HHSEARCH alignment of GI: 254780138 and SCOP domain: d1th8b_

Alignment
>d1th8b_ c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa {Bacillus stearothermophilus [TaxId: 1422]}
Probab=98.04  E-value=1.4e-05  Score=54.47  Aligned_cols=86  Identities=16%  Similarity=0.345  Sum_probs=72.3

Q ss_pred             CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHH---HCCCCCCCCCCCHHHH
Q ss_conf             5882799984035635522007999986431167880899701051521299999999997---5187643158991269
Q gi|254780138|r    3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KYHGKIKLQGVSTHIE   79 (373)
Q Consensus         3 ~dG~~vL~LsGdWTl~~l~~l~~~l~~~L~~~~~~~~i~iDls~i~~lDTAGA~lL~~l~~---~~~~~~~~~~l~~~~~   79 (373)
                      +|+..++++.|+++..+...+.+.+.+.+... +.+.+++|+++++++|++|+..|.++.+   +.+.+....+.++..+
T Consensus         9 ~~~v~vv~l~G~L~~~~~~~~~~~l~~~~~~~-~~~~iilDls~v~~iDssg~~~L~~~~~~~~~~g~~l~l~~~~~~v~   87 (115)
T d1th8b_           9 KQDVLIVRLSGELDHHTAEELREQVTDVLENR-AIRHIVLNLGQLTFMDSSGLGVILGRYKQIKNVGGQMVVCAVSPAVK   87 (115)
T ss_dssp             ETTEEEEEEEEEESHHHHHHHHHHHHHHHHSS-CCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHTTCCEEEESCCHHHH
T ss_pred             ECCEEEEEEEEEEEHHHHHHHHHHHHHHHHCC-CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHH
T ss_conf             89999999989999799999999999998518-99799999878987887999999999999996899899997899999


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999886422
Q gi|254780138|r   80 QLFSLISFTH   89 (373)
Q Consensus        80 ~Ll~Ll~~~~   89 (373)
                      +.++......
T Consensus        88 ~~l~~~gl~~   97 (115)
T d1th8b_          88 RLFDMSGLFK   97 (115)
T ss_dssp             HHHHHHTGGG
T ss_pred             HHHHHCCCCC
T ss_conf             9999849986


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: SpoIIaa-like
family: Anti-sigma factor antagonist SpoIIaa
domain: Anti-sigma factor antagonist SpoIIaa
species: Bacillus stearothermophilus [TaxId: 1422]