HHsearch results for GI: 254780138 and protein with PDBid: 1th8_B
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A
Probab=98.04 E-value=2.6e-05 Score=54.41 Aligned_cols=86 Identities=16% Similarity=0.345 Sum_probs=72.5
Q ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHH---HCCCCCCCCCCCHHHH
Q ss_conf 5882799984035635522007999986431167880899701051521299999999997---5187643158991269
Q gi|254780138|r 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KYHGKIKLQGVSTHIE 79 (373)
Q Consensus 3 ~dG~~vL~LsGdWTl~~l~~l~~~l~~~L~~~~~~~~i~iDls~i~~lDTAGA~lL~~l~~---~~~~~~~~~~l~~~~~ 79 (373)
+|+..++++.|+.+..+..++++.+.+.+... ..+.+++|+++++++||+|...|.++.+ +.+.+..+.+.++..+
T Consensus 10 ~~~v~vv~l~G~l~~~~~~~l~~~l~~~~~~~-~~~~liiDl~~v~~idssgl~~L~~~~~~~~~~g~~l~l~~~~~~v~ 88 (116)
T 1th8_B 10 KQDVLIVRLSGELDHHTAEELREQVTDVLENR-AIRHIVLNLGQLTFMDSSGLGVILGRYKQIKNVGGQMVVCAVSPAVK 88 (116)
T ss_dssp ETTEEEEEEEEEESHHHHHHHHHHHHHHHHSS-CCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHTTCCEEEESCCHHHH
T ss_pred ECCEEEEEEEEEEEHHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCEECHHHHHHHHHHHHHHHHCCCEEEEEECCHHHH
T ss_conf 89999999999999899999999999999718-99699999569835167999999999999995899899996898999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999886422
Q gi|254780138|r 80 QLFSLISFTH 89 (373)
Q Consensus 80 ~Ll~Ll~~~~ 89 (373)
+.++......
T Consensus 89 ~~l~~~gl~~ 98 (116)
T 1th8_B 89 RLFDMSGLFK 98 (116)
T ss_dssp HHHHHHTGGG
T ss_pred HHHHHCCCCC
T ss_conf 9999839977