HHsearch alignment of GI: 254780138 and MMDB domain: 1th8_B_
>1th8_B (B:) Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus}
Probab=98.11 E-value=1.7e-05 Score=56.68 Aligned_cols=88 Identities=16% Similarity=0.320 Sum_probs=73.8
Q ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHH---HCCCCCCCCCCCHHHH
Q ss_conf 5882799984035635522007999986431167880899701051521299999999997---5187643158991269
Q gi|254780138|r 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KYHGKIKLQGVSTHIE 79 (373)
Q Consensus 3 ~dG~~vL~LsGdWTl~~l~~l~~~l~~~L~~~~~~~~i~iDls~i~~lDTAGA~lL~~l~~---~~~~~~~~~~l~~~~~ 79 (373)
+++..+++++|+++..+...+.+.+.+.+... +.+.+++|+++++.+|++|...|.++.+ +.+.+..+.++++..+
T Consensus 10 ~~~~~vi~~~g~L~~~~~~~~~~~l~~~~~~~-~~~~vilDls~v~~iDssg~~~L~~~~~~~~~~g~~l~l~~~~~~v~ 88 (116)
T 1th8_B 10 KQDVLIVRLSGELDHHTAEELREQVTDVLENR-AIRHIVLNLGQLTFMDSSGLGVILGRYKQIKNVGGQMVVCAVSPAVK 88 (116)
T ss_dssp ETTEEEEEEEEEESHHHHHHHHHHHHHHHHSS-CCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHTTCCEEEESCCHHHH
T ss_pred ECCEEEEEEEEEEEHHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHH
T ss_conf 89999999999998799999999999999608-99689999779862387999999999999996899899997899999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999988642220
Q gi|254780138|r 80 QLFSLISFTHRK 91 (373)
Q Consensus 80 ~Ll~Ll~~~~~~ 91 (373)
+.++.......-
T Consensus 89 ~~l~~~~~~~~~ 100 (116)
T 1th8_B 89 RLFDMSGLFKII 100 (116)
T ss_dssp HHHHHHTGGGTS
T ss_pred HHHHHCCCCCEE
T ss_conf 999980999704