HHsearch alignment for GI: 254780137 and conserved domain: PRK12549
>PRK12549 shikimate 5-dehydrogenase; Reviewed.
Probab=96.09 E-value=0.031 Score=34.48 Aligned_cols=157 Identities=20% Similarity=0.338 Sum_probs=88.0
Q ss_pred HHHHHCCCCE----EEEE---CCCCCHHHHHHHHHHHCCCCCEEEHHHCCCCH---HHHHHHHHHHH------HCCCCCC
Q ss_conf 9986269852----6542---38898899999998708884606222064801---57999999987------1894216
Q gi|254780137|r 112 LFKKFAGINV----FDIE---INAKDVDTMVSTIVALEPTFGGINLEDIKAPE---CFEVERILSQK------LKIPFLH 175 (779)
Q Consensus 112 L~k~~agid~----~~i~---~~~~d~~e~i~~v~~~~p~fg~i~lEDi~~p~---~f~i~~~l~~~------~~ipvf~ 175 (779)
T Consensus 27 ~~~~-lgl~~~Y~~~d~~~~~~~~~~l~~~~~~~~~~--~~~G~nV---TiP~K~~~~~~~d~l~~~A~~igAvNTi~~~ 100 (284)
T PRK12549 27 EGDA-QGLRYVYRLIDLDALGLSADALPELLDAAERM--GFNGLNI---THPCKQAVIPLLDELSDDARALGAVNTVVFR 100 (284)
T ss_pred HHHH-CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHC--CCCEEEE---CCCCHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_conf 9998-79980999753212139978999999998768--9988998---1174999999970523789985652148975
Q ss_pred CC-CCCHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCC-CHHHH
Q ss_conf 87-72189999999999999709882241178742542567899999981988575899955960307873326-67889
Q gi|254780137|r 176 DD-QHGTAVTVTAATLNGMKLVGKKFSDIKIVTLGAGAAALACLNLLVTMGVRRENIWVYDLEGLVYEGREKKF-DKWKS 253 (779)
Q Consensus 176 DD-~qGTa~v~lA~llnAl~~~gk~l~~~~iv~~GaGaAg~~~a~ll~~~g~~~~~i~~~D~~Gli~~~r~~~~-~~~~~ 253 (779)
T Consensus 101 ~g~l~G~N-TD~~G~~~~l~~~~~~~~~~~vlilGaGGaa~ai~~al~~~g~~--~i~I~nR----~~~r~~~l~~~l~~ 173 (284)
T PRK12549 101 DGRRIGHN-TDWSGFAEGFRRGLPDASLERVVQLGAGGAGAAVAHALLTLGVE--RLTLFDV----DPARAQALADELNA 173 (284)
T ss_pred CCEEEEEE-CCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCC--EEEEEEC----CHHHHHHHHHHHHH
T ss_conf 99899980-66688999999746453557189965661689999999976999--8999979----88999999999986
Q ss_pred HHH--HCCCCCCHHHHCCCCCEEEECCCCC
Q ss_conf 774--5088988888605883786257887
Q gi|254780137|r 254 VYA--QKSGPKPLSETMNNADVFLGLSVAG 281 (779)
Q Consensus 254 ~~a--~~~~~~~l~ea~~~adv~iG~S~~g 281 (779)
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~d~iINaTp~G 203 (284)
T PRK12549 174 RFPAARVTAGSDLAAALAAADGLVHATPTG 203 (284)
T ss_pred HCCCCEEEECHHHHHHHHHCCEEEECCCCC
T ss_conf 579863764167676542138266578988