HHsearch alignment for GI: 254780137 and conserved domain: pfam03949
>pfam03949 Malic_M Malic enzyme, NAD binding domain.
Probab=100.00 E-value=0 Score=524.85 Aligned_cols=223 Identities=47% Similarity=0.686 Sum_probs=206.4
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCHHHHHHHHHHHHCCC----C----CCCEEEEECCCEEECCCCCCCC
Q ss_conf 7218999999999999970988224117874254256789999998198----8----5758999559603078733266
Q gi|254780137|r 178 QHGTAVTVTAATLNGMKLVGKKFSDIKIVTLGAGAAALACLNLLVTMGV----R----RENIWVYDLEGLVYEGREKKFD 249 (779)
Q Consensus 178 ~qGTa~v~lA~llnAl~~~gk~l~~~~iv~~GaGaAg~~~a~ll~~~g~----~----~~~i~~~D~~Gli~~~r~~~~~ 249 (779)
T Consensus 1 IqGTa~V~lAgll~alk~~g~~l~d~riv~~GAGsAg~gia~~l~~~~~~~G~~~~eA~~~i~~~D~~Gll~~~r~-~l~ 79 (255)
T pfam03949 1 IQGTAAVVLAGLLNALKITGKPLSDQKIVFFGAGAAGIGIAELLVAAMVREGLSEEEARKNIWMVDRKGLLTEGRE-DLN 79 (255)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHCCEEEECCCCEEECCCC-CCH
T ss_conf 9489999999999999982998778289997978899999999999998769997887365899759774558998-855
Q ss_pred HHHHHHHHCCCC----CCHHHHCCCC--CEEEECCC-CCCCCHHHHHHCCC---CCEEEEECCCCC--CCCHHHHH-HHC
Q ss_conf 788977450889----8888860588--37862578-87789889972189---977999178720--09988998-518
Q gi|254780137|r 250 KWKSVYAQKSGP----KPLSETMNNA--DVFLGLSV-AGALDPAILKFMAE---KPLIMVLANPNP--EAMPDEIK-KVR 316 (779)
Q Consensus 250 ~~~~~~a~~~~~----~~l~ea~~~a--dv~iG~S~-~g~~t~e~v~~M~~---~PiIfaLsNP~p--Ei~p~~a~-~~~ 316 (779)
T Consensus 80 ~~k~~~a~~~~~~~~~~~L~e~v~~~kP~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~~peda~~~t~ 159 (255)
T pfam03949 80 PFKKPFARKTNEVKGWGTLAEAVKGAKPDVLIGVSGVPGVFTEEIVRAMAEHTERPIIFALSNPTPKAEITPEEAYKWTA 159 (255)
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHCC
T ss_conf 99999975376555669999998626887799816888988999999998169998487668989877779899998549
Q ss_pred CCEEECCC----------CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC
Q ss_conf 98798058----------87887743503455665456751373002678999999999987203313667741387676
Q gi|254780137|r 317 PDAMICTG----------RSDFSNQVNNVLCFPYIFRGALDCGATAITEEMKVAAARAMAVLVRDVPPDVVFDNFAKESP 386 (779)
Q Consensus 317 g~aivatG----------rs~~pnQ~NN~l~FPgif~Gal~~~A~~Itd~M~~aAa~alA~la~~~~~~~~~~~~~~~~~ 386 (779)
T Consensus 160 G~ai~ATGSpf~pv~~~Gr~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aAA~aLA~~v~~~~------------- 226 (255)
T pfam03949 160 GRALFATGSPFPPVELNGRSDYPNQVNNVLIFPGIGLGALDVRARRITDEMFLAAAEALAELVTEEE------------- 226 (255)
T ss_pred CEEEEEECCCCCCEEECCEEECCCCCCCEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC-------------
T ss_conf 9289985898776000885861577620103532567889717877899999999999985078112-------------
Q ss_pred CCCCCCCCCCCCCHH-HHHHHHHHHHHHHH
Q ss_conf 667522366654677-86798888999874
Q gi|254780137|r 387 VFGPNYLIPSPFDPN-LISYIAPAVAKAAE 415 (779)
Q Consensus 387 ~~g~~yiiP~~fd~r-~~~~va~AVa~aA~ 415 (779)
T Consensus 227 -l~~~~i~P~~~~~r~vs~~VA~aV~~~Ai 255 (255)
T pfam03949 227 -LGEGYIIPPLFDIREVSPRVAVAVAKAAV 255 (255)
T ss_pred -CCCCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf -88874649987487879999999999649