HHsearch alignment for GI: 254780137 and conserved domain: PRK01438

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=92.82  E-value=0.6  Score=25.57  Aligned_cols=89  Identities=10%  Similarity=0.156  Sum_probs=49.0

Q ss_pred             CHHHCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHCC----CC-CCHHHHCCCCCE
Q ss_conf             8224117874254256789999998198857589995596030787332667889774508----89-888886058837
Q gi|254780137|r  199 KFSDIKIVTLGAGAAALACLNLLVTMGVRRENIWVYDLEGLVYEGREKKFDKWKSVYAQKS----GP-KPLSETMNNADV  273 (779)
Q Consensus       199 ~l~~~~iv~~GaGaAg~~~a~ll~~~g~~~~~i~~~D~~Gli~~~r~~~~~~~~~~~a~~~----~~-~~l~ea~~~adv  273 (779)
T Consensus        11 ~~~gk~v~V~GlG~sG~s~a~~L~~~G~---~v~~~D~~-------~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~d~   80 (481)
T PRK01438         11 DWSGLRVVVAGLGVSGFPAADALHELGA---SVTVVADG-------DDDRSRERAALLEVLGATVRLGDGETTLPEGTEL   80 (481)
T ss_pred             HCCCCEEEEEEECHHHHHHHHHHHHCCC---EEEEEECC-------CCCCCHHHHHHHHHCCCEEEECCCHHHHHCCCCE
T ss_conf             7189989999575889999999996799---89999799-------8744868999888549889968875666248999


Q ss_pred             EEECCCCCCCCHHHHHHCCCC-CEE
Q ss_conf             862578877898899721899-779
Q gi|254780137|r  274 FLGLSVAGALDPAILKFMAEK-PLI  297 (779)
Q Consensus       274 ~iG~S~~g~~t~e~v~~M~~~-PiI  297 (779)
T Consensus        81 vV~SPGI~~~~p~~~~a~~~gi~i~  105 (481)
T PRK01438         81 VVTSPGWRPTHPLLAAAAEAGIPVW  105 (481)
T ss_pred             EEECCCCCCCCHHHHHHHHCCCCEE
T ss_conf             9989978998999999998699386