVIHNYYSGYKYQQKVARLSPEKQAKMKAFVFDLLYELIDLEKAYLRELYAGFDL-- 264
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQ 117
A ++ + A + +G + F E +P + + +FF + Y
Sbjct: 265 -AEDAIRFSLYNAGKFLQNLGYDSPFTDEETRVSPEVFAQLSARADENHDFFSGNGSSYV 323
Query: 118 QG 119
G
Sbjct: 324 MG 325
>gi|259500785|ref|ZP_05743687.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus iners DSM
13335]
gi|259167479|gb|EEW51974.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus iners DSM
13335]
Length = 339
Score = 33.8 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 42/122 (34%), Gaps = 6/122 (4%)
Query: 1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60
+RD+ +H + Q + E + +L++ LE AY E +
Sbjct: 209 LRDKVIHNYYSGYKYQQKLAKLAPQRQAEMKDFVFALLYKLIDLEKAYLRELYKGFDI-- 266
Query: 61 NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDL--KKEKNFFETRVTEYQ 117
A ++ + A + +G + F E P + + + +FF + Y
Sbjct: 267 -AEDAIRFSIYNAGKFLQNLGYDSPFTEAETHIAPEVLAQLSARADENHDFFSGNGSSYV 325
Query: 118 QG 119
G
Sbjct: 326 MG 327
>gi|284174067|ref|ZP_06388036.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
solfataricus 98/2]
gi|261600997|gb|ACX90600.1| ribonucleotide reductase [Sulfolobus solfataricus 98/2]
Length = 308
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 26/79 (32%)
Query: 3 DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 62
DES H+ FG+ +I ++ E+ K + A + + L
Sbjct: 209 DESRHIAFGVYLIARLVKEHGEGIYKVAMDHINYLAPYAIGIFSEPTMPQVTNLPFDLTN 268
Query: 63 PSCEQYMQFIANRRCHQIG 81
Y + + N R I
Sbjct: 269 MELVDYAKKLLNTRIDAIN 287
Database: nr
Posted date: May 13, 2011 4:10 AM
Number of letters in database: 999,999,932
Number of sequences in database: 2,987,209
Database: /data/usr2/db/fasta/nr.01
Posted date: May 13, 2011 4:17 AM
Number of letters in database: 999,998,956
Number of sequences in database: 2,896,973
Database: /data/usr2/db/fasta/nr.02
Posted date: May 13, 2011 4:23 AM
Number of letters in database: 999,999,979
Number of sequences in database: 2,907,862
Database: /data/usr2/db/fasta/nr.03
Posted date: May 13, 2011 4:29 AM
Number of letters in database: 999,999,513
Number of sequences in database: 2,932,190
Database: /data/usr2/db/fasta/nr.04
Posted date: May 13, 2011 4:33 AM
Number of letters in database: 792,586,372
Number of sequences in database: 2,260,650
Lambda K H
0.314 0.145 0.480
Lambda K H
0.267 0.0443 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,046,221,027
Number of Sequences: 13984884
Number of extensions: 30321377
Number of successful extensions: 112203
Number of sequences better than 10.0: 2477
Number of HSP's better than 10.0 without gapping: 1746
Number of HSP's successfully gapped in prelim test: 731
Number of HSP's that attempted gapping in prelim test: 106296
Number of HSP's gapped (non-prelim): 3067
length of query: 125
length of database: 4,792,584,752
effective HSP length: 91
effective length of query: 34
effective length of database: 3,519,960,308
effective search space: 119678650472
effective search space used: 119678650472
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 76 (33.8 bits)