HHsearch alignment for GI: 254780137 and conserved domain: COG0169
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism].
Probab=94.93 E-value=0.084 Score=31.45 Aligned_cols=201 Identities=19% Similarity=0.320 Sum_probs=106.4
Q ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH-CCCCCEEEHHHCCCCHH---HHHHHHHHHH------HCCC
Q ss_conf 300100899998626985265423889889999999870-88846062220648015---7999999987------1894
Q gi|254780137|r 103 KPVMEGKAVLFKKFAGINVFDIEINAKDVDTMVSTIVAL-EPTFGGINLEDIKAPEC---FEVERILSQK------LKIP 172 (779)
Q Consensus 103 ~pvmeGK~~L~k~~agid~~~i~~~~~d~~e~i~~v~~~-~p~fg~i~lEDi~~p~~---f~i~~~l~~~------~~ip 172 (779)
T Consensus 21 SP~~H--n~~~~~-lGl~~~Y~a~~v~-~~~l~~~v~~~~~~g~~G~NV---TiP~Ke~~~~~lD~l~~~A~~iGAVNTl 93 (283)
T COG0169 21 SPRMH--NAAFRA-LGLDYVYLAFEVP-PEDLPEAVSGIRALGFRGLNV---TIPFKEAALPLLDELSPRARLIGAVNTL 93 (283)
T ss_pred CHHHH--HHHHHH-CCCCCEEEEEECC-HHHHHHHHHHHHHCCCCEEEE---CCCCHHHHHHHHHCCCHHHHHHCCCEEE
T ss_conf 88999--999998-1998567776359-899999999987448871698---7756888999874489989971871489
Q ss_pred CCCCCC--CCHHHHHHHHHHHHHHHHC--CCHHHCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCC
Q ss_conf 216877--2189999999999999709--882241178742542567899999981988575899955960307873326
Q gi|254780137|r 173 FLHDDQ--HGTAVTVTAATLNGMKLVG--KKFSDIKIVTLGAGAAALACLNLLVTMGVRRENIWVYDLEGLVYEGREKKF 248 (779)
Q Consensus 173 vf~DD~--qGTa~v~lA~llnAl~~~g--k~l~~~~iv~~GaGaAg~~~a~ll~~~g~~~~~i~~~D~~Gli~~~r~~~~ 248 (779)
T Consensus 94 ~~~~~g~l~G~NT-D~~G~~~~L~~~~~~~~~~~~~vlilGAGGAarAv~~aL~~~g~~--~i~V~NR----t~~ra--- 163 (283)
T COG0169 94 VREDDGKLRGYNT-DGIGFLRALKEFGLPVDVTGKRVLILGAGGAARAVAFALAEAGAK--RITVVNR----TRERA--- 163 (283)
T ss_pred EECCCCEEEEECC-CHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCC--EEEEEEC----CHHHH---
T ss_conf 9766997999747-889999999850777566788899989768999999999986998--7999958----88999---
Q ss_pred CHHHHHHHHCCC------CCCHHHHCCCCCEEEECCCCCCCCHH-----HHHHCCCCCEEEEE-CCCCCCCCH--HHHHH
Q ss_conf 678897745088------98888860588378625788778988-----99721899779991-787200998--89985
Q gi|254780137|r 249 DKWKSVYAQKSG------PKPLSETMNNADVFLGLSVAGALDPA-----ILKFMAEKPLIMVL-ANPNPEAMP--DEIKK 314 (779)
Q Consensus 249 ~~~~~~~a~~~~------~~~l~ea~~~adv~iG~S~~g~~t~e-----~v~~M~~~PiIfaL-sNP~pEi~p--~~a~~ 314 (779)
T Consensus 164 ~~La~~~~~~~~~~~~~~~~~~~-~~~~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~--~TplL~~A~~ 240 (283)
T COG0169 164 EELADLFGELGAAVEAAALADLE-GLEEADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPL--ETPLLREARA 240 (283)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCC-CCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCC--CCHHHHHHHH
T ss_conf 99999864505631102455412-35545789978878777887888886776686778998111887--8889999998
Q ss_pred HCCCEEECCCC
Q ss_conf 18987980588
Q gi|254780137|r 315 VRPDAMICTGR 325 (779)
Q Consensus 315 ~~g~aivatGr 325 (779)
T Consensus 241 -~G~~-~idGl 249 (283)
T COG0169 241 -QGAK-TIDGL 249 (283)
T ss_pred -CCCC-EECCH
T ss_conf -5990-78739