HHsearch alignment for GI: 254780137 and conserved domain: pfam00056
>pfam00056 Ldh_1_N lactate/malate dehydrogenase, NAD binding domain. L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate. The enzyme participates in the citric acid cycle. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. N-terminus (this family) is a Rossmann NAD-binding fold. C-terminus is an unusual alpha+beta fold.
Probab=92.71 E-value=0.4 Score=26.79 Aligned_cols=109 Identities=19% Similarity=0.216 Sum_probs=64.9
Q ss_pred CEEEEECCC-HHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHCC--CCCCHHHHCCCCCEEEECCC
Q ss_conf 117874254-256789999998198857589995596030787332667889774508--89888886058837862578
Q gi|254780137|r 203 IKIVTLGAG-AAALACLNLLVTMGVRRENIWVYDLEGLVYEGREKKFDKWKSVYAQKS--GPKPLSETMNNADVFLGLSV 279 (779)
Q Consensus 203 ~~iv~~GaG-aAg~~~a~ll~~~g~~~~~i~~~D~~Gli~~~r~~~~~~~~~~~a~~~--~~~~l~ea~~~adv~iG~S~ 279 (779)
T Consensus 1 mKV~IIGagg~VG~~~A~~l~~~~l~~-elvL~D~~~~~a~g~alDl~~~~-~~~~~~~~~~~~~~~~~~daDiVVitaG 78 (142)
T pfam00056 1 VKVAVVGAGGGVGSSLAFALALQGLAD-ELVLVDINKDKAEGVAMDLSHGS-TFLSVPGIVGGDDYEALKDADVVVITAG 78 (142)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCC-EEEEECCCCCCCHHHHHHHHCCC-CCCCCCEEECCCCHHHHCCCCEEEEECC
T ss_conf 989998987789999999997479663-47885057764117999986144-3478876974883888378999998157
Q ss_pred ----CCCC-------CHHHHH-------HCCCCCEEEEECCCCCCCCHHHHH
Q ss_conf ----8778-------988997-------218997799917872009988998
Q gi|254780137|r 280 ----AGAL-------DPAILK-------FMAEKPLIMVLANPNPEAMPDEIK 313 (779)
Q Consensus 280 ----~g~~-------t~e~v~-------~M~~~PiIfaLsNP~pEi~p~~a~ 313 (779)
T Consensus 79 ~~~k~g~~R~dll~~Na~I~~~i~~~i~~~~p~~ivivvtNPvDvmt~~~~~ 130 (142)
T pfam00056 79 VPRKPGMTRLDLLNRNAGIFKDIVPAIAKSAPDAIVLVVSNPVDILTYIAWK 130 (142)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH
T ss_conf 7789998778999974699999999999769981999945946889999999