HHsearch results for GI: 254780138 and protein with PDBid: 3llo_A
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus}
Probab=96.89 E-value=0.0022 Score=40.88 Aligned_cols=85 Identities=14% Similarity=0.203 Sum_probs=65.6
Q ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHH--CCCCCEEEEEECCCHHHHHHHHHHHHHHHH---HCCCCCCCCCCCHH
Q ss_conf 5882799984035635522007999986431--167880899701051521299999999997---51876431589912
Q gi|254780138|r 3 ENGITVFRFAGNWKSPEISEIADDVVMAINK--SIQSDSAIVDLSAITEIDTIGAELIMYFME---KYHGKIKLQGVSTH 77 (373)
Q Consensus 3 ~dG~~vL~LsGdWTl~~l~~l~~~l~~~L~~--~~~~~~i~iDls~i~~lDTAGA~lL~~l~~---~~~~~~~~~~l~~~ 77 (373)
-.|.+++++.|+..-.+.....+++.+.... .+..+.+++|+++++.+|++|+..|.++.+ +.+.+..+.++++.
T Consensus 28 ~p~v~I~r~~g~L~F~na~~~~~~i~~~~~~~~~~~~k~vVld~~~v~~iD~tg~~~L~~l~~~l~~~gi~l~la~~~~~ 107 (143)
T 3llo_A 28 IPGIKIFQINAPIYYANSDLYSSALKRKTGVNGSENIHTVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQ 107 (143)
T ss_dssp CTTEEEEEECSCHHHHHHHHHHHC-----------CCSEEEEECTTCCCCCHHHHHHHHHHHHHHHTTTCEEEEESCCHH
T ss_pred CCCEEEEECCCCCEECCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf 69999998489857712288888876664202579825999996689858879999999999999977999999809879
Q ss_pred HHHHHHHHHH
Q ss_conf 6999998864
Q gi|254780138|r 78 IEQLFSLISF 87 (373)
Q Consensus 78 ~~~Ll~Ll~~ 87 (373)
..+.++....
T Consensus 108 v~~~l~~~g~ 117 (143)
T 3llo_A 108 VVNDLTSNRF 117 (143)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHHCCC
T ss_conf 9999998799