HHsearch alignment for GI: 254780137 and conserved domain: pfam01488

>pfam01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.
Probab=97.67  E-value=0.00012  Score=51.08  Aligned_cols=97  Identities=15%  Similarity=0.239  Sum_probs=72.6

Q ss_pred             CHHHCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHH----CCCCCCHHHHCCCCCEE
Q ss_conf             82241178742542567899999981988575899955960307873326678897745----08898888860588378
Q gi|254780137|r  199 KFSDIKIVTLGAGAAALACLNLLVTMGVRRENIWVYDLEGLVYEGREKKFDKWKSVYAQ----KSGPKPLSETMNNADVF  274 (779)
Q Consensus       199 ~l~~~~iv~~GaGaAg~~~a~ll~~~g~~~~~i~~~D~~Gli~~~r~~~~~~~~~~~a~----~~~~~~l~ea~~~adv~  274 (779)
T Consensus         9 ~l~~~~vlVIGaG~~~~~~~~~L~~~g~~--~i~v~nR----t~~ka---~~la~~~~~~~~~~~~~~~l~~~l~~~Div   79 (134)
T pfam01488         9 DLKGKKVLLIGAGEMARLAAKHLLSKGAK--KITIANR----TLEKA---KELAEEFGGEEVEALPLDELEELLAEADIV   79 (134)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCC--EEEEECC----CHHHH---HHHHHHCCCCCEEEEECHHHHHHHHHCCEE
T ss_conf             81489899999609999999999975998--8999547----57899---999998499725898513544136319999


Q ss_pred             EECCC-C-CCCCHHHHHHCCCCCEEEEECCCC
Q ss_conf             62578-8-778988997218997799917872
Q gi|254780137|r  275 LGLSV-A-GALDPAILKFMAEKPLIMVLANPN  304 (779)
Q Consensus       275 iG~S~-~-g~~t~e~v~~M~~~PiIfaLsNP~  304 (779)
T Consensus        80 I~aT~s~~~ii~~~~~~~~~~~~~iiDLavPr  111 (134)
T pfam01488        80 ISATSAPTPIITKEMVEEALKGLLFVDIAVPR  111 (134)
T ss_pred             EEECCCCCCEECHHHHHHCCCCEEEEEECCCC
T ss_conf             99259997364899997443985999834788