HHsearch results for GI: 254780138 and protein with PDBid: 1sbo_A
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A
Probab=98.03 E-value=2.2e-05 Score=54.80 Aligned_cols=86 Identities=15% Similarity=0.324 Sum_probs=71.7
Q ss_pred CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHH---HCCCCCCCCCCCHHH
Q ss_conf 85882799984035635522007999986431167880899701051521299999999997---518764315899126
Q gi|254780138|r 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KYHGKIKLQGVSTHI 78 (373)
Q Consensus 2 s~dG~~vL~LsGdWTl~~l~~l~~~l~~~L~~~~~~~~i~iDls~i~~lDTAGA~lL~~l~~---~~~~~~~~~~l~~~~ 78 (373)
.+++..+++++|+.+..+...+.+.+.+.+... ..+.+++|+++++++||+|...|..+.+ +.+.+....+.++..
T Consensus 10 ~~~~~~ii~l~G~l~~~~a~~l~~~l~~~~~~~-~~~~vvlD~~~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~~v 88 (110)
T 1sbo_A 10 EQDDKAIVRVQGDIDAYNSSELKEQLRNFISTT-SKKKIVLDLSSVSYMDSAGLGTLVVILKDAKINGKEFILSSLKESI 88 (110)
T ss_dssp ECSSEEEEEEESCBSTTTTTHHHHHHHTHHHHC-SCSEEEEECTTCCCBCHHHHHHHHHHHHHHHHTTCEEEEESCCHHH
T ss_pred EECCEEEEEEEEEEEHHHHHHHHHHHHHHHHCC-CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf 999999999999999689899999999998538-9978999946998736279999999999999789989999299899
Q ss_pred HHHHHHHHHH
Q ss_conf 9999988642
Q gi|254780138|r 79 EQLFSLISFT 88 (373)
Q Consensus 79 ~~Ll~Ll~~~ 88 (373)
+++++.....
T Consensus 89 ~~~l~~~gl~ 98 (110)
T 1sbo_A 89 SRILKLTHLD 98 (110)
T ss_dssp HHHHHHTTCG
T ss_pred HHHHHHCCCC
T ss_conf 9999984998