HHsearch alignment for GI: 254780137 and conserved domain: PRK00141

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=94.59  E-value=0.28  Score=27.84  Aligned_cols=85  Identities=15%  Similarity=0.215  Sum_probs=50.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHCCCCCCHHHHCCCCCEEEECCCCCCC
Q ss_conf             17874254256789999998198857589995596030787332667889774508898888860588378625788778
Q gi|254780137|r  204 KIVTLGAGAAALACLNLLVTMGVRRENIWVYDLEGLVYEGREKKFDKWKSVYAQKSGPKPLSETMNNADVFLGLSVAGAL  283 (779)
Q Consensus       204 ~iv~~GaGaAg~~~a~ll~~~g~~~~~i~~~D~~Gli~~~r~~~~~~~~~~~a~~~~~~~l~ea~~~adv~iG~S~~g~~  283 (779)
T Consensus        19 kvlV~GlG~SG~s~a~~L~~~G~---~v~~~D~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~d~vV~SPGI~~~   89 (476)
T PRK00141         19 RVLVAGAGVSGLGIAKMLSELGC---DVVVADDNET---QR---HMLIEVVDVADISTAQASDALDSYSIVVTSPGWRPD   89 (476)
T ss_pred             CEEEEEECHHHHHHHHHHHHCCC---EEEEEECCCC---HH---HHHHHHCCCCEECCCCHHHHHCCCCEEEECCCCCCC
T ss_conf             88999227889999999997899---7999989987---03---578874798565155306564689999989978997


Q ss_pred             CHHHHHHCCCC-CEE
Q ss_conf             98899721899-779
Q gi|254780137|r  284 DPAILKFMAEK-PLI  297 (779)
Q Consensus       284 t~e~v~~M~~~-PiI  297 (779)
T Consensus        90 ~p~l~~a~~~gi~vi  104 (476)
T PRK00141         90 SPLLVDAQSAGLEVI  104 (476)
T ss_pred             CHHHHHHHHCCCCEE
T ss_conf             999999998799577