HHsearch alignment for GI: 254780137 and conserved domain: PRK12548
>PRK12548 shikimate 5-dehydrogenase; Provisional.
Probab=95.97 E-value=0.017 Score=36.23 Aligned_cols=184 Identities=21% Similarity=0.319 Sum_probs=95.1
Q ss_pred ECCCCEECCC-CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH-CCCCCEEEHHHCCCCHH---H
Q ss_conf 8178500254-22051058300100899998626985265423889889999999870-88846062220648015---7
Q gi|254780137|r 85 VSNGSAVLGL-GDIGPLASKPVMEGKAVLFKKFAGINVFDIEINAKDVDTMVSTIVAL-EPTFGGINLEDIKAPEC---F 159 (779)
Q Consensus 85 vtdGt~vLGL-GdiG~~a~~pvmeGK~~L~k~~agid~~~i~~~~~d~~e~i~~v~~~-~p~fg~i~lEDi~~p~~---f 159 (779)
T Consensus 5 i~~~T~~~gviG~PI~hSlSP~ih--n~~~~~-~gi~~~Y~~~~v-~~~~l~~~~~~~~~~~~~G~nV---TiP~K~~v~ 77 (289)
T PRK12548 5 ISGTTGLLGLIGTPVGHSKSPAMY--NYSFQK-AGLDYAYLAFDV-PKEKVADAITAIRTFNMRGANV---TMPCKSEVA 77 (289)
T ss_pred CCCCCEEEEEECCCCCCCCCHHHH--HHHHHH-CCCCCEEEEEEC-CHHHHHHHHHHHHHCCCCEEEE---CHHHHHHHH
T ss_conf 288614999978880102249999--999998-699929997877-8889999999887479988997---261399999
Q ss_pred HHHHHHHH------HHCCCCCCCC-CCC--HHHHHHHHHHHHHHHHCCCHHHCEEEEECCCHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999998------7189421687-721--89999999999999709882241178742542567899999981988575
Q gi|254780137|r 160 EVERILSQ------KLKIPFLHDD-QHG--TAVTVTAATLNGMKLVGKKFSDIKIVTLGAGAAALACLNLLVTMGVRREN 230 (779)
Q Consensus 160 ~i~~~l~~------~~~ipvf~DD-~qG--Ta~v~lA~llnAl~~~gk~l~~~~iv~~GaGaAg~~~a~ll~~~g~~~~~ 230 (779)
T Consensus 78 ~~~d~l~~~A~~iGAvNTi~~~~g~l~G~NTD---~~Gf~~~L~~~~~~~~~k~vlIlGaGGaa~ai~~~l~~~g~~--~ 152 (289)
T PRK12548 78 KLMDELSPAARIIGAVNTIVNDDGKLTGHITD---GLGFVRNLREHGVDVKGKKLTIIGAGGAATAIQVQCALDGAK--E 152 (289)
T ss_pred HHHCCCCHHHHHHCCEEEEECCCCEEEEECCC---HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCC--E
T ss_conf 97564998899840524777339989987587---799999999809996777479995216799999999976998--8
Q ss_pred EEEEECCCEEECCCCC-CCCHHHHHHHH-------CCCCCCHHHHCCCCCEEEECCCCC
Q ss_conf 8999559603078733-26678897745-------088988888605883786257887
Q gi|254780137|r 231 IWVYDLEGLVYEGREK-KFDKWKSVYAQ-------KSGPKPLSETMNNADVFLGLSVAG 281 (779)
Q Consensus 231 i~~~D~~Gli~~~r~~-~~~~~~~~~a~-------~~~~~~l~ea~~~adv~iG~S~~g 281 (779)
T Consensus 153 i~i~nr~~~~~~-ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliINaT~~G 210 (289)
T PRK12548 153 ITIFNIKDDFYE-RAEQTVAKIKEEVPACIVHVYDLNDTEKLNAEIATSDILVNATLVG 210 (289)
T ss_pred EEEEECCCHHHH-HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCEEEECCCCC
T ss_conf 999968814889-9999999998458776479851431666655432267445335656