HHsearch alignment of GI: 254780138 and MMDB domain: 1h4x_A_
>1h4x_A (A:) SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus}
Probab=97.95 E-value=5.1e-05 Score=53.36 Aligned_cols=87 Identities=17% Similarity=0.278 Sum_probs=72.1
Q ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHH---HCCCCCCCCCCCHHHH
Q ss_conf 5882799984035635522007999986431167880899701051521299999999997---5187643158991269
Q gi|254780138|r 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KYHGKIKLQGVSTHIE 79 (373)
Q Consensus 3 ~dG~~vL~LsGdWTl~~l~~l~~~l~~~L~~~~~~~~i~iDls~i~~lDTAGA~lL~~l~~---~~~~~~~~~~l~~~~~ 79 (373)
+++..+++++|+++..+.....+.+.+.+... ..+.+++|++++.++|++|...|.++.+ +.+.+....+.+|..+
T Consensus 9 ~~~v~vi~i~G~L~~~~~~~~~~~l~~~~~~~-~~~~vilD~s~v~~iDssg~~~L~~~~~~~~~~g~~v~l~~~~~~~~ 87 (117)
T 1h4x_A 9 TRETVVIRLFGELDHHAVEQIRAKISTAIFQG-AVTTIIWNFERLSFMDXSGVGLVLGRMRELEAVAGRTILLNPSPTMR 87 (117)
T ss_dssp ETTEEEEEEEEEECHHHHHHHHHHHHHHHHHT-SCSEEEEEEEEEEEECTHHHHHHHHHHHHHHTTTCEEEEESCCHHHH
T ss_pred CCCEEEEEEEEEEEHHHHHHHHHHHHHHHHCC-CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHH
T ss_conf 09899999988998789899999999999649-99789999769885187999999999999996799899993998999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99998864222
Q gi|254780138|r 80 QLFSLISFTHR 90 (373)
Q Consensus 80 ~Ll~Ll~~~~~ 90 (373)
+.++.......
T Consensus 88 ~~l~~~~~~~~ 98 (117)
T 1h4x_A 88 KVFQFSGLGPW 98 (117)
T ss_dssp HHHHHTTCGGG
T ss_pred HHHHHCCCCEE
T ss_conf 99998199867