HHsearch alignment for GI: 254780137 and conserved domain: cd00300

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=92.68  E-value=0.62  Score=25.45  Aligned_cols=118  Identities=17%  Similarity=0.204  Sum_probs=67.6

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHCCC-CCCHHHHCCCCCEEEECCC----
Q ss_conf             78742542567899999981988575899955960307873326678897745088-9888886058837862578----
Q gi|254780137|r  205 IVTLGAGAAALACLNLLVTMGVRRENIWVYDLEGLVYEGREKKFDKWKSVYAQKSG-PKPLSETMNNADVFLGLSV----  279 (779)
Q Consensus       205 iv~~GaGaAg~~~a~ll~~~g~~~~~i~~~D~~Gli~~~r~~~~~~~~~~~a~~~~-~~~l~ea~~~adv~iG~S~----  279 (779)
T Consensus         1 V~IIGaG~VG~~~A~~l~~~~l~~-el~L~Di~~~~a~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~daDvvVitaG~~rk   79 (300)
T cd00300           1 ITIIGAGNVGAAVAFALIAKGLAS-ELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGDYADAADADIVVITAGAPRK   79 (300)
T ss_pred             CEEECCCHHHHHHHHHHHHCCCCC-EEEEECCCCCCCHHHHHHHHHCCCCCCCCEEECCCCHHHHCCCCEEEECCCCCCC
T ss_conf             989896889999999998679988-7999818998115688887725634688539827988996799999987898999


Q ss_pred             CCCCC------------HHHHHHC---CCCCEEEEECCCCCCCCHHHHHHH--CCCEEECCC
Q ss_conf             87789------------8899721---899779991787200998899851--898798058
Q gi|254780137|r  280 AGALD------------PAILKFM---AEKPLIMVLANPNPEAMPDEIKKV--RPDAMICTG  324 (779)
Q Consensus       280 ~g~~t------------~e~v~~M---~~~PiIfaLsNP~pEi~p~~a~~~--~g~aivatG  324 (779)
T Consensus        80 pg~-tR~dll~~Na~I~k~i~~~i~~~~p~~ivivvtNPvDv~t~~~~k~sg~p~~rviG~g  140 (300)
T cd00300          80 PGE-TRLDLINRNAPILRSVITNLKKYGPDAIILVVSNPVDILTYVAQKLSGLPKNRVIGSG  140 (300)
T ss_pred             CCC-CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHEEECC
T ss_conf             799-8899999888999999999984199718998579669999999996198844287536