HHsearch results for GI: 254780138 and protein with PDBid: 2ka5_A

>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural genomics, PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A*
Probab=97.87  E-value=3.5e-05  Score=53.42  Aligned_cols=86  Identities=13%  Similarity=0.178  Sum_probs=70.0

Q ss_pred             CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHH---HCCCCCCCCCCCHHHH
Q ss_conf             5882799984035635522007999986431167880899701051521299999999997---5187643158991269
Q gi|254780138|r    3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KYHGKIKLQGVSTHIE   79 (373)
Q Consensus         3 ~dG~~vL~LsGdWTl~~l~~l~~~l~~~L~~~~~~~~i~iDls~i~~lDTAGA~lL~~l~~---~~~~~~~~~~l~~~~~   79 (373)
                      .|+..+++++|+++..+.....+.+...+... ..+.+++|+++++++||+|...|.++.+   +.+.+..+.+.++..+
T Consensus        19 ~d~v~vl~~~g~Ld~~~a~~f~~~l~~~~~~~-~~~~vilDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~~v~   97 (125)
T 2ka5_A           19 VDDVVILMPNKELNIENAHLFKKWVFDEFLNK-GYNKIFLVLSDVESIDSFSLGVIVNILKSISSSGGFFALVSPNEKVE   97 (125)
T ss_dssp             CSSCEEECCCSCCSGGGTHHHHHHHHHHTTTT-TCCEEEEECTTCSCCCHHHHHHHHHHHHHHHHHTCEEEEECCCHHHH
T ss_pred             ECCEEEEEEEEEEEHHHHHHHHHHHHHHHHHC-CCCEEEEECCCCCEECHHHHHHHHHHHHHHHHCCCEEEEECCCHHHH
T ss_conf             99999999741886889999999999999966-99889998479972776899999999999997799999957998999


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999886422
Q gi|254780138|r   80 QLFSLISFTH   89 (373)
Q Consensus        80 ~Ll~Ll~~~~   89 (373)
                      +.++......
T Consensus        98 ~~l~~~gl~~  107 (125)
T 2ka5_A           98 RVLSLTNLDR  107 (125)
T ss_dssp             HHHHHTTSTT
T ss_pred             HHHHHCCCCC
T ss_conf             9999819986