HHsearch results for GI: 254780138 and protein with PDBid: 2ka5_A
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural genomics, PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A*
Probab=97.87 E-value=3.5e-05 Score=53.42 Aligned_cols=86 Identities=13% Similarity=0.178 Sum_probs=70.0
Q ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHH---HCCCCCCCCCCCHHHH
Q ss_conf 5882799984035635522007999986431167880899701051521299999999997---5187643158991269
Q gi|254780138|r 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KYHGKIKLQGVSTHIE 79 (373)
Q Consensus 3 ~dG~~vL~LsGdWTl~~l~~l~~~l~~~L~~~~~~~~i~iDls~i~~lDTAGA~lL~~l~~---~~~~~~~~~~l~~~~~ 79 (373)
.|+..+++++|+++..+.....+.+...+... ..+.+++|+++++++||+|...|.++.+ +.+.+..+.+.++..+
T Consensus 19 ~d~v~vl~~~g~Ld~~~a~~f~~~l~~~~~~~-~~~~vilDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~~v~ 97 (125)
T 2ka5_A 19 VDDVVILMPNKELNIENAHLFKKWVFDEFLNK-GYNKIFLVLSDVESIDSFSLGVIVNILKSISSSGGFFALVSPNEKVE 97 (125)
T ss_dssp CSSCEEECCCSCCSGGGTHHHHHHHHHHTTTT-TCCEEEEECTTCSCCCHHHHHHHHHHHHHHHHHTCEEEEECCCHHHH
T ss_pred ECCEEEEEEEEEEEHHHHHHHHHHHHHHHHHC-CCCEEEEECCCCCEECHHHHHHHHHHHHHHHHCCCEEEEECCCHHHH
T ss_conf 99999999741886889999999999999966-99889998479972776899999999999997799999957998999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999886422
Q gi|254780138|r 80 QLFSLISFTH 89 (373)
Q Consensus 80 ~Ll~Ll~~~~ 89 (373)
+.++......
T Consensus 98 ~~l~~~gl~~ 107 (125)
T 2ka5_A 98 RVLSLTNLDR 107 (125)
T ss_dssp HHHHHTTSTT
T ss_pred HHHHHCCCCC
T ss_conf 9999819986